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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NC_018518 Bordetella pertussis 18323, complete genome 4 crisprs csa3,DEDDh,DinG,cas3 0 0 26 0

Results visualization

1. NC_018518
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_018518_1 229293-229402 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_018518_2 1433395-1433489 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_018518_3 1817101-1817228 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_018518_4 3721135-3721228 Orphan NA
1 spacers
DEDDh

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 27238 : 78099 45 Planktothrix_phage(40.0%) tRNA,transposase NA
DBSCAN-SWA_2 83099 : 143991 51 Pseudomonas_phage(25.0%) terminase,transposase NA
DBSCAN-SWA_3 148249 : 198089 48 Escherichia_phage(22.22%) transposase NA
DBSCAN-SWA_4 260740 : 319266 53 Acinetobacter_phage(30.0%) transposase NA
DBSCAN-SWA_5 406980 : 480675 58 Acanthamoeba_polyphaga_mimivirus(16.67%) tRNA,transposase,protease NA
DBSCAN-SWA_6 530436 : 601265 60 Bacillus_phage(44.44%) transposase NA
DBSCAN-SWA_7 631417 : 691206 57 Staphylococcus_phage(16.67%) transposase NA
DBSCAN-SWA_8 700852 : 768120 47 uncultured_Mediterranean_phage(25.0%) holin,transposase,protease NA
DBSCAN-SWA_9 791110 : 852694 51 Vibrio_phage(12.5%) holin,transposase NA
DBSCAN-SWA_10 1345965 : 1414957 56 Klosneuvirus(10.0%) transposase NA
DBSCAN-SWA_11 1434359 : 1567380 108 Erysipelothrix_phage(25.0%) transposase NA
DBSCAN-SWA_12 1579546 : 1641321 53 Streptococcus_phage(16.67%) transposase NA
DBSCAN-SWA_13 1680386 : 1726340 31 Paramecium_bursaria_Chlorella_virus(50.0%) tRNA,transposase NA
DBSCAN-SWA_14 1741326 : 1794133 46 Yersinia_phage(10.0%) tRNA,transposase NA
DBSCAN-SWA_15 1797444 : 1921418 107 Klosneuvirus(13.33%) tRNA,transposase,protease NA
DBSCAN-SWA_16 2286082 : 2403204 102 uncultured_Caudovirales_phage(15.0%) tRNA,transposase NA
DBSCAN-SWA_17 2444113 : 2518892 60 Catovirus(22.22%) tRNA,transposase NA
DBSCAN-SWA_18 2695426 : 2755140 53 uncultured_Mediterranean_phage(60.0%) tRNA,holin,transposase NA
DBSCAN-SWA_19 2847506 : 2906655 54 Staphylococcus_phage(11.11%) transposase,protease NA
DBSCAN-SWA_20 2949900 : 3013056 58 Paramecium_bursaria_Chlorella_virus(15.38%) transposase NA
DBSCAN-SWA_21 3187124 : 3252743 51 Klebsiella_phage(16.67%) transposase,protease NA
DBSCAN-SWA_22 3294362 : 3333146 32 Acinetobacter_phage(25.0%) tRNA,transposase NA
DBSCAN-SWA_23 3349452 : 3390135 40 Bacillus_virus(16.67%) transposase NA
DBSCAN-SWA_24 3457282 : 3542389 81 Planktothrix_phage(15.38%) tRNA,holin,transposase,protease NA
DBSCAN-SWA_25 3605188 : 3659551 52 Flavobacterium_phage(16.67%) tRNA,transposase NA
DBSCAN-SWA_26 3663872 : 3720374 48 Diachasmimorpha_longicaudata_entomopoxvirus(14.29%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage