Overview of predicted results
Overview of the results
| Contig_ID | Contig_def | CRISPR array number | Contig Signature genes | Self targeting spacer number | Target MGE spacer number | Prophage number | Anti-CRISPR protein number |
|---|---|---|---|---|---|---|---|
| NC_019560 | Helicobacter pylori Aklavik117, complete sequence | 5 crisprs | cas2,cas14j,c2c9_V-U4,DEDDh | 2 | 0 | 0 | 0 |
| NC_019561 | Helicobacter pylori Aklavik117 plasmid p1HPAKL117, complete sequence | 0 crisprs | NA | 0 | 0 | 0 | 0 |
| NC_019562 | Helicobacter pylori Aklavik117 plasmid p2HPAKL117, complete sequence | 0 crisprs | NA | 0 | 0 | 0 | 0 |
1. NC_019560
Click the left colored region to show detailed information
0
| CRISPR_ID | CRISPR_location | CRISPR_type | Repeat_type | Spacer_info | Cas_protein_info | CRISPR-Cas_info | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NC_019560_1 | 65123-65269 | Orphan |
NA
Consensus repeat of NC_019560_1
|
1 spacers
spacers of NC_019560_1
>1.1|65168|57|NC_019560|CRISPRCasFinder AAGCTTTAGAGGTGGAGCTAACGCCTTGTCTAGCGAAGAATTAGAACGCATGGCAAG |
CRISPR arrays and Neighbor proteins around NC_019560_1
The CRISPR arrays of NC_019560_1 >merge|NC_019560|1|65123-65269|CRISPRCasFinder TTTTAGAGAGCAAGAGTTTGAAAAGAATTTAGAGGATTTGATGCCAAGCTTTAGAGGTGGAGCTAACGCCTTGTCTAGCGAAGAATTAGAACGCATGGCAAGTTTTAGAGAGCAAGAATTTGAAAAGAATTTAGAGGATTTGATGCC >NC_019560|1|1|65123-65269|CRISPRCasFinder TTTTAGAGAGCAAGAGTTTGAAAAGAATTTAGAGGATTTGATGCC AAGCTTTAGAGGTGGAGCTAACGCCTTGTCTAGCGAAGAATTAGAACGCATGGCAAG TTTTAGAGAGCAAGAATTTGAAAAGAATTTAGAGGATTTGATGCC
>NC_019560.1|WP_015085325.1|63655_63916_+|hypothetical-protein MSKVQMDTEEVREFVNHLERFKELLNDEVNGLSSHFNNLDSWQDARRDKFSEVLDNLKNTFNEFDEAAQEQIAWLKERIRVLEEDY >NC_019560.1|WP_015085323.1|60627_63081_+|hypothetical-protein MVTPLKSLRLPIGHPLVEILCKLPLKKDKDKDKPASNEESPVNFKKEVSEENKIKFKQALRVFHAIVNNEASLRYLSDENKKFIEDLAQAEKITNELVEKTLEIVSYSDVDVDFEAFNDAMLKVDEIAVGLKSYSQSQLLDLNGGHWDLEVPSSSKESVTFRFDNLPKDHNGREENFYARSSLKDLDKTGIVAIDFGTKSTTAIYMNKNGRYFPISIGGDVDTDDLKKYENPTIVEFRNKEKFLKDYNALNHRPFTEHNDMEVAYEAQKGFESAQGNHLYRFFSKLKQWAGADEKQNFRDFKEDFSLESFAHCTDFNPIEIYAYYIGRCINNMHNGVFLKYFLSYPIKYEKHQAEKIRESFEKGLKKSLPRHVFDDDKTAKMFKVELRASEPCAYAISALKSYGFHKSAKLDKPIYYGVFDFGGGTTDFDFGKWEKSTNPKSAYKMTHFSSGGDKYLGGENLLEWLAFEAYGQNFQTLKEKDIVIAKPNYDRINEQRFGSFMQQSREARLNLQTIASKLRPFLEKLDAHIVEAIEENEEFEIGDLKKDFSKITLFDRNGNDIPEIEFKMDYKELLNLLKSKIDDGVANFFAGFSKVMAENIDNQCRAFHIFLGGNASKSVLVKQAFENAKEKELKAYKQRTSKDDFTFILYEPLGTEESDKQILELTGEDASKAWGGHEKPTCKTGVAFGLLESRNKAGGIEMPSIDANPVFKYDLGVEKEGNFHAKISRDSLKLNEYQIFQTKEEWGGFDGLEIRYSDKPIANTNTLSIHDTQLIFIALEEHEEVDVKVCCVDSQSIKVGLFKDDQLIYESEVEKL >NC_019560.1|WP_015085322.1|60304_60616_+|hypothetical-protein MSYSDDEFVGVSQKEMNELKNFQQVLKNENAELTEKIKALSTERDELIASHTDKSELDLQNRRFKSAIEDLKRQNRKLEEENMALKERVDGLKEQLSKQLKPQ >NC_019560.1|WP_015085321.1|59361_60315_+|hypothetical-protein MGTFIEKCFGFYQVREELEARISELEDENENLTDENTRLLASKEWLTKENENLAVKISELENSNDQLWQAREKLKTENAELLREKDNLAKENTRLLASKEWLTTEKIELIETNQNLAKANTELTKANADLTEKNQKLTTEKIELIETNQKLTKEKTELTEKNKTLTKEKDNLTKANADLKTEKDKINHQVIALTKEQDSLKQERAQLQDAHGFLEELCANLEKDNQHLTDKLKKLESAQKNLENSNNQLLQAKEKIAEEKIELEREMARLKSLESTDKSELDLQNRRFKSAIEDLKRQNRKLEEENMALKERVGDVI >NC_019560.1|WP_080115150.1|58532_59360_+|hypothetical-protein MKSLEQSQQVLENEKAELTNKITDLSKEKENLTKEKENLAKEKDNLTTDLSNAKSQVIQANQEKDKLADKNKELDAQVGLLKGQIKSLEQSQQALKNEKDELLREKDNLTTEKDNLTKEKTELTEKNQKLTTEKAELEQKHAPYKKLERLYEVFLEVKGCLNYGFVEKTHSAVDLIASVLGDSKYYLEELYKKASQELSDKKSDKGEKLAELFDLLFEYVKDNKFERLKEPSAYDSTCKKLYPEQNTSQKMQRVVLIGYTYDKKTTYYTIVDMGS >NC_019560.1|WP_015085319.1|57522_57729_+|hypothetical-protein MKTIKNGIMIGTLGALLLSGCSSFDTQRLACLPKDHSPKDASKKEAQYTPKGFFDPYSSSLNHWDSTF >NC_019560.1|WP_015085318.1|53636_57194_-|aldehyde-dehydrogenase-family-protein MQKIIDDSLELAKKLQDSISNHLSEQEKAFHSKMQKLLNNPENKVMLIELMDRSFRCLDNKARFEMIEHVLDKYKSREIFSSFEKLLLMGFLSFGKMLPDMSVPFFVNKIRSDTKAMVLDQEESQLKERILKRKNEKIILNVNFIGEEVLGEEEANARFEKYSQALKSNYIQYISIKITTIFSQINILDFEYSKKEIVKRLDALYALALEEEKKQGMPKFINLDMEEFRDLELTVESFMESIAKFDLNAGIVLQAYIPDSYEYLKKLHAFSKERVLKGLKPIKIRFVKGANMESEETIASVKDWALPTFSNKQDTDSNYNKMLDFVLEGDNYKYIHIGAASHNIFEIAYVYTRIHALNDPVVLEHFSFEMLEGMSLQASQELKEMHKLILYAPVCDEAHFNNAIAYLVRRLDENTSSDNFMKAFFNLKVGTIEWKDQEQRFLNSLKGIATLDNATHRTQDRNAKQNAHTTYPNHSFKNESDTDFILKANREWAKKVREKMHNAPILELYPEMDGRFEDPNLTPLEVFDKIHHKKIASVHLADREAILKALEVAKSDKSRFSQKSFIEIHALMSQTAQIFRERRGDLIGISALEVGKTFAETDAEVSEAIDFLEFYPYSLRVLQEQNKKTKFTPKGVGVIIAPWNFPVGISVGTIAAPLAAGNRVIYKPSSLSSVTGYKLCECFWDAGVPRDALIYLPSKGSDISEHLLKDESIKFAILTGGEDTAYKMLEANPTLALSAETGGKNATIVSKMADRDQAIKNVIHSAFSNSGQKCSATSLLVLEKEVYEDENFKKTLIDATLSLSVGDPFDFKNKIGALADKPNEKVIKAIDELKSYENYEIPVSFVNDNPYLMRPSIKYGTKKGDFTHQTELFTPILSVMKAQDLDEAIEIVNSTGYGLTSALESLDEREWEYYLERIEAGNIYINKPTTGAIVLRQPFGGVKKSAVGFGRKVGIFNYITQFVNIYQEEEDENALKNPLSEALEGLTQKGYDEHTHELRRAIFMAKSYAYHYKHEFSQAKDYVKIRGEDNLFSYTKVKSVGYRITEKDTLSDMLGVALACLISQIPLTISIENEQANKDLSFFLECLKALRANAPIVYESLQKFSEKLNAFNRVRYLKSDLDLLHKQASALGIVLATAKPCLNGRFELLYYHLERSVSISYHRYGNLGSRVLRQPTCHKSCCAEK >NC_019560.1|WP_015085317.1|52110_53610_-|sodium/proline-symporter-PutP MGHVVLSTPIVTMFVVYSLLMLYIGFYFYKQNETTEDYFLGDRSMGPIISALSAGASDMSGWLLMGLPGALYVGGLINSHIAIGLSLGALINWVFVAKRLRIYTSVIANSITISDYFETRFSDDKHILRLISAFVILIFFIFYISSGLVSGAKLFEATFGIQYTYALSIGTLIIVSYTFLGGYKAVCWTDLIQGLLMMSALIVVPVVMIIHLGGIGEGIKIIREIKPENLSFLQGSSIVAIISSLAWGLGYFGQPHILVRFMSIRSIKDVPKATTIGISWMVISLIGACVMGLLGVAYAHKFDLSLEDPEKIFIVMSQLLFNPWITGILLSAILAAVMSTASSQLLVSSSTIAEDFYATIFNKDAPQKLVMVISRLSVLGVACIAFFISTDRNASILSIVSYAWAGFGASFGSVILFSLFWSRMTRIGAIAGMLSGASTVILYDKFGKSFLDIYEIVPGFIVASIAIVVFSLFSSVRAGTKEAFETMLKEIKEIESLKY >NC_019560.1|WP_015085315.1|50963_51746_-|type-II-restriction-enzyme MNYWTKLSIEYANQRSYLDDLFQVYPTIPEGLREIDSKIWSNIEYHFKQKDNLALITELLNLDLFPIKDSYIAYLKRDKSALERNPRTINRICGRLYEMGLNKIFEKCSEPKETNRQIGPMFKDWLNNKSLGVEPVDLNDFIANENDAILRASDNIMAEFAKSHLNYHHHKGLDFVARFNKKYIIGEAKFLTDFGGHQNAQFNDAISTIEVPNIKAIKVAILDGVLYIESNNKMRKLLDTTYRNYNIMSALVLREFLYQI >NC_019560.1|WP_041199973.1|49922_50954_-|site-specific-DNA-methyltransferase MQNLLIQAENAIALLFLLNDKNLKGKIDLIYIDPPFATNNHFTITNGRATTISNSKNGDIAYSDKVVGMDFIEFLKQRLVLLKELLSEQGSIYVHTDCKIGHYVKVMLDEIFGIQNFRNEITRIKCNPKNFKRMGYGNIKDMILFYSKGKNPIFNEPKIPYTPQDLEKRFPKIDKDKRRYTTVPIHAPGEVGSGECSKAFKGMLPPKGRHWRTDVATLERWDKEGLIEYSNNNNPRKKIYALEQVGKRVQDIWEFKDPQYPSYPTEKNAQLLDLIIKTSSNKDSIVLDCFCGSGTTLKSAFLLQRKFIGIDNSCLAIQACKNKFETITKDLFISQNFYDFLVF >NC_019560.1|WP_015085326.1|65863_66289_+|SMI1/KNR4-family-protein METIPTNSELNWEFVEPLNENALSGLEDQLKMGLSDAFKDFIKRSNYGFNQWRSFMVGNKSYTFKHVLNFNLEGKGLLIDFMQSLKEWLEPEEIIFANDGYGGYYLLNTASGVVLFLDTDDGSKHALLHLKMFLKKLESNG >NC_019560.1|WP_015085327.1|66290_66641_+|hypothetical-protein MFSHKVYLEGCTLELRKICDDFTENAMQDDLGQKIRDEVLEDMLKIAHDLENLEQDAQSQRRRIDEQIEEAKSLMKKIDMNFHSQSEIDKLVREAKEHEKEANRRYDEYLKSKDKE >NC_019560.1|WP_015085330.1|69142_69928_-|urease-accessory-protein-UreD MNTYAQESKLRLKTKIGADGRCVIEDNFFTPPFKLMAPFYPKDDLAEIMLLAVSPGMMRGDAQDMQLNIGPNCKLRITSQSFEKIHNTEDGFASRDMHIVVGENAFLDFAPFPLIPFENAHFKGNTTISLHSSSQLLYSEIIVAGRVARNELFQFNRLHTKISILQDEKPIYYDNTILDPKTTDMNNMCMFDGYTHYLNLVLVNCPIELSGVRECLEESQGVDGAVSEIASSHLCMKALAKGSEPLLHLREKIARSITQKI >NC_019560.1|WP_015085331.1|69927_70527_-|urease-accessory-protein-UreG MVKIGVCGPVGSGKTALIEALTRHMSKDYDMAVITNDIYTKEDAEFMCKNSVMPRDRIIGVETGGCPHTAIREDASMNLEAVEEMQGRFPNLELLLIESGGDNLSATFNPELADFTIFVIDVAEGDKIPRKGGPGITRSDLLVINKIDLAPYVGADLKVMERDSKKMRGEKPFIFTNIRAKEGLDDVIAWIKRNALLED >NC_019560.1|WP_080115151.1|70555_71275_-|urease-accessory-protein-UreF MPKKTLKADDNAHVDNEFLILQVNDAVFPIGSYTHSFGLETYIQQKKVTNKESALEYLKANLSSQFLYTEMLSLKLTYESALQQDLKKILGVEEIIMLSTSPMELRLANQKLGNRFIKTLQAMNELDMGDFFNAYAQKTKDPTHATSYGVFTASLGIELKKALRHYLYAQTSNMVINCVKSVPLSQNDGQKILLSLQSPFNQLIEKTLELDESHLCAASVQNDIKAMQHESLYSRLYMS >NC_019560.1|WP_015085333.1|71330_71843_-|urease-accessory-protein-UreE MIIERLIGNLRDLNPLDFSVDYVDLEWFETRKKIARFKTRQGKDIAVRLKDAPKLGLSQGDILFKEEKEIIAVNILDSQVIHIQAKSVAEVAKICYEIGNRHAALYYGESQFEFKTPFEKPTLALLEKLGVQNRVLSSKLDSKDRLTVSMPHSEPNFKVSLANDFKVVMK >NC_019560.1|WP_015085334.1|71844_72432_-|acid-activated-urea-channel MLGLVLLYVGIVLISNGICGLTKVDPKSTAVMNFFVGGLSIVCNVVVITYSALHPTAPVEGAEDIVQVSHHLTSFYGPATGLLFGFTYLYAAINHTFGLDWRPYSWYSLFVAINTIPAAILSHYSDMLDDHKVLGITEGDWWAIIWLAWGVLWLTAFIENILKIPLGKFTPWLAIIEGILTAWIPAWLLFIQHWV >NC_019560.1|WP_000724295.1|72624_74334_-|urease-subunit-beta MKKISRKEYVSMYGPTTGDKVRLGDTDLIAEVEHDYTIYGEELKFGGGKTLREGMSQSNNPSKEELDLIITNALIVDYTGIYKADIGIKDGKIAGIGKGGNKDMQDGVKNNLSVGPATEALAGEGLIVTAGGIDTHIHFISPQQIPTAFASGVTTMIGGGTGPADGTNATTITPGRRNLKWMLRAAEEYSMNLGFLAKGNASNDASLADQIEAGAIGFKIHEDWGTTPSAINHALDVADKYDVQVAIHTDTLNEAGCVEDTMAAIAGRTMHTFHTEGAGGGHAPDIIKVAGEHNILPASTNPTIPFTVNTEAEHMDMLMVCHHLDKSIKEDVQFADSRIRPQTIAAEDTLHDMGIFSITSSDSQAMGRVGEVITRTWQTADKNKKEFGRLKEEKGDNDNFRIKRYLSKYTINPAIAHGISEYVGSVEVGKVADLVLWSPAFFGVKPNMIIKGGFIALSQMGDANASIPTPQPVYYREMFAHHGKAKYDANITFVSQAAYDKGIKEELGLERQVLPVKNCRNITKKDMQFNDTTAHIEVNPETYHVFVDGKEVTSKPANKVSLAQLFSIF >NC_019560.1|WP_000779229.1|74337_75054_-|urease-subunit-alpha MKLTPKELDKLMLHYAGELARKRKEKGIKLNYVEAVALISAHIMEEARAGKKSAAELMQEGRTLLKPDDVMDGVASMIHEVGIEAMFPDGTKLVTVHTPIEANGKLVPGELFLKNEDITINEGKKAVSVKVKNVGDRPVQIGSHFHFFEVNRCLDFDREKTFGKRLDIASGTAVRFEPGEEKSVELIDIGGNRRIFGFNALVDRQADNESKKIALHRAKERGFHGAKSDDNYVKTIKE >NC_019560.1|WP_000921401.1|75410_75884_-|lipoprotein-signal-peptidase MLKTTQKSLLVFIGVFFLIFGADQAIKYAILEGFRYESLIIDIVLVFNKGVAFSLLSFLEGGLKYLQILLILGLFIFLMRQKELFKNHAIEFGMVFGAGVSNVLDRFVHGGVVDYVYYHYGFDFAIFNFADVMIDVGVGVLLLRQFFFKQKQNKIKA |
You can click texts colored in the table to view more detailed information
Click the colored protein region to show detailed information
| CRISPR_ID | CRISPR_location | CRISPR_type | Repeat_type | Spacer_info | Cas_protein_info | CRISPR-Cas_info | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NC_019560_2 | 126338-126570 | Orphan |
NA
Consensus repeat of NC_019560_2
|
3 spacers
spacers of NC_019560_2
>2.1|126370|43|NC_019560|CRT TTTAATGAAATCTTTCTGTTCTTTAATCAAATCTCTTTGTGTA >2.2|126445|31|NC_019560|CRT TATTTGACTATTAGCGAGTTCTATCTCACTC >2.3|126508|31|NC_019560|CRT CTGTCTTTGCTGTTCTAACTCTATCCCACTC |
CRISPR arrays and Neighbor proteins around NC_019560_2
The CRISPR arrays of NC_019560_2 >merge|NC_019560|2|126338-126570|CRT CTATGATTTTCTTGGCAATTTTGTTCTGTTTCTTTAATGAAATCTTTCTGTTCTTTAATCAAATCTCTTTGTGTATTAATTGTCTTTTGTTTTTCTTGTTCTGCTTTTATTTGACTATTAGCGAGTTCTATCTCACTCTTATTTGTCTTTTGTTTTTCTTGTTCTGTTTTCTGTCTTTGCTGTTCTAACTCTATCCCACTCTTATTTGTCTTTTGTTTTTCTTGTTCTGTTTT >NC_019560|2|1|126338-126570|CRT CTATGATTTTCTTGGCAATTTTGTTCTGTTTC TTTAATGAAATCTTTCTGTTCTTTAATCAAATCTCTTTGTGTA TTAATTGTCTTTTGTTTTTCTTGTTCTGCTTT TATTTGACTATTAGCGAGTTCTATCTCACTC TTATTTGTCTTTTGTTTTTCTTGTTCTGTTTT CTGTCTTTGCTGTTCTAACTCTATCCCACTC TTATTTGTCTTTTGTTTTTCTTGTTCTGTTTT
>NC_019560.1|WP_015085369.1|124745_125681_+|radical-SAM-protein MAKENPPIVFGPVLSRRFGKSLGVDLSPSKKQCNYNCIYCELGKAKPIERMEEVIKVKTLISAIQNALNNLTTPIDVLTITANGEPTLYPHLLELIQSIKPFLKGVKTLILSNGSLFYEPKVQQALKEFDIVKFSLDAIDLKAFERVDKPYSKDIDKILEGILSFSQIYQGQLVAEVLLIKGVNDSANNLRFIADFLKKINTARVDLSTIDRPSSFKAPKLSEDELLKCSLFFEGLCVSLPKRTATQADQAKKLISCGIDELLALISRRPLSAEEAPLILDSNAFKHLETLLNHKQITIKKVGSLEFYCAF >NC_019560.1|WP_015085368.1|122542_124753_+|type-I-DNA-topoisomerase MKHLIIVESPAKAKTIKNFLDKNYEVIASKGHVRDLSKFALGIKIDETGFTPNYVVDKDHKELVKQIIELSKKASTTYIATDEDREGEAIGYHVACLIGGKLESYPRIVFHEITQNAILNALKTPRQIDMSKVNAQQARRFLDRIVGFKLSSLISSKITKGLSAGRVQSAALKLVIDREREIKAFKPLTYFTLDAYFEPHLEAQLISYKGNKLKAQELIDEKKAQEIKNELEKESYTISSIIKKSKKSPTPPPFMTSTLQQSASSLLGFSPTKTMSIAQKLYEGVATPQGVMGVITYMRTDSLNIAKEALEEARNKILKDYGKDYLPSKAKVYSSKNKNAQEAHEAIRPTSIILEPNALKDYLKPEELKLYTLIYKRFLASQMQDALFESQSVVVACEKGEFKASGRKLLFDGYYKILGNDDKDKLLPNLKENDPIKLEKLESNAHVTEPPARYSEASLIKVLESLGIGRPSTYAPTISLLQHRDYIKVEKKQISALESAFKVIEILEKHFEEIVDSKFSASLEEELDNIAQNKADYQQVLKDFYYPFMDKIEAGKKNIISQKVHEKTGQSCPKCGGELVKKNSRYGEFVACNNYPKCKYVKQTENANDGSNQESCEKCGGEMVQKFSRNGAFLACNNYPECKNTKSLKNTPNANEIIEGVKCPECGGDIALKRSRKGSFYGCNNYPKCNFLSNHKPINKRCEKCHYLMSERTYRKKKAHECIQCKERVFLEEDDG >NC_019560.1|WP_000010021.1|120832_122377_-|flagellin-B MSFRINTNIAALTSHAVGVQNNRDLSSSLEKLSSGLRINKAADDSSGMAIADSLRSQSANLGQAIRNANDAIGMVQTADKAMDEQIKILDTIKTKAVQAAQDGQTLESRRALQSDIQRLLEELDNIANTTSFNGQQMLSGSFSNKEFQIGAYSNTTVKASIGSTSSDKIGHVRMETSSFSGEGMLASAAAQNLTEVGLNFKQVNGVNDYKIETVRISTSAGTGIGALSEIINRFSNTLGVRASYNVMATGGTPVQSGTVRELTINGVEIGTVNDVHKNDADGRLTNAINSVKDRTGVEASLDIQGRINLHSIDGRAISVHAASASGQVFGGGNFAGISGTQHAVIGRLTLTRTDARDIIVSGVNFSHVGFHSAQGVAEYTVNLRAVRGIFDANVASAAGANANGAQAETNSQGIGAGVTSLKGAMIVMDMADSARTQLDKIRSDMGSVQMELVTTINNISVTQVNVKAAESQIRDVDFAEESANFSKYNILAQSGSFAMAQANAVQQNVLRLLQ >NC_019560.1|WP_015085367.1|118885_120769_-|motility-associated-factor-glycosyltransferase-family-protein MDIYQKNLQALFKKDPLLFAQLKAIKENKKYEVFLGNDSANFNLLDKETNTPLFEKSPLDSSLELYKNSEIYMLYPYLYYFGLGNGVFYRLLLGNGNLKRLVVIEPEIEVIFIVLNLLDFSTEILENRLILLHADFCNYNMIASLFDMDKKSRLYARMYDLKLFNAYYERYSHQMIEINQHFTRALEHGAISVGNDAKDALIGIKQHAANLPEVIKSPSLVDFVSALKNRDTAIIVSTGPSLNKQLPLLKEIAPYATLFCIDASFPILAKAGIKPDIVLSLERVDLTAKFYEETPLDFQEGVIFALTSIVHKRLIQAIKKGVKQFSFRPFGYTNLFGLHQYGYVGIGMSAANMAYELVVHSRFKRCVFIGQDLSFSQSGNSHASGAIYGDREIKPKKDKDKIFTEKYGGNGEVETTLVWKLFLEFFEKDIFNTPYKLEVINATEGGARIKGTKEMPFKEVCEKIDKSKPKPPINLTYPTQSEQAKNLRIAKQKCEEIIKYASEKKTQVEEVFLKVAPFLEEVEKLHEEKKLEELDFKALENLSAEIDNIKELFDDKRFNSYFMDAIQSYIFHQELHIAEIVCKKTNNEDELRAKQLEYIYAHKYWLFSLAGGIDCVIEAIKMALKEW >NC_019560.1|WP_015085366.1|118565_118862_+|hypothetical-protein MTINTHYTPNFTQLQTLNNINNDATIKDRNQVEQDLQQSNIQDGFSQDNTQNAPDFDRLQALNTINNDGEIKDKSQVEKSLADGENIPEIYSSLDTYA >NC_019560.1|WP_015085365.1|117906_118545_+|hypothetical-protein MPNMNTHTRGIDGNLIHSLKSISLSMFRKGFFGLYQGSISARIGTNQFVINKRNAVFDQLNENTLLVLHDKMDYRWKEASLDSPIHASVYREFLDAKFIAYARPPYSLAYSLRHNRLLPRDYLGYRSLGEEISIFNPKDYDSWQERADTEILRQLQESKKYFVFIKGCGIFAYHRELSKLMEIFDLIENSCKVLRLGDLMDYCYNDDPRLSV >NC_019560.1|WP_015085364.1|116856_117687_-|HrcA-family-transcriptional-regulator MVIDEIFQIMMLKRIKVGSDLNKKESLLDAFVKTYLQILEPISSKRLKELANLKISCATIRNYFQTLSKEGMLYQAHSSGARLPTFKAFENYWQKSLRFEVLRVNEKRLKSASENFGLFTLLKKPSLERLERVIECEKRFLILDFLAFSCTLGYSVKMEKFLLELVGKSVKEVRSIAASVNALSLARQLERLEYSNTQITRFNLMGLKTLLNSPLFFDILGGKVLERLKKPLDFIEPDCMLVTRPIEFQNKRMQLLCVGKLECDYEGFFQTISKEE >NC_019560.1|WP_015085363.1|116290_116857_-|nucleotide-exchange-factor-GrpE MKDEHNQEHDLSQEEPESCKKACNEQQGEEMQEASEKECEIKEDFELKYQEMHEKYLRVHADFENVKKRLERDKSMALEYAYEKIALDLLPVIDALLGAHRSAAEVDKESALTKGLELTMEKLHEVLARHGIEGIECLEEFDPNFHNAIMQVKSEEKENGKIVQVLQQGYKYKGRVLRPAMVSIAKND >NC_019560.1|WP_015085362.1|114397_116260_-|molecular-chaperone-DnaK MGKVIGIDLGTTNSAMAVYEGNEAKIIANKEGKNTTPSIVAFTDKGEILVGESAKRQAVTNPEKTIYSIKRIMGLMFNEDKAKEAEKRLPYKIVDRNGACAIEISGKVYTPQEISAKILMKLKEDAESYLGESVTEAVITVPAYFNDSQRKATKEAGTIAGLNVLRIINEPTSAALAYGLDKKESEKIMVYDLGGGTFDVTVLETGDNVVEVLATGGDAFLGGDDFDNRVIDFLASEFKSETGIEIKNDVMALQRLKEAAENAKKELSSAMETEINLPFITADATGPKHLVKKLTRAKFESLTEDLVEETISKIESVIKDAGLTKNEISEVVMVGGSTRIPKVQERVKAFINKDLNKSVNPDEVVAVGASIQGGVLKGDVKDVLLLDVTPLSLGIETLGGVMTKVIDRGTTIPAKKSQVFSTAEDNQPAVSIMVLQGERDLARDNKSLGKFDLQGIAPAPRGVPQIEVTFDIDANGILTVSAQDKNTGKSQEIKISGSSGLSDSEIEKMVKDAELHKEEDARKKEVIEARNHADSLAHQTQKSLDEHKTNLNENDANEIQNAINALKECIKNDNATKAELEDKTKALAQAAQKLGEAMANKNNAEQPKKKDDDVIDAEVE >NC_019560.1|WP_015085359.1|112496_113411_-|cysteine-synthase-family-protein MIITTMQDAIGRTPVFKFTSKDYPIPTNSAIYAKLEHLNPGGSIKDRLGQYLIEEGFRTGKITSKTTIIEPTAGNTGIALALVAIKHHLKTIFVVPEKFSAEKQQIMRALGAKVINTPTSEGISGAIKKSKELAESIPDSYLPLQFENPDNPAAYYHTLAPEIVQELGVGLKSFVAGIGSGGTFAGTARYLKERIPTIRLIGVEPEGSILNGGEPGPHEIEGIGVEFIPPFFANLDIDGFETISDEEGFSYTRKLAKQNGLLVGSSSGAAFVAALKEAQRLPEGSQVLTIFPDVADRYLSKGIY >NC_019560.1|WP_015085371.1|127089_129528_-|pyruvate,-water-dikinase MRYIKFFKELNNKNVNLVGGKNASIGEMFQELVPIGIKVPDGFAITSEAYWYLLEQGGAKQKIIELLENVDATEIDVLKIRSKQIRELIFGTPFPSDLRDEIFQAYEILSQQYNMKEADVAVRSSATAEDLPDASFAGQQDTYLNIKGKTELIHYIKSCLASLFTDRAISYRASRGFDHLKVALSVGVQKMVRADKGSAGVMFSIDTETGFKDAVFITSAWGLGENVVGGTINPDEFYVFKPTLEQNKRPIIKRQLGNKTQKMVYAPRGSEHPTRNIKTTKKEWQSFSLSDEDVLILAKYAIEIEKHYSKEAKQYRPMDIEWAKDGDSGEIFIVQARPETVQSQKTKEESQVFEKFKFKNPNEKKEIILQGRAIGSKIGSGKVRIINDLEHMNSFKEGEILVTDNTDPDWEPCMKKASAVITNRGGRTCHAAIVAREIGVPAIVGVSGATDSLYTGMEITVSCAEGEEGYVYAGIYEHEIERVELSNMQETQTKIYINIGNPEKAFGFSQLPNHGVGLARMEMIILNQIKAHPLALVDLHHKKSVKEKNEIENLMAGYANPKDFFVRKIAEGIGMISAAFYPKPVIVRTSDFKSNEYMRMLGGSSYEPNEENPMLGYRGASRYYSESYNEAFSWECEALALVREEMGLTNMKVMIPFLRTIEEGKKVLEILRKNNLESGKNGLEIYIMCELPVNVILADDFLSLFDGFSIGSNDLTQLTLGVDRDSELVSHVFDERNEAMLKMFKKAIEACKRHNKYCGICGQAPSDYPEVTEFLVKEGITSISLNPDSVIPTWNAVAKLEKELKDHGLTAH >NC_019560.1|WP_015085372.1|129887_131726_+|threonine--tRNA-ligase MSAELIAVYKDEQIIDLESAKVLGLSDGIKALNGTEPIYFDDSPLALEVIRHSCAHLLAQSLKALYPDAKFFVGPVVEEGFYYDFKTASKISEEDLPKIEAKMKEFAKLKLAITKEVLTREQALERFKGDELKHAVMSKISGDAFGVYQQGEFEDLCKGPHLPNTRFLNHFKLTKLAGAYLGGDENNEMLIRIYGIAFATKEGLKDYLFQIEEAKKRDHRKLGVELGLFSFDDEIGAGLPLWLPKGARLRKRIEDLLSKALLLRGYEPVKGPEILKSDVWKISGHYDNYKENMYFTTIDEQEYGIKPMNCVGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDAHIFCSFEQIQSEVSAILDFTHKIMQAFDFSYEMELSTRPAKSIGDDKVWEKATNALKEALKEHRIDYKIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDMNLPERFKLAFTNEHNHAEQPVMIHRAILGSFERFIAILSEHFGGNFPFFVAPTQIALIPINEEHHVFALKLKEALKKRDIFVEVLDKNDSLNKKVRSAEKQKIPMILVLGNEEVETEILSIRDREKQAQYKMPLKEFLNMVESKMQEVSF >NC_019560.1|WP_000089219.1|131722_132334_+|translation-initiation-factor-IF-3 MSRNEVLLNGDINFKEVRCVGDNGEVYGIISSKEALNIAQNLGLDLVLISASAKPPVCKVMDYNKFRYQNEKKIKEAKKKQKQIEIKEIKLSTQIAQNDINYKVKHAREFIESNKHVKFKVVLKGRESQNSKAGLDVLFRVQTMMQDLANPEKEPKTEGRFVSWMFVPKAKEAPKNEKKTKENNPPFNRINLMKGENHAKNED >NC_019560.1|WP_001125542.1|132314_132509_+|50S-ribosomal-protein-L35 MPKMKTNRGASKRFKVKKNLIKRGSAFKSHILTKKSPKRKANLNAPKHVHHTNAHSVMSLLCRA >NC_019560.1|WP_001264172.1|132604_132955_+|50S-ribosomal-protein-L20 MRVKTGVVRRRRHKKVLKLARGFYSGRRKHFRKAKEQLERSMYYAFRDRKQKKREFRSLWVVRINAACRMHNTSYSRFMHALKVAGVELDRKVLADMAMNDMQAFESVLESVKEHL >NC_019560.1|WP_015085373.1|133154_134015_+|outer-membrane-protein MKKSIIVGAISLAMTSLLSAETPKQEKAIKTSPTKKGERNAAFIGIDYQLGMLSTTAQNCSHGNCNGNQSGAYGSNTPNMPTASNPTGGLTHGALGTRGYKGLSNQQYAINGFGFVVGYKHFFKKSPQFGMRYYGFFDFASSYYKYYTYNDYGMRDARKGSQSFMFGYGAGTDVLFNPAIFNRENLHFGFFVGVAIGGTSWGPTNYYFKDLADEYRGSFHPSNFQVLVNGGIRLGTKHQGFEIGLKIQTIRNNYYTASADNVPEGVTYKFTFHRPYAFYWRYIVSF >NC_019560.1|WP_015085374.1|134368_134800_+|DUF1104-domain-containing-protein MKKLAFSLLFTGTFLGLFLNASDFKSMDNKQLLEQVGKVAPSEVPEFRAEVNKRLKAMKEEERKSYKADFKKAMDKNLASLSQEDRNKRKKEILEVIANKKKTMTMKEYRQEGLDLHDCACEGPFHDHEKKGKKGKKPSHHKH >NC_019560.1|WP_158511581.1|134947_135088_+|hypothetical-protein MLILKSFSCEGHASFLELKFLECLYFLDIYSIIPNNKDPLKACILR >NC_019560.1|WP_015085376.1|135202_136072_+|hypothetical-protein MKRILFFLVATTFLLRAETDSATINTTIDPNVMFSESSTGNVKKDRKRVLKSMVNLEKERVKNFNQYSETKMSKGDLSAFGAFFKGSLESCVEQKVCYYEHKDGKVSFVVNDREKFYKHVLKDLGTELSLPLFNWLYKGSDFGALHEQFGDMYDGYIKYLISMVRVSQKEKARKLDAVTLKKMEDQAEKDTKAAFQKRSSGELESHTDSPEFISSSKKTQNASNPDLDSTTNANALKETASKESEISSKKEKKSKKKRRLSKKERQQQALQQEFERQISDSSKSENIAK >NC_019560.1|WP_015085378.1|137133_138501_-|L-serine-ammonia-lyase MASFSILSIFKIGVGPSSSHTIGPMEAGARFCGLLKGVLEQVVRIQITLHGSLALTGKGHLSDEAVLIGLHGICANELELTTKKALLHEALENKVLKLANQHCIHFDYSKDLIFDNKPLARHQNALILKAFNSKNEVLKEETYYSVGGGFVYTEKELDNLSEEGGNESVAYDFSSAKELLELCQKHQKNIAEIVRLREDALKNRPDAMMAKIYRAMLECYDNGANSKEKYLPGSLRVTRLAPSIKTRLEKHPTSGKDPLALIDYISLYARAIAEENASGGKVVTAPTNGACAVVPSVLLYAKNHLFENLSQKAINDFLLTSAAIGYLYKKNASLSGAEAGCQAEIGVASSMAAGGLACLCQASMQQVLIASEIAMEHHLGLTCDPVGGLVQIPCIERNVLGAIKAISASKLALEDEYKPKVSLDEVIATMYATGKDMNEKYKETSLGGLAKTLKC |
You can click texts colored in the table to view more detailed information
Click the colored protein region to show detailed information
| CRISPR_ID | CRISPR_location | CRISPR_type | Repeat_type | Spacer_info | Cas_protein_info | CRISPR-Cas_info | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NC_019560_3 | 325569-325631 | Orphan |
NA
Consensus repeat of NC_019560_3
|
1 spacers
spacers of NC_019560_3
>3.1|325592|16|NC_019560|CRISPRCasFinder GGTTTCTTCTTGTGGG |
CRISPR arrays and Neighbor proteins around NC_019560_3
The CRISPR arrays of NC_019560_3 >merge|NC_019560|3|325569-325631|CRISPRCasFinder TCTTCTTGGGCTTTTTTTTCTTGGGTTTCTTCTTGTGGGGTTTCTGGGTTTTCTTGTGGGGTT >NC_019560|3|2|325569-325631|CRISPRCasFinder TCTTCTTGGGCTTTTTTTTCTTG GGTTTCTTCTTGTGGG GTTTCTGGGTTTTCTTGTGGGGTT
>NC_019560.1|WP_000551229.1|324645_325266_-|guanylate-kinase MHNDFNLLILSGPSGAGKSTLTKYLQEKIPKTHFSLSTTTRKPREGEVDGLHYNFVSEEEFKQGIEKGQFLEWAIVHNHYYGTSKIPVEKALKEGKIVIFDIDVQGHEILKKHYPNACSVFISTKNQEILKERLLLRGTDSKETIEKRLINAYKEMQCLESFDYLIINEDLEKSKEIILSIAKTLVHRLKAFNFEKICKAWKNESL >NC_019560.1|WP_000508577.1|324335_324575_-|twin-arginine-translocase-TatA/TatE-family-subunit MGGFTSIWHWVIVLLVIVLLFGAKKIPELAKGLGSGIKNFKKAVKDDEEEAKNEPKTLDAQAAQTKVHETSEIKSKQES >NC_019560.1|WP_015085518.1|322707_324333_-|arginine--tRNA-ligase MHTLIKGVLEEILEEEIIIEYPKDREHGHYATPIAFNLAKVFKKSPLVIAEELALKISTHEKTQGLFDSVVACKGYINFTLSLYFLERFTQKALELKEQFGSQPKSEYSQKIFLEFVSANPTGPLHIGHARGAVFGDSLAKIARFLGHEVLCEYYVNDMGSQIRLLGLSVWLAYREHVLKESVTYPEVFYKGEYIIEIAKKANNDLEPSLFKENEETIIEVLSGYAKDLMLLEIKDNLDDLGIHFDSYASEREIFKHKDAVFERLEKANALYEKDSKIWLKSSLYHDESDRVLIKEDKSCTYLAGDIVYHDEKFKQNYTKYINIWGADHHGYIARVKASLEFLGYDSNKLEVLLAQMVRLLKDNEPYKMSKRAGNFILIKDVIDDVGKDALRFIFLSKRLDTHLEFDVNTLKKQDSSNPIYYIHYANSRIHTMLEKSPFSKEEILQTPLTDLNAEEKYLLFSALSLPKIIESSFEEYGLQKMCEYAKTLASEFHRFYNAGKILNTPKAKELLKICLMVSLSLSNAFKLLGIEIKTKISAKD >NC_019560.1|WP_015085517.1|321889_322645_-|HugZ-family-heme-oxygenase MLNRIIEHMNANHVEDMKGLLKKFGQVHHAENVAFKSVDPQGVVIGYNNNQTLRIEFNHEVKDPKDYKNAIIELCQSVEKTHDLKGVEEEVKAFKEGFDSVCLATLHPNGHVVCSYAPLMTDGKQYYIYVSEVAEHFAGLKHNPHNVEVMFLEDESKAKSAILRKRLRYKTNARFIERGAEFDKAFDSFIEKTGGAGGIKTIRAMQDFHLIALDFKEGRFVKGFGQAYDILGDKIAYVGGKGNAHDFAHKK >NC_019560.1|WP_015085516.1|320275_321421_-|YbfB/YjiJ-family-MFS-transporter MRVFVCFLGVFVSNGLARFGYVVLIPLLILSGSLTPHQSFQLGIAVLMGYVFGSFLIQFLSPLMSLESIAKISFGLIALSFLICYFDSIPFFWLWIWRFIAGVASSALMILVAPLSLPYVKENKRALVGGFIFSAVGIGSVFSGFVLPWISSYNIKWAWIFLGGSCLIAFILSLIGLKNHSLRKKSIKKEESAFKIPFHLWLLLISCALNAIGFLPHTLFWVDYLIRHLNISPAIAGTSWALFGFGATLGSLISGPMAQKLGAKNANIFILVLKSIACFLPIFFHQISLLNLSIFIMGAATTANINLFSMMALKIAGAKHFAKASSWVVFSFGIFQALFSYLFTIFLGDLGYLLIFVICGACLVLSFIVLFPIKMQTAINQ >NC_019560.1|WP_015085515.1|319307_320270_+|GTP-binding-protein MPKIPITLITGFLGSGKTSFLSEYLNQTDHQGVALIINEIGQAALDQRILSVQYCGEKMLYLNAGCVCCNKRMDLVESLKATLNNYEWRGEILKRIIIETTGLANPAPILWTILSDTFLGAHFEIQSVVVCVDALNARMHLTNNEAKEQIVFADSILLTKTDLQNDSVALIKLKERLQSINPSAEIFDKKNIHYESFFSRKNRVHRVILPAKDSHSQGFETLSINFEGAMEWSAFGIWLSLLLHKYGTQILRIKGIIDIGSGFLVSINGVMHIIYPPKHILKDQNGSNLVFIMRHLECEKILNSLKGFKDFLGIKGFETQ >NC_019560.1|WP_015085514.1|318939_319308_+|hypothetical-protein MCVLCGELISSFHWTDGTDSYENDENLKGQNALISANENARERKRARLKRVRLLNQILAFYGLKMDDWQGAKFVLCDKKGQSVIVNDLGDLWDKAQNLAKKEMDALDSHLLAFLNQNKNAIH >NC_019560.1|WP_015085513.1|318011_318893_+|polysaccharide-deacetylase MAKEILVAYGVDIDAVAGWLGSYGGEDSPDDISRGLFAGEVGIPRLLKLFKKYHLPATWFAPGHSIETFPEQMKMIVDAGHEVGAHGYSHENPIAMSAKQEEDVLLKSIELIKELTGKAPTGYVAPWWEFSNITNELLLKHGFKYDHSLMHNDFTPYFVRVGDSWSKIDYSLEAKDWMKPLIRGVETDLVEIPANWYLDDLPPMMFIKKSPNSFGFVSPRDIGQMWIDQFDWVYREMDYAVFGMTIHPDVSARPQVLLMHEKIIEHINEHEGVRWVTFNEIADDFLKRSPRKK >NC_019560.1|WP_015085512.1|317114_317999_+|carbon-nitrogen-hydrolase-family-protein MKTKNPAKRILKTAVIQMQSKPYALNENLQLALNLAKEAHNKGTNLIVLPELFDSGYCVNDKDADFGIDLKAIEHGKETLKNESLRALNNFAKSNKVHLVACSIEKTNNKLYDSAYIIPPKGGIVGKHRKIYLWGDEKSRFKRGKKYEIFTLDFGDFSAKVGLQICYEIGFGVGANLLALQGAEVLIYPSAFGKARAYNWDLLSKARALENGCFVCACNHSGEETNTQLKQTLEFAGDSRIIAPNGKIIAQATKLNEVIIAEMDLNEVALQRQKIPYLQDFDTKLTKKGFGKLT >NC_019560.1|WP_000336426.1|316626_317031_+|hypothetical-protein MCQIKCLLILLSINIVSAIIIYFFQAFQGVLNFEGGFLGFFIVALSSYYGVKKRLDLRKQNSGEKEEKQKFQKFALGLEMSFNVWRLGGYGVLLGILGALLFLHLFNGLIFLIGVFVSSLSSVLLRFLNNNGKF >NC_019560.1|WP_000932525.1|326731_327274_+|nuclease MLNKFKKIVGVSVLVGCLGVLQAKNSLFVLPYEQKDALNSLVSGISNARESVKIAIYSFTHRDIARAIKSVASRGIKVQIIYDYESNHNNKQSTIGYLDKYPNTKVCLLKGLKAKNGNYYGIMHQKVAIIDDKIVFLGSANWSKNAFENNYEVLLKTDDTETILKAKSYYQKMLGSCVGF >NC_019560.1|WP_015085520.1|327280_328018_-|outer-membrane-protein MRTLLKMLVGISLLTHALIAKEESAASPWTKNLYMGVNYQTGSINLMTNIHEVREITNYQTGYTNIITSVNSVKKLTNMGSNGIGLVMGYNHFFHPDKMLGLRYFAFLDWQGYGMRYPKGYYGGNNMITYGVGVDAVWNFFQGSFYQDDIGVDIGVFGGIAIAGNSWYIGNKGQELLGITNNRAVDNTSFQFLFNFGLKALFVDEHEFEIGFKFPTINNKYYTTDALKVQMRRVFAFYVGYNYHF >NC_019560.1|WP_015085521.1|328147_328861_+|flagellar-basal-body-L-ring-protein-FlgH MKKALYLGAVAFSVVFSMVSANEPKIDFNPPNYVEETPSKEFIPELNKLGSLFGQGERPLFADRRAMKPNDLITIIVSEKASANYSSSKDYKSASGGNSTPPRLTYNGLDERKKQEAQYLDDKNNYNFTKSSNNTNFKGGGSQKKSEDLEIVLSARIIKVLENGNYFIYGNKEVLVDGEKQILKVSGVIRPYDIERNNTIQSKFLADAKIEYTNLGHLSDSNKKKFAADAMETQMPY >NC_019560.1|WP_015085522.1|328878_329562_+|pseudaminic-acid-cytidylyltransferase MRAIAIVLARSSSKRIKNKNIIDFFNKPMLAYPIEAALNSKLFEKVFISSDSMEYVYLAKNYGASFLNLRPKVLADDRATTLEVMAYHMKELELKDEDIACCLYGTSALLQEKHLKNAFEILKGNTDYVFTCSPFSASPYRSFSLENGVQMAFKEHLNTRTQDLKTLYHDAGLLYMGKAQAFKEMRPIFSQNSIALELSPLEVQDIDTLEDLELAKLKYSRLKNACQ >NC_019560.1|WP_080115090.1|329531_330425_+|CMP-N-acetylneuraminic-acid-synthetase MQPFEKRMPVKILCDCFLTSGLGHVRRCEKILSFIEKLGVKADLYLYKQNNISAFLEGVGNDDFLIIDSYCLNSKDFYLLKEKAKSLMVIEDEEHAKGFYPKNTKILNFTLNALKHYHHLSKDYQYYLGVGFYPIDARFVYERPINTENKEVLITLGGSEQKTLKEIVKILENKNVNLHIISPYTPKNSPKNTHYYSPLSPLEFSSLMKFCACAISATGQTLYELALSQTPSLILPIASNQIIQSQEFENSGIFKQTSLKTLARDFEKLQIQKNQAWAKNLAFGSELEGALREFLEI >NC_019560.1|WP_015085524.1|330421_330964_+|UDP-4-amino-4,-6-dideoxy-N-acetyl-beta-L-altrosamine-N-acetyltransferase MKKNYSYGNTQAIDFTRLNDEEKLLVLEFRNHPNTALWMYSAFISLKTHLQFIEDLKNSPNHRYFLFKEEGVYLGVGSITKINFFHKHGYLGIYKNPFLKNGGEAILKALECIAFEEFQLNSLHLEVMENNFKAIAFYEKNHYELEGRLKGFISKEKEFIDVLLYYKDKKGYNDQSSLKF >NC_019560.1|WP_015085525.1|330896_331835_-|tetraacyldisaccharide-4'-kinase MKSDKPFLERYFYDPTLLQKGLIFALYPFSLIYQGIATLKRKTAKKHDFKIPLISVGNLIAGGSGKTPFILEIAPRYQEVAVVSRGYQRDSKGLVVVSVKGNILVSQKTAGDEAYLLALNLKQASVIVSEKRELGVLKALELGAKIVFLDDGFRFNFNQFNVLLKPKVPPYYPFCLPSGLYRESIKSYKEAHLIITEDKDYQRITSIAHPTKRMLLVTAIANPSRLDAFLPKEVVKKLYFRDHALFDLEFLEKEFYQNNATSLLVTSKDLVKLQDCNLPLSVLDLKLEIDPKILEKIDHYILSYPCNTKERL >NC_019560.1|WP_015085526.1|331831_332614_-|NAD+-synthase MQKDYQKLIAYLCDFLEKEVQKRGFKKVVYGLSGGLDSAVVGVLCQKVFKENAHALLMPSSVSMLESKTDALDLCETFSIPYTEYSITPYDAIFDSHFKDASLTRKGNFCARLRMAFLYDYSLKSDSLVIGTSNKSERMLGYGTLFGDLACAINPIGELFKTEVYELACHLNIPKKILNKPPSADLFVGQSDEKDLGYPYSVIDPLLKDIEALFQNKPIDAETLTQLGYDEILVKNIISRIQKNAFKLELSTIAKRFNPK >NC_019560.1|WP_015085527.1|332861_333854_+|ketol-acid-reductoisomerase MALPVYYDKDIDLGVIQSLQVGIIGYGAQGEAQALNLRDSKVRVRIGLYQGSLSVLKAKAEGFEVLEVKELVQQSDVIMALLPDELHKEVLEKEVIPFLKEGQIVGFAHGFSVHFNQVVLPKGVGAILVAPKGPGSALREEYLKNRGLYHLIAIEQESLKNNAKAVALSYAKAMGGGRMGVLETSFKEECESDLFGEQAVLCGGLEAIVRMGFETLIKAGYPEELAYFECVHEVKLVADLLHYKGVEGLRKHISNTAEFGAIKNREPMGNLLEKRMQKILKKIQNGSFAKDFLLEKSLNYPRLNTERKALKETKIEQIGEILRAPFNHKK >NC_019560.1|WP_001019043.1|333872_334679_+|septum-site-determining-protein-MinD MAIVVTITSGKGGVGKSTTTANLAIGLAESGKKVVAVDFDIGLRNLDMILGLENRIVYDVVDVMEKNCNLSQALITDKKTKNLSFLAASQSKDKNILDKEKVAILINALRADFDYILIDSPAGIESGFEHAILHADMALVVVTPEVSSLRDSDRVIGIIDAKSNRAKKGMEVHKHLIINRLKPELVANGEMISIEEVLKILCLPLIGIIPEDSHIISATNKGEPVIRTDCESAKAYQRITRRILGEEVEYVEFKAKKGFFSALKGIFS |
You can click texts colored in the table to view more detailed information
Click the colored protein region to show detailed information
| CRISPR_ID | CRISPR_location | CRISPR_type | Repeat_type | Spacer_info | Cas_protein_info | CRISPR-Cas_info | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NC_019560_4 | 325725-325930 | Orphan |
NA
Consensus repeat of NC_019560_4
|
4 spacers
spacers of NC_019560_4
>4.1|325748|16|NC_019560|CRISPRCasFinder CTCTTGGCTGTTAGAG >4.2|325787|34|NC_019560|CRISPRCasFinder TTCTTGCATGGCCTCTAATTCTTGCACGCTTGGG >4.3|325844|22|NC_019560|CRISPRCasFinder TTCCTCTTTAACTTCTTGCATT >4.4|325889|19|NC_019560|CRISPRCasFinder TTCTTCTTTGATTGGCTCT |
CRISPR arrays and Neighbor proteins around NC_019560_4
The CRISPR arrays of NC_019560_4 >merge|NC_019560|4|325725-325930|CRISPRCasFinder CTTTCTTGGGTTTCTTTTTTATCCTCTTGGCTGTTAGAGTTTTCTTGGATTTCTTTGACTAATTCTTGCATGGCCTCTAATTCTTGCACGCTTGGGGAATCTTGCGTTTTTTCTTGTTTTTCCTCTTTAACTTCTTGCATTTCTTCTTTAACTTCTTCTTGCGTTTCTTCTTTGATTGGCTCTTGTTCTTTGGCTTGCTCTTGCGT >NC_019560|4|3|325725-325930|CRISPRCasFinder CTTTCTTGGGTTTCTTTTTTATC CTCTTGGCTGTTAGAG TTTTCTTGGATTTCTTTGACTAA TTCTTGCATGGCCTCTAATTCTTGCACGCTTGGG GAATCTTGCGTTTTTTCTTGTTT TTCCTCTTTAACTTCTTGCATT TCTTCTTTAACTTCTTCTTGCGT TTCTTCTTTGATTGGCTCT TGTTCTTTGGCTTGCTCTTGCGT
>NC_019560.1|WP_000551229.1|324645_325266_-|guanylate-kinase MHNDFNLLILSGPSGAGKSTLTKYLQEKIPKTHFSLSTTTRKPREGEVDGLHYNFVSEEEFKQGIEKGQFLEWAIVHNHYYGTSKIPVEKALKEGKIVIFDIDVQGHEILKKHYPNACSVFISTKNQEILKERLLLRGTDSKETIEKRLINAYKEMQCLESFDYLIINEDLEKSKEIILSIAKTLVHRLKAFNFEKICKAWKNESL >NC_019560.1|WP_000508577.1|324335_324575_-|twin-arginine-translocase-TatA/TatE-family-subunit MGGFTSIWHWVIVLLVIVLLFGAKKIPELAKGLGSGIKNFKKAVKDDEEEAKNEPKTLDAQAAQTKVHETSEIKSKQES >NC_019560.1|WP_015085518.1|322707_324333_-|arginine--tRNA-ligase MHTLIKGVLEEILEEEIIIEYPKDREHGHYATPIAFNLAKVFKKSPLVIAEELALKISTHEKTQGLFDSVVACKGYINFTLSLYFLERFTQKALELKEQFGSQPKSEYSQKIFLEFVSANPTGPLHIGHARGAVFGDSLAKIARFLGHEVLCEYYVNDMGSQIRLLGLSVWLAYREHVLKESVTYPEVFYKGEYIIEIAKKANNDLEPSLFKENEETIIEVLSGYAKDLMLLEIKDNLDDLGIHFDSYASEREIFKHKDAVFERLEKANALYEKDSKIWLKSSLYHDESDRVLIKEDKSCTYLAGDIVYHDEKFKQNYTKYINIWGADHHGYIARVKASLEFLGYDSNKLEVLLAQMVRLLKDNEPYKMSKRAGNFILIKDVIDDVGKDALRFIFLSKRLDTHLEFDVNTLKKQDSSNPIYYIHYANSRIHTMLEKSPFSKEEILQTPLTDLNAEEKYLLFSALSLPKIIESSFEEYGLQKMCEYAKTLASEFHRFYNAGKILNTPKAKELLKICLMVSLSLSNAFKLLGIEIKTKISAKD >NC_019560.1|WP_015085517.1|321889_322645_-|HugZ-family-heme-oxygenase MLNRIIEHMNANHVEDMKGLLKKFGQVHHAENVAFKSVDPQGVVIGYNNNQTLRIEFNHEVKDPKDYKNAIIELCQSVEKTHDLKGVEEEVKAFKEGFDSVCLATLHPNGHVVCSYAPLMTDGKQYYIYVSEVAEHFAGLKHNPHNVEVMFLEDESKAKSAILRKRLRYKTNARFIERGAEFDKAFDSFIEKTGGAGGIKTIRAMQDFHLIALDFKEGRFVKGFGQAYDILGDKIAYVGGKGNAHDFAHKK >NC_019560.1|WP_015085516.1|320275_321421_-|YbfB/YjiJ-family-MFS-transporter MRVFVCFLGVFVSNGLARFGYVVLIPLLILSGSLTPHQSFQLGIAVLMGYVFGSFLIQFLSPLMSLESIAKISFGLIALSFLICYFDSIPFFWLWIWRFIAGVASSALMILVAPLSLPYVKENKRALVGGFIFSAVGIGSVFSGFVLPWISSYNIKWAWIFLGGSCLIAFILSLIGLKNHSLRKKSIKKEESAFKIPFHLWLLLISCALNAIGFLPHTLFWVDYLIRHLNISPAIAGTSWALFGFGATLGSLISGPMAQKLGAKNANIFILVLKSIACFLPIFFHQISLLNLSIFIMGAATTANINLFSMMALKIAGAKHFAKASSWVVFSFGIFQALFSYLFTIFLGDLGYLLIFVICGACLVLSFIVLFPIKMQTAINQ >NC_019560.1|WP_015085515.1|319307_320270_+|GTP-binding-protein MPKIPITLITGFLGSGKTSFLSEYLNQTDHQGVALIINEIGQAALDQRILSVQYCGEKMLYLNAGCVCCNKRMDLVESLKATLNNYEWRGEILKRIIIETTGLANPAPILWTILSDTFLGAHFEIQSVVVCVDALNARMHLTNNEAKEQIVFADSILLTKTDLQNDSVALIKLKERLQSINPSAEIFDKKNIHYESFFSRKNRVHRVILPAKDSHSQGFETLSINFEGAMEWSAFGIWLSLLLHKYGTQILRIKGIIDIGSGFLVSINGVMHIIYPPKHILKDQNGSNLVFIMRHLECEKILNSLKGFKDFLGIKGFETQ >NC_019560.1|WP_015085514.1|318939_319308_+|hypothetical-protein MCVLCGELISSFHWTDGTDSYENDENLKGQNALISANENARERKRARLKRVRLLNQILAFYGLKMDDWQGAKFVLCDKKGQSVIVNDLGDLWDKAQNLAKKEMDALDSHLLAFLNQNKNAIH >NC_019560.1|WP_015085513.1|318011_318893_+|polysaccharide-deacetylase MAKEILVAYGVDIDAVAGWLGSYGGEDSPDDISRGLFAGEVGIPRLLKLFKKYHLPATWFAPGHSIETFPEQMKMIVDAGHEVGAHGYSHENPIAMSAKQEEDVLLKSIELIKELTGKAPTGYVAPWWEFSNITNELLLKHGFKYDHSLMHNDFTPYFVRVGDSWSKIDYSLEAKDWMKPLIRGVETDLVEIPANWYLDDLPPMMFIKKSPNSFGFVSPRDIGQMWIDQFDWVYREMDYAVFGMTIHPDVSARPQVLLMHEKIIEHINEHEGVRWVTFNEIADDFLKRSPRKK >NC_019560.1|WP_015085512.1|317114_317999_+|carbon-nitrogen-hydrolase-family-protein MKTKNPAKRILKTAVIQMQSKPYALNENLQLALNLAKEAHNKGTNLIVLPELFDSGYCVNDKDADFGIDLKAIEHGKETLKNESLRALNNFAKSNKVHLVACSIEKTNNKLYDSAYIIPPKGGIVGKHRKIYLWGDEKSRFKRGKKYEIFTLDFGDFSAKVGLQICYEIGFGVGANLLALQGAEVLIYPSAFGKARAYNWDLLSKARALENGCFVCACNHSGEETNTQLKQTLEFAGDSRIIAPNGKIIAQATKLNEVIIAEMDLNEVALQRQKIPYLQDFDTKLTKKGFGKLT >NC_019560.1|WP_000336426.1|316626_317031_+|hypothetical-protein MCQIKCLLILLSINIVSAIIIYFFQAFQGVLNFEGGFLGFFIVALSSYYGVKKRLDLRKQNSGEKEEKQKFQKFALGLEMSFNVWRLGGYGVLLGILGALLFLHLFNGLIFLIGVFVSSLSSVLLRFLNNNGKF >NC_019560.1|WP_000932525.1|326731_327274_+|nuclease MLNKFKKIVGVSVLVGCLGVLQAKNSLFVLPYEQKDALNSLVSGISNARESVKIAIYSFTHRDIARAIKSVASRGIKVQIIYDYESNHNNKQSTIGYLDKYPNTKVCLLKGLKAKNGNYYGIMHQKVAIIDDKIVFLGSANWSKNAFENNYEVLLKTDDTETILKAKSYYQKMLGSCVGF >NC_019560.1|WP_015085520.1|327280_328018_-|outer-membrane-protein MRTLLKMLVGISLLTHALIAKEESAASPWTKNLYMGVNYQTGSINLMTNIHEVREITNYQTGYTNIITSVNSVKKLTNMGSNGIGLVMGYNHFFHPDKMLGLRYFAFLDWQGYGMRYPKGYYGGNNMITYGVGVDAVWNFFQGSFYQDDIGVDIGVFGGIAIAGNSWYIGNKGQELLGITNNRAVDNTSFQFLFNFGLKALFVDEHEFEIGFKFPTINNKYYTTDALKVQMRRVFAFYVGYNYHF >NC_019560.1|WP_015085521.1|328147_328861_+|flagellar-basal-body-L-ring-protein-FlgH MKKALYLGAVAFSVVFSMVSANEPKIDFNPPNYVEETPSKEFIPELNKLGSLFGQGERPLFADRRAMKPNDLITIIVSEKASANYSSSKDYKSASGGNSTPPRLTYNGLDERKKQEAQYLDDKNNYNFTKSSNNTNFKGGGSQKKSEDLEIVLSARIIKVLENGNYFIYGNKEVLVDGEKQILKVSGVIRPYDIERNNTIQSKFLADAKIEYTNLGHLSDSNKKKFAADAMETQMPY >NC_019560.1|WP_015085522.1|328878_329562_+|pseudaminic-acid-cytidylyltransferase MRAIAIVLARSSSKRIKNKNIIDFFNKPMLAYPIEAALNSKLFEKVFISSDSMEYVYLAKNYGASFLNLRPKVLADDRATTLEVMAYHMKELELKDEDIACCLYGTSALLQEKHLKNAFEILKGNTDYVFTCSPFSASPYRSFSLENGVQMAFKEHLNTRTQDLKTLYHDAGLLYMGKAQAFKEMRPIFSQNSIALELSPLEVQDIDTLEDLELAKLKYSRLKNACQ >NC_019560.1|WP_080115090.1|329531_330425_+|CMP-N-acetylneuraminic-acid-synthetase MQPFEKRMPVKILCDCFLTSGLGHVRRCEKILSFIEKLGVKADLYLYKQNNISAFLEGVGNDDFLIIDSYCLNSKDFYLLKEKAKSLMVIEDEEHAKGFYPKNTKILNFTLNALKHYHHLSKDYQYYLGVGFYPIDARFVYERPINTENKEVLITLGGSEQKTLKEIVKILENKNVNLHIISPYTPKNSPKNTHYYSPLSPLEFSSLMKFCACAISATGQTLYELALSQTPSLILPIASNQIIQSQEFENSGIFKQTSLKTLARDFEKLQIQKNQAWAKNLAFGSELEGALREFLEI >NC_019560.1|WP_015085524.1|330421_330964_+|UDP-4-amino-4,-6-dideoxy-N-acetyl-beta-L-altrosamine-N-acetyltransferase MKKNYSYGNTQAIDFTRLNDEEKLLVLEFRNHPNTALWMYSAFISLKTHLQFIEDLKNSPNHRYFLFKEEGVYLGVGSITKINFFHKHGYLGIYKNPFLKNGGEAILKALECIAFEEFQLNSLHLEVMENNFKAIAFYEKNHYELEGRLKGFISKEKEFIDVLLYYKDKKGYNDQSSLKF >NC_019560.1|WP_015085525.1|330896_331835_-|tetraacyldisaccharide-4'-kinase MKSDKPFLERYFYDPTLLQKGLIFALYPFSLIYQGIATLKRKTAKKHDFKIPLISVGNLIAGGSGKTPFILEIAPRYQEVAVVSRGYQRDSKGLVVVSVKGNILVSQKTAGDEAYLLALNLKQASVIVSEKRELGVLKALELGAKIVFLDDGFRFNFNQFNVLLKPKVPPYYPFCLPSGLYRESIKSYKEAHLIITEDKDYQRITSIAHPTKRMLLVTAIANPSRLDAFLPKEVVKKLYFRDHALFDLEFLEKEFYQNNATSLLVTSKDLVKLQDCNLPLSVLDLKLEIDPKILEKIDHYILSYPCNTKERL >NC_019560.1|WP_015085526.1|331831_332614_-|NAD+-synthase MQKDYQKLIAYLCDFLEKEVQKRGFKKVVYGLSGGLDSAVVGVLCQKVFKENAHALLMPSSVSMLESKTDALDLCETFSIPYTEYSITPYDAIFDSHFKDASLTRKGNFCARLRMAFLYDYSLKSDSLVIGTSNKSERMLGYGTLFGDLACAINPIGELFKTEVYELACHLNIPKKILNKPPSADLFVGQSDEKDLGYPYSVIDPLLKDIEALFQNKPIDAETLTQLGYDEILVKNIISRIQKNAFKLELSTIAKRFNPK >NC_019560.1|WP_015085527.1|332861_333854_+|ketol-acid-reductoisomerase MALPVYYDKDIDLGVIQSLQVGIIGYGAQGEAQALNLRDSKVRVRIGLYQGSLSVLKAKAEGFEVLEVKELVQQSDVIMALLPDELHKEVLEKEVIPFLKEGQIVGFAHGFSVHFNQVVLPKGVGAILVAPKGPGSALREEYLKNRGLYHLIAIEQESLKNNAKAVALSYAKAMGGGRMGVLETSFKEECESDLFGEQAVLCGGLEAIVRMGFETLIKAGYPEELAYFECVHEVKLVADLLHYKGVEGLRKHISNTAEFGAIKNREPMGNLLEKRMQKILKKIQNGSFAKDFLLEKSLNYPRLNTERKALKETKIEQIGEILRAPFNHKK >NC_019560.1|WP_001019043.1|333872_334679_+|septum-site-determining-protein-MinD MAIVVTITSGKGGVGKSTTTANLAIGLAESGKKVVAVDFDIGLRNLDMILGLENRIVYDVVDVMEKNCNLSQALITDKKTKNLSFLAASQSKDKNILDKEKVAILINALRADFDYILIDSPAGIESGFEHAILHADMALVVVTPEVSSLRDSDRVIGIIDAKSNRAKKGMEVHKHLIINRLKPELVANGEMISIEEVLKILCLPLIGIIPEDSHIISATNKGEPVIRTDCESAKAYQRITRRILGEEVEYVEFKAKKGFFSALKGIFS |
You can click texts colored in the table to view more detailed information
Click the colored protein region to show detailed information
| CRISPR_ID | CRISPR_location | CRISPR_type | Repeat_type | Spacer_info | Cas_protein_info | CRISPR-Cas_info | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NC_019560_5 | 710263-710357 | Orphan |
NA
Consensus repeat of NC_019560_5
|
1 spacers
spacers of NC_019560_5
>5.1|710289|43|NC_019560|CRISPRCasFinder TATTGGGCATACGGATTGTTTGAATTATTTGAATTATTTGAAT |
CRISPR arrays and Neighbor proteins around NC_019560_5
The CRISPR arrays of NC_019560_5 >merge|NC_019560|5|710263-710357|CRISPRCasFinder TGCTTGGAGACAGACTACTTGGATAGTATTGGGCATACGGATTGTTTGAATTATTTGAATTATTTGAATTGCTTGGAGACGGACTACTTGGATAG >NC_019560|5|4|710263-710357|CRISPRCasFinder TGCTTGGAGACAGACTACTTGGATAG TATTGGGCATACGGATTGTTTGAATTATTTGAATTATTTGAAT TGCTTGGAGACGGACTACTTGGATAG
>NC_019560.1|WP_000270596.1|708377_709598_+|HD-family-hydrolase MYAAHPIKPLKAPKLKTKFLRRVFVGASIRRWNDQACPLEFVELDKQAHKAMIAYLLAKDLKDRGKDLDLDLLIKYFCFEFLERLVLTDIKPPIFYALQQTHSQELASYVAQSLQDEISAYFSLEELKEYLSHRPQILETQILESAHFYASKWEFDIIYHFNPNMYGVKEIKDKIDKQLHNNEHLFEGLFGEKEDLKKLVSMFGQLRFQKRWSQTPRVPQTSVLGHTLCVAIMGYLLSFDLKACKSMRINHFLGGLFHDLPEILTRDIITPIKQSVAGLDNCIKEIEKKEMQNKVYSFVSLGVQEDLKYFTENEFKNRYKDKSHKIIFTKDAEELFTLYNSDEYLGVCGELLKVCDHLSAFLEAQISLSHGISSNDLIKGAQNLLELRSQTELLDLDLGKLFRDFK >NC_019560.1|WP_000750993.1|707080_707983_+|S-adenosyl-l-methionine-hydroxide-adenosyltransferase-family-protein MKKTILALFLSACIGLSSVCASNALILQTDFSLKDGAVSAMKGVAFSVDSNLKIFDLTHEIPPYNIWEGAYRLYQSASYWPQGSVFVSVVDPGVGTKRKSVVLKTKNGQYFVSPDNGTLTLVAQTLGIDSVREIDEKANRLKGSEKSYTFHGRDVYAYTGARLASGAITFEQVGPELPAKVVEIPYQKAKATKGEVKGNIPILDIQYGNVWSNISDRLLNQAGIKRNDILCVTISKGSKKKYEGKMPYVASFGDVLEGQPLVYLNSLLNVSVALNMDNFAQKYQIKSGADWNIDIKKCAK >NC_019560.1|WP_000023770.1|706497_706842_+|hypothetical-protein MSIKSHSSNEKERFVRIEEDEKKELFAGTANENSHGLSLMALIGVLVFGGAFLALLAPKIYLSNNIYYISRKINTLEDQKRLLLEEQQILKNELEKERFKYYIENSENIGDIAF >NC_019560.1|WP_015085802.1|705551_706478_+|16S-rRNA-(cytosine(1402)-N(4))-methyltransferase-RsmH MQEIESLHQSVLLQEVLQAFAPLEEGVLIDCTLGLGGHSKAILSQKPHLKLIGIDKDKFAQEIAKERLKAFEGRYNLLSGGFAKRFKEALETHDKEIKGVLVDLGVSSLQLDDDSRGFNFHSHALDMRMDLESDLNAQKVINSYPIVALEKIFKNYGEIKEYKKIAHKIAERRAKKPFKDAKDLSDFLSSLSKNKKIHPATLVFQAVRIEVNSELEELKEFLQCAKNLKGAILCVISFHSLEDALVKNAFKDYAKNCVCDPLSFKCTCSNNHALGEILTKKPITPSPEEIKNNRRSRSAKMRVFQFKP >NC_019560.1|WP_015085801.1|704538_705360_+|Hop-family-outer-membrane-protein-HopE MEFMKKFVALGLLSAVLSSSLLAEGDGVYIGTNYQLGQARLNSNIYNTGDCTGSVVGCPPGLTANKYNPGGTNINWHSKYANGALNGFGLNVGYKKFFQFKSFDMTSRWFGFRVYGLFDYGHADLGKQVYAPNKIQLDMVSWGVGSDLLADIIDKDNASFGIFGGVAIGGNTWKSSAANYWKEQIIEAKGPDVCTPTYCNPNAPYSTNTSTVAFQVWLNFGVRANIYKHNGVEFGVRVPLLINKFLSAGPNATNLYYHLKRDYSLYLGYNYTF >NC_019560.1|WP_041200081.1|701538_704346_-|excinuclease-ABC-subunit-UvrA MDKIIIQGARENNLKNIFLEIPKNQFVVFTGLSGSGKSTLAFDTLYAEGQRRYLESLSSYARQFLDKVGKPNVDKIEGLTPAIAIDQKTTSKNPRSTVGTITEIYDYLRLLFARIGEQFCPTCLEPISSMSASDIISQICHLEEDSKIIILAPIIKDKKGSFNDKLESLRLKGYVRAFVDGVMVRLDEEIHLHKTKKHTIEAVVDRVVINSENSSRIASAVEKALKESYGELEVEILQDDAPSIRKHYSEHKACFKCKMSFEELEPLSFSFNSPKGACESCLGLGTKFSLDISKILDPNTPLNQGAIKVIFGYNRNYYAQMFEGFCEYNGIDSALCFNELNKEQQDALLYGNGTEISFHFKNSSLKRPWKGIIQIAYDMFKEQKDLSDYMSEKTCSSCEGHRLKASSLSVQVAGLKMADFLTKPIEEVYHFFNDPTHFSYLNEQEKKIAEPILKEILERVFFLYDVGLGYLTLGRDARTISGGESQRIRIASQIGSGLTGVLYVLDEPSIGLHEKDTLKLINTLRNLQKKGNTLIVVEHDKETIKHADFVVDIGPKAGRHGGEVVFSGSVKDLLQNNHSTALYLNGTKKIERPKLELPKEKHFLEIKNVNINNIKNLSVQIPLKQLVCITGVSGSGKSSLILQTLLPTAQTLLNHAKKIQSLNGVEIVGLEHLDKVIYLDQAPIGKTPRSNPATYTGVMDEIRILFSEQKEAKILGYSASRFSFNVKGGRCEKCQGDGDIKIEMHFLPDVLVQCDSCKGAKYNPQTLEIKVKGKSIADVLNMSVEEAYEFFAKFPKIAVKLKTLIDVGLGYITLGQNATTLSGGEAQRIKLAKELSKKDTGKTLYILDEPTTGLHFEDVNHLLQVLHSLVALGNSMIVIEHNLDIIKNADYIIDMGPDGGDKGGKVIASGTPLEVAQNCEKTQSYTGKFLALELK >NC_019560.1|WP_015085799.1|700611_701448_+|hypothetical-protein MLANDFMVKELKNKELHGLLCNKLSKRVDRFGYRAIGVGVDKETNEVIVQLDKETIVRLNNRTALANDDNFMENIFDEFNKLKANKEPQKPKKPNSIYYGHGSSYKIIDVLNDKDGDFINCKLFIVKELGVDECLGFYVPPMINNNNTTLADLLENGEPAIYYEANSANIRRFLDRGPYNIEWLMRKYLEVGFRSCKVERIRETEFAIKFRYKKWGSMIDREVKMQFPKYLKDSKKEAVRITSRVFDELLKGPLFGNLLGKDPIQFASLSILQRLSCH >NC_019560.1|WP_001877566.1|699359_700505_+|sigma-54-dependent-Fis-family-transcriptional-regulator MKIAIVEDDINMRKSLELFFELQDDLEIVSFKNPKDALAKLDESFDLVITDINMPHMDGLEFLRLLEGKYESIVITGNATLNKAIDSIRLGVKDFFQKPFKPELLLESIYRTKKVLEFQKKHPLEKPLKKPHKHSFLAASKALEESKRQALKVASTDANVMLLGESGVGKEVFAHFIHQHSQRSKHPFIAINMSAIPEHLLESELFGYQKGAFTDATAPKMGLFESAHKGTIFLDEIAEMPIQLQSKLLRVVQEKEITRLGDNKSVKIDVRFISATNANMKEKIAAKEFREDLFFRLQIVPITIAPLRERVEEILPIAEIKLKEVCDAYHLGPKSFSKNAAKRLLEYSWHGNVRELLGVVERAAILSEGAEIQEKDLFLER >NC_019560.1|WP_015085798.1|698889_699363_+|hypothetical-protein MRFFLFLYFLLYFLGVSLHALNPLEDQEFLISYRLKIVDSRVMGEEYSVSKPIVSRIKTAPYVLDYHCSIITRNSPDLKDSLLPIKLERFLLEIALKKEKERVIDCILKSQVAITHYDHSYKNGTTTTSILNLKALSVRASLVGDALFLDIFRKEEE >NC_019560.1|WP_015085797.1|696403_698890_+|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-A MQDNLVNETKNIVEVGIDSSIEESYLAYSMSVIIGRALPDARDGLKPVHRRILYAMHELGLTSKVAYKKSARIVGDVIGKYHPHGDNAVYDALVRMAQDFSMRLELVDGQGNFGSIDGDNAAAMRYTEARMTKASEEILRDIDKDTIDFVPNYDDTLKEPDILPSRLPNLLVNGANGIAVGMATSIPPHRIDEIIDALVHVLENPNAGLDEILEFVKGPDFPTGGIIYGKAGIIEAYKTGRGRVKVRAKVHVEKTKNKEIIVLDEMPFQTNKAKLVEQISDLAREKQIEGISEVRDESDREGIRVVIELKRDAMSEIVLNHLYKLTTMETTFSIILLAIYNKEPKIFTLLELLRLFLKHRKTIIIRRTIFELEKAKARAHILEGYLIALDNIDEIVRLIKTSQSPEAAKNALMERFTLSEIQSKAILEMRLQRLTGLEREKIKEEYQNLLELIDDLNGILKSEDRLNEVVKTELLEAKEQFSSPRRTEIQEAYENIDIEDLIANEPMVVSMSYKGYVKRVDLKAYERQNRGGKGKLSGNTYEDDFIENFFVANTHDILLFITNKGQLYHLKVYKIPEASRIAMGKAIVNLISLDPDEKIMATLSTKDFSDERSLAFFTKNGVVKRTNLSEFGSNRSYSGIRAIVLEEGDELVGAKIVDKDAKHLLIASYLGLFIKFPLEDVREIGRSTRGVIGIKLNENDFVVGAVVINDDSNKLLSVSENGLGKQTLAEAYREQSRGGKGMIGMKLTQKTGNLVSVISVDDENLDLMILTASAKMIRVSIKDIKETIGRNTSGVKLIDTADKVVYANSCPKEEEPENSENPPTQLFE >NC_019560.1|WP_015085804.1|710690_711935_-|RNA-polymerase-factor-sigma-54 MAVLRANLSPKNKLNATLKGWLPILQSELEDLEEVLKQNALDNPLIKIENKRIKNFSDRFSAKSSSDHLENFAIASKSLFETLEAQIIPPLFPTETSQKIAMDIINGLDSEGYFEENIEERAKILGVESEVYEKVRQRFSYLNPAGIGAKDVKESFLFQLEGRELDNNELYEEARKIILNLEKHHEFSKDFYYEKALKILKSFKNPPAIEFLEKEIEVIPELFILEVDDEIIVRLNDESYPTISLEENRFKDNAYLKEKLKEAKDLIDALNLRKATIYKIGLMLLEYQYDFFKGKKLRPLKLLDLANEFNHSVSTISRAISNKYLACQRGVFPIKHFFSTALDNSETSNAVIKDYLLELIKNEDKKEPLSDAKILELIEEKFHLKMVRRTITKYRQLLNIASSSERKKLYLMRA >NC_019560.1|WP_015085805.1|711937_712660_-|LPS-export-ABC-transporter-ATP-binding-protein MDILKAEHLNKQIKKTKIVSDVSLEVKSGEVVGLLGPNGAGKTTTFYMICGLLEPSGGSVYLNDVDLAKYPLHKRSNLGIGYLPQESSIFKELSVEDNLVLAGESTFKNSKESEEKMESLLDAFNIQAIRERKGMSLSGGERRRVEIARALMKNPKFVLLDEPFAGVDPIAVIDIQKIIESLIKLNIGVLITDHNVRETLSVCHRAYVIKSGTLLASGNANEIYENALVRKYYLGENFKV >NC_019560.1|WP_001201267.1|712672_713074_-|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-ATPase-subunit-type-1-TsaE MRAHLDELDKVAAAILKDDFKGVVLLKGVVGSGKTTLVQACLKHLGLDIQATSPTFSLMHAYSESVFHYDFYMRDLEACLELGMLECLLEKGIHFVEWGDEKLEKILKKYDLAIKVVEIKTELTSRFYTIKIV >NC_019560.1|WP_015085806.1|713070_714828_-|DNA-polymerase-III-subunit-gamma/tau MQVLALKYRPKHFSELVGQESVAKTLSLALDNQRLANAYLFSGLRGSGKTSSSRIFARALMCEKGPKAVPCDTCTQCQSALNNHHIDIIEMDGASNRGIDDVRNLIEQTRYKPSFGRYKIFIIDEVHMFTTEAFNALLKTLEEPPSHVKFLLATTDALKLPATILSRTQHFRFKKIPENSVISHLKTILEKEQVSYETSALDKLAHSGQGSLRDTITLLEQAINYCDNAITESKVAEMLGAIDRSVLEDFFQSLINQDEARLQERYAILENYETESVLEEMMLFLKAKLLSPDSYSILLIERFFKIIMSGLSLLKEGANASFVLLLLKMKFKEALKLKALDDAILELEQSKESVLKPLNQNANAFKQEPKNAEKKEGAEKRESTEKKENTETPQTPMLSAKDRIFHNLFKQVQTLVYERNYELGAVFEKNIRFIDFDSQTKTLTWESSATHKDKELLRERFKIVKSIVDGVFGKGENIKIALKNQNKSALEVVKEFKFPYSKPKPTTETTAETKENDTKEAVEKETKEIKENDTKEAVEKKAKEKEVQETQPKETPTALQEFMANHSDLIEEIKSEFEIKSVELL >NC_019560.1|WP_015085807.1|714896_715529_-|amino-acid-transporter MFVIFAKGYSLAISLCAAVGAQSLFIVERGMARNYVFLICALCFMCDIVLMSMGVFGVGAYFAKNLYLSLFLNLFGAAFTGFYAFLAFRTLFQTFKKKHVQTPKKLSLKKTLLFTLGVTLLNPQVYLEMVFLIGASALSFNLAQKFVFLAGTLSAAFSWLLLLCALSLRYGSKLLNNQKIFMGVNLFVTAIMGTLSVTLFRDFLALLSKT >NC_019560.1|WP_015085808.1|715786_716209_+|DUF1104-domain-containing-protein MRKSLAFCLMVALGLQILGARDFSSLKNEELLKLAGTLPSNEAIDYRMEVSKRLKALNAEDAKKFRANFSRIARKNLSKMSEEDFKKMREEVRKELEEKTKGLSAEEIKAKGLNVSVCSGDTRKVWCRAVKKKDEHCSPK >NC_019560.1|WP_015085809.1|716237_716708_+|DUF1104-domain-containing-protein MKKALKILSISALLFVALNAKDFSKTSDEDLAKMAGVVAPQDIVDYTKELKKRMEKMPEDKRKAFHKQLHEYATKNTDNMTVADFEAHKKAVKEALKKSNMKDMDDDLGLRSCKHGKMHKHHKHDGQNKAKGHDKGHGEEQGKKDHDHDDHGENEK >NC_019560.1|WP_015085810.1|716896_717274_+|hypothetical-protein MAYTYNQNSEMSILARVFNTAVFSNDSAFDIYVPTTIKVPILKTSPAYKIWLNARMQNPILGECVLKDDESYPCVIKQVTLNFNVIDLVTSVEFTIKGNFYVNQDLIKFQSKNKNLKPLQRFKPF >NC_019560.1|WP_015085811.1|717283_718276_-|type-II-asparaginase MAQNLPTIALLATGGTIAGSGASANLGSYKSGELGIKELLKAIPSLNKLARIQGEQISNIGSQDMNEEVWFKLAKRAQELLDDSRIQGVVITHGTDTLEESAYFLNLVLHSTKPVALVGAMRNASSLSADGALNLYNALSVAANEKSANKGVLVVMDDNIFSAREVAKTHTTHTSTFKALNSGAIGSVYYGKTRYYMQPLRKHTTESEFSLSQLKTPLPKVDIIYTHAGMTLDLFQASLNSHAKGVVIAGVGNGNVSVGFLKAMQEASNMGVVIVRSSRVGSGGVNSGEIDDKAFITSDNLNPQKARVLLQLALTKTNDKAKIQEMFEEY >NC_019560.1|WP_041200014.1|718358_719687_+|anaerobic-C4-dicarboxylate-transporter MDAFFQIVVLLFSLFLGARLGGLGVGYAGGLGVLVLCLFLGLNPGKIPFDVILIIMAVISAISAMQKAGGLDYLVKIAEKILRKHPKQINYLAPSVAYFLTILAGTGHTVFSLIPVIVEVSQSQNIKPKAPLSLAVVSSQVAITASPVSAAVVFMSGILEPLGANYLTLLMVWIPTTFLACMITAFVMGFTDLKLDSDPNYLERLKARKIPLPIIKEEKEISKSAKLSLWIFIGGVVAIVFYASAISKNIALISPVVLGRDDAIVSFMLSVAALIALFCKINANEIAHSSVFKSGMQACVCVLGVAWLGDTFVSNHLDEIKRYASFLIADYPFLLAVALFLASMLLYSQAATSKALIPSVITALGISANHTEHLYIIVASFASVSALFVLPTYPTLLGAIAMDNTGTTKMGRYVFDHAFLIPGVLVVFLSVALGFVVAPLVL |
You can click texts colored in the table to view more detailed information
Click the colored protein region to show detailed information
| CRISPR_ID | Spacer_Info | Spacer_region | Spacer_length | Hit_ID | Protospacer_location | Mismatch | Identity |
|---|---|---|---|---|---|---|---|
| NC_019560_4 | 4.3|325844|22|NC_019560|CRISPRCasFinder | 325844-325865 | 22 | NC_019560.1 | 1429402-1429423 | 2 | 0.909 |
| NC_019560_4 | 4.4|325889|19|NC_019560|CRISPRCasFinder | 325889-325907 | 19 | NC_019560.1 | 697720-697738 | 2 | 0.895 |
| NC_019560_4 | 4.4|325889|19|NC_019560|CRISPRCasFinder | 325889-325907 | 19 | NC_019560.1 | 1322366-1322384 | 2 | 0.895 |
1. spacer 4.3|325844|22|NC_019560|CRISPRCasFinder matches to position: 1429402-1429423, mismatch: 2, identity: 0.909
ttcctctttaacttcttgcatt CRISPR spacer ttcttctttaacttcttggatt Protospacer ***.************** ***
2. spacer 4.4|325889|19|NC_019560|CRISPRCasFinder matches to position: 697720-697738, mismatch: 2, identity: 0.895
ttcttctttgattggctct CRISPR spacer ttcttctttgattttctct Protospacer ************* ****
3. spacer 4.4|325889|19|NC_019560|CRISPRCasFinder matches to position: 1322366-1322384, mismatch: 2, identity: 0.895
ttcttctttgattggctct CRISPR spacer ttcttctttctttggctct Protospacer ********* ********
| CRISPR_ID | Spacer_Info | Spacer_region | Spacer_length | Hit_phage_ID | Hit_phage_def | Protospacer_location | Mismatch | Identity |
|---|
| Region | Region Position | Protein_number | Hit_taxonomy | Key_proteins | Att_site | Prophage annotation |
|---|
| Acr ID | Acr position | Acr size | Homology with known anti | Neighbor HTH/AcRanker | Neighbor Aca | In prophage | Protospacer in prophage |
|---|