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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NC_019683 Leptolyngbya sp. PCC 7376, complete sequence 7 crisprs csa3,DinG,PD-DExK,cas3,cas6,DEDDh,RT 0 1 12 0

Results visualization

1. NC_019683
NC_019683 04000008000001200000160000020000002400000280000032000003600000400000044000004800000 CRISPR 1 2 3 4 5 6 7 Self-targeting Prophage 1 2 3 4 5 6 7 8 9 10 11 12 anti-CRISPR
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_019683_1 1349326-1349422 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_019683_2 2612972-2613089 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_019683_3 2613200-2613547 Orphan NA
4 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_019683_4 2967108-2967209 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_019683_5 3648990-3649162 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_019683_6 3807005-3807087 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_019683_7 4416052-4416143 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NC_019683_5 5.1|3649031|31|NC_019683|PILER-CR 3649031-3649061 31 NZ_CP010587 Bacillus megaterium Q3 plasmid p1, complete sequence 8373-8403 8 0.742
NC_019683_5 5.1|3649031|31|NC_019683|PILER-CR 3649031-3649061 31 NZ_CP023319 Bacillus megaterium strain A plasmid p2, complete sequence 6858-6888 8 0.742
NC_019683_5 5.1|3649031|31|NC_019683|PILER-CR 3649031-3649061 31 NZ_CP024037 Bacillus aryabhattai strain K13 plasmid unnamed2 2914-2944 8 0.742
NC_019683_5 5.1|3649031|31|NC_019683|PILER-CR 3649031-3649061 31 NZ_CP026740 Bacillus megaterium strain YC4-R4 plasmid unnamed4 63258-63288 8 0.742

1. spacer 5.1|3649031|31|NC_019683|PILER-CR matches to NZ_CP010587 (Bacillus megaterium Q3 plasmid p1, complete sequence) position: , mismatch: 8, identity: 0.742

aatacctcccttacatcaataacaattcccg	CRISPR spacer
ttcatgtcacttacatcaataacaattccgc	Protospacer
  .*. ** ********************  

2. spacer 5.1|3649031|31|NC_019683|PILER-CR matches to NZ_CP023319 (Bacillus megaterium strain A plasmid p2, complete sequence) position: , mismatch: 8, identity: 0.742

aatacctcccttacatcaataacaattcccg	CRISPR spacer
ttcatgtcacttacatcaataacaattccgc	Protospacer
  .*. ** ********************  

3. spacer 5.1|3649031|31|NC_019683|PILER-CR matches to NZ_CP024037 (Bacillus aryabhattai strain K13 plasmid unnamed2) position: , mismatch: 8, identity: 0.742

aatacctcccttacatcaataacaattcccg	CRISPR spacer
ttcatgtcacttacatcaataacaattccgc	Protospacer
  .*. ** ********************  

4. spacer 5.1|3649031|31|NC_019683|PILER-CR matches to NZ_CP026740 (Bacillus megaterium strain YC4-R4 plasmid unnamed4) position: , mismatch: 8, identity: 0.742

aatacctcccttacatcaataacaattcccg	CRISPR spacer
ttcatgtcacttacatcaataacaattccgc	Protospacer
  .*. ** ********************  

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 154227 : 163792 8 Agrobacterium_phage(16.67%) protease NA
DBSCAN-SWA_2 592930 : 601310 8 Enterobacteria_phage(37.5%) NA NA
DBSCAN-SWA_3 654343 : 761112 86 Synechococcus_phage(18.18%) integrase,tail,plate,transposase attL 641802:641836|attR 684663:684697
DBSCAN-SWA_4 1007936 : 1083763 60 Bacillus_phage(14.29%) protease,transposase NA
DBSCAN-SWA_5 1984728 : 2056507 54 Synechococcus_phage(10.0%) protease,transposase,tRNA NA
DBSCAN-SWA_6 3602438 : 3659143 48 Hokovirus(25.0%) protease,transposase,integrase attL 3640702:3640724|attR 3663389:3663411
DBSCAN-SWA_7 3841300 : 3992384 114 Escherichia_phage(12.5%) protease,transposase,tRNA NA
DBSCAN-SWA_8 4073809 : 4125206 60 uncultured_Mediterranean_phage(33.33%) integrase,transposase attL 4077685:4077728|attR 4111374:4111417
DBSCAN-SWA_9 4130815 : 4181978 28 uncultured_Caudovirales_phage(50.0%) integrase,transposase attL 4171219:4171234|attR 4190232:4190247
DBSCAN-SWA_10 4238681 : 4300353 42 Escherichia_phage(50.0%) transposase,tRNA NA
DBSCAN-SWA_11 4313202 : 4374345 57 Prochlorococcus_phage(16.67%) transposase NA
DBSCAN-SWA_12 5016827 : 5072134 50 Flavobacterium_phage(20.0%) integrase,tail,transposase attL 5034220:5034271|attR 5062192:5062243
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage