CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NC_019042	Streptococcus dysgalactiae subsp. equisimilis AC-2713, complete genome	3 crisprs	DEDDh,DinG,csm6,csa3,csn2,cas2,cas1,cas9,WYL,cas4,cas7,cas8c,cas5,cas3	0	28	9	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NC_019042_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_019042_1

1129568-1129670

TypeII

II-A,II-B

Consensus_repeat	Method
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	CRISPRCasFinder

1 spacers

csn2,cas2,cas1,cas9

The CRISPR arrays of NC_019042_1

>merge|NC_019042|1|1129568-1129670|CRISPRCasFinder
GAATTGGGACCATTCAAAACAACATAGCTCTAAAACTGCATGATTGTTTAGTAGGTCATCTATCGAGTTTTGGGACCATTCAAAACAACATAGCTCTAAAACG

>NC_019042|1|1|1129568-1129670|CRISPRCasFinder
GAATTGGGACCATTCAAAACAACATAGCTCTAAAAC	TGCATGATTGTTTAGTAGGTCATCTATCGA
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAACG

Protein	Signature genes	Signature genes Name	Protein_function
NC_019042.1\|WP_014612330.1\|1127091_1128924_-\|elongation-factor-4	unknown	unknown	gnl\|CDD\|235462
NC_019042.1\|WP_003058434.1\|1121450_1121942_-\|PTS-system-mannose/fructose/N-acetylgalactosamine-transporter-subunit-IIB	unknown	unknown	gnl\|CDD\|225976
NC_019042.1\|WP_015057650.1\|1138763_1139393_-\|TIGR01906-family-membrane-protein	unknown	unknown	gnl\|CDD\|226884
NC_019042.1\|WP_015057652.1\|1140918_1142049_-\|oxygen-independent-coproporphyrinogen-III-oxidase	unknown	unknown	gnl\|CDD\|236309
NC_019042.1\|WP_003060137.1\|1128993_1129452_-\|nucleoside-diphosphate-kinase	unknown	unknown	gnl\|CDD\|179085
NC_019042.1\|WP_015057642.1\|1122593_1123613_-\|YeiH-family-putative-sulfate-export-transporter	unknown	unknown	gnl\|CDD\|225411
NC_019042.1\|WP_015057651.1\|1139392_1140157_-\|TIGR01457-family-HAD-type-hydrolase	unknown	unknown	gnl\|CDD\|319832
NC_019042.1\|WP_015057647.1\|1132313_1132976_-\|type-II-A-CRISPR-associated-protein-Csn2	csn2	cd09758_csn2_CAS-II-A	gnl\|CDD\|213408
NC_019042.1\|WP_155115628.1\|1129737_1130843_-\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
NC_019042.1\|WP_003058453.1\|1121961_1122387_-\|PTS-mannose-transporter-subunit-IIA	unknown	unknown	gnl\|CDD\|225446
NC_019042.1\|WP_015057644.1\|1125378_1125609_-\|bacteriocin-ubericin-A	unknown	unknown	gnl\|CDD\|366773
NC_019042.1\|WP_041781580.1\|1132965_1133307_-\|CRISPR-associated-endonuclease-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226043
NC_019042.1\|WP_015057643.1\|1123723_1124893_-\|DUF2974-domain-containing-protein	unknown	unknown	gnl\|CDD\|371412
NC_019042.1\|WP_012767105.1\|1133303_1134173_-\|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|187851
NC_019042.1\|WP_015017097.1\|1140156_1140909_-\|acyl-[acyl-carrier-protein]-thioesterase	unknown	unknown	gnl\|CDD\|226401
NC_019042.1\|WP_015057653.1\|1142110_1142752_-\|hypothetical-protein	unknown	unknown	unknown
NC_019042.1\|WP_015057649.1\|1134172_1138288_-\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	COG3513_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226044
NC_019042.1\|WP_014612329.1\|1126479_1126917_-\|peptide-methionine-(R)-S-oxide-reductase-MsrB	unknown	unknown	gnl\|CDD\|234692
NC_019042.1\|WP_015057641.1\|1120624_1121434_-\|PTS-mannose/fructose/sorbose/N-acetylgalactosamine-transporter-subunit-IIC	unknown	unknown	gnl\|CDD\|226238
NC_019042.1\|WP_003058441.1\|1125082_1125379_-\|bacteriocin-immunity-protein	unknown	unknown	gnl\|CDD\|370205

Protein	Function_ID	Function_description	E-value
NC_019042.1\|WP_014612330.1\|1127091_1128924_-\|elongation-factor-4	gnl\|CDD\|235462	PRK05433, PRK05433, GTP-binding protein LepA; Provisional.	0
NC_019042.1\|WP_003058434.1\|1121450_1121942_-\|PTS-system-mannose/fructose/N-acetylgalactosamine-transporter-subunit-IIB	gnl\|CDD\|225976	COG3444, COG3444, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB [Carbohydrate transport and metabolism].	2.69664e-54
NC_019042.1\|WP_015057650.1\|1138763_1139393_-\|TIGR01906-family-membrane-protein	gnl\|CDD\|226884	COG4478, COG4478, Predicted membrane protein [Function unknown].	2.56291e-78
NC_019042.1\|WP_015057652.1\|1140918_1142049_-\|oxygen-independent-coproporphyrinogen-III-oxidase	gnl\|CDD\|236309	PRK08599, PRK08599, oxygen-independent coproporphyrinogen III oxidase.	0
NC_019042.1\|WP_003060137.1\|1128993_1129452_-\|nucleoside-diphosphate-kinase	gnl\|CDD\|179085	PRK00668, ndk, mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-; Validated.	5.05917e-75
NC_019042.1\|WP_015057642.1\|1122593_1123613_-\|YeiH-family-putative-sulfate-export-transporter	gnl\|CDD\|225411	COG2855, COG2855, Predicted membrane protein [Function unknown].	4.94671e-103
NC_019042.1\|WP_015057651.1\|1139392_1140157_-\|TIGR01457-family-HAD-type-hydrolase	gnl\|CDD\|319832	cd07530, HAD_Pase_UmpH-like, UmpH/NagD family phosphatase, similar to Escherichia coli UmpH UMP phosphatase/NagD nucleotide phosphatase and Mycobacterium tuberculosis Rv1692 glycerol 3-phosphate phosphatase. Escherichia coli UmpH/NagD is a ribonucleoside tri-, di-, and monophosphatase with a preference for purines, it shows peak activity with UMP and functions in UMP-degradation. It is also an effective phosphatase with AMP, GMP and CMP. Mycobacterium tuberculosis phosphatase, Rv1692 is a glycerol 3-phosphate phosphatase. Rv1692 is the final enzyme involved in glycerophospholipid recycling/catabolism. This subfamily belongs to the UmpH/NagD phosphatase family, and to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	4.56e-129
NC_019042.1\|WP_015057647.1\|1132313_1132976_-\|type-II-A-CRISPR-associated-protein-Csn2	gnl\|CDD\|213408	cd09758, Csn2, CRISPR/Cas system-associated protein Csn2. Csn2 is a Nmeni subtype-specific Cas protein, which may function in the adaptation process which mediates the incorporation of foreign nucleic acids into the microbial host genome. Csn 2 may interact directly with double-stranded DNA. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA. Csn2 has been predicted to be a functional analog of Cas4 based on anti-correlated phyletic patterns; also known as SPy1049 family.	2.38204e-121
NC_019042.1\|WP_155115628.1\|1129737_1130843_-\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	1.32195e-52
NC_019042.1\|WP_003058453.1\|1121961_1122387_-\|PTS-mannose-transporter-subunit-IIA	gnl\|CDD\|225446	COG2893, ManX, Phosphotransferase system, mannose/fructose-specific component IIA [Carbohydrate transport and metabolism].	4.42496e-29
NC_019042.1\|WP_015057644.1\|1125378_1125609_-\|bacteriocin-ubericin-A	gnl\|CDD\|366773	pfam01721, Bacteriocin_II, Class II bacteriocin. The bacteriocins are small peptides that inhibit the growth of various bacteria. Bacteriocins of lactic acid bacteria may inhibit their target cells by permeabilising the cell membrane.	1.13099e-05
NC_019042.1\|WP_041781580.1\|1132965_1133307_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	1.11891e-55
NC_019042.1\|WP_015057643.1\|1123723_1124893_-\|DUF2974-domain-containing-protein	gnl\|CDD\|371412	pfam11187, DUF2974, Protein of unknown function (DUF2974). This bacterial family of proteins has no known function.	2.61476e-77
NC_019042.1\|WP_012767105.1\|1133303_1134173_-\|type-II-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|187851	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer intergration. Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	3.47501e-131
NC_019042.1\|WP_015017097.1\|1140156_1140909_-\|acyl-[acyl-carrier-protein]-thioesterase	gnl\|CDD\|226401	COG3884, FatA, Acyl-ACP thioesterase [Lipid metabolism].	4.56367e-107
NC_019042.1\|WP_015057649.1\|1134172_1138288_-\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	gnl\|CDD\|226044	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms].	0
NC_019042.1\|WP_014612329.1\|1126479_1126917_-\|peptide-methionine-(R)-S-oxide-reductase-MsrB	gnl\|CDD\|234692	PRK00222, PRK00222, peptide-methionine (R)-S-oxide reductase MsrB.	7.49483e-84
NC_019042.1\|WP_015057641.1\|1120624_1121434_-\|PTS-mannose/fructose/sorbose/N-acetylgalactosamine-transporter-subunit-IIC	gnl\|CDD\|226238	COG3715, ManY, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC [Carbohydrate transport and metabolism].	1.26639e-75
NC_019042.1\|WP_003058441.1\|1125082_1125379_-\|bacteriocin-immunity-protein	gnl\|CDD\|370205	pfam08951, EntA_Immun, Enterocin A Immunity. Gram-positive lactobacilli produce bacteriocins to kill closely-related competitor species. To protect themselves from the bacteriocidal activity of this molecule they co-express an immunity protein (for discussion of this operon see Bacteriocin_IIc pfam10439). The immunity protein structure is a soluble, cytoplasmic, antiparallel four alpha-helical globular bundle with a fifth, more flexible and more divergent C-terminal helical hair-pin. The C-terminal hair-pin recognizes the C-terminus of the producer bacteriocin and this interaction is sufficient to dis-orient the bacteriocin within the membrane and close up the permeabilising pore that on its own the bacteriocin creates. These immunity proteins interact in the same way with other bacteriocins, family Bacteriocin_II, pfam01721. Since many enterococci can produce more than one bacteriocin it seems likely that the whole operon can be carried on transferable plasmids.	0.000236171

>NC_019042.1|WP_003060137.1|1128993_1129452_-|nucleoside-diphosphate-kinase
MEQTFFMIKPDGVERGLVGEVLRRIERRGFTFERLELRQASPELLAKHYEALVTKPFYPELEAYMTSGPVLIGVLSGNRVISSWRTMMGVTNPKDALPGTIRGDFAQAPGDDGGIFNVVHGSDSRDSARREIALWFNQAELDSSAIFPKDNQ
>NC_019042.1|WP_014612330.1|1127091_1128924_-|elongation-factor-4
MNSQDLKKRQEKIRNFSIIAHIDHGKSTLADRILEKTETVSSREMQAQLLDSMDLERERGITIKLNAIELNYTAKDGETYIFHLIDTPGHVDFTYEVSRSLAACEGAILVVDAAQGIEAQTLANVYLALDNDLEILPVINKIDLPAADPERVRHEVEDVIGLDASEAVLASAKAGIGIEEILEQIVEKVPAPTGDVDSPLQALIFDSVYDAYRGVILQVRIVNGIVKPGDKIKMMSNGKTFDVTEVGIFTPKAVGRDFLATGDVGYVAASIKTVADTRVGDTVTLANNPAKEALHGYKQMNPMVFAGIYPIESNKYNDLREALEKLQLNDASLQFEPETSQALGFGFRCGFLGLLHMDVIQERLEREFNIDLIMTAPSVVYHVHTTDGDMIEVSNPSEFPDPTRVASIEEPYVKAQIMVPQEFVGAVMELSQRKRGDFVTMDYIDDNRVNVIYQIPLAEIVFDFFDKLKSSTRGYASFDYEISEYRKSQLVKMDILLNGDKVDALSFIVHKEFAYERGKIIVEKLKKIIPRQQFEVPIQAAIGQKIVARSDIKALRKNVLAKCYGGDVSRKRKLLEKQKAGKKRMKSIGSVEVPQEAFLSVLSMDEDAKK
>NC_019042.1|WP_014612329.1|1126479_1126917_-|peptide-methionine-(R)-S-oxide-reductase-MsrB
METKDDLKKRIGDLSYEVTQHAATERPFTGKYDDFFEKGIYVDIVSGEVLFSSLDKFNSGCGWPAFSKPIENRMVTNHDDSSYGMRRVEVKSREAESHLGHVFSDGPQEAGGLRYCINSAALKFIPYGQMEKEGYAQWLTLFDEK
>NC_019042.1|WP_015057644.1|1125378_1125609_-|bacteriocin-ubericin-A
MNTKIFEKFDFMDNEKLAYIDGGAGSGKMVYQGNGLYCNKVKCWVNWAETWTTIANNSVMNVLTGGNAGWHPGGAL
>NC_019042.1|WP_003058441.1|1125082_1125379_-|bacteriocin-immunity-protein
MSGLNWFSGGNERQQQASLLIKDLVADLKQSGGKEPLQKVLLSFDEELKRGESSIPFILSRMTVAVSTVLKEHQITLSAKESDQLDDLYALLQIRYGY
>NC_019042.1|WP_015057643.1|1123723_1124893_-|DUF2974-domain-containing-protein
MATLLDYIKTNGHRDYHSLALNELDVAVINEIGYLTFDELVADDNHLEATIKLSQLPLLQTREIKGTPYDFLNTKERLDLFQMMCQSKRFSELTLSHYINDINTEFEKQFAAMVFRLPSIDYTQLVFRGTDDSLIGWKEDFKLTYMREIPAHRSAIDYLKTYHTYYPNQKLVLSGHSKGGNLALYAASFVTKNVQASLKDIYLFDSPGLIKEFLTHPGYQAIRRRLVVIKPQDAIIGVMLYCDVPEKIVQSQSYGLLQHQMVNWQITPNAQFKRAPKRSALSYDLEETFKDWTNQLSKQDLKLLCDTFFDCLASSGITSLNAFSLDDKAFLTLMRVISSLQSIDHEKKKVMVKSLHQLMVTYGSYRRRDISENIHNRLQQLLTFTKGIK
>NC_019042.1|WP_015057642.1|1122593_1123613_-|YeiH-family-putative-sulfate-export-transporter
MSTYLRKLPGLLLCLLLALPAWYLGRLFPIIGAPVFAILLGMLLALFYHHRDKTKEGISFTSKYILQTAVVLLGFGLNLTQVMAVGMQSLPIIVSTVATALLVAYGLQKWLGLDVNTATLVGVGSSICGGSAIAATAPVIKAKDDEIAKAISVIFLFNILAALLFPSLGQLLGLSNEGFAIFAGTAVNDTSSVTATATAWDAIHHSNTLDGATIVKLTRTLAIIPITLGLSLYRAKKEHENVTEEGFSLSKSFPRFILFFLLASLITTLMTSFGVSADVFHSLKELSKFFIVMAMAAIGLNTNLVKLIKTGGQAILLGAICWVAITLVSLGMQFALGIW
>NC_019042.1|WP_003058453.1|1121961_1122387_-|PTS-mannose-transporter-subunit-IIA
MKRKFLIGSHGRLASGLQSSIDILAGMGQSLEIIDAYVDDSDYTSQIDDFIAGVAADEQGLIFTDLLGGSVNQKMVTAVMASGKDNIFLITNSNLATLLSVMFLNPDEALTKDKIVTVINESQVQLVDLSPATDSEDDFFD
>NC_019042.1|WP_003058434.1|1121450_1121942_-|PTS-system-mannose/fructose/N-acetylgalactosamine-transporter-subunit-IIB
MITQIRVDDRLIHGQVAVVWTKELNAPLLVVANDEAAKNEITQMTLKMAVPNGMKLLIRSVEESIKLFNDPRAKDKRIFVIVNSVKDACAIAKEVPDLEAVNVANVGRFDKSDPASKVKVTPSLLLNPEEMAAAKELVSLPELDVFNQVLPSNTKVHLSQLVN
>NC_019042.1|WP_015057641.1|1120624_1121434_-|PTS-mannose/fructose/sorbose/N-acetylgalactosamine-transporter-subunit-IIC
MLVPATMAALAVLICFGGNYLTGQSMMERPLVVGLVTGLLLGDMKVGILMGASLEALFLGNVNIGGVIAAEPVTATAMATTFTIISHIDQKAAMTLAVPIGMLAAFVVMFLKNVFMNIFAPMVDKAAAANHQGKLVMLHYGTWIIYYLIIASISFIGILVGSGPVNAFVEHIPQNLMNGLSAAGGLLPAVGFAMLMKLLWTNKLAVFYLLGFVLTAYLKLPAVAVAALGAVICVISSQRDLELDAITKGAFSNQTSFDSKESEEEDFFA
>NC_019042.1|WP_155115628.1|1129737_1130843_-|IS3-family-transposase
MSRKIRRHFTDDFKQQIVDLHNAGMKRSELIKEYELTPSTFDKWVRQAKLTGSFKSVDNMTDEQRELIQLRKRNKELEMQLDILKQAAVIMAPKRQVITANKDKYSISAMCRWLNIPRSSYYYQAVDPVSEAELEDKITYIFFESKSRYGARKIKKCLEKDGIILSRRRIRRIMERLHLVSVYQKAAFKPHSKGKNEAPIPNRLDRQFDQERPLEALVTDLTYVRVDRRWAYVCLIIDLFNREIIGLSVGWHKTAELVKQAIQSISYALTKVKMFHSDRGKEFDNQLIDEMLEAFGSTRSLSQAGCPYDNAVAESTYRSFKLEFINQETFQSLEELALKTKDYVHWWNYHRIHGSLNYQTPMTKRIIA
>NC_019042.1|WP_015057647.1|1132313_1132976_-|type-II-A-CRISPR-associated-protein-Csn2
MNLNFPLLDEPIPLRGGTILVLEDVCVFSKIVQHCYQYEEDSELKFFDHKMKAIKESEIMLVTDILGFDVNSPTILKLIHADLESQFNEKPEVKSMIEKLVATITELIVFECLENELDLEYDEITILELIKSLGVKVETQSDTIFEKCLEILQIFKYLTKKKLLIFVNSGAFLTKDEVANLQEYISLTNLTVLFLEARELYDFPQYILDEDYFLITKNMV
>NC_019042.1|WP_041781580.1|1132965_1133307_-|CRISPR-associated-endonuclease-Cas2
MSYRYMRMILMFDMPTDTAEERKVYRKFRKFLLSEGFIMHQFSIYSKLLLNNTANNAMIGRLRENNPHKGNITLLTVTEKQFARMIYLHGERNNCIANSDERLVFLGEVFDES
>NC_019042.1|WP_012767105.1|1133303_1134173_-|type-II-CRISPR-associated-endonuclease-Cas1
MAGWRTVVVNTHSKLSYKNNHLIFKDAYKTELIHLSEIDILLLETTDIVLSTMLVKRLVDENVLVIFCDNKRLPTAMLMPFYGRHDSSLQLGKQMSWSEEVKSEVWTTIIAQKILNQSCYLGVCSYFEKSQSIMDLYHGLELFDPSNREGHAARIYFNTLFGNDFSREQDNVINAGLDYGYTLLLSMFAREVVVSGCMTQFGLKHANQFNQFNFASDIMEPFRPLVDKIIFENRNQPFPKIKRELFTLFSDTFLYNGKEMYLTNIVSDYTKKVVKALNNEGKGVPEFRI
>NC_019042.1|WP_015057649.1|1134172_1138288_-|type-II-CRISPR-RNA-guided-endonuclease-Cas9
MDKKYSIGLDIGTNSVGWAVITDDYKVPSKKFKVLGNTDRHSIKKNLIGALLFDSGETAEATRLKRTARRRYTRRKNRIRYLQEIFSSEMSKVDDSFFHRLEESFLVEEDKKHERHPIFGNIVDEVAYHEKYPTIYHLRKKLADSTDKADLRLIYLALAHMIKFRGHFLIEGDLNPDNSDMDKLFIQLVQTYNQLFEENPINASRVDAKAILSARLSKSRRLENLIAQLPGEKRNGLFGNLIALSLGLTPNFKSNFDLAEDAKLQLSKDTYDDDLDNLLAQIGDQYADLFLAAKNLSDAILLSDILRVNSEITKAPLSASMIKRYDEHHQDLTLLKALVRQQLPEKYKEIFFDQSKNGYAGYIDGGASQEEFYKFIKPILEKMDGTEELLAKLNREDLLRKQRTFDNGSIPHQIHLGELHAILRRQEDFYPFLKDNREKIEKILTFRIPYYVGPLARGNSRFAWMTRKSEETITPWNFEEVVDKGASAQSFIERMTNFDKNLPNEKVLPKHSLLYEYFTVYNELTKVKYVTEGMRKPEFLSGKQKEAIVDLLFKTNRKVTVKQLKEDYFKKIECFDSVEISGVEDRFNASLGTYHDLLKIIKDKDFLDNEENEDILEDIVLTLTLFEDKEMIEERLKKYANLFDDKVMKQLKRRHYTGWGRLSRKLINGIRDKQSGKTILDFLKSDGFANRNFMQLINDDSLTFKEAIQKAQVSGQGHSLHEQIANLAGSPAIKKGILQSVKVVDELVKVMGHKPENIVIEMARENQTTQKGQKNSRERMKRIEEGIKELGSQILKEHPVENTQLQNEKLYLYYLQNGRDMYVDQELDINRLSDYDVDHIVPQSFIKDDSIDNKVLTRSDKNRGKSDNVPSEEVVKKMKNYWRQLLNAKLITQRKFDNLTKAERGGLSELDKAGFIKRQLVETRQITKHVAQILDSRMNTKYDENDKLIREVKVITLKSKLVSDFRKDFQFYKVREINNYHHAHDAYLNAVVGTALIKKYPKLESEFVYGDYKVYDVRKMIAKSEQEIGKATAKRFFYSNIMNFFKTEITLANGEIRKRPLIETNEETGEIVWDKGRDFATVRKVLSMPQVNIVKKTEVQTGALTNESIYARGSFDKLISRKHRFESSKYGGFGSPTVTYSVLVVAKSKVQDGKVKKIKTGKELIGITLLDKLVFEKNPLKFIEDKGYGNVQIDKCIKLPKYSLFEFENGTRRMLASVMANNNSRGDLQKANEMFLPAKLVTLLYHAHKIESSKELEHEAYILDHYNDLYQLLSYIERFASLYVDVEKNISKVKELFSNIESYSISEICSSVINLLTLTASGAPADFKFLGTTIPRKRYGSPQSILSSTLIHQSITGLYETRIDLSQLGGD
>NC_019042.1|WP_015057650.1|1138763_1139393_-|TIGR01906-family-membrane-protein
MVENTKLLCSWLWLLALAILMTIYSAWLWYPLEVEYLKLEQVVFMSKDAILHNYNGLLNYLTNPFETSLTFASFRSSTDGLKHFADVKWLFHLTQVIFLGFLYPTVKDFKQRFKTKSFWSIQRPLMIAALFPLMIGLMASVIGFENFFTLFHKVLFVGDSNWLFDPLKDPVIWILPEVFFLHCFLFFMTVYEIILWSLVGLARWQRPKI
>NC_019042.1|WP_015057651.1|1139392_1140157_-|TIGR01457-family-HAD-type-hydrolase
MSYKGYLIDLDGTIYQGKNRIPAGERFIKRLQERGIPYLLVTNNTTRTPEMVQDMLSKQFNVETGIETIYTATMATVDYMNDMNRGKTAYVIGETGLKSAIAAAGYVEELENPAYVVVGLDSQVTYEMLAIATLAIQKGALFIGTNPDLNIPTERGLMPGAGALNALLEAATRVKPVFIGKPNAIIMNKSLEVLGVKRSEAVMVGDNYLTDIMAGIQNDIATILVTTGFTRPEEVPTLPIQPDHVLSSLDEWRL
>NC_019042.1|WP_015017097.1|1140156_1140909_-|acyl-[acyl-carrier-protein]-thioesterase
MGLSYQEELTLPFELCDVKSDIKLPLLLDYCLTVSGRQSAQLGRSNDYLLEQYGLIWIVTDYEATIHRLPHFQETITIETKALSYNKFFCYRQFYIYDQEGGLLVDILAYFALLNPDTRKVATIPEDLVAPFETDFVKKLHRVPKMPLLEQSIDRDYYVRYFDIDMNGHVNNSKYLDWMYDVLGYEFLKAHEPLRMTLKYVKEVSPGGQITSSYHLDQLTSYHQITSDGQLNAQAMIEWRAIKQTESEID
>NC_019042.1|WP_015057652.1|1140918_1142049_-|oxygen-independent-coproporphyrinogen-III-oxidase
MSKKPTSAYVHIPFCTQICYYCDFSKVFIQNQPVDAYLEALIQEFESYDIHDLKTLYIGGGTPTAITADQLEYLLSHLERNLNLDDLEEFTIEANPGDLTPDKIEVLEHSAVNRISLGVQTFNNKQLKQIGRSHNEEQIYSTIANLKTAGFHNISIDLIYALPGQTLAQVKENVAKALALDIPHLSLYSLILEHHTVFMNKMRRGKLNLPTEDLEAEMFEYIISEMEANGFEHYEISNFTKPGFESRHNLMYWDNVEYFGCGAGASGYLNGIRYQNRVPIQHYLKAVEAGNARLNEEVLRKEEMMEEELFLGLRKKTGVSIQRFQEKFGMSFEERYGTIVRDLQDQGLLVKDDAFVRMTKKGLFLGDSVAERFILD
>NC_019042.1|WP_015057653.1|1142110_1142752_-|hypothetical-protein
MTKQQIEKLADLLPPFAAKLYLDMIPEFQEGYASYVYQTQKEDTQNRRIKQLTKSFARLLDTPSFYVMPLSVQVGKQLLRNEEIACHSLSSVEAIQAFEAAVEDEKEVLQLLRNGSRLALLVLEEANETVHMDLGILTKVEQKVISPAMLTAIEEYLLATTEGSALQLTVTVEQGAARTFYQAHGFHQKADDLVFKPTDGKLICQMVKDLFKA

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Crispr_ID: NC_019042_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_019042_2

1130921-1132212

TypeII

II-A,II-B

Consensus_repeat	Method
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	PILER-CR
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	CRISPRCasFinder
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	CRT
CTTGTTTTGGGACCATTCAAAACAACATAGCTCTAAAACA	PILER-CR

19 spacers

csn2,cas2,cas1,cas9

The CRISPR arrays of NC_019042_2

>merge|NC_019042|2|1130921-1132212|PILER-CR,CRISPRCasFinder,CRT,PILER-CR
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAACACATCTTGGATGAGGATAACGTCCCAAAGGGTTTTGGGACCATTCAAAACAACATAGCTCTAAAACAAGTTGAAAAATGGAGACCACTCGTTGAAAGTTTTGGGACCATTCAAAACAACATAGCTCTAAAACCAGCTAGTGGCTATGCGGAGTTACTTATCCGTTTTGGGACCATTCAAAACAACATAGCTCTAAAACACAATAGTCCGACCTTGCGCATATCTTTGCGTTTTGGGACCATTCAAAACAACATAGCTCTAAAACAGTGACCCCGTCGTTAACCGTGTTGTTGTAGTTTTGGGACCATTCAAAACAACATAGCTCTAAAACTTGGTATTCGTGGGGTGCTTGAATGAGCAAGTTTTGGGACCATTCAAAACAACATAGCTCTAAAACTAGATTTTTTATACTCGCTCTCTGAGTATGGTTTTGGGACCATTCAAAACAACATAGCTCTAAAACCAAGAGCGAGGGCATTTGTCTTATCTAATTGTTTTGGGACCATTCAAAACAACATAGCTCTAAAACTTTACACGTTTTAGAAATTGCCTATCGTACGTTTTGGGACCATTCAAAACAACATAGCTCTAAAACACACCAACGGTCGTTTTCCCAGCGGCAGTTGTTTTGGGACCATTCAAAACAACATAGCTCTAAAACAAATTCCAGTCATATAATTGCTATGCTCGTGTTTTGGGACCATTCAAAACAACATAGCTCTAAAACGATGTAATCATGCGTGATACACGTTCATCTGTTTTGGGACCATTCAAAACAACATAGCTCTAAAACGATGTAATCATGCGTGATACACGTTCATCTGTTTTGGGACCATTCAAAACAACATAGCTCTAAAACAGATAGGTAAAACCCGCTGCCAAAAAGACTGTTTTGGGACCATTCAAAACAACATAGCTCTAAAACATAGTTTTACGTGTTTTTAAGTTTTGAGTTGTTTTGGGACCATTCAAAACAACATAGCTCTAAAACTCAATACAAGCATCTGCGGACGATTGCCTAGTTTTGGGACCATTCAAAACAACATAGCTCTAAAACACGAGAACGGGGATAAGCACGAGATTCCTCGTTTTGGGACCATTCAAAACAACATAGCTCTAAAACACCTCTGCTGTATCAATAGCATCACGACTTGTTTTGGGACCATTCAAAACAACATAGCTCTAAAACAAAAGTTTATCCAAAAATTCTTGTGAAATTTGTTTTGGGACCATTCAAAACAACATAGCTCTAAAACC

>NC_019042|2|1|1130921-1132211|PILER-CR
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	ACATCTTGGATGAGGATAACGTCCCAAAGG
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	AAGTTGAAAAATGGAGACCACTCGTTGAAA
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	CAGCTAGTGGCTATGCGGAGTTACTTATCC
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	ACAATAGTCCGACCTTGCGCATATCTTTGC
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	AGTGACCCCGTCGTTAACCGTGTTGTTGTA
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	TTGGTATTCGTGGGGTGCTTGAATGAGCAA
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	TAGATTTTTTATACTCGCTCTCTGAGTATG
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	CAAGAGCGAGGGCATTTGTCTTATCTAATT
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	TTTACACGTTTTAGAAATTGCCTATCGTAC
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	ACACCAACGGTCGTTTTCCCAGCGGCAGTT
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	AAATTCCAGTCATATAATTGCTATGCTCGT
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	GATGTAATCATGCGTGATACACGTTCATCT
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	GATGTAATCATGCGTGATACACGTTCATCT
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	AGATAGGTAAAACCCGCTGCCAAAAAGACT
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	ATAGTTTTACGTGTTTTTAAGTTTTGAGTT
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	TCAATACAAGCATCTGCGGACGATTGCCTA
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	ACGAGAACGGGGATAAGCACGAGATTCCTCGTTTTGGGACCATTCAAAACAACATAGCTCTAAAACACCTCTGCTGTATCAATAGCATCACGACTTGTTTTGGGACCATTCAAAACAACATAGCTCTAAAACAAAAGTTTATCCAAAAATTCTTGTGAAATTT
	CCTCTGCTGTATCAATAGCATCACGA
CTTGTTTTGGGACCATTCAAAACAACATAGCTCTAAAACA	AAAGTTTATCCAAAAATTCTTGTGAAA
TTTGTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC

>NC_019042|2|2|1130921-1132211|CRISPRCasFinder
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	ACATCTTGGATGAGGATAACGTCCCAAAGG
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	AAGTTGAAAAATGGAGACCACTCGTTGAAA
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	CAGCTAGTGGCTATGCGGAGTTACTTATCC
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	ACAATAGTCCGACCTTGCGCATATCTTTGC
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	AGTGACCCCGTCGTTAACCGTGTTGTTGTA
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	TTGGTATTCGTGGGGTGCTTGAATGAGCAA
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	TAGATTTTTTATACTCGCTCTCTGAGTATG
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	CAAGAGCGAGGGCATTTGTCTTATCTAATT
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	TTTACACGTTTTAGAAATTGCCTATCGTAC
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	ACACCAACGGTCGTTTTCCCAGCGGCAGTT
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	AAATTCCAGTCATATAATTGCTATGCTCGT
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	GATGTAATCATGCGTGATACACGTTCATCT
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	GATGTAATCATGCGTGATACACGTTCATCT
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	AGATAGGTAAAACCCGCTGCCAAAAAGACT
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	ATAGTTTTACGTGTTTTTAAGTTTTGAGTT
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	TCAATACAAGCATCTGCGGACGATTGCCTA
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	ACGAGAACGGGGATAAGCACGAGATTCCTC
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	ACCTCTGCTGTATCAATAGCATCACGACTT
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	AAAAGTTTATCCAAAAATTCTTGTGAAATTT
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC

>NC_019042|2|1|1130921-1132211|CRT
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	ACATCTTGGATGAGGATAACGTCCCAAAGG
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	AAGTTGAAAAATGGAGACCACTCGTTGAAA
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	CAGCTAGTGGCTATGCGGAGTTACTTATCC
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	ACAATAGTCCGACCTTGCGCATATCTTTGC
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	AGTGACCCCGTCGTTAACCGTGTTGTTGTA
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	TTGGTATTCGTGGGGTGCTTGAATGAGCAA
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	TAGATTTTTTATACTCGCTCTCTGAGTATG
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	CAAGAGCGAGGGCATTTGTCTTATCTAATT
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	TTTACACGTTTTAGAAATTGCCTATCGTAC
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	ACACCAACGGTCGTTTTCCCAGCGGCAGTT
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	AAATTCCAGTCATATAATTGCTATGCTCGT
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	GATGTAATCATGCGTGATACACGTTCATCT
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	GATGTAATCATGCGTGATACACGTTCATCT
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	AGATAGGTAAAACCCGCTGCCAAAAAGACT
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	ATAGTTTTACGTGTTTTTAAGTTTTGAGTT
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	TCAATACAAGCATCTGCGGACGATTGCCTA
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	ACGAGAACGGGGATAAGCACGAGATTCCTC
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	ACCTCTGCTGTATCAATAGCATCACGACTT
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	AAAAGTTTATCCAAAAATTCTTGTGAAATTT
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC

>NC_019042|2|2|1132040-1132212|PILER-CR
	ACATCTTGGATGAGGATAACGTCCCAAAGG
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	AAGTTGAAAAATGGAGACCACTCGTTGAAA
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	CAGCTAGTGGCTATGCGGAGTTACTTATCC
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	ACAATAGTCCGACCTTGCGCATATCTTTGC
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	AGTGACCCCGTCGTTAACCGTGTTGTTGTA
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	TTGGTATTCGTGGGGTGCTTGAATGAGCAA
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	TAGATTTTTTATACTCGCTCTCTGAGTATG
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	CAAGAGCGAGGGCATTTGTCTTATCTAATT
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	TTTACACGTTTTAGAAATTGCCTATCGTAC
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	ACACCAACGGTCGTTTTCCCAGCGGCAGTT
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	AAATTCCAGTCATATAATTGCTATGCTCGT
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	GATGTAATCATGCGTGATACACGTTCATCT
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	GATGTAATCATGCGTGATACACGTTCATCT
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	AGATAGGTAAAACCCGCTGCCAAAAAGACT
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	ATAGTTTTACGTGTTTTTAAGTTTTGAGTT
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	TCAATACAAGCATCTGCGGACGATTGCCTA
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	ACGAGAACGGGGATAAGCACGAGATTCCTCGTTTTGGGACCATTCAAAACAACATAGCTCTAAAACACCTCTGCTGTATCAATAGCATCACGACTTGTTTTGGGACCATTCAAAACAACATAGCTCTAAAACAAAAGTTTATCCAAAAATTCTTGTGAAATTT
	CCTCTGCTGTATCAATAGCATCACGA
CTTGTTTTGGGACCATTCAAAACAACATAGCTCTAAAACA	AAAGTTTATCCAAAAATTCTTGTGAAA
TTTGTTTTGGGACCATTCAAAACAACATAGCTCTAAAACC

Protein	Signature genes	Signature genes Name	Protein_function
NC_019042.1\|WP_014612330.1\|1127091_1128924_-\|elongation-factor-4	unknown	unknown	gnl\|CDD\|235462
NC_019042.1\|WP_003058434.1\|1121450_1121942_-\|PTS-system-mannose/fructose/N-acetylgalactosamine-transporter-subunit-IIB	unknown	unknown	gnl\|CDD\|225976
NC_019042.1\|WP_015057650.1\|1138763_1139393_-\|TIGR01906-family-membrane-protein	unknown	unknown	gnl\|CDD\|226884
NC_019042.1\|WP_015057652.1\|1140918_1142049_-\|oxygen-independent-coproporphyrinogen-III-oxidase	unknown	unknown	gnl\|CDD\|236309
NC_019042.1\|WP_003056620.1\|1142875_1144231_-\|phosphoglucosamine-mutase	unknown	unknown	gnl\|CDD\|237670
NC_019042.1\|WP_003060137.1\|1128993_1129452_-\|nucleoside-diphosphate-kinase	unknown	unknown	gnl\|CDD\|179085
NC_019042.1\|WP_015057642.1\|1122593_1123613_-\|YeiH-family-putative-sulfate-export-transporter	unknown	unknown	gnl\|CDD\|225411
NC_019042.1\|WP_015057651.1\|1139392_1140157_-\|TIGR01457-family-HAD-type-hydrolase	unknown	unknown	gnl\|CDD\|319832
NC_019042.1\|WP_015057647.1\|1132313_1132976_-\|type-II-A-CRISPR-associated-protein-Csn2	csn2	cd09758_csn2_CAS-II-A	gnl\|CDD\|213408
NC_019042.1\|WP_155115628.1\|1129737_1130843_-\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
NC_019042.1\|WP_003058453.1\|1121961_1122387_-\|PTS-mannose-transporter-subunit-IIA	unknown	unknown	gnl\|CDD\|225446
NC_019042.1\|WP_015057644.1\|1125378_1125609_-\|bacteriocin-ubericin-A	unknown	unknown	gnl\|CDD\|366773
NC_019042.1\|WP_041781580.1\|1132965_1133307_-\|CRISPR-associated-endonuclease-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226043
NC_019042.1\|WP_015057643.1\|1123723_1124893_-\|DUF2974-domain-containing-protein	unknown	unknown	gnl\|CDD\|371412
NC_019042.1\|WP_012767105.1\|1133303_1134173_-\|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|187851
NC_019042.1\|WP_015057653.1\|1142110_1142752_-\|hypothetical-protein	unknown	unknown	unknown
NC_019042.1\|WP_015057649.1\|1134172_1138288_-\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	COG3513_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226044
NC_019042.1\|WP_014612329.1\|1126479_1126917_-\|peptide-methionine-(R)-S-oxide-reductase-MsrB	unknown	unknown	gnl\|CDD\|234692
NC_019042.1\|WP_015017097.1\|1140156_1140909_-\|acyl-[acyl-carrier-protein]-thioesterase	unknown	unknown	gnl\|CDD\|226401
NC_019042.1\|WP_003058441.1\|1125082_1125379_-\|bacteriocin-immunity-protein	unknown	unknown	gnl\|CDD\|370205

Protein	Function_ID	Function_description	E-value
NC_019042.1\|WP_014612330.1\|1127091_1128924_-\|elongation-factor-4	gnl\|CDD\|235462	PRK05433, PRK05433, GTP-binding protein LepA; Provisional.	0
NC_019042.1\|WP_003058434.1\|1121450_1121942_-\|PTS-system-mannose/fructose/N-acetylgalactosamine-transporter-subunit-IIB	gnl\|CDD\|225976	COG3444, COG3444, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB [Carbohydrate transport and metabolism].	2.69664e-54
NC_019042.1\|WP_015057650.1\|1138763_1139393_-\|TIGR01906-family-membrane-protein	gnl\|CDD\|226884	COG4478, COG4478, Predicted membrane protein [Function unknown].	2.56291e-78
NC_019042.1\|WP_015057652.1\|1140918_1142049_-\|oxygen-independent-coproporphyrinogen-III-oxidase	gnl\|CDD\|236309	PRK08599, PRK08599, oxygen-independent coproporphyrinogen III oxidase.	0
NC_019042.1\|WP_003056620.1\|1142875_1144231_-\|phosphoglucosamine-mutase	gnl\|CDD\|237670	PRK14316, glmM, phosphoglucosamine mutase; Provisional.	0
NC_019042.1\|WP_003060137.1\|1128993_1129452_-\|nucleoside-diphosphate-kinase	gnl\|CDD\|179085	PRK00668, ndk, mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-; Validated.	5.05917e-75
NC_019042.1\|WP_015057642.1\|1122593_1123613_-\|YeiH-family-putative-sulfate-export-transporter	gnl\|CDD\|225411	COG2855, COG2855, Predicted membrane protein [Function unknown].	4.94671e-103
NC_019042.1\|WP_015057651.1\|1139392_1140157_-\|TIGR01457-family-HAD-type-hydrolase	gnl\|CDD\|319832	cd07530, HAD_Pase_UmpH-like, UmpH/NagD family phosphatase, similar to Escherichia coli UmpH UMP phosphatase/NagD nucleotide phosphatase and Mycobacterium tuberculosis Rv1692 glycerol 3-phosphate phosphatase. Escherichia coli UmpH/NagD is a ribonucleoside tri-, di-, and monophosphatase with a preference for purines, it shows peak activity with UMP and functions in UMP-degradation. It is also an effective phosphatase with AMP, GMP and CMP. Mycobacterium tuberculosis phosphatase, Rv1692 is a glycerol 3-phosphate phosphatase. Rv1692 is the final enzyme involved in glycerophospholipid recycling/catabolism. This subfamily belongs to the UmpH/NagD phosphatase family, and to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	4.56e-129
NC_019042.1\|WP_015057647.1\|1132313_1132976_-\|type-II-A-CRISPR-associated-protein-Csn2	gnl\|CDD\|213408	cd09758, Csn2, CRISPR/Cas system-associated protein Csn2. Csn2 is a Nmeni subtype-specific Cas protein, which may function in the adaptation process which mediates the incorporation of foreign nucleic acids into the microbial host genome. Csn 2 may interact directly with double-stranded DNA. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA. Csn2 has been predicted to be a functional analog of Cas4 based on anti-correlated phyletic patterns; also known as SPy1049 family.	2.38204e-121
NC_019042.1\|WP_155115628.1\|1129737_1130843_-\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	1.32195e-52
NC_019042.1\|WP_003058453.1\|1121961_1122387_-\|PTS-mannose-transporter-subunit-IIA	gnl\|CDD\|225446	COG2893, ManX, Phosphotransferase system, mannose/fructose-specific component IIA [Carbohydrate transport and metabolism].	4.42496e-29
NC_019042.1\|WP_015057644.1\|1125378_1125609_-\|bacteriocin-ubericin-A	gnl\|CDD\|366773	pfam01721, Bacteriocin_II, Class II bacteriocin. The bacteriocins are small peptides that inhibit the growth of various bacteria. Bacteriocins of lactic acid bacteria may inhibit their target cells by permeabilising the cell membrane.	1.13099e-05
NC_019042.1\|WP_041781580.1\|1132965_1133307_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	1.11891e-55
NC_019042.1\|WP_015057643.1\|1123723_1124893_-\|DUF2974-domain-containing-protein	gnl\|CDD\|371412	pfam11187, DUF2974, Protein of unknown function (DUF2974). This bacterial family of proteins has no known function.	2.61476e-77
NC_019042.1\|WP_012767105.1\|1133303_1134173_-\|type-II-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|187851	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer intergration. Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	3.47501e-131
NC_019042.1\|WP_015057649.1\|1134172_1138288_-\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	gnl\|CDD\|226044	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms].	0
NC_019042.1\|WP_014612329.1\|1126479_1126917_-\|peptide-methionine-(R)-S-oxide-reductase-MsrB	gnl\|CDD\|234692	PRK00222, PRK00222, peptide-methionine (R)-S-oxide reductase MsrB.	7.49483e-84
NC_019042.1\|WP_015017097.1\|1140156_1140909_-\|acyl-[acyl-carrier-protein]-thioesterase	gnl\|CDD\|226401	COG3884, FatA, Acyl-ACP thioesterase [Lipid metabolism].	4.56367e-107
NC_019042.1\|WP_003058441.1\|1125082_1125379_-\|bacteriocin-immunity-protein	gnl\|CDD\|370205	pfam08951, EntA_Immun, Enterocin A Immunity. Gram-positive lactobacilli produce bacteriocins to kill closely-related competitor species. To protect themselves from the bacteriocidal activity of this molecule they co-express an immunity protein (for discussion of this operon see Bacteriocin_IIc pfam10439). The immunity protein structure is a soluble, cytoplasmic, antiparallel four alpha-helical globular bundle with a fifth, more flexible and more divergent C-terminal helical hair-pin. The C-terminal hair-pin recognizes the C-terminus of the producer bacteriocin and this interaction is sufficient to dis-orient the bacteriocin within the membrane and close up the permeabilising pore that on its own the bacteriocin creates. These immunity proteins interact in the same way with other bacteriocins, family Bacteriocin_II, pfam01721. Since many enterococci can produce more than one bacteriocin it seems likely that the whole operon can be carried on transferable plasmids.	0.000236171

>NC_019042.1|WP_155115628.1|1129737_1130843_-|IS3-family-transposase
MSRKIRRHFTDDFKQQIVDLHNAGMKRSELIKEYELTPSTFDKWVRQAKLTGSFKSVDNMTDEQRELIQLRKRNKELEMQLDILKQAAVIMAPKRQVITANKDKYSISAMCRWLNIPRSSYYYQAVDPVSEAELEDKITYIFFESKSRYGARKIKKCLEKDGIILSRRRIRRIMERLHLVSVYQKAAFKPHSKGKNEAPIPNRLDRQFDQERPLEALVTDLTYVRVDRRWAYVCLIIDLFNREIIGLSVGWHKTAELVKQAIQSISYALTKVKMFHSDRGKEFDNQLIDEMLEAFGSTRSLSQAGCPYDNAVAESTYRSFKLEFINQETFQSLEELALKTKDYVHWWNYHRIHGSLNYQTPMTKRIIA
>NC_019042.1|WP_003060137.1|1128993_1129452_-|nucleoside-diphosphate-kinase
MEQTFFMIKPDGVERGLVGEVLRRIERRGFTFERLELRQASPELLAKHYEALVTKPFYPELEAYMTSGPVLIGVLSGNRVISSWRTMMGVTNPKDALPGTIRGDFAQAPGDDGGIFNVVHGSDSRDSARREIALWFNQAELDSSAIFPKDNQ
>NC_019042.1|WP_014612330.1|1127091_1128924_-|elongation-factor-4
MNSQDLKKRQEKIRNFSIIAHIDHGKSTLADRILEKTETVSSREMQAQLLDSMDLERERGITIKLNAIELNYTAKDGETYIFHLIDTPGHVDFTYEVSRSLAACEGAILVVDAAQGIEAQTLANVYLALDNDLEILPVINKIDLPAADPERVRHEVEDVIGLDASEAVLASAKAGIGIEEILEQIVEKVPAPTGDVDSPLQALIFDSVYDAYRGVILQVRIVNGIVKPGDKIKMMSNGKTFDVTEVGIFTPKAVGRDFLATGDVGYVAASIKTVADTRVGDTVTLANNPAKEALHGYKQMNPMVFAGIYPIESNKYNDLREALEKLQLNDASLQFEPETSQALGFGFRCGFLGLLHMDVIQERLEREFNIDLIMTAPSVVYHVHTTDGDMIEVSNPSEFPDPTRVASIEEPYVKAQIMVPQEFVGAVMELSQRKRGDFVTMDYIDDNRVNVIYQIPLAEIVFDFFDKLKSSTRGYASFDYEISEYRKSQLVKMDILLNGDKVDALSFIVHKEFAYERGKIIVEKLKKIIPRQQFEVPIQAAIGQKIVARSDIKALRKNVLAKCYGGDVSRKRKLLEKQKAGKKRMKSIGSVEVPQEAFLSVLSMDEDAKK
>NC_019042.1|WP_014612329.1|1126479_1126917_-|peptide-methionine-(R)-S-oxide-reductase-MsrB
METKDDLKKRIGDLSYEVTQHAATERPFTGKYDDFFEKGIYVDIVSGEVLFSSLDKFNSGCGWPAFSKPIENRMVTNHDDSSYGMRRVEVKSREAESHLGHVFSDGPQEAGGLRYCINSAALKFIPYGQMEKEGYAQWLTLFDEK
>NC_019042.1|WP_015057644.1|1125378_1125609_-|bacteriocin-ubericin-A
MNTKIFEKFDFMDNEKLAYIDGGAGSGKMVYQGNGLYCNKVKCWVNWAETWTTIANNSVMNVLTGGNAGWHPGGAL
>NC_019042.1|WP_003058441.1|1125082_1125379_-|bacteriocin-immunity-protein
MSGLNWFSGGNERQQQASLLIKDLVADLKQSGGKEPLQKVLLSFDEELKRGESSIPFILSRMTVAVSTVLKEHQITLSAKESDQLDDLYALLQIRYGY
>NC_019042.1|WP_015057643.1|1123723_1124893_-|DUF2974-domain-containing-protein
MATLLDYIKTNGHRDYHSLALNELDVAVINEIGYLTFDELVADDNHLEATIKLSQLPLLQTREIKGTPYDFLNTKERLDLFQMMCQSKRFSELTLSHYINDINTEFEKQFAAMVFRLPSIDYTQLVFRGTDDSLIGWKEDFKLTYMREIPAHRSAIDYLKTYHTYYPNQKLVLSGHSKGGNLALYAASFVTKNVQASLKDIYLFDSPGLIKEFLTHPGYQAIRRRLVVIKPQDAIIGVMLYCDVPEKIVQSQSYGLLQHQMVNWQITPNAQFKRAPKRSALSYDLEETFKDWTNQLSKQDLKLLCDTFFDCLASSGITSLNAFSLDDKAFLTLMRVISSLQSIDHEKKKVMVKSLHQLMVTYGSYRRRDISENIHNRLQQLLTFTKGIK
>NC_019042.1|WP_015057642.1|1122593_1123613_-|YeiH-family-putative-sulfate-export-transporter
MSTYLRKLPGLLLCLLLALPAWYLGRLFPIIGAPVFAILLGMLLALFYHHRDKTKEGISFTSKYILQTAVVLLGFGLNLTQVMAVGMQSLPIIVSTVATALLVAYGLQKWLGLDVNTATLVGVGSSICGGSAIAATAPVIKAKDDEIAKAISVIFLFNILAALLFPSLGQLLGLSNEGFAIFAGTAVNDTSSVTATATAWDAIHHSNTLDGATIVKLTRTLAIIPITLGLSLYRAKKEHENVTEEGFSLSKSFPRFILFFLLASLITTLMTSFGVSADVFHSLKELSKFFIVMAMAAIGLNTNLVKLIKTGGQAILLGAICWVAITLVSLGMQFALGIW
>NC_019042.1|WP_003058453.1|1121961_1122387_-|PTS-mannose-transporter-subunit-IIA
MKRKFLIGSHGRLASGLQSSIDILAGMGQSLEIIDAYVDDSDYTSQIDDFIAGVAADEQGLIFTDLLGGSVNQKMVTAVMASGKDNIFLITNSNLATLLSVMFLNPDEALTKDKIVTVINESQVQLVDLSPATDSEDDFFD
>NC_019042.1|WP_003058434.1|1121450_1121942_-|PTS-system-mannose/fructose/N-acetylgalactosamine-transporter-subunit-IIB
MITQIRVDDRLIHGQVAVVWTKELNAPLLVVANDEAAKNEITQMTLKMAVPNGMKLLIRSVEESIKLFNDPRAKDKRIFVIVNSVKDACAIAKEVPDLEAVNVANVGRFDKSDPASKVKVTPSLLLNPEEMAAAKELVSLPELDVFNQVLPSNTKVHLSQLVN
>NC_019042.1|WP_015057647.1|1132313_1132976_-|type-II-A-CRISPR-associated-protein-Csn2
MNLNFPLLDEPIPLRGGTILVLEDVCVFSKIVQHCYQYEEDSELKFFDHKMKAIKESEIMLVTDILGFDVNSPTILKLIHADLESQFNEKPEVKSMIEKLVATITELIVFECLENELDLEYDEITILELIKSLGVKVETQSDTIFEKCLEILQIFKYLTKKKLLIFVNSGAFLTKDEVANLQEYISLTNLTVLFLEARELYDFPQYILDEDYFLITKNMV
>NC_019042.1|WP_041781580.1|1132965_1133307_-|CRISPR-associated-endonuclease-Cas2
MSYRYMRMILMFDMPTDTAEERKVYRKFRKFLLSEGFIMHQFSIYSKLLLNNTANNAMIGRLRENNPHKGNITLLTVTEKQFARMIYLHGERNNCIANSDERLVFLGEVFDES
>NC_019042.1|WP_012767105.1|1133303_1134173_-|type-II-CRISPR-associated-endonuclease-Cas1
MAGWRTVVVNTHSKLSYKNNHLIFKDAYKTELIHLSEIDILLLETTDIVLSTMLVKRLVDENVLVIFCDNKRLPTAMLMPFYGRHDSSLQLGKQMSWSEEVKSEVWTTIIAQKILNQSCYLGVCSYFEKSQSIMDLYHGLELFDPSNREGHAARIYFNTLFGNDFSREQDNVINAGLDYGYTLLLSMFAREVVVSGCMTQFGLKHANQFNQFNFASDIMEPFRPLVDKIIFENRNQPFPKIKRELFTLFSDTFLYNGKEMYLTNIVSDYTKKVVKALNNEGKGVPEFRI
>NC_019042.1|WP_015057649.1|1134172_1138288_-|type-II-CRISPR-RNA-guided-endonuclease-Cas9
MDKKYSIGLDIGTNSVGWAVITDDYKVPSKKFKVLGNTDRHSIKKNLIGALLFDSGETAEATRLKRTARRRYTRRKNRIRYLQEIFSSEMSKVDDSFFHRLEESFLVEEDKKHERHPIFGNIVDEVAYHEKYPTIYHLRKKLADSTDKADLRLIYLALAHMIKFRGHFLIEGDLNPDNSDMDKLFIQLVQTYNQLFEENPINASRVDAKAILSARLSKSRRLENLIAQLPGEKRNGLFGNLIALSLGLTPNFKSNFDLAEDAKLQLSKDTYDDDLDNLLAQIGDQYADLFLAAKNLSDAILLSDILRVNSEITKAPLSASMIKRYDEHHQDLTLLKALVRQQLPEKYKEIFFDQSKNGYAGYIDGGASQEEFYKFIKPILEKMDGTEELLAKLNREDLLRKQRTFDNGSIPHQIHLGELHAILRRQEDFYPFLKDNREKIEKILTFRIPYYVGPLARGNSRFAWMTRKSEETITPWNFEEVVDKGASAQSFIERMTNFDKNLPNEKVLPKHSLLYEYFTVYNELTKVKYVTEGMRKPEFLSGKQKEAIVDLLFKTNRKVTVKQLKEDYFKKIECFDSVEISGVEDRFNASLGTYHDLLKIIKDKDFLDNEENEDILEDIVLTLTLFEDKEMIEERLKKYANLFDDKVMKQLKRRHYTGWGRLSRKLINGIRDKQSGKTILDFLKSDGFANRNFMQLINDDSLTFKEAIQKAQVSGQGHSLHEQIANLAGSPAIKKGILQSVKVVDELVKVMGHKPENIVIEMARENQTTQKGQKNSRERMKRIEEGIKELGSQILKEHPVENTQLQNEKLYLYYLQNGRDMYVDQELDINRLSDYDVDHIVPQSFIKDDSIDNKVLTRSDKNRGKSDNVPSEEVVKKMKNYWRQLLNAKLITQRKFDNLTKAERGGLSELDKAGFIKRQLVETRQITKHVAQILDSRMNTKYDENDKLIREVKVITLKSKLVSDFRKDFQFYKVREINNYHHAHDAYLNAVVGTALIKKYPKLESEFVYGDYKVYDVRKMIAKSEQEIGKATAKRFFYSNIMNFFKTEITLANGEIRKRPLIETNEETGEIVWDKGRDFATVRKVLSMPQVNIVKKTEVQTGALTNESIYARGSFDKLISRKHRFESSKYGGFGSPTVTYSVLVVAKSKVQDGKVKKIKTGKELIGITLLDKLVFEKNPLKFIEDKGYGNVQIDKCIKLPKYSLFEFENGTRRMLASVMANNNSRGDLQKANEMFLPAKLVTLLYHAHKIESSKELEHEAYILDHYNDLYQLLSYIERFASLYVDVEKNISKVKELFSNIESYSISEICSSVINLLTLTASGAPADFKFLGTTIPRKRYGSPQSILSSTLIHQSITGLYETRIDLSQLGGD
>NC_019042.1|WP_015057650.1|1138763_1139393_-|TIGR01906-family-membrane-protein
MVENTKLLCSWLWLLALAILMTIYSAWLWYPLEVEYLKLEQVVFMSKDAILHNYNGLLNYLTNPFETSLTFASFRSSTDGLKHFADVKWLFHLTQVIFLGFLYPTVKDFKQRFKTKSFWSIQRPLMIAALFPLMIGLMASVIGFENFFTLFHKVLFVGDSNWLFDPLKDPVIWILPEVFFLHCFLFFMTVYEIILWSLVGLARWQRPKI
>NC_019042.1|WP_015057651.1|1139392_1140157_-|TIGR01457-family-HAD-type-hydrolase
MSYKGYLIDLDGTIYQGKNRIPAGERFIKRLQERGIPYLLVTNNTTRTPEMVQDMLSKQFNVETGIETIYTATMATVDYMNDMNRGKTAYVIGETGLKSAIAAAGYVEELENPAYVVVGLDSQVTYEMLAIATLAIQKGALFIGTNPDLNIPTERGLMPGAGALNALLEAATRVKPVFIGKPNAIIMNKSLEVLGVKRSEAVMVGDNYLTDIMAGIQNDIATILVTTGFTRPEEVPTLPIQPDHVLSSLDEWRL
>NC_019042.1|WP_015017097.1|1140156_1140909_-|acyl-[acyl-carrier-protein]-thioesterase
MGLSYQEELTLPFELCDVKSDIKLPLLLDYCLTVSGRQSAQLGRSNDYLLEQYGLIWIVTDYEATIHRLPHFQETITIETKALSYNKFFCYRQFYIYDQEGGLLVDILAYFALLNPDTRKVATIPEDLVAPFETDFVKKLHRVPKMPLLEQSIDRDYYVRYFDIDMNGHVNNSKYLDWMYDVLGYEFLKAHEPLRMTLKYVKEVSPGGQITSSYHLDQLTSYHQITSDGQLNAQAMIEWRAIKQTESEID
>NC_019042.1|WP_015057652.1|1140918_1142049_-|oxygen-independent-coproporphyrinogen-III-oxidase
MSKKPTSAYVHIPFCTQICYYCDFSKVFIQNQPVDAYLEALIQEFESYDIHDLKTLYIGGGTPTAITADQLEYLLSHLERNLNLDDLEEFTIEANPGDLTPDKIEVLEHSAVNRISLGVQTFNNKQLKQIGRSHNEEQIYSTIANLKTAGFHNISIDLIYALPGQTLAQVKENVAKALALDIPHLSLYSLILEHHTVFMNKMRRGKLNLPTEDLEAEMFEYIISEMEANGFEHYEISNFTKPGFESRHNLMYWDNVEYFGCGAGASGYLNGIRYQNRVPIQHYLKAVEAGNARLNEEVLRKEEMMEEELFLGLRKKTGVSIQRFQEKFGMSFEERYGTIVRDLQDQGLLVKDDAFVRMTKKGLFLGDSVAERFILD
>NC_019042.1|WP_015057653.1|1142110_1142752_-|hypothetical-protein
MTKQQIEKLADLLPPFAAKLYLDMIPEFQEGYASYVYQTQKEDTQNRRIKQLTKSFARLLDTPSFYVMPLSVQVGKQLLRNEEIACHSLSSVEAIQAFEAAVEDEKEVLQLLRNGSRLALLVLEEANETVHMDLGILTKVEQKVISPAMLTAIEEYLLATTEGSALQLTVTVEQGAARTFYQAHGFHQKADDLVFKPTDGKLICQMVKDLFKA
>NC_019042.1|WP_003056620.1|1142875_1144231_-|phosphoglucosamine-mutase
MGKYFGTDGVRGEANVELTPELAFKLGRFGGYVLSQHETERPKVFVARDTRISGEMLESALIAGLLSVGIEVYKLGVLATPGVSYLVRTEKASAGVMISASHNPALDNGIKFFGNDGFKLADDQELEIEALLDAPKDTLPRPSAEGLGTLVDYPEGLRKYEKFLVTTGTDLSGMTVALDTANGAASVSARDVFLDLNAEIAVIGEKPNGLNINDGVGSTHPEQLQELVKETGADLGLAFDGDSDRLIAVDETGEIVDGDRIMFIIGKYLSEKGLLAHNTIVTTVMSNLGFHKALDKQGINKAITAVGDRYVVEEMRHSGYNLGGEQSGHVIIMDYNTTGDGQLTAIQLTKVMKETGKSLSELAAEVTIYPQKLVNIRVENSMKERAMEVPAIANIIAKMEDEMAGNGRILVRPSGTEPLLRVMAEAPTDAEVDYYVDTIADVVRTEIGCDN

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Crispr_ID: NC_019042_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_019042_3

1581277-1582232

TypeI

I-C

Consensus_repeat	Method
ATTTCAATCCACTCACCCGCGAAGGGTGAGAC	CRISPRCasFinder
ATTTCAATCCACTCACCCGCGAAGGGTGAGAC	CRT
ATTTCAATCCACTCACCCGCGAAGGGTGAGAC	PILER-CR

14 spacers

cas2,cas1,cas4,cas7,cas8c,cas5,cas3

The CRISPR arrays of NC_019042_3

>merge|NC_019042|3|1581277-1582232|CRISPRCasFinder,CRT,PILER-CR
GATGCAATCCACTCACCCGCGAAGGGTGAGACGTGATTCTCACTAAAAATTGGGAAATGACAGAGTTAATTTCAATCCACTCACCCGCGAAGGGTGAGACTGACAGTGATATTCAAGTTGATGCAATTGCGATATTTCAATCCACTCACCCGCGAAGGGTGAGACTAACCAAAATTACTTAAATTTTGATAAGAATAGCATTTCAATCCACTCACCCGCGAAGGGTGAGACAGTAAATGTAACTGGTTGTGTACCTGTTAGGGTAATTTCAATCCACTCACCCGCGAAGGGTGAGACAGTTCCGTCATGGCATCAAATCCCCTAGATTATCATTTCAATCCACTCACCCGCGAAGGGTGAGACCATATAAAGAGTTGGGGTCTGTACTCGTCCAAGTATTTCAATCCACTCACCCGCGAAGGGTGAGACTCATTGGAAGCACGAACCTTGCCTTTATGGATGATTTCAATCCACTCACCCGCGAAGGGTGAGACTGTTCTAACACCTAATAAAAAGTTTGCTATAAAAATTTCAATCCACTCACCCGCGAAGGGTGAGACAGCAAAAAACAATGCCAAAAAGATGAATGAGATTATTTCAATCCACTCACCCGCGAAGGGTGAGACTCTTATAAAGGAGTTTAAAGAATCTAGTGACAAAATTTCAATCCACTCACCCGCGAAGGGTGAGACTAAAAGAAAATATCGACACTTCTTCAGCAATGGATTTCAATCCACTCACCCGCGAAGGGTGAGACTAATCTAAGAGCAATATCTGACCAAATAGTAGAAATTTCAATCCACTCACCCGCGAAGGGTGAGACCGATTTAGACTAGCGGTGTCTGAGTCGCAAGGCTATTTCAATCCACTCACCCGCGAAGGGTGAGACTCTAGTTCTAAGTCCTGTTCTGCCCTCAAAGTATTATTTCAATCCACTCACCCGCGAAGGGTGAGAC

>NC_019042|3|3|1581277-1582232|CRISPRCasFinder
GATGCAATCCACTCACCCGCGAAGGGTGAGAC	GTGATTCTCACTAAAAATTGGGAAATGACAGAGTTA
ATTTCAATCCACTCACCCGCGAAGGGTGAGAC	TGACAGTGATATTCAAGTTGATGCAATTGCGAT
ATTTCAATCCACTCACCCGCGAAGGGTGAGAC	TAACCAAAATTACTTAAATTTTGATAAGAATAGC
ATTTCAATCCACTCACCCGCGAAGGGTGAGAC	AGTAAATGTAACTGGTTGTGTACCTGTTAGGGTA
ATTTCAATCCACTCACCCGCGAAGGGTGAGAC	AGTTCCGTCATGGCATCAAATCCCCTAGATTATC
ATTTCAATCCACTCACCCGCGAAGGGTGAGAC	CATATAAAGAGTTGGGGTCTGTACTCGTCCAAGT
ATTTCAATCCACTCACCCGCGAAGGGTGAGAC	TCATTGGAAGCACGAACCTTGCCTTTATGGATG
ATTTCAATCCACTCACCCGCGAAGGGTGAGAC	TGTTCTAACACCTAATAAAAAGTTTGCTATAAAA
ATTTCAATCCACTCACCCGCGAAGGGTGAGAC	AGCAAAAAACAATGCCAAAAAGATGAATGAGATT
ATTTCAATCCACTCACCCGCGAAGGGTGAGAC	TCTTATAAAGGAGTTTAAAGAATCTAGTGACAAA
ATTTCAATCCACTCACCCGCGAAGGGTGAGAC	TAAAAGAAAATATCGACACTTCTTCAGCAATGG
ATTTCAATCCACTCACCCGCGAAGGGTGAGAC	TAATCTAAGAGCAATATCTGACCAAATAGTAGAA
ATTTCAATCCACTCACCCGCGAAGGGTGAGAC	CGATTTAGACTAGCGGTGTCTGAGTCGCAAGGCT
ATTTCAATCCACTCACCCGCGAAGGGTGAGAC	TCTAGTTCTAAGTCCTGTTCTGCCCTCAAAGTATT
ATTTCAATCCACTCACCCGCGAAGGGTGAGAC

>NC_019042|3|2|1581277-1582232|CRT
GATGCAATCCACTCACCCGCGAAGGGTGAGAC	GTGATTCTCACTAAAAATTGGGAAATGACAGAGTTA
ATTTCAATCCACTCACCCGCGAAGGGTGAGAC	TGACAGTGATATTCAAGTTGATGCAATTGCGAT
ATTTCAATCCACTCACCCGCGAAGGGTGAGAC	TAACCAAAATTACTTAAATTTTGATAAGAATAGC
ATTTCAATCCACTCACCCGCGAAGGGTGAGAC	AGTAAATGTAACTGGTTGTGTACCTGTTAGGGTA
ATTTCAATCCACTCACCCGCGAAGGGTGAGAC	AGTTCCGTCATGGCATCAAATCCCCTAGATTATC
ATTTCAATCCACTCACCCGCGAAGGGTGAGAC	CATATAAAGAGTTGGGGTCTGTACTCGTCCAAGT
ATTTCAATCCACTCACCCGCGAAGGGTGAGAC	TCATTGGAAGCACGAACCTTGCCTTTATGGATG
ATTTCAATCCACTCACCCGCGAAGGGTGAGAC	TGTTCTAACACCTAATAAAAAGTTTGCTATAAAA
ATTTCAATCCACTCACCCGCGAAGGGTGAGAC	AGCAAAAAACAATGCCAAAAAGATGAATGAGATT
ATTTCAATCCACTCACCCGCGAAGGGTGAGAC	TCTTATAAAGGAGTTTAAAGAATCTAGTGACAAA
ATTTCAATCCACTCACCCGCGAAGGGTGAGAC	TAAAAGAAAATATCGACACTTCTTCAGCAATGG
ATTTCAATCCACTCACCCGCGAAGGGTGAGAC	TAATCTAAGAGCAATATCTGACCAAATAGTAGAA
ATTTCAATCCACTCACCCGCGAAGGGTGAGAC	CGATTTAGACTAGCGGTGTCTGAGTCGCAAGGCT
ATTTCAATCCACTCACCCGCGAAGGGTGAGAC	TCTAGTTCTAAGTCCTGTTCTGCCCTCAAAGTATT
ATTTCAATCCACTCACCCGCGAAGGGTGAGAC

>NC_019042|3|3|1581345-1582232|PILER-CR
ATTTCAATCCACTCACCCGCGAAGGGTGAGAC	TGACAGTGATATTCAAGTTGATGCAATTGCGAT
ATTTCAATCCACTCACCCGCGAAGGGTGAGAC	TAACCAAAATTACTTAAATTTTGATAAGAATAGC
ATTTCAATCCACTCACCCGCGAAGGGTGAGAC	AGTAAATGTAACTGGTTGTGTACCTGTTAGGGTA
ATTTCAATCCACTCACCCGCGAAGGGTGAGAC	AGTTCCGTCATGGCATCAAATCCCCTAGATTATC
ATTTCAATCCACTCACCCGCGAAGGGTGAGAC	CATATAAAGAGTTGGGGTCTGTACTCGTCCAAGT
ATTTCAATCCACTCACCCGCGAAGGGTGAGAC	TCATTGGAAGCACGAACCTTGCCTTTATGGATG
ATTTCAATCCACTCACCCGCGAAGGGTGAGAC	TGTTCTAACACCTAATAAAAAGTTTGCTATAAAA
ATTTCAATCCACTCACCCGCGAAGGGTGAGAC	AGCAAAAAACAATGCCAAAAAGATGAATGAGATT
ATTTCAATCCACTCACCCGCGAAGGGTGAGAC	TCTTATAAAGGAGTTTAAAGAATCTAGTGACAAA
ATTTCAATCCACTCACCCGCGAAGGGTGAGAC	TAAAAGAAAATATCGACACTTCTTCAGCAATGG
ATTTCAATCCACTCACCCGCGAAGGGTGAGAC	TAATCTAAGAGCAATATCTGACCAAATAGTAGAA
ATTTCAATCCACTCACCCGCGAAGGGTGAGAC	CGATTTAGACTAGCGGTGTCTGAGTCGCAAGGCT
ATTTCAATCCACTCACCCGCGAAGGGTGAGAC	TCTAGTTCTAAGTCCTGTTCTGCCCTCAAAGTATT
ATTTCAATCCACTCACCCGCGAAGGGTGAGAC

Protein	Signature genes	Signature genes Name	Protein_function
NC_019042.1\|WP_015057904.1\|1572743_1573823_-\|MmcQ/YjbR-family-DNA-binding-protein	unknown	unknown	gnl\|CDD\|225197
NC_019042.1\|WP_015057912.1\|1587130_1587859_-\|type-I-C-CRISPR-associated-protein-Cas5	cas5	cd09752_cas5_CAS-I-C	gnl\|CDD\|273847
NC_019042.1\|WP_015057915.1\|1590594_1591728_-\|ISAs1-like-element-IS1548-family-transposase	unknown	unknown	gnl\|CDD\|227720
NC_019042.1\|WP_015057909.1\|1583706_1584381_-\|CRISPR-associated-protein-Cas4	cas4	COG1468_cas4_CAS-I-A:CAS-I-B:CAS-I-C:CAS-I-D:CAS-II-B	gnl\|CDD\|224385
NC_019042.1\|WP_003055983.1\|1576453_1577560_-\|peptide-methionine-(R)-S-oxide-reductase-MsrB	unknown	unknown	gnl\|CDD\|184456
NC_019042.1\|WP_015057903.1\|1572013_1572730_-\|B3/4-domain-containing-protein	unknown	unknown	gnl\|CDD\|225917
NC_019042.1\|WP_003044506.1\|1582380_1582674_-\|CRISPR-associated-endonuclease-Cas2	cas2	COG1343_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|224262
NC_019042.1\|WP_015057910.1\|1584382_1585231_-\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	cas7	COG3649_cas7_CAS-I-C	gnl\|CDD\|226175
NC_019042.1\|WP_015057907.1\|1580192_1581152_-\|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|223745
NC_019042.1\|WP_003055974.1\|1578238_1578949_-\|thiol-disulfide-oxidoreductase-associated-membrane-protein-CcdA2	unknown	unknown	gnl\|CDD\|223856
NC_019042.1\|WP_015057905.1\|1573895_1575629_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|225519
NC_019042.1\|WP_003062442.1\|1594660_1595224_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|379082
NC_019042.1\|WP_015057913.1\|1587991_1590418_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NC_019042.1\|WP_003057398.1\|1571362_1571836_+\|arginine-repressor	unknown	unknown	gnl\|CDD\|224355
NC_019042.1\|WP_014612471.1\|1575625_1576366_-\|response-regulator	unknown	unknown	gnl\|CDD\|227095
NC_019042.1\|WP_003055993.1\|1577602_1578226_-\|TlpA-family-protein-disulfide-reductase	unknown	unknown	gnl\|CDD\|239264
NC_019042.1\|WP_015057908.1\|1582684_1583710_-\|type-I-C-CRISPR-associated-endonuclease-Cas1	cas1	cd09721_cas1_CAS-I-C	gnl\|CDD\|188360
NC_019042.1\|WP_015057916.1\|1592010_1594659_-\|valine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235582
NC_019042.1\|WP_015057911.1\|1585235_1587131_-\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	cas8c	cd09642_cas8c_CAS-I-C	gnl\|CDD\|273839
NC_019042.1\|WP_003055981.1\|1579168_1580101_-\|magnesium-transporter-CorA-family-protein	unknown	unknown	gnl\|CDD\|213361

Protein	Function_ID	Function_description	E-value
NC_019042.1\|WP_015057904.1\|1572743_1573823_-\|MmcQ/YjbR-family-DNA-binding-protein	gnl\|CDD\|225197	COG2315, MmcQ, Uncharacterized protein conserved in bacteria [Function unknown].	1.945e-31
NC_019042.1\|WP_015057912.1\|1587130_1587859_-\|type-I-C-CRISPR-associated-protein-Cas5	gnl\|CDD\|273847	TIGR01876, cas_Cas5d, CRISPR-associated protein Cas5, subtype I-C/DVULG. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This small Cas family is represented by CT1134 of Chlorobium tepidum. This family belongs to a set of several Cas protein families, one each for a number of different CRISPR/Cas subtypes, that share a region of N-terminal sequence similarity modeled by TIGR02593. This family represents the Dvulg subtype of CRISPR/Cas locus.	3.89834e-116
NC_019042.1\|WP_015057915.1\|1590594_1591728_-\|ISAs1-like-element-IS1548-family-transposase	gnl\|CDD\|227720	COG5433, COG5433, Transposase [DNA replication, recombination, and repair].	5.24693e-30
NC_019042.1\|WP_015057909.1\|1583706_1584381_-\|CRISPR-associated-protein-Cas4	gnl\|CDD\|224385	COG1468, COG1468, CRISPR-associated protein Cas4 (RecB family exonuclease) [Defense mechanisms].	9.21685e-41
NC_019042.1\|WP_003055983.1\|1576453_1577560_-\|peptide-methionine-(R)-S-oxide-reductase-MsrB	gnl\|CDD\|184456	PRK14018, PRK14018, bifunctional peptide-methionine (S)-S-oxide reductase MsrA/peptide-methionine (R)-S-oxide reductase MsrB.	1.44907e-162
NC_019042.1\|WP_015057903.1\|1572013_1572730_-\|B3/4-domain-containing-protein	gnl\|CDD\|225917	COG3382, COG3382, Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta [General function prediction only].	6.90296e-105
NC_019042.1\|WP_003044506.1\|1582380_1582674_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|224262	COG1343, COG1343, CRISPR-associated protein Cas2 [Defense mechanisms].	2.32373e-34
NC_019042.1\|WP_015057910.1\|1584382_1585231_-\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	gnl\|CDD\|226175	COG3649, COG3649, CRISPR system related protein [Defense mechanisms].	2.68212e-160
NC_019042.1\|WP_015057907.1\|1580192_1581152_-\|Gfo/Idh/MocA-family-oxidoreductase	gnl\|CDD\|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	6.8855e-59
NC_019042.1\|WP_003055974.1\|1578238_1578949_-\|thiol-disulfide-oxidoreductase-associated-membrane-protein-CcdA2	gnl\|CDD\|223856	COG0785, CcdA, Cytochrome c biogenesis protein [Posttranslational modification, protein turnover, chaperones].	2.75339e-42
NC_019042.1\|WP_015057905.1\|1573895_1575629_-\|sensor-histidine-kinase	gnl\|CDD\|225519	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms].	4.53442e-64
NC_019042.1\|WP_003062442.1\|1594660_1595224_-\|AAA-family-ATPase	gnl\|CDD\|379082	pfam13238, AAA_18, AAA domain.	0.000920316
NC_019042.1\|WP_015057913.1\|1587991_1590418_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	1.1681e-156
NC_019042.1\|WP_003057398.1\|1571362_1571836_+\|arginine-repressor	gnl\|CDD\|224355	COG1438, ArgR, Arginine repressor [Transcription].	3.49174e-65
NC_019042.1\|WP_014612471.1\|1575625_1576366_-\|response-regulator	gnl\|CDD\|227095	COG4753, COG4753, Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain [Signal transduction mechanisms].	2.44164e-83
NC_019042.1\|WP_003055993.1\|1577602_1578226_-\|TlpA-family-protein-disulfide-reductase	gnl\|CDD\|239264	cd02966, TlpA_like_family, TlpA-like family; composed of TlpA, ResA, DsbE and similar proteins. TlpA, ResA and DsbE are bacterial protein disulfide reductases with important roles in cytochrome maturation. They are membrane-anchored proteins with a soluble TRX domain containing a CXXC motif located in the periplasm. The TRX domains of this family contain an insert, approximately 25 residues in length, which correspond to an extra alpha helix and a beta strand when compared with TRX. TlpA catalyzes an essential reaction in the biogenesis of cytochrome aa3, while ResA and DsbE are essential proteins in cytochrome c maturation. Also included in this family are proteins containing a TlpA-like TRX domain with domain architectures similar to E. coli DipZ protein, and the N-terminal TRX domain of PilB protein from Neisseria which acts as a disulfide reductase that can recylce methionine sulfoxide reductases.	3.58838e-35
NC_019042.1\|WP_015057908.1\|1582684_1583710_-\|type-I-C-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|188360	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the DVULG subtype of CRISPR/Cas system.	0
NC_019042.1\|WP_015057916.1\|1592010_1594659_-\|valine--tRNA-ligase	gnl\|CDD\|235582	PRK05729, valS, valyl-tRNA synthetase; Reviewed.	0
NC_019042.1\|WP_015057911.1\|1585235_1587131_-\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	gnl\|CDD\|273839	TIGR01863, CRISPR-associated_protein_CT1133_family, CRISPR-associated protein Cas8c/Csd1, subtype I-C/DVULG. CRISPR loci appear to be mobile elements with a wide host range. This model represents a protein that tends to be found near CRISPR repeats of the DVULG subtype of CRISPR/Cas locus. We designate this family Csd1 (CRISPR/Cas Subtype DVULG protein 1). The species range for this subtype, so far, is exclusively bacterial and mesophilic, although CRISPR loci in general are particularly common among archaea and thermophilic bacteria. In a few species (Xanthomonas axonopodis pv. citri str. 306 and Streptococcus mutans UA159), homology to this protein family is split across two tandem genes; the trusted cutoff to this family is set low enough to capture at least the longer of the two.	0
NC_019042.1\|WP_003055981.1\|1579168_1580101_-\|magnesium-transporter-CorA-family-protein	gnl\|CDD\|213361	cd12827, EcCorA_ZntB-like_u2, uncharacterized bacterial subfamily of the Escherichia coli CorA-Salmonella typhimurium ZntB family. A uncharacterized subfamily of the Escherichia coli CorA-Salmonella typhimurium ZntB (EcCorA-ZntB_like) family of the MIT superfamily of essential membrane proteins involved in transporting divalent cations (uptake or efflux) across membranes.The EcCorA-ZntB-like family includes the Mg2+ transporters Escherichia coli and Salmonella typhimurium CorAs, which can also transport Co2+, and Ni2+. Structures of the intracellular domain of EcCorA-ZntB-like family members, Vibrio parahaemolyticus and Salmonella typhimurium ZntB, form funnel-shaped homopentamers, the tip of the funnel is formed from two C-terminal transmembrane (TM) helices from each monomer, and the large opening of the funnel from the N-terminal cytoplasmic domains. The GMN signature motif of the MIT superfamily occurs just after TM1, mutation within this motif is known to abolish Mg2+ transport through Salmonella typhimurium CorA. Natural variants such as GVN and GIN, such as occur in some ZntB family proteins, may be associated with the transport of different divalent cations, such as zinc and cadmium. The functional diversity of MIT transporters may also be due to minor structural differences regulating gating, substrate selection, and transport.	2.18664e-78

>NC_019042.1|WP_015057907.1|1580192_1581152_-|Gfo/Idh/MocA-family-oxidoreductase
MAKVRYGIVSTAQVAPRFIEGVRLAGNGEVVAVSSRSLDKAKAFAAAHQLPKAYGSLDDMLLDASIDAIYVASINQDHFPAAKKALLAGKHVLVEKPFTLTSAQAEELFALAQERGLFLMEAQKAVFIPMTQRLKGLIAAGELGDIVSVSSTTAYPNIDHVTWFRDLEKGGGTVHFMAPYALSYLPYLFDADIVSASGVAHFPKGQSDSQSKLVLTLSNGVLVDIFLTTHLSLPHELVIYGTKGRLEIPHFWKTTHATLVRPGGSRSVIEATMSSDFEAEAHHVSQMILEGQLTSPVMTKSLTLSGVGLIEKLYRSWGK
>NC_019042.1|WP_003055981.1|1579168_1580101_-|magnesium-transporter-CorA-family-protein
MPTLPKASSAITLINLDQLTEHDQEALVSEGLIDAEVFDYAKDKNETSFMEENKEKLTIVFQILDRQEEAYHPNHIPLVIPITLFLNDQSLYILGYDHSLALIEEVFPGLDESRSPRHLVFQLLTAFTKQYVPLMDEIAQQRDKLIEALRQKANKTNLESLANLQSGTVYILMGSKQNEQMLAELKDMPGQQDLEEDEAEQLRDAIIEARQLSNMCDLNTRVLKEISSSYNNVLSNNLNNNVTSLTIFSIGISIIAMVTSFYGMNVKLPFAKIDSVWFWIVLTTSLVALLIMVVMYWYVHKRNRNASKRI
>NC_019042.1|WP_003055974.1|1578238_1578949_-|thiol-disulfide-oxidoreductase-associated-membrane-protein-CcdA2
MTLSIVLIASVFAAGLLSFFSPCIFPVLPVYLGILLDADDSRTMTIFGKKLYWYGIVKTLAFIFGLSTIFVILGYGAGFLGNILYAVWFRYFLGALVIILGIHQMGFITIKSLQFQKSLTFHNNKNRNGLFNAFILGLTFSFGWTPCVGPVLSSVLALVASGGNGAWQGGVLMIIYTLGLGIPFLLISFASGIVLKQFNKLKPHILLLKKVGGVLIIVMGILLMTGTLNNLAQLFG
>NC_019042.1|WP_003055993.1|1577602_1578226_-|TlpA-family-protein-disulfide-reductase
MKKGLLVTTGLACLGLLTACSTQDNMAKKEITQDKMSMAAKKKDKMSTSKDKSMMADKSSDKKMTNDGPMAPDFELKGIDGKTYRLSEFKGKKVYLKFWASWCSICLSTLADTEDLAKMSDKDYVVLTVVSPGHQGEKSEADFKKWFQGTDYKGLPVLLDPDGKLLEAYGVRSYPTEVFIGSDGVLAKKHIGYAKKSDIKKTLKGIH
>NC_019042.1|WP_003055983.1|1576453_1577560_-|peptide-methionine-(R)-S-oxide-reductase-MsrB
MEHKWKLWLFIVGVVLLIGGASVLIQKGQAKAFSQGKPQLPAKKVKSTKVDPNVPVDQKVIYLAGGCFWGVEEYFSQVNGVLDAVSGYANGRGDTTNYQLIHQTGHAETVEVTYDANRISLKELLLHFFRIIDPTSLNKQGNDRGSQYRTGIYYTDKADLAIIDEVFKEKAKDYKKKIVVEKAPLKHFIKAEDYHQDYLKKNPNGYCHIDINQATYPVIDESKYPKPSATEIKAKLSADEYRVTQKNETEKAFSNRYWDSFDAGIYVDVVTGEPLFSSKDKFESGCGWPSFSRPISPDVIRYKEDKSFNMTRTEVRSRSGNSHLGHVFTDGPKDQGGLRYCINSLSITFIPKADMEAKGYGYLLSSVE
>NC_019042.1|WP_014612471.1|1575625_1576366_-|response-regulator
MYSLLIVEDEYLVRQGIRSLVDFSQFKIDRVNEAENGQLAWDLFQKEPYDIVLTDINMPKLNGIQLAELIKQESPQTHLVFLTGYDDFNYALSALKLGADDYLLKPFSKADVEDMLGKLQQKLDLSKKTETIQELVEQPQKEVSAIAMAIHERLADSDLTLKSLAQQLGFSPNYLSVLIKKELGMPFQDYLVQERLKKAKLLLLTSNLKIYEIAEQVGFEDMNYFSQRFKQLVGVTPSQYKKGGQA
>NC_019042.1|WP_015057905.1|1573895_1575629_-|sensor-histidine-kinase
MKRYPLLVQLISYVFVIVIALITTLGLLYYQTSSRNIRQLIERDTRQSIRQSSQFIDAYIKPLKETTSVLAKNTEIQAFASQIHQENDKQVLQLMKMVLATNSDLQAAVLVTKDGRTVSTNSQLTMKTSSDMMAEPWYKAAIDCQAMPVLTPARQLSLSSKKEWVVSVTQEVVDAAGHNLGVLRLDIAYPTIKASLDQLQLGRQGFAFIVNDKHEFVYHPKKSVYSSSKEMAAMKPYLAIQNGYTKDKTSFVYQKLIPNSQWTLVGVASLDQLHRVQRQILWSFLGTGLLACLICGFATVLALRRWIRPIQQLQQVILAIQKGDRQLRAQETGSPELTDLAHQFNALLDQIDSLMVAVADKEKAIGQYRLQALASQINPHFLYNTLDTIIWMAEFNDSKRVVEVTKSLAKYFRLALNQGNEYIRLADELDHVSQYLFIQKQRYGDKLSYDVQGLDVYADFVIPKLILQPLVENAIYHGIKEVDRKGMIKITVSDTAQHLMLTVWDNGKGIEDSSLTNSQSLLARGGVGLKNVDQRLKLHYGEGYHMTIHSQSDHFTEIQLSLPKMHELMADDTQENE
>NC_019042.1|WP_015057904.1|1572743_1573823_-|MmcQ/YjbR-family-DNA-binding-protein
MSLATDYFSRQTPIVEKLVAYGFEKRDNGYFYNERFMEGEFEAQLRIDEAGNIWDRVIDCDLEEDYLPLQQAAWQGTYSGQVRAAYLELLERLSVACFEATPFQSMQANRLAKHITKEWSDPMDYPFEKHPDLATYRVGGKWYAMIFSLLADKLDQIPERLVGQTCEVMTVKVNPKDLPQLLQQEGIYPAYHMSKNNWVSVVLDDKVTDDQLWGLATQSRQLVNPNGLSNPNSSDYWVIPANLKYYDIDAEFAANDVILWTQKAGIAVGDYVLIYITAPVKSIRYACQVLETDIPNEGYRKNPNIDKLMRLRKCQQYKDGLLSFDLMKEHGVAAVRGPRRLSPQLIAFLKEKEYFKENN
>NC_019042.1|WP_015057903.1|1572013_1572730_-|B3/4-domain-containing-protein
MVEFVADQSFWELFPDAKLGVVLLKDVQNQAESPEDVKQLLADSHELAKAYLTADNFSDNQVVQVYRKAYQHFKTKKGARSSIEALLKRVSNGQSIPSINPLVDIYNAASLRFGLPVGAEDSDSFIGDLRLTITDGGDDFYLIGDADNNPTLPNELCYKDDIGAVCRCLNWRDGERTMVTEHTKNAFLIIEALDQEDQNRLQEALKFIEGSAKMYLHAITSLHMLDKDNPHVPLFTEN
>NC_019042.1|WP_003057398.1|1571362_1571836_+|arginine-repressor
MNKKETRHQLIRSLISETTIHTQQELQERLRKNGITITQATLSRDMKELNLVKVTSGNDTHYEALAISQTRWEHRLRFYMEDALVMLKVVQHQIILKTLPGLAQSFGSILDAMQIPEIVATVCGDDTCLIVCEDNEQAKACYETLSHYTPPFFFSNK
>NC_019042.1|WP_003044506.1|1582380_1582674_-|CRISPR-associated-endonuclease-Cas2
MMVLVTYDVNTETSAGRKRLRHVAKLCVDYGQRVQNSVFECSVTPAEFVDIKHRLTQIIDGETDSIRFYLLGKNWQRRVETLGRSDSYDPDKGVLLL
>NC_019042.1|WP_015057908.1|1582684_1583710_-|type-I-C-CRISPR-associated-endonuclease-Cas1
MKKLLNTLYLTQEDFYVTKEGDNIVIKQEGKVLKRFPFRIIDGIICFSYLGVSPALVKLCTENQINLSFHTPQGRFCGRYIGSTNGNVLLRREHYRLSDREESLEYAKRFILAKISNSRKYLLRFKRDHRQQIDTTLFEAVNDELIWALGMVQAADNKDSLRGIEGQAANQYFRIFNDLVLTNKKTFYFQGRSKRPPLDCVNALLSFGYSLLTFECQSALEAVGLDSYVGFFHTDRPGRASLALDLVEEFRSYIVDRFVFSLINKGQLQKKHFEFKENGSILLTENGRAIFIDLWQKRKHTEVEHPFTKEKVKLMLLPYVQAQLLAKAIRGDLESYPPFMV
>NC_019042.1|WP_015057909.1|1583706_1584381_-|CRISPR-associated-protein-Cas4
MVYAEDDYLMLSGIQHFQFCKRQWALIHIEQQWLDNEATAHGQILHTKADNPYIKEKRKDLLVSRAMPISSAELGLSGIMDVVEFYKDDQGVSLRGKRGKWLPKVVEYKRGKPKKDTRDIVQLVAQTMCLEETLGCHINEGCLYYHSVNQRVTVEMTSALRQEVRELTTEMHKVYQSQMLPKAAYFKNCQLCSLVDICKPRLSKKTRSVSRYINEAMTSEEMNL
>NC_019042.1|WP_015057910.1|1584382_1585231_-|type-I-C-CRISPR-associated-protein-Cas7/Csd2
MLEHKIDFMVTLEVKEANANGDPLNGNMPRTDAKGYGVMSDVSIKRKIRNRLQDMGKSIFVQANERIEDDFRSLERRFSQHFTAKTPDKEIEEKANALWFDVRAFGQVFTYLKKSIGVRGPVSISMAKSLEPIVISSLQITRSTNGMEAKNNSGRSSDTMGTKHFVDYGVYVLKGSINAYFAEKTGFSQEDAEAIKEVLVSLFENDASSARPEGSMRVCEVFWFTHSSKLGNVSSARVFDLLEYHQSIEEKSTYDAYQIHLNQEKLAKYEAKGLTVEILEGL
>NC_019042.1|WP_015057911.1|1585235_1587131_-|type-I-C-CRISPR-associated-protein-Cas8c/Csd1
MDFFTSLLKTYEKAELADLVDHQKRSNEPVLLPIYHTSLKSNGKNIISVKLDKDGQFHKAEFMADKQMIIFPVTADSVARSGSHPAPHPLVDKFAYYSAEMGQSQYDSFHKQLNNWIDYCEEGDVKRFLTIVQQFILKPEFLTLILDSLIGPDYQHNQLKVTFCDATGKEKLIDLSACFLEFSIDQFQGFKNESVSTFKALHQSYISFVEANRENLGICNISGREEQLTDKHRGLMGNAKIISVSNKREAYKGRFREREDVFSVGYETSEKIHLMIKYLLENKNTSTWLGSSQYLINWFSDDLTNDSRLDIVSPIFDDGLEEDDDDDTPPVIALATEDNKRIGKSFIKGQKLFANDATYYVAILNKTSNGRIALKYFRQLQASQLLTNLDKWQETYSWESRSKFGKSRLRTPTFHDILNVSYGVDRDRFLELDNDNFKSDQIQKLVASLIDGKPMPQSIVKKLGNNVKERHRYRKHWYQVEQVCLAILHKQNGEEFSPMLDHTNQNRSYLFGRLLAIFELIETLRYGLDGNNNDRITNAERYWTAYTGQPTKLMMLLENKIKPYEEPLKLNRRGSWMKLEKEKEEILELLNPLLKTETMEKPLDYRFIFGYYAEKNYYYTKQNTEVTESEE
>NC_019042.1|WP_015057912.1|1587130_1587859_-|type-I-C-CRISPR-associated-protein-Cas5
MYRSRDFYVRVSGQRALFTNPATKGGSERSSYSVPTRQALNGIVDAIYYKPTFTNIVTEVKVINQIQTELQGVRALLHDYSADLSYVSYLSDVVYLIKFHFVWNEDRKDLNSDRLPAKHEAIMERSIRKGGRRDVFLGTRECLGLVDDISQEEYEAAVSYYNGVNIDLGIMFHSFAYPKDKKTPLKSYFTKTVMKNGVITFKAQSECDIVNTLSSYAFKAPEEIKSVNDECMEYDAMEKGEN
>NC_019042.1|WP_015057913.1|1587991_1590418_-|CRISPR-associated-helicase/endonuclease-Cas3
MMTKQTLAHYQKKTEQESEKKQSLDEHLWHVACSSRQEASIIGQGDVLFLIGLYHDLGKADRAFQDKLLNNPNRHVDHSYAGAKYLCSIIGPHLKNRGVDKNERMTFNEMVGYVISAHHGMYDLCYSSYDAEYYSFNKFKNRINRDLDGYHYHEDIKGYALKLEEKLCDYGYKDLRELIDKAFDNYQQAMSSLNWQDKSEWDYYQSCMVRLYLSLLKNADILDTVNAYGLKISPMDKTERSFLKHSYLAAIEQKYASFGRPNNQLNIIRTEIAERVKERGKRDSKGIYRLDLPTGAGKTNLSMRYAFHQLVHQDKSRFFYITPFLSVLEQNASEIRKVTGDLGVLEHHSNMVKQANEDDDDKDSLLSAYLIDSWDSQVVLTSMVQFFQTLFKTKSANLRRFSSLINSVVILDEVQSLPIEVTTLFNLTMNFLNKVMDTTIVLCTATQPAYDSSEIDHRICYGGNLGELAEIVELTIEEKQIFSRTELRKFDDSDQKVHLTDVINLILGEENSVLAIFNTKKTVHNCYTMLKDITDRPVYQLSTNMCAQHRLDLIAKIKTELQNNTPIICISTQLIEAGVDVDFHRVIRSYSGIDSIVQAAGRCNREGKRDKGQVTLVNLTNEEENISRLTEIKAKKEATESILHKIGSPIDISTLNRDFFEYYYANNQGLMDYPLEDNLSIYDYLSLNIYQTANKKFKGKLKQAFKTAGAKMNLINNDMIGILVPYGEAEKKLAYLEELGMSHFLSAEDYQTIKSLLKELQPFTVNVRENDPLFETTKSYLNGQILVLTSEYYDTERGVKYDSASFYF
>NC_019042.1|WP_015057915.1|1590594_1591728_-|ISAs1-like-element-IS1548-family-transposase
MIDFIISIDDCAVELDSRQSWKIRYPLSTILFLVFVCQLAGIETWKEMEDFIEMNEPLFATYVDLSEGCPSHDTLERVISLVNSDRLKELKVQFEQSLTSLGAVHQLISVDGKTIRGNRGNNQKPVHIVTAYDGGHHLSLGQVAVEEKSNEIVAIPQLLRTIDIRKSIVTIDAMGTQTAIVDTIIKGKADYCLAVKGNQETLYDDIALYFSDVNLLEELQENAQYYQTVEKSRGQIEVREYWVSSEIKWLCQNHPKWHKLRGIGMTRNTIDKDGQLSQENRYFIFSFKPDVLTFANCVRGHWQIESMHWLLDVVYHEDHHQTLDKRAAFNLNLIRKMCLYFLKVMVFPKKDLSYRRKQRYISVHLEDYLVQLFGERG
>NC_019042.1|WP_015057916.1|1592010_1594659_-|valine--tRNA-ligase
MTELSPKYNPAEVEAGRYQKWLDADVFKPSGDQKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLREQGISRYDLGRDKFLDKVWEWKDEYATTIKEQWGKMGLSVDYSRERFTLDEGLSKAVRKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALQVATTRPETMFGDVAVAVNPEDPRYKDLIGKHVILPIVNKLIPIVGDEHADPEFGTGVVKITPAHDPNDFEVGQRHNLPQVNVMNDDGTMNELAGDFAGMDRFEARQATVAKLEELGALVNIEKRVHSVGHSERSGAVVEPRLSTQWFVKMDELAKQAMDNQETDDRVDFYPPRFNDTFLQWMENVHDWVISRQLWWGHQIPAWYNAEGEIYVGEEAPEGDDWTQDEDVLDTWFSSALWPFSTMGWPDTDVEDFKRYFPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIEKYGADSLRWFLSNGSAPGQDVRFSYEKMDASWNFINKIWNISRYILMNNEGLTLEEAESNVAKVAASEAGNVTDQWILHNLNETIAKVTENFDKFEFGVAGHILYNFIWEEFANWYVELTKEVLYSDNEAEKVIARSVLLYTLDKILRLLHPIMPFVTEEIYAQYAQGSIVTVDYPVVRPAFENEAAHKGVESLKDLIRAVRNARAEVNVAPSKPITILVKTADSELEDFFNSNINYIKRFTNPEKLEISSAIAAPELAMTSIITGAEIYLPLADLLNVEEELARLDKELAKWQKELDMVGKKLGNERFVANAKPEVVQKEKDKQADYQAKYDATQERIVEMQKLVG
>NC_019042.1|WP_003062442.1|1594660_1595224_-|AAA-family-ATPase
MNLIIIGAQASGKMTIGQEIAEQTGMTLFHNHDSIDFVLRFMPWSQESTALIERLRFNFFETFAKNGQEMIFTIVIDFNDPNDVAFLDKIQAVFQSYDQEVLFVELETDVNERLKRNRTENRLKHKPFKRNIEWSEQDIQSTMAYAVFNPEEPPKTLTYYQKINNTHLTAAETAQLIIQKMTHIKEN

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NC_019042_2	2.3\|1131089\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131089-1131118	30	MK448679	Streptococcus phage Javan137, complete genome	35063-35092	0	1.0
NC_019042_2	2.4\|1131155\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131155-1131184	30	MK448681	Streptococcus phage Javan141, complete genome	32039-32068	0	1.0
NC_019042_2	2.4\|1131155\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131155-1131184	30	MK448672	Streptococcus phage Javan117, complete genome	32556-32585	0	1.0
NC_019042_2	2.4\|1131155\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131155-1131184	30	MK448849	Streptococcus phage Javan128, complete genome	31976-32005	0	1.0
NC_019042_2	2.4\|1131155\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131155-1131184	30	MK448683	Streptococcus phage Javan149, complete genome	34575-34604	0	1.0
NC_019042_2	2.5\|1131221\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131221-1131250	30	NZ_CP044104	Streptococcus dysgalactiae strain FDAARGOS_654 plasmid unnamed2, complete sequence	1763-1792	0	1.0
NC_019042_2	2.5\|1131221\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131221-1131250	30	NZ_KJ951051	Streptococcus dysgalactiae subsp. equisimilis strain G279 plasmid pG279, complete sequence	1618-1647	0	1.0
NC_019042_2	2.6\|1131287\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131287-1131316	30	MK449012	Streptococcus phage Javan94, complete genome	9492-9521	0	1.0
NC_019042_2	2.6\|1131287\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131287-1131316	30	MK448775	Streptococcus phage Javan489, complete genome	11936-11965	0	1.0
NC_019042_2	2.6\|1131287\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131287-1131316	30	MK448794	Streptococcus phage Javan525, complete genome	10131-10160	0	1.0
NC_019042_2	2.6\|1131287\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131287-1131316	30	MK448944	Streptococcus phage Javan452, complete genome	12311-12340	0	1.0
NC_019042_2	2.6\|1131287\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131287-1131316	30	MK448672	Streptococcus phage Javan117, complete genome	7892-7921	0	1.0
NC_019042_2	2.6\|1131287\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131287-1131316	30	MK448849	Streptococcus phage Javan128, complete genome	7796-7825	0	1.0
NC_019042_2	2.6\|1131287\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131287-1131316	30	MK448958	Streptococcus phage Javan486, complete genome	10272-10301	0	1.0
NC_019042_2	2.6\|1131287\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131287-1131316	30	MK448850	Streptococcus phage Javan132, complete genome	12621-12650	0	1.0
NC_019042_2	2.6\|1131287\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131287-1131316	30	MK448765	Streptococcus phage Javan459, complete genome	10131-10160	0	1.0
NC_019042_2	2.6\|1131287\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131287-1131316	30	MK448673	Streptococcus phage Javan119, complete genome	11397-11426	0	1.0
NC_019042_2	2.8\|1131419\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131419-1131448	30	MK448860	Streptococcus phage Javan172, complete genome	36819-36848	0	1.0
NC_019042_2	2.9\|1131485\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131485-1131514	30	MK448848	Streptococcus phage Javan126, complete genome	8971-9000	0	1.0
NC_019042_2	2.9\|1131485\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131485-1131514	30	MK448857	Streptococcus phage Javan164, complete genome	8971-9000	0	1.0
NC_019042_2	2.9\|1131485\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131485-1131514	30	MK448677	Streptococcus phage Javan133, complete genome	9963-9992	0	1.0
NC_019042_2	2.10\|1131551\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131551-1131580	30	MK448858	Streptococcus phage Javan166, complete genome	18371-18400	0	1.0
NC_019042_2	2.10\|1131551\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131551-1131580	30	MK448854	Streptococcus phage Javan146, complete genome	17899-17928	0	1.0
NC_019042_2	2.11\|1131617\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131617-1131646	30	MK448860	Streptococcus phage Javan172, complete genome	34157-34186	0	1.0
NC_019042_2	2.11\|1131617\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131617-1131646	30	MK448784	Streptococcus phage Javan505, complete genome	36289-36318	0	1.0
NC_019042_2	2.11\|1131617\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131617-1131646	30	MK448947	Streptococcus phage Javan458, complete genome	36289-36318	0	1.0
NC_019042_2	2.11\|1131617\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131617-1131646	30	MK448965	Streptococcus phage Javan506, complete genome	36658-36687	0	1.0
NC_019042_2	2.11\|1131617\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131617-1131646	30	MK448859	Streptococcus phage Javan170, complete genome	37598-37627	0	1.0
NC_019042_2	2.11\|1131617\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131617-1131646	30	MK448679	Streptococcus phage Javan137, complete genome	33249-33278	0	1.0
NC_019042_2	2.11\|1131617\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131617-1131646	30	MK448689	Streptococcus phage Javan163, complete genome	36289-36318	0	1.0
NC_019042_2	2.11\|1131617\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131617-1131646	30	MK448974	Streptococcus phage Javan524, complete genome	36289-36318	0	1.0
NC_019042_2	2.11\|1131617\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131617-1131646	30	MK448688	Streptococcus phage Javan161, complete genome	37556-37585	0	1.0
NC_019042_2	2.11\|1131617\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131617-1131646	30	MK448789	Streptococcus phage Javan513, complete genome	36288-36317	0	1.0
NC_019042_2	2.12\|1131683\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131683-1131712	30	MK448672	Streptococcus phage Javan117, complete genome	19775-19804	0	1.0
NC_019042_2	2.12\|1131683\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131683-1131712	30	MK448849	Streptococcus phage Javan128, complete genome	19196-19225	0	1.0
NC_019042_2	2.13\|1131749\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131749-1131778	30	MK448672	Streptococcus phage Javan117, complete genome	19775-19804	0	1.0
NC_019042_2	2.13\|1131749\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131749-1131778	30	MK448849	Streptococcus phage Javan128, complete genome	19196-19225	0	1.0
NC_019042_2	2.14\|1131815\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131815-1131844	30	MK448681	Streptococcus phage Javan141, complete genome	5178-5207	0	1.0
NC_019042_2	2.14\|1131815\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131815-1131844	30	MK448944	Streptococcus phage Javan452, complete genome	9246-9275	0	1.0
NC_019042_2	2.14\|1131815\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131815-1131844	30	MK448690	Streptococcus phage Javan169, complete genome	8317-8346	0	1.0
NC_019042_2	2.14\|1131815\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131815-1131844	30	MK448849	Streptococcus phage Javan128, complete genome	4921-4950	0	1.0
NC_019042_2	2.14\|1131815\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131815-1131844	30	MK448854	Streptococcus phage Javan146, complete genome	9843-9872	0	1.0
NC_019042_2	2.14\|1131815\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131815-1131844	30	MK448845	Streptococcus phage Javan118, complete genome	6721-6750	0	1.0
NC_019042_2	2.16\|1131947\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131947-1131976	30	MK448848	Streptococcus phage Javan126, complete genome	26408-26437	0	1.0
NC_019042_2	2.16\|1131947\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131947-1131976	30	MK448857	Streptococcus phage Javan164, complete genome	26408-26437	0	1.0
NC_019042_2	2.16\|1131947\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131947-1131976	30	MK448677	Streptococcus phage Javan133, complete genome	27399-27428	0	1.0
NC_019042_2	2.16\|1131947\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131947-1131976	30	MK448673	Streptococcus phage Javan119, complete genome	34356-34385	0	1.0
NC_019042_3	3.3\|1581442\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581442-1581475	34	MK448858	Streptococcus phage Javan166, complete genome	15864-15897	0	1.0
NC_019042_3	3.3\|1581442\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581442-1581475	34	MK448848	Streptococcus phage Javan126, complete genome	9954-9987	0	1.0
NC_019042_3	3.3\|1581442\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581442-1581475	34	MK448857	Streptococcus phage Javan164, complete genome	9954-9987	0	1.0
NC_019042_3	3.3\|1581442\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581442-1581475	34	MK448677	Streptococcus phage Javan133, complete genome	10946-10979	0	1.0
NC_019042_3	3.3\|1581442\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581442-1581475	34	MK448859	Streptococcus phage Javan170, complete genome	15361-15394	0	1.0
NC_019042_3	3.3\|1581442\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581442-1581475	34	MK448690	Streptococcus phage Javan169, complete genome	14620-14653	0	1.0
NC_019042_3	3.3\|1581442\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581442-1581475	34	MK448682	Streptococcus phage Javan143, complete genome	11534-11567	0	1.0
NC_019042_3	3.3\|1581442\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581442-1581475	34	MK448688	Streptococcus phage Javan161, complete genome	15315-15348	0	1.0
NC_019042_3	3.4\|1581508\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581508-1581541	34	MK448681	Streptococcus phage Javan141, complete genome	31112-31145	0	1.0
NC_019042_3	3.4\|1581508\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581508-1581541	34	MK448672	Streptococcus phage Javan117, complete genome	31629-31662	0	1.0
NC_019042_3	3.4\|1581508\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581508-1581541	34	MK448849	Streptococcus phage Javan128, complete genome	31049-31082	0	1.0
NC_019042_3	3.4\|1581508\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581508-1581541	34	MK448856	Streptococcus phage Javan158, complete genome	9681-9714	0	1.0
NC_019042_3	3.7\|1581706\|33\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581706-1581738	33	MK448672	Streptococcus phage Javan117, complete genome	13382-13414	0	1.0
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	MK448672	Streptococcus phage Javan117, complete genome	1815-1848	0	1.0
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	MK448849	Streptococcus phage Javan128, complete genome	1815-1848	0	1.0
NC_019042_3	3.11\|1581969\|33\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581969-1582001	33	MK448973	Streptococcus phage Javan522, complete genome	1065-1097	0	1.0
NC_019042_3	3.11\|1581969\|33\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581969-1582001	33	MK448965	Streptococcus phage Javan506, complete genome	1065-1097	0	1.0
NC_019042_3	3.11\|1581969\|33\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581969-1582001	33	MK448959	Streptococcus phage Javan488, complete genome	1065-1097	0	1.0
NC_019042_3	3.11\|1581969\|33\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581969-1582001	33	MK448672	Streptococcus phage Javan117, complete genome	1065-1097	0	1.0
NC_019042_3	3.11\|1581969\|33\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581969-1582001	33	MK448849	Streptococcus phage Javan128, complete genome	1065-1097	0	1.0
NC_019042_3	3.11\|1581969\|33\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581969-1582001	33	MK448778	Streptococcus phage Javan493, complete genome	1065-1097	0	1.0
NC_019042_3	3.11\|1581969\|33\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581969-1582001	33	MK448949	Streptococcus phage Javan460, complete genome	1065-1097	0	1.0
NC_019042_3	3.11\|1581969\|33\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581969-1582001	33	MK448975	Streptococcus phage Javan526, complete genome	726-758	0	1.0
NC_019042_3	3.11\|1581969\|33\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581969-1582001	33	MK448782	Streptococcus phage Javan501, complete genome	1065-1097	0	1.0
NC_019042_2	2.4\|1131155\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131155-1131184	30	MK448856	Streptococcus phage Javan158, complete genome	10608-10637	1	0.967
NC_019042_2	2.6\|1131287\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131287-1131316	30	MK448862	Streptococcus phage Javan178, complete genome	8023-8052	1	0.967
NC_019042_2	2.6\|1131287\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131287-1131316	30	MK449010	Streptococcus phage Javan90, complete genome	10481-10510	1	0.967
NC_019042_2	2.6\|1131287\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131287-1131316	30	MK448681	Streptococcus phage Javan141, complete genome	7823-7852	1	0.967
NC_019042_2	2.6\|1131287\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131287-1131316	30	MK448845	Streptococcus phage Javan118, complete genome	9775-9804	1	0.967
NC_019042_2	2.6\|1131287\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131287-1131316	30	MK448833	Streptococcus phage Javan87, complete genome	10481-10510	1	0.967
NC_019042_2	2.7\|1131353\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131353-1131382	30	MK448672	Streptococcus phage Javan117, complete genome	19018-19047	1	0.967
NC_019042_2	2.7\|1131353\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131353-1131382	30	MK448849	Streptococcus phage Javan128, complete genome	18439-18468	1	0.967
NC_019042_2	2.11\|1131617\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131617-1131646	30	MK448769	Streptococcus phage Javan471, complete genome	30649-30678	1	0.967
NC_019042_2	2.11\|1131617\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131617-1131646	30	MK448684	Streptococcus phage Javan151, complete genome	30649-30678	1	0.967
NC_019042_2	2.15\|1131881\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131881-1131910	30	MK448672	Streptococcus phage Javan117, complete genome	17211-17240	1	0.967
NC_019042_2	2.15\|1131881\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131881-1131910	30	MK448849	Streptococcus phage Javan128, complete genome	16597-16626	1	0.967
NC_019042_2	2.16\|1131947\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131947-1131976	30	MK448946	Streptococcus phage Javan456, complete genome	34380-34409	1	0.967
NC_019042_2	2.16\|1131947\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131947-1131976	30	MK448858	Streptococcus phage Javan166, complete genome	35718-35747	1	0.967
NC_019042_2	2.16\|1131947\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131947-1131976	30	MK448860	Streptococcus phage Javan172, complete genome	29209-29238	1	0.967
NC_019042_2	2.16\|1131947\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131947-1131976	30	MK448775	Streptococcus phage Javan489, complete genome	32763-32792	1	0.967
NC_019042_2	2.16\|1131947\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131947-1131976	30	MK448794	Streptococcus phage Javan525, complete genome	29886-29915	1	0.967
NC_019042_2	2.16\|1131947\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131947-1131976	30	MK448970	Streptococcus phage Javan516, complete genome	35968-35997	1	0.967
NC_019042_2	2.16\|1131947\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131947-1131976	30	MK448795	Streptococcus phage Javan527, complete genome	36498-36527	1	0.967
NC_019042_2	2.16\|1131947\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131947-1131976	30	MK448953	Streptococcus phage Javan474, complete genome	34484-34513	1	0.967
NC_019042_2	2.16\|1131947\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131947-1131976	30	MK448944	Streptococcus phage Javan452, complete genome	33532-33561	1	0.967
NC_019042_2	2.16\|1131947\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131947-1131976	30	MK448679	Streptococcus phage Javan137, complete genome	27976-28005	1	0.967
NC_019042_2	2.16\|1131947\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131947-1131976	30	MK448864	Streptococcus phage Javan180, complete genome	20643-20672	1	0.967
NC_019042_2	2.16\|1131947\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131947-1131976	30	MK448682	Streptococcus phage Javan143, complete genome	29638-29667	1	0.967
NC_019042_2	2.16\|1131947\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131947-1131976	30	MK448765	Streptococcus phage Javan459, complete genome	29884-29913	1	0.967
NC_019042_2	2.16\|1131947\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131947-1131976	30	MK448957	Streptococcus phage Javan484, complete genome	35303-35332	1	0.967
NC_019042_3	3.14\|1582166\|35\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1582166-1582200	35	MK448767	Streptococcus phage Javan467, complete genome	4044-4078	1	0.971
NC_019042_3	3.14\|1582166\|35\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1582166-1582200	35	MK448771	Streptococcus phage Javan481, complete genome	4044-4078	1	0.971
NC_019042_3	3.14\|1582166\|35\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1582166-1582200	35	MK448942	Streptococcus phage Javan448, complete genome	4044-4078	1	0.971
NC_019042_3	3.14\|1582166\|35\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1582166-1582200	35	NC_004586	Streptococcus pyogenes phage 315.3, complete genome	4149-4183	1	0.971
NC_019042_3	3.14\|1582166\|35\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1582166-1582200	35	MK448681	Streptococcus phage Javan141, complete genome	4108-4142	1	0.971
NC_019042_3	3.14\|1582166\|35\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1582166-1582200	35	MK448964	Streptococcus phage Javan502, complete genome	4043-4077	1	0.971
NC_019042_3	3.14\|1582166\|35\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1582166-1582200	35	MK448943	Streptococcus phage Javan450, complete genome	4044-4078	1	0.971
NC_019042_3	3.14\|1582166\|35\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1582166-1582200	35	MK448972	Streptococcus phage Javan520, complete genome	4044-4078	1	0.971
NC_019042_3	3.14\|1582166\|35\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1582166-1582200	35	MK448786	Streptococcus phage Javan509, complete genome	4044-4078	1	0.971
NC_019042_3	3.14\|1582166\|35\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1582166-1582200	35	MK448774	Streptococcus phage Javan487, complete genome	4044-4078	1	0.971
NC_019042_3	3.14\|1582166\|35\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1582166-1582200	35	MK448777	Streptococcus phage Javan491, complete genome	4389-4423	1	0.971
NC_019042_2	2.3\|1131089\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131089-1131118	30	MK448946	Streptococcus phage Javan456, complete genome	41306-41335	2	0.933
NC_019042_2	2.3\|1131089\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131089-1131118	30	NC_004585	Streptococcus prophage 315.2, complete genome	37506-37535	2	0.933
NC_019042_2	2.3\|1131089\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131089-1131118	30	MK448966	Streptococcus phage Javan508, complete genome	37361-37390	2	0.933
NC_019042_2	2.3\|1131089\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131089-1131118	30	MK448795	Streptococcus phage Javan527, complete genome	42961-42990	2	0.933
NC_019042_2	2.3\|1131089\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131089-1131118	30	NC_004584	Streptococcus prophage 315.1, complete genome	36297-36326	2	0.933
NC_019042_2	2.3\|1131089\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131089-1131118	30	MK448772	Streptococcus phage Javan483, complete genome	37604-37633	2	0.933
NC_019042_2	2.3\|1131089\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131089-1131118	30	MK448941	Streptococcus phage Javan446, complete genome	39377-39406	2	0.933
NC_019042_2	2.3\|1131089\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131089-1131118	30	MK448962	Streptococcus phage Javan496, complete genome	27788-27817	2	0.933
NC_019042_2	2.3\|1131089\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131089-1131118	30	MK448978	Streptococcus phage Javan532, complete genome	36191-36220	2	0.933
NC_019042_2	2.3\|1131089\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131089-1131118	30	MK448785	Streptococcus phage Javan507, complete genome	36192-36221	2	0.933
NC_019042_2	2.4\|1131155\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131155-1131184	30	MK448798	Streptococcus phage Javan533, complete genome	32152-32181	2	0.933
NC_019042_2	2.4\|1131155\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131155-1131184	30	NC_028700	Streptococcus phage T12, complete genome	32005-32034	2	0.933
NC_019042_2	2.4\|1131155\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131155-1131184	30	MK448790	Streptococcus phage Javan515, complete genome	31921-31950	2	0.933
NC_019042_2	2.4\|1131155\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131155-1131184	30	MK448783	Streptococcus phage Javan503, complete genome	31067-31096	2	0.933
NC_019042_2	2.4\|1131155\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131155-1131184	30	MK448967	Streptococcus phage Javan510, complete genome	32153-32182	2	0.933
NC_019042_2	2.4\|1131155\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131155-1131184	30	NC_004588	Streptococcus prophage 315.5, complete genome	32302-32331	2	0.933
NC_019042_2	2.6\|1131287\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131287-1131316	30	MK448675	Streptococcus phage Javan129, complete genome	12101-12130	2	0.933
NC_019042_2	2.6\|1131287\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131287-1131316	30	MK448771	Streptococcus phage Javan481, complete genome	8047-8076	2	0.933
NC_019042_2	2.6\|1131287\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131287-1131316	30	MK448973	Streptococcus phage Javan522, complete genome	9952-9981	2	0.933
NC_019042_2	2.6\|1131287\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131287-1131316	30	MK448969	Streptococcus phage Javan514, complete genome	10918-10947	2	0.933
NC_019042_2	2.6\|1131287\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131287-1131316	30	MK448972	Streptococcus phage Javan520, complete genome	7972-8001	2	0.933
NC_019042_2	2.6\|1131287\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131287-1131316	30	MK448763	Streptococcus phage Javan451, complete genome	9165-9194	2	0.933
NC_019042_2	2.6\|1131287\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131287-1131316	30	MK448774	Streptococcus phage Javan487, complete genome	8032-8061	2	0.933
NC_019042_2	2.6\|1131287\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131287-1131316	30	MK448778	Streptococcus phage Javan493, complete genome	9967-9996	2	0.933
NC_019042_2	2.6\|1131287\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131287-1131316	30	MK448773	Streptococcus phage Javan485, complete genome	10918-10947	2	0.933
NC_019042_2	2.6\|1131287\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131287-1131316	30	MK448777	Streptococcus phage Javan491, complete genome	8263-8292	2	0.933
NC_019042_2	2.8\|1131419\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131419-1131448	30	MK448960	Streptococcus phage Javan492, complete genome	37581-37610	2	0.933
NC_019042_2	2.8\|1131419\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131419-1131448	30	MK448762	Streptococcus phage Javan447, complete genome	37714-37743	2	0.933
NC_019042_2	2.8\|1131419\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131419-1131448	30	MK448795	Streptococcus phage Javan527, complete genome	43794-43823	2	0.933
NC_019042_2	2.8\|1131419\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131419-1131448	30	MK448791	Streptococcus phage Javan517, complete genome	37846-37875	2	0.933
NC_019042_2	2.8\|1131419\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131419-1131448	30	NC_004587	Streptococcus prophage 315.4, complete genome	37422-37451	2	0.933
NC_019042_2	2.8\|1131419\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131419-1131448	30	NC_003157	Streptococcus pyogenes strain NIH1 putative methionine sulfoxide reductase gene, complete cds; and integrated temperate phage PhiNIH1.1, complete genome	38692-38721	2	0.933
NC_019042_2	2.8\|1131419\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131419-1131448	30	MK448941	Streptococcus phage Javan446, complete genome	41238-41267	2	0.933
NC_019042_2	2.8\|1131419\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131419-1131448	30	MK448977	Streptococcus phage Javan530, complete genome	37327-37356	2	0.933
NC_019042_2	2.8\|1131419\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131419-1131448	30	MK448958	Streptococcus phage Javan486, complete genome	37787-37816	2	0.933
NC_019042_2	2.8\|1131419\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131419-1131448	30	MK448788	Streptococcus phage Javan511, complete genome	37327-37356	2	0.933
NC_019042_2	2.8\|1131419\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131419-1131448	30	MK448954	Streptococcus phage Javan476, complete genome	37454-37483	2	0.933
NC_019042_2	2.8\|1131419\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131419-1131448	30	MK448950	Streptococcus phage Javan464, complete genome	38051-38080	2	0.933
NC_019042_2	2.8\|1131419\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131419-1131448	30	MK448957	Streptococcus phage Javan484, complete genome	42848-42877	2	0.933
NC_019042_2	2.8\|1131419\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131419-1131448	30	MK448865	Streptococcus phage Javan182, complete genome	30599-30628	2	0.933
NC_019042_2	2.8\|1131419\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131419-1131448	30	MK448694	Streptococcus phage Javan179, complete genome	38483-38512	2	0.933
NC_019042_2	2.9\|1131485\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131485-1131514	30	MK448680	Streptococcus phage Javan139, complete genome	9037-9066	2	0.933
NC_019042_2	2.16\|1131947\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131947-1131976	30	MK448792	Streptococcus phage Javan521, complete genome	29971-30000	2	0.933
NC_019042_2	2.16\|1131947\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131947-1131976	30	NC_009018	Streptococcus phage phi3396, complete genome	27622-27651	2	0.933
NC_019042_2	2.16\|1131947\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131947-1131976	30	NC_004584	Streptococcus prophage 315.1, complete genome	29564-29593	2	0.933
NC_019042_2	2.16\|1131947\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131947-1131976	30	MK448941	Streptococcus phage Javan446, complete genome	32716-32745	2	0.933
NC_019042_2	2.16\|1131947\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131947-1131976	30	MK448770	Streptococcus phage Javan477, complete genome	29971-30000	2	0.933
NC_019042_2	2.16\|1131947\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131947-1131976	30	MK448978	Streptococcus phage Javan532, complete genome	29459-29488	2	0.933
NC_019042_2	2.16\|1131947\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131947-1131976	30	MK448785	Streptococcus phage Javan507, complete genome	29459-29488	2	0.933
NC_019042_3	3.7\|1581706\|33\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581706-1581738	33	MK448960	Streptococcus phage Javan492, complete genome	15044-15076	2	0.939
NC_019042_3	3.7\|1581706\|33\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581706-1581738	33	MK448762	Streptococcus phage Javan447, complete genome	15171-15203	2	0.939
NC_019042_3	3.7\|1581706\|33\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581706-1581738	33	MK448965	Streptococcus phage Javan506, complete genome	16281-16313	2	0.939
NC_019042_3	3.7\|1581706\|33\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581706-1581738	33	MK448959	Streptococcus phage Javan488, complete genome	16281-16313	2	0.939
NC_019042_3	3.7\|1581706\|33\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581706-1581738	33	MK448849	Streptococcus phage Javan128, complete genome	12766-12798	2	0.939
NC_019042_3	3.7\|1581706\|33\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581706-1581738	33	MK448949	Streptococcus phage Javan460, complete genome	16941-16973	2	0.939
NC_019042_3	3.7\|1581706\|33\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581706-1581738	33	MK448958	Streptococcus phage Javan486, complete genome	15248-15280	2	0.939
NC_019042_3	3.7\|1581706\|33\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581706-1581738	33	MK448954	Streptococcus phage Javan476, complete genome	14647-14679	2	0.939
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	MK448965	Streptococcus phage Javan506, complete genome	1819-1852	2	0.941
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	MK448959	Streptococcus phage Javan488, complete genome	1819-1852	2	0.941
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	MK448949	Streptococcus phage Javan460, complete genome	1819-1852	2	0.941
NC_019042_2	2.3\|1131089\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131089-1131118	30	MK448852	Streptococcus phage Javan140, complete genome	37186-37215	3	0.9
NC_019042_2	2.3\|1131089\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131089-1131118	30	MK448973	Streptococcus phage Javan522, complete genome	38194-38223	3	0.9
NC_019042_2	2.3\|1131089\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131089-1131118	30	MK448778	Streptococcus phage Javan493, complete genome	37837-37866	3	0.9
NC_019042_2	2.3\|1131089\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131089-1131118	30	MK448686	Streptococcus phage Javan157, complete genome	38177-38206	3	0.9
NC_019042_2	2.3\|1131089\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131089-1131118	30	MK448951	Streptococcus phage Javan470, complete genome	36702-36731	3	0.9
NC_019042_2	2.3\|1131089\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131089-1131118	30	MK448950	Streptococcus phage Javan464, complete genome	37221-37250	3	0.9
NC_019042_2	2.3\|1131089\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131089-1131118	30	MK448975	Streptococcus phage Javan526, complete genome	38619-38648	3	0.9
NC_019042_2	2.3\|1131089\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131089-1131118	30	MK448782	Streptococcus phage Javan501, complete genome	40978-41007	3	0.9
NC_019042_2	2.8\|1131419\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131419-1131448	30	JX409894	Streptococcus phage LYGO9, complete genome	7691-7720	3	0.9
NC_019042_2	2.8\|1131419\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131419-1131448	30	JX409895	Streptococcus phage JX01, complete genome	19538-19567	3	0.9
NC_019042_2	2.8\|1131419\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131419-1131448	30	MH853356	Streptococcus phage LF2, partial genome	21966-21995	3	0.9
NC_019042_2	2.8\|1131419\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131419-1131448	30	MK448871	Streptococcus phage Javan196, complete genome	38745-38774	3	0.9
NC_019042_2	2.8\|1131419\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131419-1131448	30	MK448971	Streptococcus phage Javan52, complete genome	41423-41452	3	0.9
NC_019042_2	2.8\|1131419\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131419-1131448	30	MK448956	Streptococcus phage Javan48, complete genome	39506-39535	3	0.9
NC_019042_2	2.8\|1131419\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131419-1131448	30	MK448775	Streptococcus phage Javan489, complete genome	40289-40318	3	0.9
NC_019042_2	2.8\|1131419\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131419-1131448	30	MK448961	Streptococcus phage Javan494, complete genome	37684-37713	3	0.9
NC_019042_2	2.8\|1131419\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131419-1131448	30	MK448794	Streptococcus phage Javan525, complete genome	37347-37376	3	0.9
NC_019042_2	2.8\|1131419\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131419-1131448	30	MK448697	Streptococcus phage Javan185, complete genome	38745-38774	3	0.9
NC_019042_2	2.8\|1131419\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131419-1131448	30	MK448953	Streptococcus phage Javan474, complete genome	42010-42039	3	0.9
NC_019042_2	2.8\|1131419\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131419-1131448	30	MK448693	Streptococcus phage Javan177, complete genome	38745-38774	3	0.9
NC_019042_2	2.8\|1131419\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131419-1131448	30	MK448945	Streptococcus phage Javan454, complete genome	37845-37874	3	0.9
NC_019042_2	2.8\|1131419\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131419-1131448	30	MK448729	Streptococcus phage Javan31, complete genome	36501-36530	3	0.9
NC_019042_2	2.8\|1131419\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131419-1131448	30	MK448696	Streptococcus phage Javan183, complete genome	38745-38774	3	0.9
NC_019042_2	2.8\|1131419\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131419-1131448	30	MK448837	Streptococcus phage Javan10, complete genome	34744-34773	3	0.9
NC_019042_2	2.8\|1131419\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131419-1131448	30	MK448868	Streptococcus phage Javan188, complete genome	38746-38775	3	0.9
NC_019042_2	2.8\|1131419\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131419-1131448	30	MK448691	Streptococcus phage Javan17, complete genome	36501-36530	3	0.9
NC_019042_2	2.8\|1131419\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131419-1131448	30	MK448866	Streptococcus phage Javan184, complete genome	38745-38774	3	0.9
NC_019042_2	2.8\|1131419\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131419-1131448	30	MK448765	Streptococcus phage Javan459, complete genome	37345-37374	3	0.9
NC_019042_2	2.8\|1131419\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131419-1131448	30	MK448699	Streptococcus phage Javan189, complete genome	38745-38774	3	0.9
NC_019042_2	2.8\|1131419\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131419-1131448	30	MK448867	Streptococcus phage Javan186, complete genome	38745-38774	3	0.9
NC_019042_2	2.8\|1131419\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131419-1131448	30	MK448948	Streptococcus phage Javan46, complete genome	36444-36473	3	0.9
NC_019042_2	2.8\|1131419\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131419-1131448	30	MK448768	Streptococcus phage Javan47, complete genome	38660-38689	3	0.9
NC_019042_2	2.8\|1131419\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131419-1131448	30	MK448793	Streptococcus phage Javan523, complete genome	39058-39087	3	0.9
NC_019042_2	2.8\|1131419\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131419-1131448	30	MK448767	Streptococcus phage Javan467, complete genome	32850-32879	4	0.867
NC_019042_2	2.8\|1131419\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131419-1131448	30	NC_004586	Streptococcus pyogenes phage 315.3, complete genome	32955-32984	4	0.867
NC_019042_2	2.8\|1131419\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131419-1131448	30	MK448943	Streptococcus phage Javan450, complete genome	32850-32879	4	0.867
NC_019042_2	2.8\|1131419\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131419-1131448	30	MK448786	Streptococcus phage Javan509, complete genome	32850-32879	4	0.867
NC_019042_2	2.8\|1131419\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131419-1131448	30	MK448742	Streptococcus phage Javan37, complete genome	35559-35588	4	0.867
NC_019042_2	2.21\|1132080\|26\|NC_019042\|PILER-CR	1132080-1132105	26	NZ_LR723671	Rhizobium flavum strain YW14 plasmid 2	153838-153863	4	0.846
NC_019042_2	2.22\|1132146\|27\|NC_019042\|PILER-CR	1132146-1132172	27	NZ_CP032629	Lactococcus sp. 1JSPR-7 plasmid unnamed2, complete sequence	4261-4287	4	0.852
NC_019042_2	2.8\|1131419\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131419-1131448	30	MK448829	Streptococcus phage Javan7, complete genome	36109-36138	5	0.833
NC_019042_2	2.8\|1131419\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131419-1131448	30	MK448749	Streptococcus phage Javan39, complete genome	41014-41043	5	0.833
NC_019042_2	2.8\|1131419\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131419-1131448	30	MH853355	Streptococcus phage LF1, complete genome	26975-27004	5	0.833
NC_019042_2	2.8\|1131419\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131419-1131448	30	NC_009819	Streptococcus phage P9, complete genome	37569-37598	5	0.833
NC_019042_2	2.8\|1131419\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131419-1131448	30	AY149214	Streptococcus agalactiae bacteriophage B30 peptidoglycan endolysin gene, complete cds	1499-1528	5	0.833
NC_019042_2	2.8\|1131419\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131419-1131448	30	MH853358	Streptococcus phage LF4, complete genome	26975-27004	5	0.833
NC_019042_2	2.8\|1131419\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131419-1131448	30	MK448680	Streptococcus phage Javan139, complete genome	34878-34907	5	0.833
NC_019042_2	2.8\|1131419\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131419-1131448	30	MK448777	Streptococcus phage Javan491, complete genome	32809-32838	5	0.833
NC_019042_2	2.9\|1131485\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131485-1131514	30	NC_014023	Bacillus megaterium QM B1551 plasmid pBM700, complete sequence	74913-74942	5	0.833
NC_019042_2	2.22\|1132146\|27\|NC_019042\|PILER-CR	1132146-1132172	27	NZ_LR214986	Mycoplasma cynos strain NCTC10142 plasmid 13	202493-202519	5	0.815
NC_019042_3	3.6\|1581640\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581640-1581673	34	NZ_KP342511	Enterococcus faecium isolate N12-493 plasmid pEfm12493, complete sequence	59850-59883	5	0.853
NC_019042_2	2.5\|1131221\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131221-1131250	30	MT227925	Vibrio phage phiV141, complete genome	24142-24171	6	0.8
NC_019042_2	2.8\|1131419\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131419-1131448	30	MK448736	Streptococcus phage Javan35, complete genome	35998-36027	6	0.8
NC_019042_2	2.8\|1131419\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131419-1131448	30	MK448781	Streptococcus phage Javan5, complete genome	38020-38049	6	0.8
NC_019042_2	2.8\|1131419\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131419-1131448	30	MK448938	Streptococcus phage Javan44, complete genome	35999-36028	6	0.8
NC_019042_2	2.8\|1131419\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131419-1131448	30	MK448859	Streptococcus phage Javan170, complete genome	39845-39874	6	0.8
NC_019042_2	2.8\|1131419\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131419-1131448	30	MK448911	Streptococcus phage Javan34, complete genome	35998-36027	6	0.8
NC_019042_2	2.8\|1131419\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131419-1131448	30	MK448851	Streptococcus phage Javan14, complete genome	40391-40420	6	0.8
NC_019042_2	2.8\|1131419\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131419-1131448	30	MK448916	Streptococcus phage Javan36, complete genome	35998-36027	6	0.8
NC_019042_2	2.8\|1131419\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131419-1131448	30	MK448688	Streptococcus phage Javan161, complete genome	39803-39832	6	0.8
NC_019042_2	2.8\|1131419\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131419-1131448	30	MK448683	Streptococcus phage Javan149, complete genome	36823-36852	6	0.8
NC_019042_2	2.15\|1131881\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131881-1131910	30	NZ_CP046163	Vibrio sp. THAF191c plasmid pTHAF191c_b, complete sequence	345784-345813	6	0.8
NC_019042_2	2.15\|1131881\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131881-1131910	30	NZ_CP046066	Vibrio sp. THAF191d plasmid pTHAF191d_b, complete sequence	530074-530103	6	0.8
NC_019042_2	2.15\|1131881\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131881-1131910	30	NZ_CP045356	Vibrio sp. THAF64 plasmid pTHAF64_a, complete sequence	1230736-1230765	6	0.8
NC_019042_2	2.16\|1131947\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131947-1131976	30	NZ_CP043441	Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence	56100-56129	6	0.8
NC_019042_2	2.22\|1132146\|27\|NC_019042\|PILER-CR	1132146-1132172	27	NZ_CP045339	Vibrio sp. THAF190c plasmid pTHAF190c_a, complete sequence	1178375-1178401	6	0.778
NC_019042_3	3.3\|1581442\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581442-1581475	34	NZ_LR214986	Mycoplasma cynos strain NCTC10142 plasmid 13	760384-760417	6	0.824
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	HQ317291	Synechococcus phage S-RIM2 R9_2006, complete genome	110799-110832	6	0.824
NC_019042_2	2.4\|1131155\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131155-1131184	30	NZ_AP017296	Nostoc sp. NIES-3756 plasmid pNOS3756_1, complete sequence	152702-152731	7	0.767
NC_019042_2	2.5\|1131221\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131221-1131250	30	NC_047969	Klebsiella virus KP32 isolate 194, complete genome	35601-35630	7	0.767
NC_019042_2	2.6\|1131287\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131287-1131316	30	NZ_CP046573	Rhodococcus sp. WAY2 plasmid pRWAY01, complete sequence	976081-976110	7	0.767
NC_019042_2	2.8\|1131419\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131419-1131448	30	MK448858	Streptococcus phage Javan166, complete genome	43899-43928	7	0.767
NC_019042_2	2.8\|1131419\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131419-1131448	30	MK448848	Streptococcus phage Javan126, complete genome	34354-34383	7	0.767
NC_019042_2	2.8\|1131419\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131419-1131448	30	MK448857	Streptococcus phage Javan164, complete genome	34354-34383	7	0.767
NC_019042_2	2.8\|1131419\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131419-1131448	30	MK448677	Streptococcus phage Javan133, complete genome	35354-35383	7	0.767
NC_019042_2	2.8\|1131419\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131419-1131448	30	MK448679	Streptococcus phage Javan137, complete genome	35927-35956	7	0.767
NC_019042_2	2.8\|1131419\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131419-1131448	30	MK448690	Streptococcus phage Javan169, complete genome	40774-40803	7	0.767
NC_019042_2	2.8\|1131419\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131419-1131448	30	MK448673	Streptococcus phage Javan119, complete genome	43832-43861	7	0.767
NC_019042_2	2.8\|1131419\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131419-1131448	30	MK448685	Streptococcus phage Javan155, complete genome	33522-33551	7	0.767
NC_019042_2	2.8\|1131419\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131419-1131448	30	MK448853	Streptococcus phage Javan144, complete genome	33522-33551	7	0.767
NC_019042_3	3.2\|1581377\|33\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581377-1581409	33	MK448915	Streptococcus phage Javan350, complete genome	12353-12385	7	0.788
NC_019042_3	3.2\|1581377\|33\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581377-1581409	33	NZ_CP024656	Bacillus cereus strain MLY1 plasmid pMLY1.2, complete sequence	52431-52463	7	0.788
NC_019042_3	3.2\|1581377\|33\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581377-1581409	33	NZ_CP020745	Bacillus mycoides strain Gnyt1 plasmid unnamed2, complete sequence	4631-4663	7	0.788
NC_019042_3	3.6\|1581640\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581640-1581673	34	NZ_CP015608	Bacillus safensis strain U14-5 plasmid unnamed1, complete sequence	32013-32046	7	0.794
NC_019042_3	3.8\|1581771\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581771-1581804	34	NZ_LR214999	Mycoplasma conjunctivae strain NCTC10147 plasmid 3	2108-2141	7	0.794
NC_019042_3	3.8\|1581771\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581771-1581804	34	NZ_LR215005	Mycoplasma conjunctivae strain NCTC10147 plasmid 9	7662-7695	7	0.794
NC_019042_3	3.8\|1581771\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581771-1581804	34	NZ_LR215007	Mycoplasma conjunctivae strain NCTC10147 plasmid 11	14082-14115	7	0.794
NC_019042_3	3.8\|1581771\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581771-1581804	34	LR214969	Mycoplasma fermentans strain NCTC10117 genome assembly, plasmid: 15	15275-15308	7	0.794
NC_019042_2	2.3\|1131089\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131089-1131118	30	NZ_CP053858	Rhizobium pusense strain 76 plasmid pR76, complete sequence	210056-210085	8	0.733
NC_019042_2	2.8\|1131419\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131419-1131448	30	MK448682	Streptococcus phage Javan143, complete genome	37445-37474	8	0.733
NC_019042_2	2.8\|1131419\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131419-1131448	30	MK448854	Streptococcus phage Javan146, complete genome	40185-40214	8	0.733
NC_019042_2	2.20\|1132145\|31\|NC_019042\|CRISPRCasFinder,CRT	1132145-1132175	31	NZ_CP017949	Tenericutes bacterium MO-XQ plasmid unnamed, complete sequence	13947-13977	8	0.742
NC_019042_2	2.20\|1132145\|31\|NC_019042\|CRISPRCasFinder,CRT	1132145-1132175	31	MN850622	Escherichia phage mobillu, complete genome	67742-67772	8	0.742
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	NZ_AP017960	Synechococcus sp. NIES-970 plasmid plasmid1 DNA, complete sequence	49175-49208	8	0.765
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	JF974299	Synechococcus phage S-CAM8 strain 0608SB47, * SEQUENCING IN PROGRESS *, 4 unordered pieces	14277-14310	8	0.765
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	KU686203	Synechococcus phage S-CAM8 isolate 0810PA29, complete genome	104924-104957	8	0.765
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	NC_021530	Synechococcus phage S-CAM8 strain S-CAM8 06008BI06, complete genome	105258-105291	8	0.765
NC_019042_3	3.11\|1581969\|33\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581969-1582001	33	NC_008308	Sphingomonas sp. KA1 plasmid pCAR3 DNA, complete sequence	4734-4766	8	0.758
NC_019042_3	3.11\|1581969\|33\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581969-1582001	33	NZ_CP009453	Sphingopyxis sp. 113P3 plasmid unnamed, complete sequence	170501-170533	8	0.758
NC_019042_3	3.11\|1581969\|33\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581969-1582001	33	NZ_CP046254	Sphingobium sp. CAP-1 plasmid p1, complete sequence	140053-140085	8	0.758
NC_019042_3	3.11\|1581969\|33\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581969-1582001	33	NC_020542	Sphingomonas sp. MM-1 plasmid pISP0, complete sequence	160132-160164	8	0.758
NC_019042_3	3.11\|1581969\|33\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581969-1582001	33	NZ_CP015989	Sphingobium sp. EP60837 plasmid pEP2, complete sequence	39778-39810	8	0.758
NC_019042_2	2.14\|1131815\|30\|NC_019042\|PILER-CR,CRISPRCasFinder,CRT	1131815-1131844	30	CP035920	Vibrio cidicii strain 2423-01 plasmid unnamed1, complete sequence	69996-70025	9	0.7
NC_019042_2	2.19\|1132079\|30\|NC_019042\|CRISPRCasFinder,CRT	1132079-1132108	30	NC_031062	Erwinia phage vB_EamP_Frozen, complete genome	52651-52680	9	0.7
NC_019042_2	2.19\|1132079\|30\|NC_019042\|CRISPRCasFinder,CRT	1132079-1132108	30	KX098391	Erwinia phage vB_EamP_Gutmeister, complete genome	48674-48703	9	0.7
NC_019042_2	2.19\|1132079\|30\|NC_019042\|CRISPRCasFinder,CRT	1132079-1132108	30	KX098390	Erwinia phage vB_EamP_Rexella, complete genome	52943-52972	9	0.7
NC_019042_2	2.19\|1132079\|30\|NC_019042\|CRISPRCasFinder,CRT	1132079-1132108	30	KF806588	Erwinia phage Ea9-2, complete genome	53029-53058	9	0.7
NC_019042_3	3.3\|1581442\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581442-1581475	34	MH622943	Myoviridae sp. isolate ctbc_4, complete genome	319555-319588	9	0.735
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	NZ_CP024656	Bacillus cereus strain MLY1 plasmid pMLY1.2, complete sequence	59659-59692	9	0.735
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	NZ_CP021437	Bacillus thuringiensis strain C15 plasmid pBMB240, complete sequence	7419-7452	9	0.735
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	NZ_CP021437	Bacillus thuringiensis strain C15 plasmid pBMB240, complete sequence	109815-109848	9	0.735
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	NZ_CP016489	Synechococcus sp. PCC 8807 plasmid unnamed6, complete sequence	138681-138714	9	0.735
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	NZ_CP016476	Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence	235281-235314	9	0.735
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	KX349325	Cyanophage S-RIM12 isolate W1_24_0910, complete genome	106975-107008	9	0.735
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	KX349280	Synechococcus phage S-RIM2 isolate W2_02_0709, complete genome	110952-110985	9	0.735
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	KX349273	Synechococcus phage S-RIM2 isolate W1_01_0910, complete genome	110956-110989	9	0.735
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	KX349284	Synechococcus phage S-RIM2 isolate W2_39_0910, complete genome	110979-111012	9	0.735
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	KX349275	Synechococcus phage S-RIM2 isolate W1_08_0709, complete genome	110953-110986	9	0.735
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	KX349270	Synechococcus phage S-RIM2 isolate RW_40_1112, complete genome	110816-110849	9	0.735
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	KX349255	Synechococcus phage S-RIM2 isolate RW_01_0709, complete genome	110811-110844	9	0.735
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	KX349243	Synechococcus phage S-RIM2 isolate Np_11_1112, complete genome	110819-110852	9	0.735
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	KX349269	Synechococcus phage S-RIM2 isolate RW_34_0905, complete genome	110814-110847	9	0.735
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	KX349326	Cyanophage S-RIM12 isolate WH_05_0310, complete genome	108013-108046	9	0.735
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	KX349271	Synechococcus phage S-RIM2 isolate Sn_25_0709, complete genome	110818-110851	9	0.735
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	KX349249	Synechococcus phage S-RIM2 isolate Np_20_0912, complete genome	110813-110846	9	0.735
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	KX349327	Cyanophage S-RIM12 isolate WH_07_0310, complete genome	107093-107126	9	0.735
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	KX349322	Cyanophage S-RIM12 isolate Sn_31_0910, complete genome	106983-107016	9	0.735
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	KX349320	Cyanophage S-RIM12 isolate RW_29_1109, complete genome	107531-107564	9	0.735
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	KX349310	Cyanophage S-RIM12 isolate RW_01_0310, complete genome	107508-107541	9	0.735
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	KX349227	Synechococcus phage S-RIM2 isolate Fa_10_0709, complete genome	110812-110845	9	0.735
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	KX349256	Synechococcus phage S-RIM2 isolate RW_02_0113, complete genome	110815-110848	9	0.735
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	KX349233	Synechococcus phage S-RIM2 isolate LIS_11_1010, complete genome	110824-110857	9	0.735
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	KX349260	Synechococcus phage S-RIM2 isolate RW_11_0905, complete genome	110812-110845	9	0.735
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	KX349259	Synechococcus phage S-RIM2 isolate RW_08_1112, complete genome	109650-109683	9	0.735
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	KX349266	Synechococcus phage S-RIM2 isolate RW_26_0905, complete genome	109651-109684	9	0.735
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	KX349261	Synechococcus phage S-RIM2 isolate RW_12_0113, complete genome	110818-110851	9	0.735
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	KX349321	Cyanophage S-RIM12 isolate Sn_07_0910, complete genome	107511-107544	9	0.735
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	KX349324	Cyanophage S-RIM12 isolate W1_12_0610, complete genome	107461-107494	9	0.735
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	KX349250	Synechococcus phage S-RIM2 isolate Np_23_1112, complete genome	110817-110850	9	0.735
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	KX349265	Synechococcus phage S-RIM2 isolate RW_17_0113, complete genome	110804-110837	9	0.735
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	KX349240	Synechococcus phage S-RIM2 isolate Np_03_1112, complete genome	109644-109677	9	0.735
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	KX349258	Synechococcus phage S-RIM2 isolate RW_03_0709, complete genome	110811-110844	9	0.735
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	KX349236	Synechococcus phage S-RIM2 isolate NJ_05_1013, complete genome	109648-109681	9	0.735
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	KX349282	Synechococcus phage S-RIM2 isolate W2_14_0910, complete genome	110828-110861	9	0.735
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	KX349234	Synechococcus phage S-RIM2 isolate LIS_12_1010, complete genome	110729-110762	9	0.735
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	KX349229	Synechococcus phage S-RIM2 isolate LIS_01_1010, complete genome	110728-110761	9	0.735
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	KX349252	Synechococcus phage S-RIM2 isolate Np_31_1112, complete genome	110801-110834	9	0.735
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	KX349314	Cyanophage S-RIM12 isolate RW_07_1112, complete genome	107532-107565	9	0.735
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	KX349231	Synechococcus phage S-RIM2 isolate LIS_06_1010, complete genome	111081-111114	9	0.735
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	KX349274	Synechococcus phage S-RIM2 isolate W1_03_0709, complete genome	111295-111328	9	0.735
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	KX349308	Cyanophage S-RIM12 isolate Np_15_0310, complete genome	108012-108045	9	0.735
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	KX349316	Cyanophage S-RIM12 isolate RW_22_0110, complete genome	107534-107567	9	0.735
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	KX349312	Cyanophage S-RIM12 isolate RW_04_0709, complete genome	107538-107571	9	0.735
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	KX349267	Synechococcus phage S-RIM2 isolate RW_29_1112, complete genome	110813-110846	9	0.735
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	KX349253	Synechococcus phage S-RIM2 isolate Np_33_0912, complete genome	110812-110845	9	0.735
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	KX349244	Synechococcus phage S-RIM2 isolate Np_12_0912, complete genome	110819-110852	9	0.735
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	KX349226	Synechococcus phage S-RIM2 isolate Fa_02_0709, complete genome	110808-110841	9	0.735
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	KX349232	Synechococcus phage S-RIM2 isolate LIS_09_1010, complete genome	110807-110840	9	0.735
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	KX349263	Synechococcus phage S-RIM2 isolate RW_14_1112, complete genome	110822-110855	9	0.735
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	NC_020859	Synechococcus phage S-RIM2 R1_1999, complete genome	110811-110844	9	0.735
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	KX349257	Synechococcus phage S-RIM2 isolate RW_02_0709, complete genome	110811-110844	9	0.735
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	HQ317290	Synechococcus phage S-RIM2 R21_2007, complete genome	110813-110846	9	0.735
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	KX349279	Synechococcus phage S-RIM2 isolate W1_16_0709, complete genome	110816-110849	9	0.735
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	KX349262	Synechococcus phage S-RIM2 isolate RW_12_0709, complete genome	110591-110624	9	0.735
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	KX349277	Synechococcus phage S-RIM2 isolate W1_12_0909, complete genome	110954-110987	9	0.735
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	KX349238	Synechococcus phage S-RIM2 isolate Np_01_1112, complete genome	110812-110845	9	0.735
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	KX349254	Synechococcus phage S-RIM2 isolate Np_36_1112, complete genome	110820-110853	9	0.735
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	KX349242	Synechococcus phage S-RIM2 isolate Np_06_0912, complete genome	110819-110852	9	0.735
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	KX349251	Synechococcus phage S-RIM2 isolate Np_24_1112, complete genome	110813-110846	9	0.735
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	KX349281	Synechococcus phage S-RIM2 isolate W2_13_0910, complete genome	110811-110844	9	0.735
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	KX349247	Synechococcus phage S-RIM2 isolate Np_15_1112, complete genome	110813-110846	9	0.735
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	KX349228	Synechococcus phage S-RIM2 isolate Fa_24_0709, complete genome	110810-110843	9	0.735
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	KX349268	Synechococcus phage S-RIM2 isolate RW_30_0905, complete genome	110816-110849	9	0.735
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	KX349315	Cyanophage S-RIM12 isolate RW_14_0101, complete genome	107546-107579	9	0.735
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	KX349241	Synechococcus phage S-RIM2 isolate Np_04_1112, complete genome	110816-110849	9	0.735
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	KX349317	Cyanophage S-RIM12 isolate RW_25_0210, complete genome	107374-107407	9	0.735
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	KX349276	Synechococcus phage S-RIM2 isolate W1_09_0709, complete genome	110811-110844	9	0.735
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	KX349311	Cyanophage S-RIM12 isolate RW_04_0310, complete genome	108010-108043	9	0.735
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	KX349264	Synechococcus phage S-RIM2 isolate RW_16_0905, complete genome	110813-110846	9	0.735
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	KX349323	Cyanophage S-RIM12 isolate W1_08_0910, complete genome	106960-106993	9	0.735
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	KX349313	Cyanophage S-RIM12 isolate RW_06_0310, complete genome	106958-106991	9	0.735
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	KX349245	Synechococcus phage S-RIM2 isolate Np_14_0912, complete genome	110802-110835	9	0.735
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	KX349248	Synechococcus phage S-RIM2 isolate Np_19_1112, complete genome	109648-109681	9	0.735
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	KX349272	Synechococcus phage S-RIM2 isolate W1_01_0709, complete genome	110811-110844	9	0.735
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	KX349235	Synechococcus phage S-RIM2 isolate LIS_14_1013, complete genome	110814-110847	9	0.735
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	NC_015285	Prochlorococcus phage Syn33, complete genome	107526-107559	9	0.735
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	KX349283	Synechococcus phage S-RIM2 isolate W2_32_0910, complete genome	110943-110976	9	0.735
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	KX349230	Synechococcus phage S-RIM2 isolate LIS_02_1013, complete genome	111158-111191	9	0.735
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	KX349309	Cyanophage S-RIM12 isolate Np_22_1112, complete genome	107369-107402	9	0.735
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	KX349246	Synechococcus phage S-RIM2 isolate Np_15_0709, complete genome	110832-110865	9	0.735
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	KX349237	Synechococcus phage S-RIM2 isolate Np_01_0709, complete genome	110814-110847	9	0.735
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	KX349319	Cyanophage S-RIM12 isolate RW_28_1109, complete genome	106568-106601	9	0.735
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	KX349307	Cyanophage S-RIM12 isolate Np_14_0310, complete genome	106574-106607	9	0.735
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	KX349318	Cyanophage S-RIM12 isolate RW_27_0310, complete genome	107597-107630	9	0.735
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	KX349278	Synechococcus phage S-RIM2 isolate W1_13_0709, complete genome	110954-110987	9	0.735
NC_019042_3	3.12\|1582034\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1582034-1582067	34	NC_017401	Borreliella burgdorferi N40 plasmid N40_cp26, complete sequence	17178-17211	9	0.735
NC_019042_3	3.3\|1581442\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581442-1581475	34	NZ_CP053657	Bacillus cereus strain CTMA_1571 plasmid p.1, complete sequence	102001-102034	10	0.706
NC_019042_3	3.9\|1581837\|34\|NC_019042\|CRISPRCasFinder,CRT,PILER-CR	1581837-1581870	34	MH616963	CrAssphage sp. isolate ctbg_1, complete genome	69553-69586	10	0.706

1. spacer 2.3|1131089|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448679 (Streptococcus phage Javan137, complete genome) position: , mismatch: 0, identity: 1.0

cagctagtggctatgcggagttacttatcc	CRISPR spacer
cagctagtggctatgcggagttacttatcc	Protospacer
******************************

2. spacer 2.4|1131155|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448681 (Streptococcus phage Javan141, complete genome) position: , mismatch: 0, identity: 1.0

acaatagtccgaccttgcgcatatctttgc	CRISPR spacer
acaatagtccgaccttgcgcatatctttgc	Protospacer
******************************

3. spacer 2.4|1131155|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448672 (Streptococcus phage Javan117, complete genome) position: , mismatch: 0, identity: 1.0

acaatagtccgaccttgcgcatatctttgc	CRISPR spacer
acaatagtccgaccttgcgcatatctttgc	Protospacer
******************************

4. spacer 2.4|1131155|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448849 (Streptococcus phage Javan128, complete genome) position: , mismatch: 0, identity: 1.0

acaatagtccgaccttgcgcatatctttgc	CRISPR spacer
acaatagtccgaccttgcgcatatctttgc	Protospacer
******************************

5. spacer 2.4|1131155|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448683 (Streptococcus phage Javan149, complete genome) position: , mismatch: 0, identity: 1.0

acaatagtccgaccttgcgcatatctttgc	CRISPR spacer
acaatagtccgaccttgcgcatatctttgc	Protospacer
******************************

6. spacer 2.5|1131221|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044104 (Streptococcus dysgalactiae strain FDAARGOS_654 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

agtgaccccgtcgttaaccgtgttgttgta	CRISPR spacer
agtgaccccgtcgttaaccgtgttgttgta	Protospacer
******************************

7. spacer 2.5|1131221|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KJ951051 (Streptococcus dysgalactiae subsp. equisimilis strain G279 plasmid pG279, complete sequence) position: , mismatch: 0, identity: 1.0

agtgaccccgtcgttaaccgtgttgttgta	CRISPR spacer
agtgaccccgtcgttaaccgtgttgttgta	Protospacer
******************************

8. spacer 2.6|1131287|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK449012 (Streptococcus phage Javan94, complete genome) position: , mismatch: 0, identity: 1.0

ttggtattcgtggggtgcttgaatgagcaa	CRISPR spacer
ttggtattcgtggggtgcttgaatgagcaa	Protospacer
******************************

9. spacer 2.6|1131287|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448775 (Streptococcus phage Javan489, complete genome) position: , mismatch: 0, identity: 1.0

ttggtattcgtggggtgcttgaatgagcaa	CRISPR spacer
ttggtattcgtggggtgcttgaatgagcaa	Protospacer
******************************

10. spacer 2.6|1131287|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448794 (Streptococcus phage Javan525, complete genome) position: , mismatch: 0, identity: 1.0

ttggtattcgtggggtgcttgaatgagcaa	CRISPR spacer
ttggtattcgtggggtgcttgaatgagcaa	Protospacer
******************************

11. spacer 2.6|1131287|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448944 (Streptococcus phage Javan452, complete genome) position: , mismatch: 0, identity: 1.0

ttggtattcgtggggtgcttgaatgagcaa	CRISPR spacer
ttggtattcgtggggtgcttgaatgagcaa	Protospacer
******************************

12. spacer 2.6|1131287|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448672 (Streptococcus phage Javan117, complete genome) position: , mismatch: 0, identity: 1.0

ttggtattcgtggggtgcttgaatgagcaa	CRISPR spacer
ttggtattcgtggggtgcttgaatgagcaa	Protospacer
******************************

13. spacer 2.6|1131287|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448849 (Streptococcus phage Javan128, complete genome) position: , mismatch: 0, identity: 1.0

ttggtattcgtggggtgcttgaatgagcaa	CRISPR spacer
ttggtattcgtggggtgcttgaatgagcaa	Protospacer
******************************

14. spacer 2.6|1131287|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448958 (Streptococcus phage Javan486, complete genome) position: , mismatch: 0, identity: 1.0

ttggtattcgtggggtgcttgaatgagcaa	CRISPR spacer
ttggtattcgtggggtgcttgaatgagcaa	Protospacer
******************************

15. spacer 2.6|1131287|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448850 (Streptococcus phage Javan132, complete genome) position: , mismatch: 0, identity: 1.0

ttggtattcgtggggtgcttgaatgagcaa	CRISPR spacer
ttggtattcgtggggtgcttgaatgagcaa	Protospacer
******************************

16. spacer 2.6|1131287|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448765 (Streptococcus phage Javan459, complete genome) position: , mismatch: 0, identity: 1.0

ttggtattcgtggggtgcttgaatgagcaa	CRISPR spacer
ttggtattcgtggggtgcttgaatgagcaa	Protospacer
******************************

17. spacer 2.6|1131287|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448673 (Streptococcus phage Javan119, complete genome) position: , mismatch: 0, identity: 1.0

ttggtattcgtggggtgcttgaatgagcaa	CRISPR spacer
ttggtattcgtggggtgcttgaatgagcaa	Protospacer
******************************

18. spacer 2.8|1131419|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448860 (Streptococcus phage Javan172, complete genome) position: , mismatch: 0, identity: 1.0

caagagcgagggcatttgtcttatctaatt	CRISPR spacer
caagagcgagggcatttgtcttatctaatt	Protospacer
******************************

19. spacer 2.9|1131485|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448848 (Streptococcus phage Javan126, complete genome) position: , mismatch: 0, identity: 1.0

tttacacgttttagaaattgcctatcgtac	CRISPR spacer
tttacacgttttagaaattgcctatcgtac	Protospacer
******************************

20. spacer 2.9|1131485|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448857 (Streptococcus phage Javan164, complete genome) position: , mismatch: 0, identity: 1.0

tttacacgttttagaaattgcctatcgtac	CRISPR spacer
tttacacgttttagaaattgcctatcgtac	Protospacer
******************************

21. spacer 2.9|1131485|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448677 (Streptococcus phage Javan133, complete genome) position: , mismatch: 0, identity: 1.0

tttacacgttttagaaattgcctatcgtac	CRISPR spacer
tttacacgttttagaaattgcctatcgtac	Protospacer
******************************

22. spacer 2.10|1131551|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448858 (Streptococcus phage Javan166, complete genome) position: , mismatch: 0, identity: 1.0

acaccaacggtcgttttcccagcggcagtt	CRISPR spacer
acaccaacggtcgttttcccagcggcagtt	Protospacer
******************************

23. spacer 2.10|1131551|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448854 (Streptococcus phage Javan146, complete genome) position: , mismatch: 0, identity: 1.0

acaccaacggtcgttttcccagcggcagtt	CRISPR spacer
acaccaacggtcgttttcccagcggcagtt	Protospacer
******************************

24. spacer 2.11|1131617|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448860 (Streptococcus phage Javan172, complete genome) position: , mismatch: 0, identity: 1.0

aaattccagtcatataattgctatgctcgt	CRISPR spacer
aaattccagtcatataattgctatgctcgt	Protospacer
******************************

25. spacer 2.11|1131617|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448784 (Streptococcus phage Javan505, complete genome) position: , mismatch: 0, identity: 1.0

aaattccagtcatataattgctatgctcgt	CRISPR spacer
aaattccagtcatataattgctatgctcgt	Protospacer
******************************

26. spacer 2.11|1131617|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448947 (Streptococcus phage Javan458, complete genome) position: , mismatch: 0, identity: 1.0

aaattccagtcatataattgctatgctcgt	CRISPR spacer
aaattccagtcatataattgctatgctcgt	Protospacer
******************************

27. spacer 2.11|1131617|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448965 (Streptococcus phage Javan506, complete genome) position: , mismatch: 0, identity: 1.0

aaattccagtcatataattgctatgctcgt	CRISPR spacer
aaattccagtcatataattgctatgctcgt	Protospacer
******************************

28. spacer 2.11|1131617|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448859 (Streptococcus phage Javan170, complete genome) position: , mismatch: 0, identity: 1.0

aaattccagtcatataattgctatgctcgt	CRISPR spacer
aaattccagtcatataattgctatgctcgt	Protospacer
******************************

29. spacer 2.11|1131617|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448679 (Streptococcus phage Javan137, complete genome) position: , mismatch: 0, identity: 1.0

aaattccagtcatataattgctatgctcgt	CRISPR spacer
aaattccagtcatataattgctatgctcgt	Protospacer
******************************

30. spacer 2.11|1131617|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448689 (Streptococcus phage Javan163, complete genome) position: , mismatch: 0, identity: 1.0

aaattccagtcatataattgctatgctcgt	CRISPR spacer
aaattccagtcatataattgctatgctcgt	Protospacer
******************************

31. spacer 2.11|1131617|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448974 (Streptococcus phage Javan524, complete genome) position: , mismatch: 0, identity: 1.0

aaattccagtcatataattgctatgctcgt	CRISPR spacer
aaattccagtcatataattgctatgctcgt	Protospacer
******************************

32. spacer 2.11|1131617|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448688 (Streptococcus phage Javan161, complete genome) position: , mismatch: 0, identity: 1.0

aaattccagtcatataattgctatgctcgt	CRISPR spacer
aaattccagtcatataattgctatgctcgt	Protospacer
******************************

33. spacer 2.11|1131617|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448789 (Streptococcus phage Javan513, complete genome) position: , mismatch: 0, identity: 1.0

aaattccagtcatataattgctatgctcgt	CRISPR spacer
aaattccagtcatataattgctatgctcgt	Protospacer
******************************

34. spacer 2.12|1131683|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448672 (Streptococcus phage Javan117, complete genome) position: , mismatch: 0, identity: 1.0

gatgtaatcatgcgtgatacacgttcatct	CRISPR spacer
gatgtaatcatgcgtgatacacgttcatct	Protospacer
******************************

35. spacer 2.12|1131683|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448849 (Streptococcus phage Javan128, complete genome) position: , mismatch: 0, identity: 1.0

gatgtaatcatgcgtgatacacgttcatct	CRISPR spacer
gatgtaatcatgcgtgatacacgttcatct	Protospacer
******************************

36. spacer 2.13|1131749|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448672 (Streptococcus phage Javan117, complete genome) position: , mismatch: 0, identity: 1.0

gatgtaatcatgcgtgatacacgttcatct	CRISPR spacer
gatgtaatcatgcgtgatacacgttcatct	Protospacer
******************************

37. spacer 2.13|1131749|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448849 (Streptococcus phage Javan128, complete genome) position: , mismatch: 0, identity: 1.0

gatgtaatcatgcgtgatacacgttcatct	CRISPR spacer
gatgtaatcatgcgtgatacacgttcatct	Protospacer
******************************

38. spacer 2.14|1131815|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448681 (Streptococcus phage Javan141, complete genome) position: , mismatch: 0, identity: 1.0

agataggtaaaacccgctgccaaaaagact	CRISPR spacer
agataggtaaaacccgctgccaaaaagact	Protospacer
******************************

39. spacer 2.14|1131815|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448944 (Streptococcus phage Javan452, complete genome) position: , mismatch: 0, identity: 1.0

agataggtaaaacccgctgccaaaaagact	CRISPR spacer
agataggtaaaacccgctgccaaaaagact	Protospacer
******************************

40. spacer 2.14|1131815|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448690 (Streptococcus phage Javan169, complete genome) position: , mismatch: 0, identity: 1.0

agataggtaaaacccgctgccaaaaagact	CRISPR spacer
agataggtaaaacccgctgccaaaaagact	Protospacer
******************************

41. spacer 2.14|1131815|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448849 (Streptococcus phage Javan128, complete genome) position: , mismatch: 0, identity: 1.0

agataggtaaaacccgctgccaaaaagact	CRISPR spacer
agataggtaaaacccgctgccaaaaagact	Protospacer
******************************

42. spacer 2.14|1131815|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448854 (Streptococcus phage Javan146, complete genome) position: , mismatch: 0, identity: 1.0

agataggtaaaacccgctgccaaaaagact	CRISPR spacer
agataggtaaaacccgctgccaaaaagact	Protospacer
******************************

43. spacer 2.14|1131815|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448845 (Streptococcus phage Javan118, complete genome) position: , mismatch: 0, identity: 1.0

agataggtaaaacccgctgccaaaaagact	CRISPR spacer
agataggtaaaacccgctgccaaaaagact	Protospacer
******************************

44. spacer 2.16|1131947|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448848 (Streptococcus phage Javan126, complete genome) position: , mismatch: 0, identity: 1.0

tcaatacaagcatctgcggacgattgccta	CRISPR spacer
tcaatacaagcatctgcggacgattgccta	Protospacer
******************************

45. spacer 2.16|1131947|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448857 (Streptococcus phage Javan164, complete genome) position: , mismatch: 0, identity: 1.0

tcaatacaagcatctgcggacgattgccta	CRISPR spacer
tcaatacaagcatctgcggacgattgccta	Protospacer
******************************

46. spacer 2.16|1131947|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448677 (Streptococcus phage Javan133, complete genome) position: , mismatch: 0, identity: 1.0

tcaatacaagcatctgcggacgattgccta	CRISPR spacer
tcaatacaagcatctgcggacgattgccta	Protospacer
******************************

47. spacer 2.16|1131947|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448673 (Streptococcus phage Javan119, complete genome) position: , mismatch: 0, identity: 1.0

tcaatacaagcatctgcggacgattgccta	CRISPR spacer
tcaatacaagcatctgcggacgattgccta	Protospacer
******************************

48. spacer 3.3|1581442|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to MK448858 (Streptococcus phage Javan166, complete genome) position: , mismatch: 0, identity: 1.0

taaccaaaattacttaaattttgataagaatagc	CRISPR spacer
taaccaaaattacttaaattttgataagaatagc	Protospacer
**********************************

49. spacer 3.3|1581442|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to MK448848 (Streptococcus phage Javan126, complete genome) position: , mismatch: 0, identity: 1.0

taaccaaaattacttaaattttgataagaatagc	CRISPR spacer
taaccaaaattacttaaattttgataagaatagc	Protospacer
**********************************

50. spacer 3.3|1581442|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to MK448857 (Streptococcus phage Javan164, complete genome) position: , mismatch: 0, identity: 1.0

taaccaaaattacttaaattttgataagaatagc	CRISPR spacer
taaccaaaattacttaaattttgataagaatagc	Protospacer
**********************************

51. spacer 3.3|1581442|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to MK448677 (Streptococcus phage Javan133, complete genome) position: , mismatch: 0, identity: 1.0

taaccaaaattacttaaattttgataagaatagc	CRISPR spacer
taaccaaaattacttaaattttgataagaatagc	Protospacer
**********************************

52. spacer 3.3|1581442|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to MK448859 (Streptococcus phage Javan170, complete genome) position: , mismatch: 0, identity: 1.0

taaccaaaattacttaaattttgataagaatagc	CRISPR spacer
taaccaaaattacttaaattttgataagaatagc	Protospacer
**********************************

53. spacer 3.3|1581442|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to MK448690 (Streptococcus phage Javan169, complete genome) position: , mismatch: 0, identity: 1.0

taaccaaaattacttaaattttgataagaatagc	CRISPR spacer
taaccaaaattacttaaattttgataagaatagc	Protospacer
**********************************

54. spacer 3.3|1581442|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to MK448682 (Streptococcus phage Javan143, complete genome) position: , mismatch: 0, identity: 1.0

taaccaaaattacttaaattttgataagaatagc	CRISPR spacer
taaccaaaattacttaaattttgataagaatagc	Protospacer
**********************************

55. spacer 3.3|1581442|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to MK448688 (Streptococcus phage Javan161, complete genome) position: , mismatch: 0, identity: 1.0

taaccaaaattacttaaattttgataagaatagc	CRISPR spacer
taaccaaaattacttaaattttgataagaatagc	Protospacer
**********************************

56. spacer 3.4|1581508|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to MK448681 (Streptococcus phage Javan141, complete genome) position: , mismatch: 0, identity: 1.0

agtaaatgtaactggttgtgtacctgttagggta	CRISPR spacer
agtaaatgtaactggttgtgtacctgttagggta	Protospacer
**********************************

57. spacer 3.4|1581508|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to MK448672 (Streptococcus phage Javan117, complete genome) position: , mismatch: 0, identity: 1.0

agtaaatgtaactggttgtgtacctgttagggta	CRISPR spacer
agtaaatgtaactggttgtgtacctgttagggta	Protospacer
**********************************

58. spacer 3.4|1581508|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to MK448849 (Streptococcus phage Javan128, complete genome) position: , mismatch: 0, identity: 1.0

agtaaatgtaactggttgtgtacctgttagggta	CRISPR spacer
agtaaatgtaactggttgtgtacctgttagggta	Protospacer
**********************************

59. spacer 3.4|1581508|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to MK448856 (Streptococcus phage Javan158, complete genome) position: , mismatch: 0, identity: 1.0

agtaaatgtaactggttgtgtacctgttagggta	CRISPR spacer
agtaaatgtaactggttgtgtacctgttagggta	Protospacer
**********************************

60. spacer 3.7|1581706|33|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to MK448672 (Streptococcus phage Javan117, complete genome) position: , mismatch: 0, identity: 1.0

tcattggaagcacgaaccttgcctttatggatg	CRISPR spacer
tcattggaagcacgaaccttgcctttatggatg	Protospacer
*********************************

61. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to MK448672 (Streptococcus phage Javan117, complete genome) position: , mismatch: 0, identity: 1.0

agcaaaaaacaatgccaaaaagatgaatgagatt	CRISPR spacer
agcaaaaaacaatgccaaaaagatgaatgagatt	Protospacer
**********************************

62. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to MK448849 (Streptococcus phage Javan128, complete genome) position: , mismatch: 0, identity: 1.0

agcaaaaaacaatgccaaaaagatgaatgagatt	CRISPR spacer
agcaaaaaacaatgccaaaaagatgaatgagatt	Protospacer
**********************************

63. spacer 3.11|1581969|33|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to MK448973 (Streptococcus phage Javan522, complete genome) position: , mismatch: 0, identity: 1.0

taaaagaaaatatcgacacttcttcagcaatgg	CRISPR spacer
taaaagaaaatatcgacacttcttcagcaatgg	Protospacer
*********************************

64. spacer 3.11|1581969|33|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to MK448965 (Streptococcus phage Javan506, complete genome) position: , mismatch: 0, identity: 1.0

taaaagaaaatatcgacacttcttcagcaatgg	CRISPR spacer
taaaagaaaatatcgacacttcttcagcaatgg	Protospacer
*********************************

65. spacer 3.11|1581969|33|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to MK448959 (Streptococcus phage Javan488, complete genome) position: , mismatch: 0, identity: 1.0

taaaagaaaatatcgacacttcttcagcaatgg	CRISPR spacer
taaaagaaaatatcgacacttcttcagcaatgg	Protospacer
*********************************

66. spacer 3.11|1581969|33|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to MK448672 (Streptococcus phage Javan117, complete genome) position: , mismatch: 0, identity: 1.0

taaaagaaaatatcgacacttcttcagcaatgg	CRISPR spacer
taaaagaaaatatcgacacttcttcagcaatgg	Protospacer
*********************************

67. spacer 3.11|1581969|33|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to MK448849 (Streptococcus phage Javan128, complete genome) position: , mismatch: 0, identity: 1.0

taaaagaaaatatcgacacttcttcagcaatgg	CRISPR spacer
taaaagaaaatatcgacacttcttcagcaatgg	Protospacer
*********************************

68. spacer 3.11|1581969|33|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to MK448778 (Streptococcus phage Javan493, complete genome) position: , mismatch: 0, identity: 1.0

taaaagaaaatatcgacacttcttcagcaatgg	CRISPR spacer
taaaagaaaatatcgacacttcttcagcaatgg	Protospacer
*********************************

69. spacer 3.11|1581969|33|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to MK448949 (Streptococcus phage Javan460, complete genome) position: , mismatch: 0, identity: 1.0

taaaagaaaatatcgacacttcttcagcaatgg	CRISPR spacer
taaaagaaaatatcgacacttcttcagcaatgg	Protospacer
*********************************

70. spacer 3.11|1581969|33|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to MK448975 (Streptococcus phage Javan526, complete genome) position: , mismatch: 0, identity: 1.0

taaaagaaaatatcgacacttcttcagcaatgg	CRISPR spacer
taaaagaaaatatcgacacttcttcagcaatgg	Protospacer
*********************************

71. spacer 3.11|1581969|33|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to MK448782 (Streptococcus phage Javan501, complete genome) position: , mismatch: 0, identity: 1.0

taaaagaaaatatcgacacttcttcagcaatgg	CRISPR spacer
taaaagaaaatatcgacacttcttcagcaatgg	Protospacer
*********************************

72. spacer 2.4|1131155|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448856 (Streptococcus phage Javan158, complete genome) position: , mismatch: 1, identity: 0.967

acaatagtccgaccttgcgcatatctttgc	CRISPR spacer
acaatagtccgaccttgagcatatctttgc	Protospacer
***************** ************

73. spacer 2.6|1131287|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448862 (Streptococcus phage Javan178, complete genome) position: , mismatch: 1, identity: 0.967

ttggtattcgtggggtgcttgaatgagcaa	CRISPR spacer
ttggcattcgtggggtgcttgaatgagcaa	Protospacer
****.*************************

74. spacer 2.6|1131287|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK449010 (Streptococcus phage Javan90, complete genome) position: , mismatch: 1, identity: 0.967

ttggtattcgtggggtgcttgaatgagcaa	CRISPR spacer
ttggcattcgtggggtgcttgaatgagcaa	Protospacer
****.*************************

75. spacer 2.6|1131287|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448681 (Streptococcus phage Javan141, complete genome) position: , mismatch: 1, identity: 0.967

ttggtattcgtggggtgcttgaatgagcaa	CRISPR spacer
ttggtattcgtggggtgcttgaatgagtaa	Protospacer
***************************.**

76. spacer 2.6|1131287|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448845 (Streptococcus phage Javan118, complete genome) position: , mismatch: 1, identity: 0.967

ttggtattcgtggggtgcttgaatgagcaa	CRISPR spacer
ttggcattcgtggggtgcttgaatgagcaa	Protospacer
****.*************************

77. spacer 2.6|1131287|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448833 (Streptococcus phage Javan87, complete genome) position: , mismatch: 1, identity: 0.967

ttggtattcgtggggtgcttgaatgagcaa	CRISPR spacer
ttggcattcgtggggtgcttgaatgagcaa	Protospacer
****.*************************

78. spacer 2.7|1131353|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448672 (Streptococcus phage Javan117, complete genome) position: , mismatch: 1, identity: 0.967

tagattttttatactcgctctctgagtatg	CRISPR spacer
tagattttttatactcgctctccgagtatg	Protospacer
**********************.*******

79. spacer 2.7|1131353|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448849 (Streptococcus phage Javan128, complete genome) position: , mismatch: 1, identity: 0.967

tagattttttatactcgctctctgagtatg	CRISPR spacer
tagattttttatactcgctctccgagtatg	Protospacer
**********************.*******

80. spacer 2.11|1131617|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448769 (Streptococcus phage Javan471, complete genome) position: , mismatch: 1, identity: 0.967

aaattccagtcatataattgctatgctcgt	CRISPR spacer
aaattccagacatataattgctatgctcgt	Protospacer
********* ********************

81. spacer 2.11|1131617|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448684 (Streptococcus phage Javan151, complete genome) position: , mismatch: 1, identity: 0.967

aaattccagtcatataattgctatgctcgt	CRISPR spacer
aaattccagacatataattgctatgctcgt	Protospacer
********* ********************

82. spacer 2.15|1131881|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448672 (Streptococcus phage Javan117, complete genome) position: , mismatch: 1, identity: 0.967

atagttttacgtgtttttaagttttgagtt	CRISPR spacer
atggttttacgtgtttttaagttttgagtt	Protospacer
**.***************************

83. spacer 2.15|1131881|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448849 (Streptococcus phage Javan128, complete genome) position: , mismatch: 1, identity: 0.967

atagttttacgtgtttttaagttttgagtt	CRISPR spacer
atagttttacgcgtttttaagttttgagtt	Protospacer
***********.******************

84. spacer 2.16|1131947|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448946 (Streptococcus phage Javan456, complete genome) position: , mismatch: 1, identity: 0.967

tcaatacaagcatctgcggacgattgccta	CRISPR spacer
tcaagacaagcatctgcggacgattgccta	Protospacer
**** *************************

85. spacer 2.16|1131947|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448858 (Streptococcus phage Javan166, complete genome) position: , mismatch: 1, identity: 0.967

tcaatacaagcatctgcggacgattgccta	CRISPR spacer
tcaatacaagcatctgcggatgattgccta	Protospacer
********************.*********

86. spacer 2.16|1131947|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448860 (Streptococcus phage Javan172, complete genome) position: , mismatch: 1, identity: 0.967

tcaatacaagcatctgcggacgattgccta	CRISPR spacer
tcaatacaggcatctgcggacgattgccta	Protospacer
********.*********************

87. spacer 2.16|1131947|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448775 (Streptococcus phage Javan489, complete genome) position: , mismatch: 1, identity: 0.967

tcaatacaagcatctgcggacgattgccta	CRISPR spacer
tcaatacaagcatctgcggacgattgtcta	Protospacer
**************************.***

88. spacer 2.16|1131947|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448794 (Streptococcus phage Javan525, complete genome) position: , mismatch: 1, identity: 0.967

tcaatacaagcatctgcggacgattgccta	CRISPR spacer
tcaatacaagcatctgcggacgattgtcta	Protospacer
**************************.***

89. spacer 2.16|1131947|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448970 (Streptococcus phage Javan516, complete genome) position: , mismatch: 1, identity: 0.967

tcaatacaagcatctgcggacgattgccta	CRISPR spacer
tcaatacaagcatctgcggacgattgtcta	Protospacer
**************************.***

90. spacer 2.16|1131947|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448795 (Streptococcus phage Javan527, complete genome) position: , mismatch: 1, identity: 0.967

tcaatacaagcatctgcggacgattgccta	CRISPR spacer
tcaagacaagcatctgcggacgattgccta	Protospacer
**** *************************

91. spacer 2.16|1131947|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448953 (Streptococcus phage Javan474, complete genome) position: , mismatch: 1, identity: 0.967

tcaatacaagcatctgcggacgattgccta	CRISPR spacer
tcaatacaagcatctgcggacgattgtcta	Protospacer
**************************.***

92. spacer 2.16|1131947|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448944 (Streptococcus phage Javan452, complete genome) position: , mismatch: 1, identity: 0.967

tcaatacaagcatctgcggacgattgccta	CRISPR spacer
tcaatacaagcatctgcggacgattgtcta	Protospacer
**************************.***

93. spacer 2.16|1131947|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448679 (Streptococcus phage Javan137, complete genome) position: , mismatch: 1, identity: 0.967

tcaatacaagcatctgcggacgattgccta	CRISPR spacer
tcaatacaagcatctgcggatgattgccta	Protospacer
********************.*********

94. spacer 2.16|1131947|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448864 (Streptococcus phage Javan180, complete genome) position: , mismatch: 1, identity: 0.967

tcaatacaagcatctgcggacgattgccta	CRISPR spacer
tcaatacaagcatctgcggacgattgtcta	Protospacer
**************************.***

95. spacer 2.16|1131947|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448682 (Streptococcus phage Javan143, complete genome) position: , mismatch: 1, identity: 0.967

tcaatacaagcatctgcggacgattgccta	CRISPR spacer
tcaatacaagcatctgcggatgattgccta	Protospacer
********************.*********

96. spacer 2.16|1131947|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448765 (Streptococcus phage Javan459, complete genome) position: , mismatch: 1, identity: 0.967

tcaatacaagcatctgcggacgattgccta	CRISPR spacer
tcaatacaagcatctgcggacgattgtcta	Protospacer
**************************.***

97. spacer 2.16|1131947|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448957 (Streptococcus phage Javan484, complete genome) position: , mismatch: 1, identity: 0.967

tcaatacaagcatctgcggacgattgccta	CRISPR spacer
tcaatacaagcatctgcggacgattgtcta	Protospacer
**************************.***

98. spacer 3.14|1582166|35|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to MK448767 (Streptococcus phage Javan467, complete genome) position: , mismatch: 1, identity: 0.971

tctagttctaagtcctgttctgccctcaaagtatt	CRISPR spacer
tctagttctaagtcctgttctgccttcaaagtatt	Protospacer
************************.**********

99. spacer 3.14|1582166|35|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to MK448771 (Streptococcus phage Javan481, complete genome) position: , mismatch: 1, identity: 0.971

tctagttctaagtcctgttctgccctcaaagtatt	CRISPR spacer
tctagttctaagtcctgttctgccttcaaagtatt	Protospacer
************************.**********

100. spacer 3.14|1582166|35|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to MK448942 (Streptococcus phage Javan448, complete genome) position: , mismatch: 1, identity: 0.971

tctagttctaagtcctgttctgccctcaaagtatt	CRISPR spacer
tctagttctaagtcctgttctgccttcaaagtatt	Protospacer
************************.**********

101. spacer 3.14|1582166|35|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to NC_004586 (Streptococcus pyogenes phage 315.3, complete genome) position: , mismatch: 1, identity: 0.971

tctagttctaagtcctgttctgccctcaaagtatt	CRISPR spacer
tctagttctaagtcctgttctgccttcaaagtatt	Protospacer
************************.**********

102. spacer 3.14|1582166|35|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to MK448681 (Streptococcus phage Javan141, complete genome) position: , mismatch: 1, identity: 0.971

tctagttctaagtcctgttctgccctcaaagtatt	CRISPR spacer
tctagttctaagtcctgttctgccttcaaagtatt	Protospacer
************************.**********

103. spacer 3.14|1582166|35|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to MK448964 (Streptococcus phage Javan502, complete genome) position: , mismatch: 1, identity: 0.971

tctagttctaagtcctgttctgccctcaaagtatt	CRISPR spacer
tctagttctaagtcctgttctgccttcaaagtatt	Protospacer
************************.**********

104. spacer 3.14|1582166|35|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to MK448943 (Streptococcus phage Javan450, complete genome) position: , mismatch: 1, identity: 0.971

tctagttctaagtcctgttctgccctcaaagtatt	CRISPR spacer
tctagttctaagtcctgttctgccttcaaagtatt	Protospacer
************************.**********

105. spacer 3.14|1582166|35|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to MK448972 (Streptococcus phage Javan520, complete genome) position: , mismatch: 1, identity: 0.971

tctagttctaagtcctgttctgccctcaaagtatt	CRISPR spacer
tctagttctaagtcctgttctgccttcaaagtatt	Protospacer
************************.**********

106. spacer 3.14|1582166|35|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to MK448786 (Streptococcus phage Javan509, complete genome) position: , mismatch: 1, identity: 0.971

tctagttctaagtcctgttctgccctcaaagtatt	CRISPR spacer
tctagttctaagtcctgttctgccttcaaagtatt	Protospacer
************************.**********

107. spacer 3.14|1582166|35|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to MK448774 (Streptococcus phage Javan487, complete genome) position: , mismatch: 1, identity: 0.971

tctagttctaagtcctgttctgccctcaaagtatt	CRISPR spacer
tctagttctaagtcctgttctgccttcaaagtatt	Protospacer
************************.**********

108. spacer 3.14|1582166|35|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to MK448777 (Streptococcus phage Javan491, complete genome) position: , mismatch: 1, identity: 0.971

tctagttctaagtcctgttctgccctcaaagtatt	CRISPR spacer
tctagttctaagtcctgttctgccttcaaagtatt	Protospacer
************************.**********

109. spacer 2.3|1131089|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448946 (Streptococcus phage Javan456, complete genome) position: , mismatch: 2, identity: 0.933

cagctagtggctatgcggagttacttatcc	CRISPR spacer
cagcgagtggctatgcggagctacttatcc	Protospacer
**** ***************.*********

110. spacer 2.3|1131089|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to NC_004585 (Streptococcus prophage 315.2, complete genome) position: , mismatch: 2, identity: 0.933

cagctagtggctatgcggagttacttatcc	CRISPR spacer
cagcaagtggctatgcggagctacttatcc	Protospacer
**** ***************.*********

111. spacer 2.3|1131089|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448966 (Streptococcus phage Javan508, complete genome) position: , mismatch: 2, identity: 0.933

cagctagtggctatgcggagttacttatcc	CRISPR spacer
cagcaagtggctatgcggagctacttatcc	Protospacer
**** ***************.*********

112. spacer 2.3|1131089|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448795 (Streptococcus phage Javan527, complete genome) position: , mismatch: 2, identity: 0.933

cagctagtggctatgcggagttacttatcc	CRISPR spacer
cagcgagtggctatgcggagctacttatcc	Protospacer
**** ***************.*********

113. spacer 2.3|1131089|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to NC_004584 (Streptococcus prophage 315.1, complete genome) position: , mismatch: 2, identity: 0.933

cagctagtggctatgcggagttacttatcc	CRISPR spacer
cagcaagtggctatgcggagctacttatcc	Protospacer
**** ***************.*********

114. spacer 2.3|1131089|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448772 (Streptococcus phage Javan483, complete genome) position: , mismatch: 2, identity: 0.933

cagctagtggctatgcggagttacttatcc	CRISPR spacer
cagcaagtggctatgcggagctacttatcc	Protospacer
**** ***************.*********

115. spacer 2.3|1131089|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448941 (Streptococcus phage Javan446, complete genome) position: , mismatch: 2, identity: 0.933

cagctagtggctatgcggagttacttatcc	CRISPR spacer
cagcgagtggctatgcggagctacttatcc	Protospacer
**** ***************.*********

116. spacer 2.3|1131089|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448962 (Streptococcus phage Javan496, complete genome) position: , mismatch: 2, identity: 0.933

cagctagtggctatgcggagttacttatcc	CRISPR spacer
cagcgagtggctatgcggagctacttatcc	Protospacer
**** ***************.*********

117. spacer 2.3|1131089|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448978 (Streptococcus phage Javan532, complete genome) position: , mismatch: 2, identity: 0.933

cagctagtggctatgcggagttacttatcc	CRISPR spacer
cagcaagtggctatgcggagctacttatcc	Protospacer
**** ***************.*********

118. spacer 2.3|1131089|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448785 (Streptococcus phage Javan507, complete genome) position: , mismatch: 2, identity: 0.933

cagctagtggctatgcggagttacttatcc	CRISPR spacer
cagcaagtggctatgcggagctacttatcc	Protospacer
**** ***************.*********

119. spacer 2.4|1131155|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448798 (Streptococcus phage Javan533, complete genome) position: , mismatch: 2, identity: 0.933

acaatagtccgaccttgcgcatatctttgc	CRISPR spacer
acaatagtcctaccttgtgcatatctttgc	Protospacer
********** ******.************

120. spacer 2.4|1131155|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to NC_028700 (Streptococcus phage T12, complete genome) position: , mismatch: 2, identity: 0.933

acaatagtccgaccttgcgcatatctttgc	CRISPR spacer
acaatagtcctaccttgtgcatatctttgc	Protospacer
********** ******.************

121. spacer 2.4|1131155|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448790 (Streptococcus phage Javan515, complete genome) position: , mismatch: 2, identity: 0.933

acaatagtccgaccttgcgcatatctttgc	CRISPR spacer
acaatagtcctaccttgtgcatatctttgc	Protospacer
********** ******.************

122. spacer 2.4|1131155|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448783 (Streptococcus phage Javan503, complete genome) position: , mismatch: 2, identity: 0.933

acaatagtccgaccttgcgcatatctttgc	CRISPR spacer
acaatagtcctaccttgtgcatatctttgc	Protospacer
********** ******.************

123. spacer 2.4|1131155|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448967 (Streptococcus phage Javan510, complete genome) position: , mismatch: 2, identity: 0.933

acaatagtccgaccttgcgcatatctttgc	CRISPR spacer
acaatagtcctaccttgtgcatatctttgc	Protospacer
********** ******.************

124. spacer 2.4|1131155|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to NC_004588 (Streptococcus prophage 315.5, complete genome) position: , mismatch: 2, identity: 0.933

acaatagtccgaccttgcgcatatctttgc	CRISPR spacer
acaatagtcctaccttgtgcatatctttgc	Protospacer
********** ******.************

125. spacer 2.6|1131287|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448675 (Streptococcus phage Javan129, complete genome) position: , mismatch: 2, identity: 0.933

ttggtattcgtggggtgcttgaatgagcaa	CRISPR spacer
ttggcattcgcggggtgcttgaatgagcaa	Protospacer
****.*****.*******************

126. spacer 2.6|1131287|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448771 (Streptococcus phage Javan481, complete genome) position: , mismatch: 2, identity: 0.933

ttggtattcgtggggtgcttgaatgagcaa	CRISPR spacer
ttggcattcgcggggtgcttgaatgagcaa	Protospacer
****.*****.*******************

127. spacer 2.6|1131287|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448973 (Streptococcus phage Javan522, complete genome) position: , mismatch: 2, identity: 0.933

ttggtattcgtggggtgcttgaatgagcaa	CRISPR spacer
ttggcattcgcggggtgcttgaatgagcaa	Protospacer
****.*****.*******************

128. spacer 2.6|1131287|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448969 (Streptococcus phage Javan514, complete genome) position: , mismatch: 2, identity: 0.933

ttggtattcgtggggtgcttgaatgagcaa	CRISPR spacer
ttggcattcgcggggtgcttgaatgagcaa	Protospacer
****.*****.*******************

129. spacer 2.6|1131287|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448972 (Streptococcus phage Javan520, complete genome) position: , mismatch: 2, identity: 0.933

ttggtattcgtggggtgcttgaatgagcaa	CRISPR spacer
ttggcattcgcggggtgcttgaatgagcaa	Protospacer
****.*****.*******************

130. spacer 2.6|1131287|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448763 (Streptococcus phage Javan451, complete genome) position: , mismatch: 2, identity: 0.933

ttggtattcgtggggtgcttgaatgagcaa	CRISPR spacer
ttggcattcgcggggtgcttgaatgagcaa	Protospacer
****.*****.*******************

131. spacer 2.6|1131287|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448774 (Streptococcus phage Javan487, complete genome) position: , mismatch: 2, identity: 0.933

ttggtattcgtggggtgcttgaatgagcaa	CRISPR spacer
ttggcattcgcggggtgcttgaatgagcaa	Protospacer
****.*****.*******************

132. spacer 2.6|1131287|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448778 (Streptococcus phage Javan493, complete genome) position: , mismatch: 2, identity: 0.933

ttggtattcgtggggtgcttgaatgagcaa	CRISPR spacer
ttggcattcgcggggtgcttgaatgagcaa	Protospacer
****.*****.*******************

133. spacer 2.6|1131287|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448773 (Streptococcus phage Javan485, complete genome) position: , mismatch: 2, identity: 0.933

ttggtattcgtggggtgcttgaatgagcaa	CRISPR spacer
ttggcattcgcggggtgcttgaatgagcaa	Protospacer
****.*****.*******************

134. spacer 2.6|1131287|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448777 (Streptococcus phage Javan491, complete genome) position: , mismatch: 2, identity: 0.933

ttggtattcgtggggtgcttgaatgagcaa	CRISPR spacer
ttggcattcgcggggtgcttgaatgagcaa	Protospacer
****.*****.*******************

135. spacer 2.8|1131419|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448960 (Streptococcus phage Javan492, complete genome) position: , mismatch: 2, identity: 0.933

caagagcgagggcatttgtcttatctaatt	CRISPR spacer
aaaaagcgagggcatttgtcttatctaatt	Protospacer
 **.**************************

136. spacer 2.8|1131419|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448762 (Streptococcus phage Javan447, complete genome) position: , mismatch: 2, identity: 0.933

caagagcgagggcatttgtcttatctaatt	CRISPR spacer
aaaaagcgagggcatttgtcttatctaatt	Protospacer
 **.**************************

137. spacer 2.8|1131419|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448795 (Streptococcus phage Javan527, complete genome) position: , mismatch: 2, identity: 0.933

caagagcgagggcatttgtcttatctaatt	CRISPR spacer
aaaaagcgagggcatttgtcttatctaatt	Protospacer
 **.**************************

138. spacer 2.8|1131419|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448791 (Streptococcus phage Javan517, complete genome) position: , mismatch: 2, identity: 0.933

caagagcgagggcatttgtcttatctaatt	CRISPR spacer
aaaaagcgagggcatttgtcttatctaatt	Protospacer
 **.**************************

139. spacer 2.8|1131419|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to NC_004587 (Streptococcus prophage 315.4, complete genome) position: , mismatch: 2, identity: 0.933

caagagcgagggcatttgtcttatctaatt	CRISPR spacer
aaaaagcgagggcatttgtcttatctaatt	Protospacer
 **.**************************

140. spacer 2.8|1131419|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to NC_003157 (Streptococcus pyogenes strain NIH1 putative methionine sulfoxide reductase gene, complete cds; and integrated temperate phage PhiNIH1.1, complete genome) position: , mismatch: 2, identity: 0.933

caagagcgagggcatttgtcttatctaatt	CRISPR spacer
aaaaagcgagggcatttgtcttatctaatt	Protospacer
 **.**************************

141. spacer 2.8|1131419|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448941 (Streptococcus phage Javan446, complete genome) position: , mismatch: 2, identity: 0.933

caagagcgagggcatttgtcttatctaatt	CRISPR spacer
aaaaagcgagggcatttgtcttatctaatt	Protospacer
 **.**************************

142. spacer 2.8|1131419|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448977 (Streptococcus phage Javan530, complete genome) position: , mismatch: 2, identity: 0.933

caagagcgagggcatttgtcttatctaatt	CRISPR spacer
aaaaagcgagggcatttgtcttatctaatt	Protospacer
 **.**************************

143. spacer 2.8|1131419|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448958 (Streptococcus phage Javan486, complete genome) position: , mismatch: 2, identity: 0.933

caagagcgagggcatttgtcttatctaatt	CRISPR spacer
aaaaagcgagggcatttgtcttatctaatt	Protospacer
 **.**************************

144. spacer 2.8|1131419|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448788 (Streptococcus phage Javan511, complete genome) position: , mismatch: 2, identity: 0.933

caagagcgagggcatttgtcttatctaatt	CRISPR spacer
aaaaagcgagggcatttgtcttatctaatt	Protospacer
 **.**************************

145. spacer 2.8|1131419|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448954 (Streptococcus phage Javan476, complete genome) position: , mismatch: 2, identity: 0.933

caagagcgagggcatttgtcttatctaatt	CRISPR spacer
aaaaagcgagggcatttgtcttatctaatt	Protospacer
 **.**************************

146. spacer 2.8|1131419|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448950 (Streptococcus phage Javan464, complete genome) position: , mismatch: 2, identity: 0.933

caagagcgagggcatttgtcttatctaatt	CRISPR spacer
aaaaagcgagggcatttgtcttatctaatt	Protospacer
 **.**************************

147. spacer 2.8|1131419|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448957 (Streptococcus phage Javan484, complete genome) position: , mismatch: 2, identity: 0.933

caagagcgagggcatttgtcttatctaatt	CRISPR spacer
aaaaagcgagggcatttgtcttatctaatt	Protospacer
 **.**************************

148. spacer 2.8|1131419|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448865 (Streptococcus phage Javan182, complete genome) position: , mismatch: 2, identity: 0.933

caagagcgagggcatttgtcttatctaatt	CRISPR spacer
caaaagcgagggcgtttgtcttatctaatt	Protospacer
***.*********.****************

149. spacer 2.8|1131419|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448694 (Streptococcus phage Javan179, complete genome) position: , mismatch: 2, identity: 0.933

caagagcgagggcatttgtcttatctaatt	CRISPR spacer
caaaagcgagggcgtttgtcttatctaatt	Protospacer
***.*********.****************

150. spacer 2.9|1131485|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448680 (Streptococcus phage Javan139, complete genome) position: , mismatch: 2, identity: 0.933

tttacacgttttagaaattgcctatcgtac	CRISPR spacer
tttacacgtttcataaattgcctatcgtac	Protospacer
***********.* ****************

151. spacer 2.16|1131947|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448792 (Streptococcus phage Javan521, complete genome) position: , mismatch: 2, identity: 0.933

tcaatacaagcatctgcggacgattgccta	CRISPR spacer
gcaatgcaagcatctgcggacgattgccta	Protospacer
 ****.************************

152. spacer 2.16|1131947|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to NC_009018 (Streptococcus phage phi3396, complete genome) position: , mismatch: 2, identity: 0.933

tcaatacaagcatctgcggacgattgccta	CRISPR spacer
ttgatacaagcatctgcggacgattgccta	Protospacer
*..***************************

153. spacer 2.16|1131947|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to NC_004584 (Streptococcus prophage 315.1, complete genome) position: , mismatch: 2, identity: 0.933

tcaatacaagcatctgcggacgattgccta	CRISPR spacer
gcaatgcaagcatctgcggacgattgccta	Protospacer
 ****.************************

154. spacer 2.16|1131947|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448941 (Streptococcus phage Javan446, complete genome) position: , mismatch: 2, identity: 0.933

tcaatacaagcatctgcggacgattgccta	CRISPR spacer
gcaatgcaagcatctgcggacgattgccta	Protospacer
 ****.************************

155. spacer 2.16|1131947|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448770 (Streptococcus phage Javan477, complete genome) position: , mismatch: 2, identity: 0.933

tcaatacaagcatctgcggacgattgccta	CRISPR spacer
gcaatgcaagcatctgcggacgattgccta	Protospacer
 ****.************************

156. spacer 2.16|1131947|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448978 (Streptococcus phage Javan532, complete genome) position: , mismatch: 2, identity: 0.933

tcaatacaagcatctgcggacgattgccta	CRISPR spacer
gcaatgcaagcatctgcggacgattgccta	Protospacer
 ****.************************

157. spacer 2.16|1131947|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448785 (Streptococcus phage Javan507, complete genome) position: , mismatch: 2, identity: 0.933

tcaatacaagcatctgcggacgattgccta	CRISPR spacer
gcaatgcaagcatctgcggacgattgccta	Protospacer
 ****.************************

158. spacer 3.7|1581706|33|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to MK448960 (Streptococcus phage Javan492, complete genome) position: , mismatch: 2, identity: 0.939

tcattggaagcacgaaccttgcctttatggatg	CRISPR spacer
tcattggaagcacgaaccttgtctttatggctg	Protospacer
*********************.******** **

159. spacer 3.7|1581706|33|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to MK448762 (Streptococcus phage Javan447, complete genome) position: , mismatch: 2, identity: 0.939

tcattggaagcacgaaccttgcctttatggatg	CRISPR spacer
tcattggaagcacgaaccttgtctttatggctg	Protospacer
*********************.******** **

160. spacer 3.7|1581706|33|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to MK448965 (Streptococcus phage Javan506, complete genome) position: , mismatch: 2, identity: 0.939

tcattggaagcacgaaccttgcctttatggatg	CRISPR spacer
tcattggaagcacgaaccttgtctttatggctg	Protospacer
*********************.******** **

161. spacer 3.7|1581706|33|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to MK448959 (Streptococcus phage Javan488, complete genome) position: , mismatch: 2, identity: 0.939

tcattggaagcacgaaccttgcctttatggatg	CRISPR spacer
tcattggaagcacgaaccttgtctttatggctg	Protospacer
*********************.******** **

162. spacer 3.7|1581706|33|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to MK448849 (Streptococcus phage Javan128, complete genome) position: , mismatch: 2, identity: 0.939

tcattggaagcacgaaccttgcctttatggatg	CRISPR spacer
tcattggaagcacgaaccttgtctttatggctg	Protospacer
*********************.******** **

163. spacer 3.7|1581706|33|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to MK448949 (Streptococcus phage Javan460, complete genome) position: , mismatch: 2, identity: 0.939

tcattggaagcacgaaccttgcctttatggatg	CRISPR spacer
tcattggaagcacgaaccttgtctttatggctg	Protospacer
*********************.******** **

164. spacer 3.7|1581706|33|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to MK448958 (Streptococcus phage Javan486, complete genome) position: , mismatch: 2, identity: 0.939

tcattggaagcacgaaccttgcctttatggatg	CRISPR spacer
tcattggaagcacgaaccttgtctttatggctg	Protospacer
*********************.******** **

165. spacer 3.7|1581706|33|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to MK448954 (Streptococcus phage Javan476, complete genome) position: , mismatch: 2, identity: 0.939

tcattggaagcacgaaccttgcctttatggatg	CRISPR spacer
tcattggaagcacgaaccttgtctttatggctg	Protospacer
*********************.******** **

166. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to MK448965 (Streptococcus phage Javan506, complete genome) position: , mismatch: 2, identity: 0.941

agcaaaaaacaatgccaaaaagatgaatgagatt	CRISPR spacer
agcaaaaaacaatgcagaaaagatgaatgagatt	Protospacer
*************** .*****************

167. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to MK448959 (Streptococcus phage Javan488, complete genome) position: , mismatch: 2, identity: 0.941

agcaaaaaacaatgccaaaaagatgaatgagatt	CRISPR spacer
agcaaaaaacaatgcagaaaagatgaatgagatt	Protospacer
*************** .*****************

168. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to MK448949 (Streptococcus phage Javan460, complete genome) position: , mismatch: 2, identity: 0.941

agcaaaaaacaatgccaaaaagatgaatgagatt	CRISPR spacer
agcaaaaaacaatgcagaaaagatgaatgagatt	Protospacer
*************** .*****************

169. spacer 2.3|1131089|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448852 (Streptococcus phage Javan140, complete genome) position: , mismatch: 3, identity: 0.9

cagctagtggctatgcggagttacttatcc	CRISPR spacer
cggctagcggctatgcagagttacttatcc	Protospacer
*.*****.********.*************

170. spacer 2.3|1131089|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448973 (Streptococcus phage Javan522, complete genome) position: , mismatch: 3, identity: 0.9

cagctagtggctatgcggagttacttatcc	CRISPR spacer
ctgcgagtggctatgcggagctacttatcc	Protospacer
* ** ***************.*********

171. spacer 2.3|1131089|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448778 (Streptococcus phage Javan493, complete genome) position: , mismatch: 3, identity: 0.9

cagctagtggctatgcggagttacttatcc	CRISPR spacer
ctgcgagtggctatgcggagctacttatcc	Protospacer
* ** ***************.*********

172. spacer 2.3|1131089|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448686 (Streptococcus phage Javan157, complete genome) position: , mismatch: 3, identity: 0.9

cagctagtggctatgcggagttacttatcc	CRISPR spacer
cggctagcggctatgcagagttacttatcc	Protospacer
*.*****.********.*************

173. spacer 2.3|1131089|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448951 (Streptococcus phage Javan470, complete genome) position: , mismatch: 3, identity: 0.9

cagctagtggctatgcggagttacttatcc	CRISPR spacer
cggctagcggctatgcagagttacttatcc	Protospacer
*.*****.********.*************

174. spacer 2.3|1131089|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448950 (Streptococcus phage Javan464, complete genome) position: , mismatch: 3, identity: 0.9

cagctagtggctatgcggagttacttatcc	CRISPR spacer
ctgcgagtggctatgcggagttgcttatcc	Protospacer
* ** *****************.*******

175. spacer 2.3|1131089|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448975 (Streptococcus phage Javan526, complete genome) position: , mismatch: 3, identity: 0.9

cagctagtggctatgcggagttacttatcc	CRISPR spacer
ctgcgagtggctatgcggagctacttatcc	Protospacer
* ** ***************.*********

176. spacer 2.3|1131089|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448782 (Streptococcus phage Javan501, complete genome) position: , mismatch: 3, identity: 0.9

cagctagtggctatgcggagttacttatcc	CRISPR spacer
ctgcgagtggctatgcggagctacttatcc	Protospacer
* ** ***************.*********

177. spacer 2.8|1131419|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to JX409894 (Streptococcus phage LYGO9, complete genome) position: , mismatch: 3, identity: 0.9

caagagcgagggcatttgtcttatctaatt	CRISPR spacer
caaaagcgagggcatttgtcttatctaaag	Protospacer
***.************************

178. spacer 2.8|1131419|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to JX409895 (Streptococcus phage JX01, complete genome) position: , mismatch: 3, identity: 0.9

caagagcgagggcatttgtcttatctaatt	CRISPR spacer
caaaagcgagggcatttgtcttatctaaag	Protospacer
***.************************

179. spacer 2.8|1131419|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MH853356 (Streptococcus phage LF2, partial genome) position: , mismatch: 3, identity: 0.9

caagagcgagggcatttgtcttatctaatt	CRISPR spacer
caaaagcgagggcatttgtcttatctaaag	Protospacer
***.************************

180. spacer 2.8|1131419|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448871 (Streptococcus phage Javan196, complete genome) position: , mismatch: 3, identity: 0.9

caagagcgagggcatttgtcttatctaatt	CRISPR spacer
caaaagcgagggcatttgtcttatctaaag	Protospacer
***.************************

181. spacer 2.8|1131419|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448971 (Streptococcus phage Javan52, complete genome) position: , mismatch: 3, identity: 0.9

caagagcgagggcatttgtcttatctaatt	CRISPR spacer
caaaagcgagggcatttgtcttatctaaag	Protospacer
***.************************

182. spacer 2.8|1131419|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448956 (Streptococcus phage Javan48, complete genome) position: , mismatch: 3, identity: 0.9

caagagcgagggcatttgtcttatctaatt	CRISPR spacer
caaaagcgagggcatttgtcttatctaaag	Protospacer
***.************************

183. spacer 2.8|1131419|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448775 (Streptococcus phage Javan489, complete genome) position: , mismatch: 3, identity: 0.9

caagagcgagggcatttgtcttatctaatt	CRISPR spacer
caaaagcgagggcatttgtcttatctaaag	Protospacer
***.************************

184. spacer 2.8|1131419|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448961 (Streptococcus phage Javan494, complete genome) position: , mismatch: 3, identity: 0.9

caagagcgagggcatttgtcttatctaatt	CRISPR spacer
caaaagcgagggcatttgtcttatctaaag	Protospacer
***.************************

185. spacer 2.8|1131419|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448794 (Streptococcus phage Javan525, complete genome) position: , mismatch: 3, identity: 0.9

caagagcgagggcatttgtcttatctaatt	CRISPR spacer
caaaagcgagggcatttgtcttatctaaag	Protospacer
***.************************

186. spacer 2.8|1131419|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448697 (Streptococcus phage Javan185, complete genome) position: , mismatch: 3, identity: 0.9

caagagcgagggcatttgtcttatctaatt	CRISPR spacer
caaaagcgagggcatttgtcttatctaaag	Protospacer
***.************************

187. spacer 2.8|1131419|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448953 (Streptococcus phage Javan474, complete genome) position: , mismatch: 3, identity: 0.9

caagagcgagggcatttgtcttatctaatt	CRISPR spacer
caaaagcgagggcatttgtcttatctaaag	Protospacer
***.************************

188. spacer 2.8|1131419|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448693 (Streptococcus phage Javan177, complete genome) position: , mismatch: 3, identity: 0.9

caagagcgagggcatttgtcttatctaatt	CRISPR spacer
caaaagcgagggcatttgtcttatctaaag	Protospacer
***.************************

189. spacer 2.8|1131419|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448945 (Streptococcus phage Javan454, complete genome) position: , mismatch: 3, identity: 0.9

caagagcgagggcatttgtcttatctaatt	CRISPR spacer
caaaagcgagggcatttgtcttatctaaag	Protospacer
***.************************

190. spacer 2.8|1131419|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448729 (Streptococcus phage Javan31, complete genome) position: , mismatch: 3, identity: 0.9

caagagcgagggcatttgtcttatctaatt	CRISPR spacer
caaaagcgagggcatttgtcttatctaaag	Protospacer
***.************************

191. spacer 2.8|1131419|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448696 (Streptococcus phage Javan183, complete genome) position: , mismatch: 3, identity: 0.9

caagagcgagggcatttgtcttatctaatt	CRISPR spacer
caaaagcgagggcatttgtcttatctaaag	Protospacer
***.************************

192. spacer 2.8|1131419|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448837 (Streptococcus phage Javan10, complete genome) position: , mismatch: 3, identity: 0.9

caagagcgagggcatttgtcttatctaatt	CRISPR spacer
caaaagcgagggcatttgtcttatctaaag	Protospacer
***.************************

193. spacer 2.8|1131419|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448868 (Streptococcus phage Javan188, complete genome) position: , mismatch: 3, identity: 0.9

caagagcgagggcatttgtcttatctaatt	CRISPR spacer
caaaagcgagggcatttgtcttatctaaag	Protospacer
***.************************

194. spacer 2.8|1131419|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448691 (Streptococcus phage Javan17, complete genome) position: , mismatch: 3, identity: 0.9

caagagcgagggcatttgtcttatctaatt	CRISPR spacer
caaaagcgagggcatttgtcttatctaaag	Protospacer
***.************************

195. spacer 2.8|1131419|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448866 (Streptococcus phage Javan184, complete genome) position: , mismatch: 3, identity: 0.9

caagagcgagggcatttgtcttatctaatt	CRISPR spacer
caaaagcgagggcatttgtcttatctaaag	Protospacer
***.************************

196. spacer 2.8|1131419|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448765 (Streptococcus phage Javan459, complete genome) position: , mismatch: 3, identity: 0.9

caagagcgagggcatttgtcttatctaatt	CRISPR spacer
caaaagcgagggcatttgtcttatctaaag	Protospacer
***.************************

197. spacer 2.8|1131419|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448699 (Streptococcus phage Javan189, complete genome) position: , mismatch: 3, identity: 0.9

caagagcgagggcatttgtcttatctaatt	CRISPR spacer
caaaagcgagggcatttgtcttatctaaag	Protospacer
***.************************

198. spacer 2.8|1131419|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448867 (Streptococcus phage Javan186, complete genome) position: , mismatch: 3, identity: 0.9

caagagcgagggcatttgtcttatctaatt	CRISPR spacer
caaaagcgagggcatttgtcttatctaaag	Protospacer
***.************************

199. spacer 2.8|1131419|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448948 (Streptococcus phage Javan46, complete genome) position: , mismatch: 3, identity: 0.9

caagagcgagggcatttgtcttatctaatt	CRISPR spacer
caaaagcgagggcatttgtcttatctaaag	Protospacer
***.************************

200. spacer 2.8|1131419|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448768 (Streptococcus phage Javan47, complete genome) position: , mismatch: 3, identity: 0.9

caagagcgagggcatttgtcttatctaatt	CRISPR spacer
caaaagcgagggcatttgtcttatctaaag	Protospacer
***.************************

201. spacer 2.8|1131419|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448793 (Streptococcus phage Javan523, complete genome) position: , mismatch: 3, identity: 0.9

caagagcgagggcatttgtcttatctaatt	CRISPR spacer
aaaaagcgagggcgtttgtcttatctaatt	Protospacer
 **.*********.****************

202. spacer 2.8|1131419|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448767 (Streptococcus phage Javan467, complete genome) position: , mismatch: 4, identity: 0.867

caagagcgagggcatttgtcttatctaatt	CRISPR spacer
caaaagcgagggcatttgtcttatcttaag	Protospacer
***.********************** *

203. spacer 2.8|1131419|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to NC_004586 (Streptococcus pyogenes phage 315.3, complete genome) position: , mismatch: 4, identity: 0.867

caagagcgagggcatttgtcttatctaatt	CRISPR spacer
caaaagcgagggcatttgtcttatcttaag	Protospacer
***.********************** *

204. spacer 2.8|1131419|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448943 (Streptococcus phage Javan450, complete genome) position: , mismatch: 4, identity: 0.867

caagagcgagggcatttgtcttatctaatt	CRISPR spacer
caaaagcgagggcatttgtcttatcttaag	Protospacer
***.********************** *

205. spacer 2.8|1131419|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448786 (Streptococcus phage Javan509, complete genome) position: , mismatch: 4, identity: 0.867

caagagcgagggcatttgtcttatctaatt	CRISPR spacer
caaaagcgagggcatttgtcttatcttaag	Protospacer
***.********************** *

206. spacer 2.8|1131419|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448742 (Streptococcus phage Javan37, complete genome) position: , mismatch: 4, identity: 0.867

caagagcgagggcatttgtcttatctaatt	CRISPR spacer
caaaagcgagggtatttgtcttatctaaag	Protospacer
***.********.***************

207. spacer 2.21|1132080|26|NC_019042|PILER-CR matches to NZ_LR723671 (Rhizobium flavum strain YW14 plasmid 2) position: , mismatch: 4, identity: 0.846

cctctgctgtatcaatagcatcacga	CRISPR spacer
gctctgctgtatcaatagcataatgg	Protospacer
 ******************** *.*.

208. spacer 2.22|1132146|27|NC_019042|PILER-CR matches to NZ_CP032629 (Lactococcus sp. 1JSPR-7 plasmid unnamed2, complete sequence) position: , mismatch: 4, identity: 0.852

aaagtttatccaaaaattcttgtgaaa	CRISPR spacer
ataatttatccaaaaattcttctgaac	Protospacer
* *.***************** ****

209. spacer 2.8|1131419|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448829 (Streptococcus phage Javan7, complete genome) position: , mismatch: 5, identity: 0.833

caagagcgagggcatttgtcttatctaatt	CRISPR spacer
gcaaagcgagggcatttgtcttatctaaag	Protospacer
  *.************************

210. spacer 2.8|1131419|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448749 (Streptococcus phage Javan39, complete genome) position: , mismatch: 5, identity: 0.833

caagagcgagggcatttgtcttatctaatt	CRISPR spacer
gcaaagcgagggcatttgtcttatctaaag	Protospacer
  *.************************

211. spacer 2.8|1131419|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MH853355 (Streptococcus phage LF1, complete genome) position: , mismatch: 5, identity: 0.833

caagagcgagggcatttgtcttatctaatt	CRISPR spacer
gcaaagcgagggcatttgtcttatctaaag	Protospacer
  *.************************

212. spacer 2.8|1131419|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to NC_009819 (Streptococcus phage P9, complete genome) position: , mismatch: 5, identity: 0.833

caagagcgagggcatttgtcttatctaatt	CRISPR spacer
caaaagcgagggcatttgtcttatctcgga	Protospacer
***.********************** .

213. spacer 2.8|1131419|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to AY149214 (Streptococcus agalactiae bacteriophage B30 peptidoglycan endolysin gene, complete cds) position: , mismatch: 5, identity: 0.833

caagagcgagggcatttgtcttatctaatt	CRISPR spacer
gcaaagcgagggcatttgtcttatctaaag	Protospacer
  *.************************

214. spacer 2.8|1131419|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MH853358 (Streptococcus phage LF4, complete genome) position: , mismatch: 5, identity: 0.833

caagagcgagggcatttgtcttatctaatt	CRISPR spacer
gcaaagcgagggcatttgtcttatctaaag	Protospacer
  *.************************

215. spacer 2.8|1131419|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448680 (Streptococcus phage Javan139, complete genome) position: , mismatch: 5, identity: 0.833

caagagcgagggcatttgtcttatctaatt	CRISPR spacer
caaaagcgagggcatttgtcttatctcgga	Protospacer
***.********************** .

216. spacer 2.8|1131419|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448777 (Streptococcus phage Javan491, complete genome) position: , mismatch: 5, identity: 0.833

caagagcgagggcatttgtcttatctaatt	CRISPR spacer
aaaaagcgagggcatttgtcttatcttaag	Protospacer
 **.********************** *

217. spacer 2.9|1131485|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to NC_014023 (Bacillus megaterium QM B1551 plasmid pBM700, complete sequence) position: , mismatch: 5, identity: 0.833

tttacacgttttagaaattgcctatcgtac-	CRISPR spacer
tttacacgctttagaaattgcccatt-tata	Protospacer
********.*************.**. **.

218. spacer 2.22|1132146|27|NC_019042|PILER-CR matches to NZ_LR214986 (Mycoplasma cynos strain NCTC10142 plasmid 13) position: , mismatch: 5, identity: 0.815

aaagtttatccaaaaattcttgtgaaa	CRISPR spacer
aaagtttatccaaaaatttttttatat	Protospacer
******************.** *. *

219. spacer 3.6|1581640|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KP342511 (Enterococcus faecium isolate N12-493 plasmid pEfm12493, complete sequence) position: , mismatch: 5, identity: 0.853

catataaagagttggggtctgtactc-gtccaagt	CRISPR spacer
catataaagagttggagtctgaactctgcctaag-	Protospacer
***************.***** **** *.*.***

220. spacer 2.5|1131221|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MT227925 (Vibrio phage phiV141, complete genome) position: , mismatch: 6, identity: 0.8

agtgaccccgtcgttaaccgtgttgttgta	CRISPR spacer
acatagcacgtcgttagccgtgttgttgta	Protospacer
*   * * ********.*************

221. spacer 2.8|1131419|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448736 (Streptococcus phage Javan35, complete genome) position: , mismatch: 6, identity: 0.8

caagagcgagggcatttgtcttatctaatt	CRISPR spacer
gcaaagcgagggcatttgtcttatcttaag	Protospacer
  *.********************** *

222. spacer 2.8|1131419|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448781 (Streptococcus phage Javan5, complete genome) position: , mismatch: 6, identity: 0.8

caagagcgagggcatttgtcttatctaatt	CRISPR spacer
gcaaagcgagggcatttgtcttatcttaag	Protospacer
  *.********************** *

223. spacer 2.8|1131419|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448938 (Streptococcus phage Javan44, complete genome) position: , mismatch: 6, identity: 0.8

caagagcgagggcatttgtcttatctaatt	CRISPR spacer
gcaaagcgagggcatttgtcttatcttaag	Protospacer
  *.********************** *

224. spacer 2.8|1131419|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448859 (Streptococcus phage Javan170, complete genome) position: , mismatch: 6, identity: 0.8

caagagcgagggcatttgtcttatctaatt	CRISPR spacer
gcaaagcgagggcatttgtcttatcttaag	Protospacer
  *.********************** *

225. spacer 2.8|1131419|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448911 (Streptococcus phage Javan34, complete genome) position: , mismatch: 6, identity: 0.8

caagagcgagggcatttgtcttatctaatt	CRISPR spacer
gcaaagcgagggcatttgtcttatcttaag	Protospacer
  *.********************** *

226. spacer 2.8|1131419|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448851 (Streptococcus phage Javan14, complete genome) position: , mismatch: 6, identity: 0.8

caagagcgagggcatttgtcttatctaatt	CRISPR spacer
gcaaagcgagggcttttgtcttatctaaag	Protospacer
  *.********* **************

227. spacer 2.8|1131419|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448916 (Streptococcus phage Javan36, complete genome) position: , mismatch: 6, identity: 0.8

caagagcgagggcatttgtcttatctaatt	CRISPR spacer
gcaaagcgagggcatttgtcttatcttaag	Protospacer
  *.********************** *

228. spacer 2.8|1131419|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448688 (Streptococcus phage Javan161, complete genome) position: , mismatch: 6, identity: 0.8

caagagcgagggcatttgtcttatctaatt	CRISPR spacer
gcaaagcgagggcatttgtcttatcttaag	Protospacer
  *.********************** *

229. spacer 2.8|1131419|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448683 (Streptococcus phage Javan149, complete genome) position: , mismatch: 6, identity: 0.8

caagagcgagggcatttgtcttatctaatt	CRISPR spacer
caaaagcgagggcgtttgtcttatctcgga	Protospacer
***.*********.************ .

230. spacer 2.15|1131881|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046163 (Vibrio sp. THAF191c plasmid pTHAF191c_b, complete sequence) position: , mismatch: 6, identity: 0.8

atagttttacgtgtttttaagttttgagtt	CRISPR spacer
agcgcttcacgtgtttttaagttttgtgct	Protospacer
*  *.**.****************** *.*

231. spacer 2.15|1131881|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046066 (Vibrio sp. THAF191d plasmid pTHAF191d_b, complete sequence) position: , mismatch: 6, identity: 0.8

atagttttacgtgtttttaagttttgagtt	CRISPR spacer
agcgcttcacgtgtttttaagttttgtgct	Protospacer
*  *.**.****************** *.*

232. spacer 2.15|1131881|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045356 (Vibrio sp. THAF64 plasmid pTHAF64_a, complete sequence) position: , mismatch: 6, identity: 0.8

atagttttacgtgtttttaagttttgagtt	CRISPR spacer
agcgcttcacgtgtttttaagttttgtgct	Protospacer
*  *.**.****************** *.*

233. spacer 2.16|1131947|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP043441 (Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.8

-tcaatacaagcatctgcggacgattgccta	CRISPR spacer
gtctccac-agcatcttcggacgattgcctg	Protospacer
 **  .** ******* *************.

234. spacer 2.22|1132146|27|NC_019042|PILER-CR matches to NZ_CP045339 (Vibrio sp. THAF190c plasmid pTHAF190c_a, complete sequence) position: , mismatch: 6, identity: 0.778

aaagtttatccaaaaattcttgtgaaa	CRISPR spacer
gaaatttatccaaaaattcttggtatt	Protospacer
.**.******************  *

235. spacer 3.3|1581442|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR214986 (Mycoplasma cynos strain NCTC10142 plasmid 13) position: , mismatch: 6, identity: 0.824

taaccaaaattacttaaattttgat-aagaatagc	CRISPR spacer
taaccaacattatttaaattttgatcaagtgcag-	Protospacer
******* ****.************ *** ..**

236. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to HQ317291 (Synechococcus phage S-RIM2 R9_2006, complete genome) position: , mismatch: 6, identity: 0.824

agcaaaaaacaatgccaaaaagatgaa----tgagatt	CRISPR spacer
agcaaaaaacaatggcaaaaagaggaactattga----	Protospacer
************** ******** ***    ***

237. spacer 2.4|1131155|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP017296 (Nostoc sp. NIES-3756 plasmid pNOS3756_1, complete sequence) position: , mismatch: 7, identity: 0.767

acaatagtccgaccttgcgcatatctttgc	CRISPR spacer
acaatagttcgacctagcgcataaaaatcc	Protospacer
********.****** *******    * *

238. spacer 2.5|1131221|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to NC_047969 (Klebsiella virus KP32 isolate 194, complete genome) position: , mismatch: 7, identity: 0.767

agtgaccccgtcgttaaccgtgttgttgta	CRISPR spacer
agcgaccccctcgttaaccgtgtcctccca	Protospacer
**.****** *************. *. .*

239. spacer 2.6|1131287|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046573 (Rhodococcus sp. WAY2 plasmid pRWAY01, complete sequence) position: , mismatch: 7, identity: 0.767

ttggtattcgtggggtgcttga-----atgagcaa	CRISPR spacer
ctggtatgcgtggggtgcttgatgccgatg-----	Protospacer
.****** **************     ***

240. spacer 2.8|1131419|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448858 (Streptococcus phage Javan166, complete genome) position: , mismatch: 7, identity: 0.767

caagagcgagggcatttgtcttatctaatt	CRISPR spacer
gcaaagcgagggcatttgtcttatctcgga	Protospacer
  *.********************** .

241. spacer 2.8|1131419|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448848 (Streptococcus phage Javan126, complete genome) position: , mismatch: 7, identity: 0.767

caagagcgagggcatttgtcttatctaatt	CRISPR spacer
gcaaagcgagggcatttgtcttatctcgga	Protospacer
  *.********************** .

242. spacer 2.8|1131419|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448857 (Streptococcus phage Javan164, complete genome) position: , mismatch: 7, identity: 0.767

caagagcgagggcatttgtcttatctaatt	CRISPR spacer
gcaaagcgagggcatttgtcttatctcgga	Protospacer
  *.********************** .

243. spacer 2.8|1131419|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448677 (Streptococcus phage Javan133, complete genome) position: , mismatch: 7, identity: 0.767

caagagcgagggcatttgtcttatctaatt	CRISPR spacer
gcaaagcgagggcatttgtcttatctcgga	Protospacer
  *.********************** .

244. spacer 2.8|1131419|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448679 (Streptococcus phage Javan137, complete genome) position: , mismatch: 7, identity: 0.767

caagagcgagggcatttgtcttatctaatt	CRISPR spacer
caaaagcgagggcgtttgtcttatcacgga	Protospacer
***.*********.***********  .

245. spacer 2.8|1131419|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448690 (Streptococcus phage Javan169, complete genome) position: , mismatch: 7, identity: 0.767

caagagcgagggcatttgtcttatctaatt	CRISPR spacer
gcaaagcgagggcgtttgtcttatcttaag	Protospacer
  *.*********.************ *

246. spacer 2.8|1131419|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448673 (Streptococcus phage Javan119, complete genome) position: , mismatch: 7, identity: 0.767

caagagcgagggcatttgtcttatctaatt	CRISPR spacer
gcaaagcgagggcgtttgtcttatcttaga	Protospacer
  *.*********.************ *

247. spacer 2.8|1131419|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448685 (Streptococcus phage Javan155, complete genome) position: , mismatch: 7, identity: 0.767

caagagcgagggcatttgtcttatctaatt	CRISPR spacer
aaaatgcgagggcggttgtcttatctaaag	Protospacer
 **. ********. *************

248. spacer 2.8|1131419|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448853 (Streptococcus phage Javan144, complete genome) position: , mismatch: 7, identity: 0.767

caagagcgagggcatttgtcttatctaatt	CRISPR spacer
aaaatgcgagggcggttgtcttatctaaag	Protospacer
 **. ********. *************

249. spacer 3.2|1581377|33|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to MK448915 (Streptococcus phage Javan350, complete genome) position: , mismatch: 7, identity: 0.788

tgacagtgatattcaagttgatgcaattgcgat	CRISPR spacer
tcagtcagatatacaagttgatgcaattgcaat	Protospacer
* *    ***** *****************.**

250. spacer 3.2|1581377|33|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024656 (Bacillus cereus strain MLY1 plasmid pMLY1.2, complete sequence) position: , mismatch: 7, identity: 0.788

tgacagtgatattcaagttgatgcaattgcgat	CRISPR spacer
ttacagtgatattaaagttgatgaaaaagggag	Protospacer
* *********** ********* **  * **

251. spacer 3.2|1581377|33|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020745 (Bacillus mycoides strain Gnyt1 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.788

tgacagtgatattcaagttgatgcaattgcgat	CRISPR spacer
ttacagtgatattaaagttgatgaaaaagggag	Protospacer
* *********** ********* **  * **

252. spacer 3.6|1581640|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015608 (Bacillus safensis strain U14-5 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.794

catataaagagttggggtctgtactcgtccaagt	CRISPR spacer
catataaagcgtaggggtctgtactctacccaaa	Protospacer
********* ** *************  ** *.

253. spacer 3.8|1581771|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR214999 (Mycoplasma conjunctivae strain NCTC10147 plasmid 3) position: , mismatch: 7, identity: 0.794

tgttctaacacctaataaaaagt--ttgctataaaa	CRISPR spacer
tgttgtaaaacctaataaaaagttattaccatca--	Protospacer
**** *** **************  **.*.** *

254. spacer 3.8|1581771|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR215005 (Mycoplasma conjunctivae strain NCTC10147 plasmid 9) position: , mismatch: 7, identity: 0.794

tgttctaacacctaataaaaagt--ttgctataaaa	CRISPR spacer
tgttgtaaaacctaataaaaagttattaccatca--	Protospacer
**** *** **************  **.*.** *

255. spacer 3.8|1581771|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR215007 (Mycoplasma conjunctivae strain NCTC10147 plasmid 11) position: , mismatch: 7, identity: 0.794

tgttctaacacctaataaaaagt--ttgctataaaa	CRISPR spacer
tgttgtaaaacctaataaaaagttattaccatca--	Protospacer
**** *** **************  **.*.** *

256. spacer 3.8|1581771|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to LR214969 (Mycoplasma fermentans strain NCTC10117 genome assembly, plasmid: 15) position: , mismatch: 7, identity: 0.794

tgttctaacacctaataaaaagt--ttgctataaaa	CRISPR spacer
tgttgtaaaacctaataaaaagttattaccatca--	Protospacer
**** *** **************  **.*.** *

257. spacer 2.3|1131089|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053858 (Rhizobium pusense strain 76 plasmid pR76, complete sequence) position: , mismatch: 8, identity: 0.733

cagctagtggctatgcggagttacttatcc	CRISPR spacer
cagctagtgactttgcggagttaccgcggt	Protospacer
*********.** ***********.    .

258. spacer 2.8|1131419|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448682 (Streptococcus phage Javan143, complete genome) position: , mismatch: 8, identity: 0.733

caagagcgagggcatttgtcttatctaatt	CRISPR spacer
gcaaagcgagggcgtttgtcttatctcgga	Protospacer
  *.*********.************ .

259. spacer 2.8|1131419|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to MK448854 (Streptococcus phage Javan146, complete genome) position: , mismatch: 8, identity: 0.733

caagagcgagggcatttgtcttatctaatt	CRISPR spacer
gcaaagcgagggcgtttgtcttatctcgga	Protospacer
  *.*********.************ .

260. spacer 2.20|1132145|31|NC_019042|CRISPRCasFinder,CRT matches to NZ_CP017949 (Tenericutes bacterium MO-XQ plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.742

aaaagtttatccaaaaattcttgtgaaattt	CRISPR spacer
taacaacgatccaaaagttcttgagaaattt	Protospacer
 ** . . ********.****** *******

261. spacer 2.20|1132145|31|NC_019042|CRISPRCasFinder,CRT matches to MN850622 (Escherichia phage mobillu, complete genome) position: , mismatch: 8, identity: 0.742

aaaagtttatccaaaaattcttgtgaaattt	CRISPR spacer
aaaggcttatccaaaaattcttgaagcagat	Protospacer
***.*.***************** .. *  *

262. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP017960 (Synechococcus sp. NIES-970 plasmid plasmid1 DNA, complete sequence) position: , mismatch: 8, identity: 0.765

agcaaaaaacaatgccaaaaagatgaatgagatt	CRISPR spacer
caccaaaaatactgccaaaaagatgaataaaagt	Protospacer
 .* *****.* ****************.*.* *

263. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to JF974299 (Synechococcus phage S-CAM8 strain 0608SB47, *** SEQUENCING IN PROGRESS ***, 4 unordered pieces) position: , mismatch: 8, identity: 0.765

agcaaaaaacaatgccaaaaagatgaa----tgagatt	CRISPR spacer
actaaaaaacaatggcaaaaagaggaactattga----	Protospacer
* .*********** ******** ***    ***

264. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to KU686203 (Synechococcus phage S-CAM8 isolate 0810PA29, complete genome) position: , mismatch: 8, identity: 0.765

agcaaaaaacaatgccaaaaagatgaa----tgagatt	CRISPR spacer
actaaaaaacaatggcaaaaagaggaactattga----	Protospacer
* .*********** ******** ***    ***

265. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to NC_021530 (Synechococcus phage S-CAM8 strain S-CAM8 06008BI06, complete genome) position: , mismatch: 8, identity: 0.765

agcaaaaaacaatgccaaaaagatgaa----tgagatt	CRISPR spacer
actaaaaaacaatggcaaaaagaggaactattga----	Protospacer
* .*********** ******** ***    ***

266. spacer 3.11|1581969|33|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to NC_008308 (Sphingomonas sp. KA1 plasmid pCAR3 DNA, complete sequence) position: , mismatch: 8, identity: 0.758

taaaagaaaatatcgacacttcttcagcaatgg	CRISPR spacer
ttgaagaaaagatcgacacttcgtcagctgccg	Protospacer
* .******* *********** ***** .. *

267. spacer 3.11|1581969|33|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009453 (Sphingopyxis sp. 113P3 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

taaaagaaaatatcgacacttcttcagcaatgg	CRISPR spacer
ttgaagaaaagatcgacacttcgtcagctgccg	Protospacer
* .******* *********** ***** .. *

268. spacer 3.11|1581969|33|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP046254 (Sphingobium sp. CAP-1 plasmid p1, complete sequence) position: , mismatch: 8, identity: 0.758

taaaagaaaatatcgacacttcttcagcaatgg	CRISPR spacer
ttgaagaaaagatcgacacttcgtcagctgccg	Protospacer
* .******* *********** ***** .. *

269. spacer 3.11|1581969|33|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to NC_020542 (Sphingomonas sp. MM-1 plasmid pISP0, complete sequence) position: , mismatch: 8, identity: 0.758

taaaagaaaatatcgacacttcttcagcaatgg	CRISPR spacer
ttgaagaaaagatcgacacttcgtcagctgccg	Protospacer
* .******* *********** ***** .. *

270. spacer 3.11|1581969|33|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015989 (Sphingobium sp. EP60837 plasmid pEP2, complete sequence) position: , mismatch: 8, identity: 0.758

taaaagaaaatatcgacacttcttcagcaatgg	CRISPR spacer
ttgaagaaaagatcgacacttcgtcagctgccg	Protospacer
* .******* *********** ***** .. *

271. spacer 2.14|1131815|30|NC_019042|PILER-CR,CRISPRCasFinder,CRT matches to CP035920 (Vibrio cidicii strain 2423-01 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

agataggtaaaacccgctgccaaaaagact	CRISPR spacer
ggtcgaataaaacccgctgctaaaaagaaa	Protospacer
.* ....*************.*******

272. spacer 2.19|1132079|30|NC_019042|CRISPRCasFinder,CRT matches to NC_031062 (Erwinia phage vB_EamP_Frozen, complete genome) position: , mismatch: 9, identity: 0.7

acctctgctgtatcaatagcatcacgactt	CRISPR spacer
ttacttactgcatcaatagcatcacgaccg	Protospacer
 . ..*.***.*****************.

273. spacer 2.19|1132079|30|NC_019042|CRISPRCasFinder,CRT matches to KX098391 (Erwinia phage vB_EamP_Gutmeister, complete genome) position: , mismatch: 9, identity: 0.7

acctctgctgtatcaatagcatcacgactt	CRISPR spacer
ttacttactgcatcaatagcatcacgaccg	Protospacer
 . ..*.***.*****************.

274. spacer 2.19|1132079|30|NC_019042|CRISPRCasFinder,CRT matches to KX098390 (Erwinia phage vB_EamP_Rexella, complete genome) position: , mismatch: 9, identity: 0.7

acctctgctgtatcaatagcatcacgactt	CRISPR spacer
ttacttactgcatcaatagcatcacgaccg	Protospacer
 . ..*.***.*****************.

275. spacer 2.19|1132079|30|NC_019042|CRISPRCasFinder,CRT matches to KF806588 (Erwinia phage Ea9-2, complete genome) position: , mismatch: 9, identity: 0.7

acctctgctgtatcaatagcatcacgactt	CRISPR spacer
ttacttactgcatcaatagcatcacgaccg	Protospacer
 . ..*.***.*****************.

276. spacer 3.3|1581442|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to MH622943 (Myoviridae sp. isolate ctbc_4, complete genome) position: , mismatch: 9, identity: 0.735

taaccaaaattacttaaattttgataagaatagc	CRISPR spacer
ggaacattattacataaattttcataagaatatg	Protospacer
 .* **  ***** ******** *********

277. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024656 (Bacillus cereus strain MLY1 plasmid pMLY1.2, complete sequence) position: , mismatch: 9, identity: 0.735

agcaaaaaacaatgccaaaaagatgaatgagatt	CRISPR spacer
aagtaaaaccaatgccaaaaagatgtatgattcg	Protospacer
*.  **** **************** ****  .

278. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021437 (Bacillus thuringiensis strain C15 plasmid pBMB240, complete sequence) position: , mismatch: 9, identity: 0.735

agcaaaaaacaatgccaaaaagatgaatgagatt	CRISPR spacer
aagtaaaaccaatgccaaaaagatgtatgattcg	Protospacer
*.  **** **************** ****  .

279. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021437 (Bacillus thuringiensis strain C15 plasmid pBMB240, complete sequence) position: , mismatch: 9, identity: 0.735

agcaaaaaacaatgccaaaaagatgaatgagatt	CRISPR spacer
aagtaaaaccaatgccaaaaagatgtatgattcg	Protospacer
*.  **** **************** ****  .

280. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016489 (Synechococcus sp. PCC 8807 plasmid unnamed6, complete sequence) position: , mismatch: 9, identity: 0.735

agcaaaaaacaatgccaaaaagatgaatgagatt	CRISPR spacer
ccccaaaaatactgccaaaaagatgaataaacgt	Protospacer
  * *****.* ****************.*.  *

281. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016476 (Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.735

agcaaaaaacaatgccaaaaagatgaatgagatt	CRISPR spacer
ccccaaaaatactgccaaaaagatgaataaatgt	Protospacer
  * *****.* ****************.*.  *

282. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to KX349325 (Cyanophage S-RIM12 isolate W1_24_0910, complete genome) position: , mismatch: 9, identity: 0.735

agcaaaaaacaatgccaaaaagatgaa----tgagatt	CRISPR spacer
gcaaaaaaacaatggcaaaaagaggaactattga----	Protospacer
.  *********** ******** ***    ***

283. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to KX349280 (Synechococcus phage S-RIM2 isolate W2_02_0709, complete genome) position: , mismatch: 9, identity: 0.735

agcaaaaaacaatgccaaaaagatgaa----tgagatt	CRISPR spacer
gcaaaaaaacaatggcaaaaagaggaactattga----	Protospacer
.  *********** ******** ***    ***

284. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to KX349273 (Synechococcus phage S-RIM2 isolate W1_01_0910, complete genome) position: , mismatch: 9, identity: 0.735

agcaaaaaacaatgccaaaaagatgaa----tgagatt	CRISPR spacer
gcaaaaaaacaatggcaaaaagaggaactattga----	Protospacer
.  *********** ******** ***    ***

285. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to KX349284 (Synechococcus phage S-RIM2 isolate W2_39_0910, complete genome) position: , mismatch: 9, identity: 0.735

agcaaaaaacaatgccaaaaagatgaa----tgagatt	CRISPR spacer
gcaaaaaaacaatggcaaaaagaggaactattga----	Protospacer
.  *********** ******** ***    ***

286. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to KX349275 (Synechococcus phage S-RIM2 isolate W1_08_0709, complete genome) position: , mismatch: 9, identity: 0.735

agcaaaaaacaatgccaaaaagatgaa----tgagatt	CRISPR spacer
gcaaaaaaacaatggcaaaaagaggaactattga----	Protospacer
.  *********** ******** ***    ***

287. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to KX349270 (Synechococcus phage S-RIM2 isolate RW_40_1112, complete genome) position: , mismatch: 9, identity: 0.735

agcaaaaaacaatgccaaaaagatgaa----tgagatt	CRISPR spacer
gcaaaaaaacaatggcaaaaagaggaactattga----	Protospacer
.  *********** ******** ***    ***

288. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to KX349255 (Synechococcus phage S-RIM2 isolate RW_01_0709, complete genome) position: , mismatch: 9, identity: 0.735

agcaaaaaacaatgccaaaaagatgaa----tgagatt	CRISPR spacer
gcaaaaaaacaatggcaaaaagaggaactattga----	Protospacer
.  *********** ******** ***    ***

289. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to KX349243 (Synechococcus phage S-RIM2 isolate Np_11_1112, complete genome) position: , mismatch: 9, identity: 0.735

agcaaaaaacaatgccaaaaagatgaa----tgagatt	CRISPR spacer
gcaaaaaaacaatggcaaaaagaggaactattga----	Protospacer
.  *********** ******** ***    ***

290. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to KX349269 (Synechococcus phage S-RIM2 isolate RW_34_0905, complete genome) position: , mismatch: 9, identity: 0.735

agcaaaaaacaatgccaaaaagatgaa----tgagatt	CRISPR spacer
gcaaaaaaacaatggcaaaaagaggaactattga----	Protospacer
.  *********** ******** ***    ***

291. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to KX349326 (Cyanophage S-RIM12 isolate WH_05_0310, complete genome) position: , mismatch: 9, identity: 0.735

agcaaaaaacaatgccaaaaagatgaa----tgagatt	CRISPR spacer
gcaaaaaaacaatggcaaaaagaggaactattga----	Protospacer
.  *********** ******** ***    ***

292. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to KX349271 (Synechococcus phage S-RIM2 isolate Sn_25_0709, complete genome) position: , mismatch: 9, identity: 0.735

agcaaaaaacaatgccaaaaagatgaa----tgagatt	CRISPR spacer
gcaaaaaaacaatggcaaaaagaggaactattga----	Protospacer
.  *********** ******** ***    ***

293. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to KX349249 (Synechococcus phage S-RIM2 isolate Np_20_0912, complete genome) position: , mismatch: 9, identity: 0.735

agcaaaaaacaatgccaaaaagatgaa----tgagatt	CRISPR spacer
caaaaaaaacaatggcaaaaagaggaactattga----	Protospacer
 . *********** ******** ***    ***

294. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to KX349327 (Cyanophage S-RIM12 isolate WH_07_0310, complete genome) position: , mismatch: 9, identity: 0.735

agcaaaaaacaatgccaaaaagatgaa----tgagatt	CRISPR spacer
gcaaaaaaacaatggcaaaaagaggaactattga----	Protospacer
.  *********** ******** ***    ***

295. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to KX349322 (Cyanophage S-RIM12 isolate Sn_31_0910, complete genome) position: , mismatch: 9, identity: 0.735

agcaaaaaacaatgccaaaaagatgaa----tgagatt	CRISPR spacer
gcaaaaaaacaatggcaaaaagaggaactattga----	Protospacer
.  *********** ******** ***    ***

296. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to KX349320 (Cyanophage S-RIM12 isolate RW_29_1109, complete genome) position: , mismatch: 9, identity: 0.735

agcaaaaaacaatgccaaaaagatgaa----tgagatt	CRISPR spacer
gcaaaaaaacaatggcaaaaagaggaactattga----	Protospacer
.  *********** ******** ***    ***

297. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to KX349310 (Cyanophage S-RIM12 isolate RW_01_0310, complete genome) position: , mismatch: 9, identity: 0.735

agcaaaaaacaatgccaaaaagatgaa----tgagatt	CRISPR spacer
gcaaaaaaacaatggcaaaaagaggaactattga----	Protospacer
.  *********** ******** ***    ***

298. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to KX349227 (Synechococcus phage S-RIM2 isolate Fa_10_0709, complete genome) position: , mismatch: 9, identity: 0.735

agcaaaaaacaatgccaaaaagatgaa----tgagatt	CRISPR spacer
gcaaaaaaacaatggcaaaaagaggaactattga----	Protospacer
.  *********** ******** ***    ***

299. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to KX349256 (Synechococcus phage S-RIM2 isolate RW_02_0113, complete genome) position: , mismatch: 9, identity: 0.735

agcaaaaaacaatgccaaaaagatgaa----tgagatt	CRISPR spacer
gcaaaaaaacaatggcaaaaagaggaactattga----	Protospacer
.  *********** ******** ***    ***

300. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to KX349233 (Synechococcus phage S-RIM2 isolate LIS_11_1010, complete genome) position: , mismatch: 9, identity: 0.735

agcaaaaaacaatgccaaaaagatgaa----tgagatt	CRISPR spacer
gcaaaaaaacaatggcaaaaagaggaactattga----	Protospacer
.  *********** ******** ***    ***

301. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to KX349260 (Synechococcus phage S-RIM2 isolate RW_11_0905, complete genome) position: , mismatch: 9, identity: 0.735

agcaaaaaacaatgccaaaaagatgaa----tgagatt	CRISPR spacer
gcaaaaaaacaatggcaaaaagaggaactattga----	Protospacer
.  *********** ******** ***    ***

302. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to KX349259 (Synechococcus phage S-RIM2 isolate RW_08_1112, complete genome) position: , mismatch: 9, identity: 0.735

agcaaaaaacaatgccaaaaagatgaa----tgagatt	CRISPR spacer
gcaaaaaaacaatggcaaaaagaggaactattga----	Protospacer
.  *********** ******** ***    ***

303. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to KX349266 (Synechococcus phage S-RIM2 isolate RW_26_0905, complete genome) position: , mismatch: 9, identity: 0.735

agcaaaaaacaatgccaaaaagatgaa----tgagatt	CRISPR spacer
gcaaaaaaacaatggcaaaaagaggaactattga----	Protospacer
.  *********** ******** ***    ***

304. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to KX349261 (Synechococcus phage S-RIM2 isolate RW_12_0113, complete genome) position: , mismatch: 9, identity: 0.735

agcaaaaaacaatgccaaaaagatgaa----tgagatt	CRISPR spacer
gcaaaaaaacaatggcaaaaagaggaactattga----	Protospacer
.  *********** ******** ***    ***

305. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to KX349321 (Cyanophage S-RIM12 isolate Sn_07_0910, complete genome) position: , mismatch: 9, identity: 0.735

agcaaaaaacaatgccaaaaagatgaa----tgagatt	CRISPR spacer
gcaaaaaaacaatggcaaaaagaggaactattga----	Protospacer
.  *********** ******** ***    ***

306. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to KX349324 (Cyanophage S-RIM12 isolate W1_12_0610, complete genome) position: , mismatch: 9, identity: 0.735

agcaaaaaacaatgccaaaaagatgaa----tgagatt	CRISPR spacer
gcaaaaaaacaatggcaaaaagaggaactattga----	Protospacer
.  *********** ******** ***    ***

307. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to KX349250 (Synechococcus phage S-RIM2 isolate Np_23_1112, complete genome) position: , mismatch: 9, identity: 0.735

agcaaaaaacaatgccaaaaagatgaa----tgagatt	CRISPR spacer
gcaaaaaaacaatggcaaaaagaggaactattga----	Protospacer
.  *********** ******** ***    ***

308. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to KX349265 (Synechococcus phage S-RIM2 isolate RW_17_0113, complete genome) position: , mismatch: 9, identity: 0.735

agcaaaaaacaatgccaaaaagatgaa----tgagatt	CRISPR spacer
gcaaaaaaacaatggcaaaaagaggaactattga----	Protospacer
.  *********** ******** ***    ***

309. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to KX349240 (Synechococcus phage S-RIM2 isolate Np_03_1112, complete genome) position: , mismatch: 9, identity: 0.735

agcaaaaaacaatgccaaaaagatgaa----tgagatt	CRISPR spacer
gcaaaaaaacaatggcaaaaagaggaactattga----	Protospacer
.  *********** ******** ***    ***

310. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to KX349258 (Synechococcus phage S-RIM2 isolate RW_03_0709, complete genome) position: , mismatch: 9, identity: 0.735

agcaaaaaacaatgccaaaaagatgaa----tgagatt	CRISPR spacer
gcaaaaaaacaatggcaaaaagaggaactattga----	Protospacer
.  *********** ******** ***    ***

311. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to KX349236 (Synechococcus phage S-RIM2 isolate NJ_05_1013, complete genome) position: , mismatch: 9, identity: 0.735

agcaaaaaacaatgccaaaaagatgaa----tgagatt	CRISPR spacer
caaaaaaaacaatggcaaaaagaggaactattga----	Protospacer
 . *********** ******** ***    ***

312. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to KX349282 (Synechococcus phage S-RIM2 isolate W2_14_0910, complete genome) position: , mismatch: 9, identity: 0.735

agcaaaaaacaatgccaaaaagatgaa----tgagatt	CRISPR spacer
gcaaaaaaacaatggcaaaaagaggaactattga----	Protospacer
.  *********** ******** ***    ***

313. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to KX349234 (Synechococcus phage S-RIM2 isolate LIS_12_1010, complete genome) position: , mismatch: 9, identity: 0.735

agcaaaaaacaatgccaaaaagatgaa----tgagatt	CRISPR spacer
gcaaaaaaacaatggcaaaaagaggaactattga----	Protospacer
.  *********** ******** ***    ***

314. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to KX349229 (Synechococcus phage S-RIM2 isolate LIS_01_1010, complete genome) position: , mismatch: 9, identity: 0.735

agcaaaaaacaatgccaaaaagatgaa----tgagatt	CRISPR spacer
gcaaaaaaacaatggcaaaaagaggaactattga----	Protospacer
.  *********** ******** ***    ***

315. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to KX349252 (Synechococcus phage S-RIM2 isolate Np_31_1112, complete genome) position: , mismatch: 9, identity: 0.735

agcaaaaaacaatgccaaaaagatgaa----tgagatt	CRISPR spacer
gcaaaaaaacaatggcaaaaagaggaactattga----	Protospacer
.  *********** ******** ***    ***

316. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to KX349314 (Cyanophage S-RIM12 isolate RW_07_1112, complete genome) position: , mismatch: 9, identity: 0.735

agcaaaaaacaatgccaaaaagatgaa----tgagatt	CRISPR spacer
gcaaaaaaacaatggcaaaaagaggaactattga----	Protospacer
.  *********** ******** ***    ***

317. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to KX349231 (Synechococcus phage S-RIM2 isolate LIS_06_1010, complete genome) position: , mismatch: 9, identity: 0.735

agcaaaaaacaatgccaaaaagatgaa----tgagatt	CRISPR spacer
gcaaaaaaacaatggcaaaaagaggaactattga----	Protospacer
.  *********** ******** ***    ***

318. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to KX349274 (Synechococcus phage S-RIM2 isolate W1_03_0709, complete genome) position: , mismatch: 9, identity: 0.735

agcaaaaaacaatgccaaaaagatgaa----tgagatt	CRISPR spacer
gcaaaaaaacaatggcaaaaagaggaactattga----	Protospacer
.  *********** ******** ***    ***

319. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to KX349308 (Cyanophage S-RIM12 isolate Np_15_0310, complete genome) position: , mismatch: 9, identity: 0.735

agcaaaaaacaatgccaaaaagatgaa----tgagatt	CRISPR spacer
gcaaaaaaacaatggcaaaaagaggaactattga----	Protospacer
.  *********** ******** ***    ***

320. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to KX349316 (Cyanophage S-RIM12 isolate RW_22_0110, complete genome) position: , mismatch: 9, identity: 0.735

agcaaaaaacaatgccaaaaagatgaa----tgagatt	CRISPR spacer
caaaaaaaacaatggcaaaaagaggaactattga----	Protospacer
 . *********** ******** ***    ***

321. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to KX349312 (Cyanophage S-RIM12 isolate RW_04_0709, complete genome) position: , mismatch: 9, identity: 0.735

agcaaaaaacaatgccaaaaagatgaa----tgagatt	CRISPR spacer
gcaaaaaaacaatggcaaaaagaggaactattga----	Protospacer
.  *********** ******** ***    ***

322. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to KX349267 (Synechococcus phage S-RIM2 isolate RW_29_1112, complete genome) position: , mismatch: 9, identity: 0.735

agcaaaaaacaatgccaaaaagatgaa----tgagatt	CRISPR spacer
gcaaaaaaacaatggcaaaaagaggaactattga----	Protospacer
.  *********** ******** ***    ***

323. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to KX349253 (Synechococcus phage S-RIM2 isolate Np_33_0912, complete genome) position: , mismatch: 9, identity: 0.735

agcaaaaaacaatgccaaaaagatgaa----tgagatt	CRISPR spacer
gcaaaaaaacaatggcaaaaagaggaactattga----	Protospacer
.  *********** ******** ***    ***

324. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to KX349244 (Synechococcus phage S-RIM2 isolate Np_12_0912, complete genome) position: , mismatch: 9, identity: 0.735

agcaaaaaacaatgccaaaaagatgaa----tgagatt	CRISPR spacer
gcaaaaaaacaatggcaaaaagaggaactattga----	Protospacer
.  *********** ******** ***    ***

325. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to KX349226 (Synechococcus phage S-RIM2 isolate Fa_02_0709, complete genome) position: , mismatch: 9, identity: 0.735

agcaaaaaacaatgccaaaaagatgaa----tgagatt	CRISPR spacer
gcaaaaaaacaatggcaaaaagaggaactattga----	Protospacer
.  *********** ******** ***    ***

326. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to KX349232 (Synechococcus phage S-RIM2 isolate LIS_09_1010, complete genome) position: , mismatch: 9, identity: 0.735

agcaaaaaacaatgccaaaaagatgaa----tgagatt	CRISPR spacer
gcaaaaaaacaatggcaaaaagaggaactattga----	Protospacer
.  *********** ******** ***    ***

327. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to KX349263 (Synechococcus phage S-RIM2 isolate RW_14_1112, complete genome) position: , mismatch: 9, identity: 0.735

agcaaaaaacaatgccaaaaagatgaa----tgagatt	CRISPR spacer
gcaaaaaaacaatggcaaaaagaggaactattga----	Protospacer
.  *********** ******** ***    ***

328. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to NC_020859 (Synechococcus phage S-RIM2 R1_1999, complete genome) position: , mismatch: 9, identity: 0.735

agcaaaaaacaatgccaaaaagatgaa----tgagatt	CRISPR spacer
gcaaaaaaacaatggcaaaaagaggaactattga----	Protospacer
.  *********** ******** ***    ***

329. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to KX349257 (Synechococcus phage S-RIM2 isolate RW_02_0709, complete genome) position: , mismatch: 9, identity: 0.735

agcaaaaaacaatgccaaaaagatgaa----tgagatt	CRISPR spacer
gcaaaaaaacaatggcaaaaagaggaactattga----	Protospacer
.  *********** ******** ***    ***

330. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to HQ317290 (Synechococcus phage S-RIM2 R21_2007, complete genome) position: , mismatch: 9, identity: 0.735

agcaaaaaacaatgccaaaaagatgaa----tgagatt	CRISPR spacer
gcaaaaaaacaatggcaaaaagaggaactattga----	Protospacer
.  *********** ******** ***    ***

331. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to KX349279 (Synechococcus phage S-RIM2 isolate W1_16_0709, complete genome) position: , mismatch: 9, identity: 0.735

agcaaaaaacaatgccaaaaagatgaa----tgagatt	CRISPR spacer
gcaaaaaaacaatggcaaaaagaggaactattga----	Protospacer
.  *********** ******** ***    ***

332. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to KX349262 (Synechococcus phage S-RIM2 isolate RW_12_0709, complete genome) position: , mismatch: 9, identity: 0.735

agcaaaaaacaatgccaaaaagatgaa----tgagatt	CRISPR spacer
gcaaaaaaacaatggcaaaaagaggaactattga----	Protospacer
.  *********** ******** ***    ***

333. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to KX349277 (Synechococcus phage S-RIM2 isolate W1_12_0909, complete genome) position: , mismatch: 9, identity: 0.735

agcaaaaaacaatgccaaaaagatgaa----tgagatt	CRISPR spacer
gcaaaaaaacaatggcaaaaagaggaactattga----	Protospacer
.  *********** ******** ***    ***

334. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to KX349238 (Synechococcus phage S-RIM2 isolate Np_01_1112, complete genome) position: , mismatch: 9, identity: 0.735

agcaaaaaacaatgccaaaaagatgaa----tgagatt	CRISPR spacer
gcaaaaaaacaatggcaaaaagaggaactattga----	Protospacer
.  *********** ******** ***    ***

335. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to KX349254 (Synechococcus phage S-RIM2 isolate Np_36_1112, complete genome) position: , mismatch: 9, identity: 0.735

agcaaaaaacaatgccaaaaagatgaa----tgagatt	CRISPR spacer
gcaaaaaaacaatggcaaaaagaggaactattga----	Protospacer
.  *********** ******** ***    ***

336. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to KX349242 (Synechococcus phage S-RIM2 isolate Np_06_0912, complete genome) position: , mismatch: 9, identity: 0.735

agcaaaaaacaatgccaaaaagatgaa----tgagatt	CRISPR spacer
gcaaaaaaacaatggcaaaaagaggaactattga----	Protospacer
.  *********** ******** ***    ***

337. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to KX349251 (Synechococcus phage S-RIM2 isolate Np_24_1112, complete genome) position: , mismatch: 9, identity: 0.735

agcaaaaaacaatgccaaaaagatgaa----tgagatt	CRISPR spacer
gcaaaaaaacaatggcaaaaagaggaactattga----	Protospacer
.  *********** ******** ***    ***

338. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to KX349281 (Synechococcus phage S-RIM2 isolate W2_13_0910, complete genome) position: , mismatch: 9, identity: 0.735

agcaaaaaacaatgccaaaaagatgaa----tgagatt	CRISPR spacer
gcaaaaaaacaatggcaaaaagaggaactattga----	Protospacer
.  *********** ******** ***    ***

339. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to KX349247 (Synechococcus phage S-RIM2 isolate Np_15_1112, complete genome) position: , mismatch: 9, identity: 0.735

agcaaaaaacaatgccaaaaagatgaa----tgagatt	CRISPR spacer
gcaaaaaaacaatggcaaaaagaggaactattga----	Protospacer
.  *********** ******** ***    ***

340. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to KX349228 (Synechococcus phage S-RIM2 isolate Fa_24_0709, complete genome) position: , mismatch: 9, identity: 0.735

agcaaaaaacaatgccaaaaagatgaa----tgagatt	CRISPR spacer
gcaaaaaaacaatggcaaaaagaggaactattga----	Protospacer
.  *********** ******** ***    ***

341. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to KX349268 (Synechococcus phage S-RIM2 isolate RW_30_0905, complete genome) position: , mismatch: 9, identity: 0.735

agcaaaaaacaatgccaaaaagatgaa----tgagatt	CRISPR spacer
gcaaaaaaacaatggcaaaaagaggaactattga----	Protospacer
.  *********** ******** ***    ***

342. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to KX349315 (Cyanophage S-RIM12 isolate RW_14_0101, complete genome) position: , mismatch: 9, identity: 0.735

agcaaaaaacaatgccaaaaagatgaa----tgagatt	CRISPR spacer
gcaaaaaaacaatggcaaaaagaggaactattga----	Protospacer
.  *********** ******** ***    ***

343. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to KX349241 (Synechococcus phage S-RIM2 isolate Np_04_1112, complete genome) position: , mismatch: 9, identity: 0.735

agcaaaaaacaatgccaaaaagatgaa----tgagatt	CRISPR spacer
gcaaaaaaacaatggcaaaaagaggaactattga----	Protospacer
.  *********** ******** ***    ***

344. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to KX349317 (Cyanophage S-RIM12 isolate RW_25_0210, complete genome) position: , mismatch: 9, identity: 0.735

agcaaaaaacaatgccaaaaagatgaa----tgagatt	CRISPR spacer
gcaaaaaaacaatggcaaaaagaggaactattga----	Protospacer
.  *********** ******** ***    ***

345. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to KX349276 (Synechococcus phage S-RIM2 isolate W1_09_0709, complete genome) position: , mismatch: 9, identity: 0.735

agcaaaaaacaatgccaaaaagatgaa----tgagatt	CRISPR spacer
gcaaaaaaacaatggcaaaaagaggaactattga----	Protospacer
.  *********** ******** ***    ***

346. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to KX349311 (Cyanophage S-RIM12 isolate RW_04_0310, complete genome) position: , mismatch: 9, identity: 0.735

agcaaaaaacaatgccaaaaagatgaa----tgagatt	CRISPR spacer
gcaaaaaaacaatggcaaaaagaggaactattga----	Protospacer
.  *********** ******** ***    ***

347. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to KX349264 (Synechococcus phage S-RIM2 isolate RW_16_0905, complete genome) position: , mismatch: 9, identity: 0.735

agcaaaaaacaatgccaaaaagatgaa----tgagatt	CRISPR spacer
gcaaaaaaacaatggcaaaaagaggaactattga----	Protospacer
.  *********** ******** ***    ***

348. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to KX349323 (Cyanophage S-RIM12 isolate W1_08_0910, complete genome) position: , mismatch: 9, identity: 0.735

agcaaaaaacaatgccaaaaagatgaa----tgagatt	CRISPR spacer
gcaaaaaaacaatggcaaaaagaggaactattga----	Protospacer
.  *********** ******** ***    ***

349. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to KX349313 (Cyanophage S-RIM12 isolate RW_06_0310, complete genome) position: , mismatch: 9, identity: 0.735

agcaaaaaacaatgccaaaaagatgaa----tgagatt	CRISPR spacer
gcaaaaaaacaatggcaaaaagaggaactattga----	Protospacer
.  *********** ******** ***    ***

350. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to KX349245 (Synechococcus phage S-RIM2 isolate Np_14_0912, complete genome) position: , mismatch: 9, identity: 0.735

agcaaaaaacaatgccaaaaagatgaa----tgagatt	CRISPR spacer
gcaaaaaaacaatggcaaaaagaggaactattga----	Protospacer
.  *********** ******** ***    ***

351. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to KX349248 (Synechococcus phage S-RIM2 isolate Np_19_1112, complete genome) position: , mismatch: 9, identity: 0.735

agcaaaaaacaatgccaaaaagatgaa----tgagatt	CRISPR spacer
gcaaaaaaacaatggcaaaaagaggaactattga----	Protospacer
.  *********** ******** ***    ***

352. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to KX349272 (Synechococcus phage S-RIM2 isolate W1_01_0709, complete genome) position: , mismatch: 9, identity: 0.735

agcaaaaaacaatgccaaaaagatgaa----tgagatt	CRISPR spacer
gcaaaaaaacaatggcaaaaagaggaactattga----	Protospacer
.  *********** ******** ***    ***

353. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to KX349235 (Synechococcus phage S-RIM2 isolate LIS_14_1013, complete genome) position: , mismatch: 9, identity: 0.735

agcaaaaaacaatgccaaaaagatgaa----tgagatt	CRISPR spacer
gcaaaaaaacaatggcaaaaagaggaactattga----	Protospacer
.  *********** ******** ***    ***

354. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to NC_015285 (Prochlorococcus phage Syn33, complete genome) position: , mismatch: 9, identity: 0.735

agcaaaaaacaatgccaaaaagatgaa----tgagatt	CRISPR spacer
gcaaaaaaacaatggcaaaaagaggaactattga----	Protospacer
.  *********** ******** ***    ***

355. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to KX349283 (Synechococcus phage S-RIM2 isolate W2_32_0910, complete genome) position: , mismatch: 9, identity: 0.735

agcaaaaaacaatgccaaaaagatgaa----tgagatt	CRISPR spacer
gcaaaaaaacaatggcaaaaagaggaactattga----	Protospacer
.  *********** ******** ***    ***

356. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to KX349230 (Synechococcus phage S-RIM2 isolate LIS_02_1013, complete genome) position: , mismatch: 9, identity: 0.735

agcaaaaaacaatgccaaaaagatgaa----tgagatt	CRISPR spacer
gcaaaaaaacaatggcaaaaagaggaactattga----	Protospacer
.  *********** ******** ***    ***

357. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to KX349309 (Cyanophage S-RIM12 isolate Np_22_1112, complete genome) position: , mismatch: 9, identity: 0.735

agcaaaaaacaatgccaaaaagatgaa----tgagatt	CRISPR spacer
gcaaaaaaacaatggcaaaaagaggaactattga----	Protospacer
.  *********** ******** ***    ***

358. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to KX349246 (Synechococcus phage S-RIM2 isolate Np_15_0709, complete genome) position: , mismatch: 9, identity: 0.735

agcaaaaaacaatgccaaaaagatgaa----tgagatt	CRISPR spacer
gcaaaaaaacaatggcaaaaagaggaactattga----	Protospacer
.  *********** ******** ***    ***

359. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to KX349237 (Synechococcus phage S-RIM2 isolate Np_01_0709, complete genome) position: , mismatch: 9, identity: 0.735

agcaaaaaacaatgccaaaaagatgaa----tgagatt	CRISPR spacer
gcaaaaaaacaatggcaaaaagaggaactattga----	Protospacer
.  *********** ******** ***    ***

360. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to KX349319 (Cyanophage S-RIM12 isolate RW_28_1109, complete genome) position: , mismatch: 9, identity: 0.735

agcaaaaaacaatgccaaaaagatgaa----tgagatt	CRISPR spacer
gcaaaaaaacaatggcaaaaagaggaactattga----	Protospacer
.  *********** ******** ***    ***

361. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to KX349307 (Cyanophage S-RIM12 isolate Np_14_0310, complete genome) position: , mismatch: 9, identity: 0.735

agcaaaaaacaatgccaaaaagatgaa----tgagatt	CRISPR spacer
gcaaaaaaacaatggcaaaaagaggaactattga----	Protospacer
.  *********** ******** ***    ***

362. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to KX349318 (Cyanophage S-RIM12 isolate RW_27_0310, complete genome) position: , mismatch: 9, identity: 0.735

agcaaaaaacaatgccaaaaagatgaa----tgagatt	CRISPR spacer
gcaaaaaaacaatggcaaaaagaggaactattga----	Protospacer
.  *********** ******** ***    ***

363. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to KX349278 (Synechococcus phage S-RIM2 isolate W1_13_0709, complete genome) position: , mismatch: 9, identity: 0.735

agcaaaaaacaatgccaaaaagatgaa----tgagatt	CRISPR spacer
gcaaaaaaacaatggcaaaaagaggaactattga----	Protospacer
.  *********** ******** ***    ***

364. spacer 3.12|1582034|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to NC_017401 (Borreliella burgdorferi N40 plasmid N40_cp26, complete sequence) position: , mismatch: 9, identity: 0.735

taatctaaga------gcaatatctgaccaaatagtagaa	CRISPR spacer
------aggagcttatgcaatatctgacctaatagcagaa	Protospacer
      *.**      ************* *****.****

365. spacer 3.3|1581442|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP053657 (Bacillus cereus strain CTMA_1571 plasmid p.1, complete sequence) position: , mismatch: 10, identity: 0.706

taaccaaaattacttaaattttgataagaatagc	CRISPR spacer
tgatgttaattacttaaattttgtaaagaatctg	Protospacer
*.*.   ****************  ******

366. spacer 3.9|1581837|34|NC_019042|CRISPRCasFinder,CRT,PILER-CR matches to MH616963 (CrAssphage sp. isolate ctbg_1, complete genome) position: , mismatch: 10, identity: 0.706

agcaaaaaacaatgccaaaaagatgaatgagatt	CRISPR spacer
gaacaaaaacaataccaaaaagattaatagcata	Protospacer
..  *********.********** ***.. **

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

33946 : 44334

Microbacterium_phage(16.67%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_015057181.1\|33946_37672_+	phosphoribosylformylglycinamidine synthase	A6N228	Microbacterium_phage	1.7e-34	25.6
WP_015057182.1\|37765_39217_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	7.2e-58	34.0
WP_003062570.1\|39369_40398_+	phosphoribosylformylglycinamidine cyclo-ligase	A0A1D7SE90	Cyanophage	3.7e-64	43.6
WP_003056410.1\|40390_40945_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	3.8e-23	34.1
WP_015057184.1\|41051_41564_+	VanZ family protein	NA	NA	NA	NA
WP_015057185.1\|41582_43127_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	Q58MG4	Prochlorococcus_phage	4.3e-77	49.1
WP_003055557.1\|43206_44334_-	SH3 domain-containing protein	F8HGP2	Streptococcus_phage	9.1e-08	28.6

DBSCAN-SWA_2

215368 : 279439

Planktothrix_phage(14.29%)

transposase,integrase,protease,tRNA

attL 257145:257161|attR 287667:287683

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003057862.1\|215368_215812_+\|tRNA	D-tyrosyl-tRNA(Tyr) deacylase	NA	NA	NA	NA
WP_015057254.1\|215909_217232_-	streptokinase	NA	NA	NA	NA
WP_041781478.1\|217559_218408_+	PucR family transcriptional regulator	NA	NA	NA	NA
WP_003057915.1\|218706_219840_+	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	G9BWD6	Planktothrix_phage	2.1e-20	31.8
WP_022554186.1\|219921_221535_+	alpha-glucosidase	NA	NA	NA	NA
WP_015057257.1\|221700_225324_+	pullulanase	NA	NA	NA	NA
WP_003057858.1\|225476_225767_-	hypothetical protein	Q938I9	Temperate_phage	5.0e-11	47.1
WP_003057937.1\|225922_226273_+	conjugal transfer protein TraF	NA	NA	NA	NA
WP_015057260.1\|226379_226739_+	preprotein translocase subunit YajC	NA	NA	NA	NA
WP_015057262.1\|226966_227716_+	isoprenyl transferase	R9W0U9	Flavobacterium_phage	1.5e-22	43.2
WP_015057263.1\|227728_228523_+	phosphatidate cytidylyltransferase	NA	NA	NA	NA
WP_015057264.1\|228620_229880_+\|protease	RIP metalloprotease RseP	NA	NA	NA	NA
WP_015057265.1\|230070_231927_+\|tRNA	proline--tRNA ligase	NA	NA	NA	NA
WP_015057266.1\|231979_232537_+	nucleotidyltransferase family protein	NA	NA	NA	NA
WP_015057267.1\|232653_237051_+	PolC-type DNA polymerase III	A0A0A7RWA3	Clostridium_phage	1.7e-17	35.3
WP_003057923.1\|237216_237645_+	MarR family transcriptional regulator	NA	NA	NA	NA
WP_003057874.1\|237730_238282_+	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA
WP_015057269.1\|238349_238964_-	peptide deformylase	A0A2I7S809	Vibrio_phage	3.9e-13	36.9
WP_015057270.1\|239263_239929_-	cyclic nucleotide-binding domain-containing protein	NA	NA	NA	NA
WP_015057271.1\|240019_241201_+	MFS transporter	NA	NA	NA	NA
WP_003046456.1\|241348_241618_+	30S ribosomal protein S15	NA	NA	NA	NA
WP_015057275.1\|241970_244031_+	BglG family transcription antiterminator	NA	NA	NA	NA
WP_002982644.1\|244023_244308_+	PTS sugar transporter subunit IIB	NA	NA	NA	NA
WP_015057276.1\|244334_245714_+	PTS ascorbate transporter subunit IIC	NA	NA	NA	NA
WP_015057277.1\|245726_246455_+	transaldolase	M4SLG0	Cyanophage	3.2e-14	31.2
WP_015057278.1\|246735_248880_+	polyribonucleotide nucleotidyltransferase	NA	NA	NA	NA
WP_015057279.1\|248872_249625_+	SseB family protein	NA	NA	NA	NA
WP_015057280.1\|249633_250218_+	serine O-acetyltransferase	NA	NA	NA	NA
WP_003062212.1\|250468_250699_+	hypothetical protein	NA	NA	NA	NA
WP_015057281.1\|250726_252070_+\|tRNA	cysteine--tRNA ligase	A0A1V0SAQ2	Catovirus	1.1e-52	30.5
WP_003061211.1\|252062_252464_+	Mini-ribonuclease 3	NA	NA	NA	NA
WP_015057283.1\|252906_253611_+	FUSC family protein	NA	NA	NA	NA
WP_003059560.1\|254853_255600_+	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	NA	NA	NA	NA
WP_003049554.1\|255603_256122_+	NYN domain-containing protein	NA	NA	NA	NA
WP_003059562.1\|256220_257081_+	DegV family protein	A0A0N9SI50	Staphylococcus_phage	2.2e-09	32.8
257145:257161	attL	NA	NA	NA	NA
WP_015057286.1\|257215_257914_+	hypothetical protein	NA	NA	NA	NA
WP_002982695.1\|257910_258117_+	helix-turn-helix transcriptional regulator	A0A1V0E021	Clostridioides_phage	2.3e-10	56.1
WP_142325587.1\|258253_259222_+\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	1.6e-37	32.8
WP_015057288.1\|259291_260317_-\|transposase	IS30 family transposase	H7BWC8	unidentified_phage	1.0e-34	31.8
WP_002982710.1\|260599_261046_+	50S ribosomal protein L13	NA	NA	NA	NA
WP_002982716.1\|261066_261459_+	30S ribosomal protein S9	NA	NA	NA	NA
WP_015057289.1\|261569_262787_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_015057290.1\|262857_263118_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_015057291.1\|263177_264206_-	replication initiation factor domain-containing protein	NA	NA	NA	NA
WP_015057292.1\|264208_264631_-	hypothetical protein	NA	NA	NA	NA
WP_015057293.1\|264912_265356_-	hypothetical protein	NA	NA	NA	NA
WP_015057294.1\|265507_266083_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_015057295.1\|266434_266590_+	type A2 lantipeptide	NA	NA	NA	NA
WP_015057296.1\|266673_269508_+	type 2 lantipeptide synthetase LanM	NA	NA	NA	NA
WP_015057297.1\|269485_271630_+	peptidase domain-containing ABC transporter	W8CYL7	Bacillus_phage	5.3e-25	25.0
WP_015057298.1\|271626_272364_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.3e-28	37.1
WP_015057301.1\|274310_275873_+	hypothetical protein	NA	NA	NA	NA
WP_015057302.1\|275853_276459_+	response regulator transcription factor	NA	NA	NA	NA
WP_015057303.1\|276669_277926_-\|transposase	ISL3 family transposase	A0A1S5SBP9	Streptococcus_phage	6.3e-127	56.0
WP_015057304.1\|278067_278343_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_041781483.1\|278329_278698_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_080554381.1\|279076_279439_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
287667:287683	attR	NA	NA	NA	NA

DBSCAN-SWA_3

422581 : 433885

Streptococcus_phage(83.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003058688.1\|422581_423346_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	9.5e-17	28.3
WP_170172086.1\|423351_424056_+	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	1.8e-17	28.4
WP_003058678.1\|424100_424763_+	CBS domain-containing protein	M1NSC5	Streptococcus_phage	1.2e-60	57.4
WP_003058667.1\|424849_425485_+	dTMP kinase	M1PSC7	Streptococcus_phage	6.8e-69	65.9
WP_003058651.1\|425500_426373_+	DNA polymerase III subunit delta'	M1NSC1	Streptococcus_phage	5.9e-55	41.4
WP_003058683.1\|426369_427170_+	signal peptidase II	NA	NA	NA	NA
WP_003058686.1\|427162_427486_+	DNA replication initiation control protein YabA	M1PFV3	Streptococcus_phage	7.0e-30	64.2
WP_003058668.1\|427490_428354_+	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	M1PLC5	Streptococcus_phage	3.5e-116	76.0
WP_003058684.1\|428380_428773_+	hypothetical protein	NA	NA	NA	NA
WP_003058655.1\|428819_429449_-	copper homeostasis protein CutC	NA	NA	NA	NA
WP_015057358.1\|429565_430657_+	3-phosphoserine/phosphohydroxythreonine transaminase	M1Q1P2	Streptococcus_phage	7.7e-129	62.8
WP_003058661.1\|430682_431234_+	GNAT family N-acetyltransferase	M1PSC3	Streptococcus_phage	2.7e-50	54.1
WP_003058665.1\|431294_431792_+	methylated-DNA--[protein]-cysteine S-methyltransferase	M1PFU9	Streptococcus_phage	1.4e-40	52.9
WP_003058672.1\|431788_432145_+	arsenate reductase family protein	M1PLC0	Streptococcus_phage	1.8e-39	65.0
WP_003058659.1\|432196_432505_-	VOC family protein	NA	NA	NA	NA
WP_003058670.1\|432506_432896_-	glyoxalase/bleomycin resistance/extradiol dioxygenase family protein	NA	NA	NA	NA
WP_003058681.1\|433057_433885_-	exodeoxyribonuclease III	M1PSC0	Streptococcus_phage	6.4e-128	78.8

DBSCAN-SWA_4

446095 : 496951

Mycobacterium_phage(18.18%)

transposase,bacteriocin,protease,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003055633.1\|446095_448093_+\|tRNA	methionine--tRNA ligase	A0A1V0SHR2	Klosneuvirus	1.0e-86	35.7
WP_003055629.1\|448625_449639_+	class 1b ribonucleoside-diphosphate reductase subunit beta	R4TBI6	Mycobacterium_phage	2.9e-98	53.4
WP_014612066.1\|449642_450116_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	F8WQ19	Bacillus_phage	9.7e-12	37.3
WP_015057363.1\|450099_452286_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	A8E2R1	Enterococcus_phage	9.9e-168	43.1
WP_015057364.1\|452583_453918_+	branched-chain amino acid transport system II carrier protein	NA	NA	NA	NA
WP_015057365.1\|454316_454670_+	hypothetical protein	NA	NA	NA	NA
WP_003054401.1\|455018_455255_+	DUF2829 domain-containing protein	NA	NA	NA	NA
WP_003054338.1\|455247_455946_+	3-oxoacyl-ACP reductase	NA	NA	NA	NA
WP_003054367.1\|455942_456185_+	DUF3977 family protein	NA	NA	NA	NA
WP_014612070.1\|456202_456652_+	ASCH domain-containing protein	NA	NA	NA	NA
WP_003054341.1\|456653_457613_+	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
WP_003054334.1\|457946_459284_+	MFS transporter	NA	NA	NA	NA
WP_003061627.1\|459402_460785_+	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	A0A2K9L4K9	Tupanvirus	1.6e-30	35.6
WP_003054386.1\|460815_461370_+	NUDIX hydrolase	NA	NA	NA	NA
WP_003054365.1\|461370_461622_+	hypothetical protein	NA	NA	NA	NA
WP_015057367.1\|461639_462335_+	5'-methylthioadenosine/adenosylhomocysteine nucleosidase	NA	NA	NA	NA
WP_003054353.1\|462407_463055_-	metal-dependent transcriptional regulator	NA	NA	NA	NA
WP_003054333.1\|463200_464133_+	metal ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_003054363.1\|464197_464923_+	metal ABC transporter ATP-binding protein	A0A1V0SE00	Indivirus	8.1e-18	31.8
WP_003054335.1\|464923_465772_+	metal ABC transporter permease	NA	NA	NA	NA
WP_003054349.1\|465902_466709_-	peptidylprolyl isomerase	A0A2H4UTF4	Bodo_saltans_virus	2.1e-22	37.8
WP_037587270.1\|466926_469335_+	DNA translocase FtsK	S5VNE3	Mycobacterium_phage	2.5e-87	51.1
WP_012766635.1\|469403_469757_-	DUF3397 domain-containing protein	NA	NA	NA	NA
WP_003049875.1\|469999_470425_+	50S ribosomal protein L11	NA	NA	NA	NA
WP_003049876.1\|470530_471220_+	50S ribosomal protein L1	NA	NA	NA	NA
WP_003054374.1\|471677_471845_-	hypothetical protein	NA	NA	NA	NA
WP_003049878.1\|472112_472841_+	UMP kinase	NA	NA	NA	NA
WP_003054381.1\|472869_473427_+	ribosome recycling factor	NA	NA	NA	NA
WP_015057368.1\|473546_474404_+	S1 RNA-binding domain-containing protein	NA	NA	NA	NA
WP_015057369.1\|474476_474986_+	peptide-methionine (S)-S-oxide reductase MsrA	NA	NA	NA	NA
WP_003060598.1\|474982_475198_+	YozE family protein	NA	NA	NA	NA
WP_015057370.1\|475336_476521_+	LysM peptidoglycan-binding domain-containing protein	A0A0E3XB61	Gordonia_phage	2.8e-15	38.7
WP_015057371.1\|476831_478604_+	oleate hydratase	NA	NA	NA	NA
WP_015057372.1\|478764_479826_+	PhoH family protein	W8D063	Erwinia_phage	7.1e-47	48.6
WP_015057373.1\|479872_480448_+	uracil-DNA glycosylase family protein	NA	NA	NA	NA
WP_003054373.1\|480606_481104_+	rRNA maturation RNase YbeY	NA	NA	NA	NA
WP_003054389.1\|481084_481492_+	diacylglycerol kinase	NA	NA	NA	NA
WP_012766643.1\|481612_482509_+	GTPase Era	NA	NA	NA	NA
WP_015057375.1\|482832_484239_-	ATP-binding cassette domain-containing protein	F2Y2R6	Organic_Lake_phycodnavirus	5.6e-15	27.6
WP_003062179.1\|484542_484770_+	hypothetical protein	NA	NA	NA	NA
WP_002994587.1\|484818_485136_+	hypothetical protein	NA	NA	NA	NA
WP_003054359.1\|485543_485783_+\|bacteriocin	bacteriocin	NA	NA	NA	NA
WP_003054392.1\|485796_485982_+	hypothetical protein	NA	NA	NA	NA
WP_015057380.1\|487757_488507_+	response regulator transcription factor	NA	NA	NA	NA
WP_015057381.1\|488507_489842_+	GHKL domain-containing protein	NA	NA	NA	NA
WP_011017462.1\|489989_490115_-\|bacteriocin	ComC/BlpC family leader-containing pheromone/bacteriocin	NA	NA	NA	NA
WP_015057382.1\|490191_491556_-\|bacteriocin	bacteriocin secretion accessory protein	NA	NA	NA	NA
WP_015057385.1\|494000_494225_+\|bacteriocin	ComC/BlpC family leader-containing pheromone/bacteriocin	NA	NA	NA	NA
WP_015057386.1\|494247_494580_+	hypothetical protein	NA	NA	NA	NA
WP_003059989.1\|494649_495513_+\|transposase	IS982 family transposase	NA	NA	NA	NA
WP_015057387.1\|495770_496181_+	hypothetical protein	NA	NA	NA	NA
WP_080147981.1\|496648_496951_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA

DBSCAN-SWA_5

1074154 : 1130843

Bacillus_virus(16.67%)

transposase,bacteriocin,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_015057614.1\|1074154_1075615_-\|transposase	IS1182 family transposase	A0A1X9I5T2	Streptococcus_phage	7.8e-254	91.3
WP_003057625.1\|1075920_1077126_-	30S ribosomal protein S1	NA	NA	NA	NA
WP_015057615.1\|1077514_1077745_-	DUF2969 domain-containing protein	NA	NA	NA	NA
WP_015057616.1\|1077808_1078831_-	branched-chain amino acid aminotransferase	NA	NA	NA	NA
WP_015057617.1\|1079032_1080043_+\|transposase	IS30 family transposase	H7BVY4	unidentified_phage	6.0e-35	32.2
WP_015057618.1\|1080039_1082499_-	DNA topoisomerase IV subunit A	G3M9Z5	Bacillus_virus	2.1e-94	32.6
WP_012767067.1\|1082695_1083514_-	hypothetical protein	NA	NA	NA	NA
WP_003059704.1\|1083580_1085530_-	DNA topoisomerase IV subunit B	G3M9Z3	Bacillus_virus	1.2e-121	41.7
WP_014612314.1\|1085664_1086306_+	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA
WP_015057619.1\|1086365_1087637_-	dihydroorotase	NA	NA	NA	NA
WP_015057620.1\|1087760_1088414_-	uracil-DNA glycosylase	A0A0N9QWR4	Chrysochromulina_ericina_virus	4.7e-33	39.0
WP_003057640.1\|1088546_1089197_-	amino acid ABC transporter permease	NA	NA	NA	NA
WP_015057621.1\|1089225_1090089_-	transporter substrate-binding domain-containing protein	NA	NA	NA	NA
WP_003060129.1\|1090207_1091662_-	amidase	NA	NA	NA	NA
WP_015057622.1\|1091840_1092539_-\|transposase	IS3 family transposase	A0A2I6AZV9	Macacine_betaherpesvirus	1.9e-40	51.8
WP_003053721.1\|1092608_1093355_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_003060988.1\|1093395_1094025_-	orotate phosphoribosyltransferase	Q58MW1	Prochlorococcus_phage	1.4e-05	34.1
WP_003053723.1\|1094085_1094778_-	orotidine-5'-phosphate decarboxylase	NA	NA	NA	NA
WP_012767079.1\|1094989_1095538_-	hypothetical protein	NA	NA	NA	NA
WP_003059838.1\|1095761_1096679_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_003053701.1\|1096760_1097531_-	hypothetical protein	NA	NA	NA	NA
WP_003053699.1\|1097523_1098237_-	purine-nucleoside phosphorylase	NA	NA	NA	NA
WP_015057623.1\|1098788_1099598_-	purine-nucleoside phosphorylase	NA	NA	NA	NA
WP_015057624.1\|1099581_1100022_-	arsenate reductase (glutaredoxin)	A0A2H4J8T1	uncultured_Caudovirales_phage	1.7e-34	54.5
WP_015057625.1\|1100040_1101252_-	phosphopentomutase	NA	NA	NA	NA
WP_003060751.1\|1101330_1102014_-	ribose-5-phosphate isomerase RpiA	NA	NA	NA	NA
WP_015057626.1\|1102155_1103532_+\|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE	NA	NA	NA	NA
WP_015057627.1\|1103599_1105009_-	dipeptidase PepV	NA	NA	NA	NA
WP_003054310.1\|1105186_1105789_-	nitroreductase family protein	NA	NA	NA	NA
WP_015057628.1\|1106101_1106245_+	pyruvate oxidase	NA	NA	NA	NA
WP_041781578.1\|1106245_1106446_+	hypothetical protein	NA	NA	NA	NA
WP_003054306.1\|1107136_1107316_+	pyruvate oxidase	NA	NA	NA	NA
WP_015057631.1\|1107343_1107760_+	pyruvate oxidase	NA	NA	NA	NA
WP_015057632.1\|1107812_1109597_-	excinuclease ABC subunit UvrC	NA	NA	NA	NA
WP_003054304.1\|1109726_1109876_-	hypothetical protein	NA	NA	NA	NA
WP_003054296.1\|1109931_1111308_-	NAD-dependent succinate-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_015057633.1\|1111385_1112093_-	noncanonical pyrimidine nucleotidase, YjjG family	NA	NA	NA	NA
WP_015057634.1\|1112262_1112583_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_015057635.1\|1112644_1113640_+	permease	NA	NA	NA	NA
WP_003051110.1\|1113649_1113907_+	thioredoxin family protein	NA	NA	NA	NA
WP_015057636.1\|1114194_1114761_-	sugar O-acetyltransferase	NA	NA	NA	NA
WP_003058422.1\|1114776_1115451_-	HAD family phosphatase	A0A1D8KNV9	Synechococcus_phage	1.5e-10	27.0
WP_003058426.1\|1115569_1116076_-	YkgJ family cysteine cluster protein	NA	NA	NA	NA
WP_015057637.1\|1116171_1117221_-	extracellular solute-binding protein	NA	NA	NA	NA
WP_015057638.1\|1117207_1118002_-	AraC family transcriptional regulator	NA	NA	NA	NA
WP_015057639.1\|1118005_1119655_-	sensor histidine kinase	NA	NA	NA	NA
WP_015057640.1\|1119800_1120628_-	PTS mannose/fructose/sorbose transporter family subunit IID	NA	NA	NA	NA
WP_015057641.1\|1120624_1121434_-	PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC	NA	NA	NA	NA
WP_003058434.1\|1121450_1121942_-	PTS system mannose/fructose/N-acetylgalactosamine-transporter subunit IIB	NA	NA	NA	NA
WP_003058453.1\|1121961_1122387_-	PTS mannose transporter subunit IIA	NA	NA	NA	NA
WP_015057642.1\|1122593_1123613_-	YeiH family putative sulfate export transporter	NA	NA	NA	NA
WP_015057643.1\|1123723_1124893_-	DUF2974 domain-containing protein	NA	NA	NA	NA
WP_003058441.1\|1125082_1125379_-\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
WP_015057644.1\|1125378_1125609_-\|bacteriocin	bacteriocin ubericin-A	NA	NA	NA	NA
WP_014612329.1\|1126479_1126917_-	peptide-methionine (R)-S-oxide reductase MsrB	NA	NA	NA	NA
WP_014612330.1\|1127091_1128924_-	elongation factor 4	A0A2K9L2P9	Tupanvirus	2.2e-19	41.0
WP_003060137.1\|1128993_1129452_-	nucleoside-diphosphate kinase	D2E8E1	Anguillid_herpesvirus	4.8e-24	46.3
WP_155115628.1\|1129737_1130843_-\|transposase	IS3 family transposase	A0A2I7SC85	Paenibacillus_phage	3.3e-71	50.6

DBSCAN-SWA_6

1241181 : 1337740

Streptococcus_phage(81.97%)

transposase,portal,head,tail,terminase,holin,protease,capsid

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_111711604.1\|1241181_1242307_+\|transposase	IS3 family transposase	Q8W6R2	Burkholderia_virus	3.4e-15	27.3
WP_015057705.1\|1244955_1245780_-	replication initiator protein A	A0A286QNA4	Streptococcus_phage	4.9e-11	35.5
WP_014612392.1\|1245776_1245950_-	hypothetical protein	NA	NA	NA	NA
WP_014612393.1\|1246161_1247844_-	recombinase family protein	A0A1B1P7M0	Bacillus_phage	2.9e-34	27.3
WP_000368178.1\|1247934_1248096_-	hypothetical protein	NA	NA	NA	NA
WP_000032597.1\|1248584_1248995_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_003059989.1\|1249285_1250149_+\|transposase	IS982 family transposase	NA	NA	NA	NA
WP_015057706.1\|1250233_1251586_-	MATE family efflux transporter	NA	NA	NA	NA
WP_000889914.1\|1251622_1253032_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	9.6e-15	27.0
WP_001208951.1\|1253709_1254291_-	MptD family putative ECF transporter S component	NA	NA	NA	NA
WP_000668731.1\|1254321_1256058_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	5.3e-31	30.0
WP_000726617.1\|1256061_1257975_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	1.1e-37	26.2
WP_000332326.1\|1258091_1258697_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_000013381.1\|1259147_1259504_+	plasmid mobilization relaxosome protein MobC	NA	NA	NA	NA
WP_001018659.1\|1259506_1260838_+	relaxase/mobilization nuclease domain-containing protein	NA	NA	NA	NA
WP_015057708.1\|1260854_1263953_-	DEAD/DEAH box helicase	NA	NA	NA	NA
WP_001176345.1\|1272414_1273950_-	putative DNA binding domain-containing protein	NA	NA	NA	NA
WP_000779859.1\|1274030_1275737_-	DNA topoisomerase 3	A0A2H4UU47	Bodo_saltans_virus	7.3e-17	22.1
WP_155115630.1\|1276252_1277357_+\|transposase	IS3 family transposase	A0A2I7SC85	Paenibacillus_phage	1.1e-71	49.6
WP_015057714.1\|1277615_1280045_-	ATP-binding protein	NA	NA	NA	NA
WP_000332200.1\|1279956_1280346_-	PrgI family protein	E4ZFJ8	Streptococcus_phage	2.8e-49	83.1
WP_001042373.1\|1280349_1280613_-	hypothetical protein	NA	NA	NA	NA
WP_000466905.1\|1280632_1281499_-	hypothetical protein	NA	NA	NA	NA
WP_000394022.1\|1281518_1281734_-	Maff2 family protein	NA	NA	NA	NA
WP_000807046.1\|1281737_1282049_-	hypothetical protein	NA	NA	NA	NA
WP_000565764.1\|1282211_1283996_-	type IV secretory system conjugative DNA transfer family protein	NA	NA	NA	NA
WP_000606556.1\|1283992_1284478_-	PcfB family protein	NA	NA	NA	NA
WP_025194585.1\|1284477_1285515_-	hypothetical protein	W8CYV0	Bacillus_phage	7.8e-22	53.5
WP_001267741.1\|1285592_1285874_-	hypothetical protein	NA	NA	NA	NA
WP_015057716.1\|1286277_1288002_-	DUF262 domain-containing protein	NA	NA	NA	NA
WP_172633795.1\|1288104_1289457_-	recombinase family protein	E4ZFN9	Streptococcus_phage	2.4e-249	94.9
WP_015057718.1\|1289359_1290601_-	recombinase family protein	A0A1X9I6J1	Streptococcus_phage	1.8e-222	93.0
WP_015057719.1\|1290823_1292293_-	N-acetylmuramoyl-L-alanine amidase	A0A1B0RXL4	Streptococcus_phage	3.1e-274	97.3
WP_015057720.1\|1292299_1292695_-\|holin	phage holin family protein	D0R0E9	Streptococcus_phage	2.2e-46	78.6
WP_015057721.1\|1292672_1293041_-	hypothetical protein	A0A1B0RXE8	Streptococcus_phage	6.5e-64	95.1
WP_015057722.1\|1293046_1293253_-	hypothetical protein	A0A1X9I679	Streptococcus_phage	2.5e-25	98.5
WP_015057723.1\|1293265_1297813_-	hypothetical protein	A0A1X9I747	Streptococcus_phage	0.0e+00	93.6
WP_015057724.1\|1297812_1298535_-	hypothetical protein	A0A1X9I6T8	Streptococcus_phage	2.7e-130	96.7
WP_015057727.1\|1301573_1301993_-	hypothetical protein	A0A1B0RXM7	Streptococcus_phage	1.2e-66	92.8
WP_003054960.1\|1302004_1302574_-	hypothetical protein	E4ZFM9	Streptococcus_phage	2.2e-103	98.9
WP_015057728.1\|1302575_1302902_-	hypothetical protein	E4ZFM8	Streptococcus_phage	9.8e-56	98.1
WP_015057729.1\|1302908_1303277_-	hypothetical protein	A0A1B0RXJ7	Streptococcus_phage	3.0e-45	94.3
WP_015057730.1\|1303269_1303608_-\|head,tail	head-tail adaptor protein	M1NSD6	Streptococcus_phage	1.2e-56	94.6
WP_015057731.1\|1303607_1303865_-\|head,tail	phage gp6-like head-tail connector protein	D0R0D7	Streptococcus_phage	2.8e-37	92.9
WP_015057732.1\|1303867_1305073_-\|capsid	phage major capsid protein	D0R0D6	Streptococcus_phage	5.5e-229	99.3
WP_015057733.1\|1305091_1305787_-\|protease	Clp protease ClpP	M1PLE5	Streptococcus_phage	6.2e-124	97.4
WP_015057734.1\|1305779_1307063_-\|portal	phage portal protein	A0A1B0RXD8	Streptococcus_phage	2.1e-247	99.1
WP_015057735.1\|1307120_1307465_-	hypothetical protein	A0A1B0RXK0	Streptococcus_phage	5.5e-57	98.2
WP_015057736.1\|1307601_1307940_-	type II toxin-antitoxin system RelE/ParE family toxin	A0A1B0RXL8	Streptococcus_phage	1.1e-54	98.2
WP_014636336.1\|1307939_1308242_-	type II toxin-antitoxin system RelB/DinJ family antitoxin	A0A1B0RXK3	Streptococcus_phage	1.2e-47	100.0
WP_015057737.1\|1308301_1309894_-\|terminase	terminase large subunit	A0A1B0RXD3	Streptococcus_phage	0.0e+00	99.4
WP_003058374.1\|1309890_1310364_-\|terminase	phage terminase small subunit P27 family	A0A1B0RXI5	Streptococcus_phage	1.6e-86	100.0
WP_015057738.1\|1310646_1310859_-	DUF4314 domain-containing protein	M1PFX9	Streptococcus_phage	2.6e-33	97.1
WP_015057739.1\|1310860_1311109_-	hypothetical protein	A0A1B0RXJ1	Streptococcus_phage	4.4e-40	97.6
WP_015057740.1\|1311181_1312462_-	DNA (cytosine-5-)-methyltransferase	M1NSK8	Streptococcus_phage	9.6e-248	98.8
WP_015057741.1\|1312458_1313715_-	DNA modification methylase	E4ZFL4	Streptococcus_phage	9.5e-240	96.9
WP_015057742.1\|1313686_1314148_-	hypothetical protein	A0A1B0RXC6	Streptococcus_phage	2.3e-87	97.4
WP_015057743.1\|1314446_1314812_-	HNH endonuclease	A0A1X9I6D0	Streptococcus_phage	3.6e-67	94.2
WP_015057744.1\|1314813_1315851_-	methionine adenosyltransferase	Q6DMV3	Streptococcus_phage	5.3e-188	96.2
WP_015057745.1\|1315898_1316081_-	hypothetical protein	A0A1B0RXC3	Streptococcus_phage	6.5e-25	96.7
WP_015057746.1\|1316275_1316752_-	hypothetical protein	D0R0B9	Streptococcus_phage	1.4e-82	98.1
WP_015057747.1\|1316744_1318121_-	DEAD/DEAH box helicase	A0A1B0RXH8	Streptococcus_phage	1.0e-258	97.8
WP_015057748.1\|1318101_1318383_-	VRR-NUC domain-containing protein	A0A1B0RXC4	Streptococcus_phage	1.0e-45	97.8
WP_015057749.1\|1318666_1320952_-	primase C-terminal domain-containing protein	A0A1X9I6B6	Streptococcus_phage	0.0e+00	96.2
WP_015057750.1\|1321351_1321675_+	hypothetical protein	M1PSP3	Streptococcus_phage	1.8e-46	91.3
WP_015057751.1\|1321667_1322789_+	DUF2800 domain-containing protein	M1Q218	Streptococcus_phage	2.2e-208	94.6
WP_041781584.1\|1322769_1323342_+	DUF2815 family protein	A0A1B0RXG7	Streptococcus_phage	1.6e-101	97.4
WP_015057753.1\|1323360_1323528_+	hypothetical protein	A0A1X9I6D2	Streptococcus_phage	1.4e-21	98.2
WP_015057754.1\|1323576_1325532_+	DNA polymerase	A0A1B0RXB4	Streptococcus_phage	0.0e+00	93.4
WP_015057755.1\|1325570_1326140_-	hypothetical protein	A0A1X9I6B5	Streptococcus_phage	6.9e-105	98.9
WP_015057757.1\|1326484_1327639_+	hypothetical protein	Q6DMW7	Streptococcus_phage	2.6e-207	93.8
WP_015057758.1\|1327660_1328941_-	LlaJI family restriction endonuclease	Q6DMW8	Streptococcus_phage	2.2e-236	97.3
WP_155115637.1\|1328921_1330664_-	AAA family ATPase	Q6DMW9	Streptococcus_phage	3.2e-185	85.1
WP_015057760.1\|1330680_1331826_-	DNA cytosine methyltransferase	A0A0R6PHJ5	Moraxella_phage	3.0e-06	25.5
WP_015057761.1\|1331822_1333238_-	DNA cytosine methyltransferase	A0A191SB20	Nostoc_phage	7.9e-17	32.5
WP_015057762.1\|1333408_1333744_+	helix-turn-helix transcriptional regulator	D0R0A5	Streptococcus_phage	1.0e-47	88.3
WP_155115631.1\|1333785_1334891_-\|transposase	IS3 family transposase	A0A2I7SC85	Paenibacillus_phage	1.9e-71	49.6
WP_015057765.1\|1335323_1335551_+	hypothetical protein	D0R0A4	Streptococcus_phage	6.0e-36	98.6
WP_015057766.1\|1335673_1337089_+	Y-family DNA polymerase	M1Q231	Streptococcus_phage	3.4e-270	98.9
WP_015057767.1\|1337085_1337454_+	hypothetical protein	E4ZFJ1	Streptococcus_phage	1.2e-57	93.4
WP_015057768.1\|1337440_1337740_+	hypothetical protein	M1PG86	Streptococcus_phage	1.1e-48	98.0

DBSCAN-SWA_7

1377622 : 1471145

Streptococcus_phage(83.05%)

portal,head,tail,tRNA,terminase,holin,capsid,protease,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003061353.1\|1377622_1378438_+\|protease	PrsW family intramembrane metalloprotease	NA	NA	NA	NA
WP_003062044.1\|1378482_1378755_-	DUF1294 domain-containing protein	NA	NA	NA	NA
WP_003051479.1\|1378815_1379442_-	uridine kinase	A0A1V0SAA3	Catovirus	1.3e-35	39.7
WP_015057797.1\|1379539_1380625_+	DEAD/DEAH box helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	1.4e-34	31.3
WP_003062364.1\|1380903_1382190_-	polysaccharide deacetylase family protein	NA	NA	NA	NA
WP_003061481.1\|1382275_1383703_-	NADP-dependent glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA
WP_015017184.1\|1383869_1385603_-	phosphoenolpyruvate--protein phosphotransferase	NA	NA	NA	NA
WP_002984031.1\|1385607_1385871_-	phosphocarrier protein HPr	NA	NA	NA	NA
WP_003051493.1\|1386255_1386474_+	redoxin NrdH	A0A249XUR7	Enterococcus_phage	6.2e-14	50.7
WP_015057798.1\|1386493_1388653_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	A8E2R1	Enterococcus_phage	3.2e-259	62.6
WP_003054109.1\|1388985_1389945_+	class 1b ribonucleoside-diphosphate reductase subunit beta	A0A096XT60	Enterococcus_phage	2.6e-128	70.5
WP_012767245.1\|1389922_1391281_+	chloride channel protein	NA	NA	NA	NA
WP_014612420.1\|1391316_1392012_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_012767247.1\|1392030_1392792_-	DUF3169 family protein	NA	NA	NA	NA
WP_003054097.1\|1392788_1393004_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_015057799.1\|1393003_1393558_-	DUF3267 domain-containing protein	NA	NA	NA	NA
WP_003061748.1\|1393717_1396336_-\|tRNA	alanine--tRNA ligase	A0A1V0SK38	Klosneuvirus	3.5e-63	34.5
WP_015057800.1\|1396720_1397788_-	peptidylprolyl isomerase PrsA	NA	NA	NA	NA
WP_015057801.1\|1397850_1398558_-	O-methyltransferase	NA	NA	NA	NA
WP_003055587.1\|1398609_1399821_-	OFA family MFS transporter	NA	NA	NA	NA
WP_003055586.1\|1400154_1400778_-	HAD-IA family hydrolase	NA	NA	NA	NA
WP_003055595.1\|1400777_1401320_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_037587517.1\|1401449_1401998_-	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA
WP_012767253.1\|1402184_1403987_-	oligoendopeptidase F	NA	NA	NA	NA
WP_003056374.1\|1403997_1404960_-	competence protein CoiA	NA	NA	NA	NA
WP_003056359.1\|1405071_1406232_-	MFS transporter	NA	NA	NA	NA
WP_015057803.1\|1406323_1407040_-	rRNA pseudouridine synthase	NA	NA	NA	NA
WP_003056370.1\|1407143_1407857_-	glucosamine-6-phosphate deaminase	NA	NA	NA	NA
WP_015057804.1\|1408054_1409083_+\|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	NA	NA	NA	NA
WP_003056368.1\|1409087_1410308_+	DUF3114 domain-containing protein	NA	NA	NA	NA
WP_015057805.1\|1410428_1411490_-	serine hydrolase	NA	NA	NA	NA
WP_015057806.1\|1411656_1412262_-	superoxide dismutase	Q56AR7	Bacillus_thuringiensis_phage	3.5e-59	53.7
WP_015057807.1\|1412351_1413398_-	DNA polymerase III subunit delta	NA	NA	NA	NA
WP_015057808.1\|1413478_1414060_-	MBL fold metallo-hydrolase	M1PSD2	Streptococcus_phage	3.5e-56	59.2
WP_015057809.1\|1414175_1415810_-	DUF2075 domain-containing protein	NA	NA	NA	NA
WP_015057810.1\|1415875_1417438_-	recombinase family protein	Q6DMS5	Streptococcus_phage	1.4e-216	74.2
WP_015057811.1\|1417437_1418673_-	recombinase family protein	M1NSJ1	Streptococcus_phage	3.9e-230	95.9
WP_003054980.1\|1418730_1418892_-	hypothetical protein	M1PSL4	Streptococcus_phage	3.0e-18	88.7
WP_015057812.1\|1418998_1420468_-	N-acetylmuramoyl-L-alanine amidase	A0A1B0RXL4	Streptococcus_phage	6.0e-254	90.4
WP_041781649.1\|1420469_1420874_-\|holin	phage holin family protein	D0R0E9	Streptococcus_phage	2.5e-45	74.0
WP_015057814.1\|1420891_1422748_-\|plate	baseplate structural protein Gp10	Q6DMS9	Streptococcus_phage	4.3e-257	73.3
WP_015057815.1\|1422760_1425676_-\|tail	phage tail protein	Q6DMT0	Streptococcus_phage	0.0e+00	64.4
WP_015057816.1\|1425675_1426401_-	hypothetical protein	M1Q107	Streptococcus_phage	1.4e-81	59.4
WP_015057817.1\|1426397_1429256_-\|tail	phage tail protein	M1NSD5	Streptococcus_phage	2.8e-199	89.9
WP_003054982.1\|1429438_1429858_-	hypothetical protein	D0R0E2	Streptococcus_phage	2.1e-71	100.0
WP_003054960.1\|1429869_1430439_-	hypothetical protein	E4ZFM9	Streptococcus_phage	2.2e-103	98.9
WP_015057728.1\|1430440_1430767_-	hypothetical protein	E4ZFM8	Streptococcus_phage	9.8e-56	98.1
WP_003054952.1\|1430773_1431142_-	hypothetical protein	A0A1X9I688	Streptococcus_phage	2.2e-48	91.0
WP_015057818.1\|1431134_1431473_-\|head,tail	head-tail adaptor protein	A0A1X9I694	Streptococcus_phage	4.9e-58	98.2
WP_003054946.1\|1431472_1431730_-\|head,tail	phage gp6-like head-tail connector protein	D0R0D7	Streptococcus_phage	8.6e-39	97.6
WP_015057819.1\|1431732_1432938_-\|capsid	phage major capsid protein	A0A1X9I692	Streptococcus_phage	7.5e-226	98.0
WP_015057820.1\|1432956_1433652_-\|protease	Clp protease ClpP	A0A1B0RXJ9	Streptococcus_phage	6.2e-116	90.9
WP_015057821.1\|1433644_1434928_-\|portal	phage portal protein	A0A1B0RXD8	Streptococcus_phage	2.2e-223	88.3
WP_015057822.1\|1435008_1435635_-	hypothetical protein	NA	NA	NA	NA
WP_015057823.1\|1435672_1437265_-\|terminase	terminase large subunit	A0A1B0RXJ8	Streptococcus_phage	2.7e-292	90.2
WP_041781650.1\|1437261_1437735_-\|terminase	phage terminase small subunit P27 family	A0A1B0RXG3	Streptococcus_phage	8.0e-83	94.3
WP_015057825.1\|1437797_1438007_-	DUF4314 domain-containing protein	A0A1B0RXD4	Streptococcus_phage	1.1e-15	62.3
WP_015057826.1\|1438010_1438265_-	hypothetical protein	M1PG57	Streptococcus_phage	1.5e-19	59.5
WP_015057827.1\|1438336_1439593_-	DNA (cytosine-5-)-methyltransferase	M1NSK8	Streptococcus_phage	7.3e-232	93.3
WP_015057828.1\|1439589_1440180_-	HNH endonuclease	A0A1B0RXJ4	Streptococcus_phage	2.1e-16	100.0
WP_015057829.1\|1440179_1441433_-	DNA modification methylase	A0A1B0RXJ0	Streptococcus_phage	2.9e-241	97.8
WP_015057830.1\|1441404_1441866_-	hypothetical protein	A0A1B0RXC6	Streptococcus_phage	7.5e-86	96.1
WP_015057832.1\|1442165_1442531_-	HNH endonuclease	A0A1X9I6D0	Streptococcus_phage	1.1e-66	93.4
WP_015057745.1\|1443619_1443802_-	hypothetical protein	A0A1B0RXC3	Streptococcus_phage	6.5e-25	96.7
WP_015057747.1\|1444466_1445843_-	DEAD/DEAH box helicase	A0A1B0RXH8	Streptococcus_phage	1.0e-258	97.8
WP_015057748.1\|1445823_1446105_-	VRR-NUC domain-containing protein	A0A1B0RXC4	Streptococcus_phage	1.0e-45	97.8
WP_015057838.1\|1446388_1448674_-	protein FPV058	A0A1X9I6B6	Streptococcus_phage	0.0e+00	96.5
WP_015057840.1\|1449087_1449411_+	hypothetical protein	M1PSP3	Streptococcus_phage	1.3e-47	93.3
WP_015057841.1\|1449403_1450525_+	DUF2800 domain-containing protein	D0R0B3	Streptococcus_phage	5.0e-208	94.4
WP_015057842.1\|1450529_1451078_+	DUF2815 family protein	A0A1B0RXA9	Streptococcus_phage	1.2e-98	98.4
WP_172633792.1\|1451096_1451264_+	hypothetical protein	E4ZFK2	Streptococcus_phage	5.2e-21	98.1
WP_015057844.1\|1451460_1453416_+	DNA polymerase	A0A1B0RXB4	Streptococcus_phage	0.0e+00	92.8
WP_015057845.1\|1453455_1454061_-	hypothetical protein	Q6DMW6	Streptococcus_phage	8.3e-08	26.2
WP_015057846.1\|1454676_1456551_-	ImmA/IrrE family metallo-endopeptidase	A0A1X9I6C7	Streptococcus_phage	5.4e-215	59.0
WP_015057847.1\|1456645_1457971_-	LlaJI family restriction endonuclease	NA	NA	NA	NA
WP_015057848.1\|1457983_1458952_-	AAA family ATPase	M1NSM1	Streptococcus_phage	9.1e-41	37.1
WP_015057849.1\|1458960_1459827_-	hypothetical protein	NA	NA	NA	NA
WP_015057850.1\|1459836_1461684_-	DNA adenine methylase	A0A1P8BMM5	Lactococcus_phage	1.4e-111	54.7
WP_015057851.1\|1461821_1462511_+	helix-turn-helix transcriptional regulator	M1PG82	Streptococcus_phage	1.5e-109	86.5
WP_015057852.1\|1462513_1462741_+	hypothetical protein	D0R0A4	Streptococcus_phage	6.0e-36	97.3
WP_153309563.1\|1462718_1462859_+	hypothetical protein	Q6DMX3	Streptococcus_phage	2.9e-17	97.8
WP_015057853.1\|1462863_1464279_+	Y-family DNA polymerase	M1Q231	Streptococcus_phage	2.4e-268	97.9
WP_015057854.1\|1464275_1464611_+	hypothetical protein	NA	NA	NA	NA
WP_015057855.1\|1464623_1464992_+	hypothetical protein	M1PLN9	Streptococcus_phage	3.1e-58	95.1
WP_015057856.1\|1464978_1465278_+	hypothetical protein	M1PG86	Streptococcus_phage	2.8e-49	98.0
WP_015057857.1\|1465469_1466933_-	Msr family ABC-F type ribosomal protection protein	A0A2I4R674	Erysipelothrix_phage	1.5e-249	97.1
WP_015057858.1\|1467053_1468268_-	macrolide efflux MFS transporter Mef(A)	A0A2K5B2B5	Erysipelothrix_phage	2.5e-213	99.0
WP_015057859.1\|1468816_1469233_-	hypothetical protein	A0A1B0RXA3	Streptococcus_phage	1.3e-73	100.0
WP_015057860.1\|1469247_1470360_-	recombinase family protein	Q6DMY0	Streptococcus_phage	5.0e-208	99.2
WP_172633793.1\|1470488_1471145_-	hypothetical protein	Q6DMY1	Streptococcus_phage	6.0e-113	92.7

DBSCAN-SWA_8

1550817 : 1606492

Staphylococcus_phage(16.67%)

transposase,integrase,holin,tRNA

attL 1552094:1552108|attR 1599917:1599931

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014612278.1\|1550817_1552047_+\|transposase	IS110 family transposase	Q9JMN8	Wolbachia_phage	3.6e-34	28.3
1552094:1552108	attL	NA	NA	NA	NA
WP_015057894.1\|1552273_1553239_-	substrate-binding domain-containing protein	NA	NA	NA	NA
WP_022554979.1\|1553317_1554259_-	hypothetical protein	NA	NA	NA	NA
WP_015057896.1\|1554260_1555739_-	sugar ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	2.3e-11	25.6
WP_003051896.1\|1555754_1556153_-	D-ribose pyranase	NA	NA	NA	NA
WP_003061715.1\|1556127_1557039_-	ribokinase	NA	NA	NA	NA
WP_003053684.1\|1557031_1558015_-	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_015057897.1\|1558293_1559331_-	PDZ domain-containing protein	NA	NA	NA	NA
WP_003051905.1\|1559317_1559809_-	pantetheine-phosphate adenylyltransferase	A0A1B1IVQ3	uncultured_Mediterranean_phage	6.1e-17	34.2
WP_041781651.1\|1559798_1560338_-	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	NA	NA	NA	NA
WP_003061055.1\|1560531_1561524_-	aspartate--ammonia ligase	A0A1C9C5F0	Heterosigma_akashiwo_virus	2.1e-53	38.9
WP_015057899.1\|1561850_1562801_-	carbamate kinase	NA	NA	NA	NA
WP_015057902.1\|1564439_1565771_-	Sapep family Mn(2+)-dependent dipeptidase	NA	NA	NA	NA
WP_014612467.1\|1565787_1567281_-	YfcC family protein	NA	NA	NA	NA
WP_014612468.1\|1567451_1568465_-	ornithine carbamoyltransferase	NA	NA	NA	NA
WP_012767312.1\|1568588_1568930_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_002983803.1\|1569029_1570265_-	arginine deiminase	NA	NA	NA	NA
WP_003061466.1\|1570540_1571221_-	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA
WP_003057398.1\|1571362_1571836_+	arginine repressor	NA	NA	NA	NA
WP_015057903.1\|1572013_1572730_-	B3/4 domain-containing protein	NA	NA	NA	NA
WP_015057904.1\|1572743_1573823_-	MmcQ/YjbR family DNA-binding protein	NA	NA	NA	NA
WP_015057905.1\|1573895_1575629_-	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	7.9e-27	34.1
WP_014612471.1\|1575625_1576366_-	response regulator	Q6XM27	Feldmannia_irregularis_virus	8.0e-05	32.4
WP_003055983.1\|1576453_1577560_-	peptide-methionine (R)-S-oxide reductase MsrB	NA	NA	NA	NA
WP_003055993.1\|1577602_1578226_-	TlpA family protein disulfide reductase	NA	NA	NA	NA
WP_003055974.1\|1578238_1578949_-	thiol-disulfide oxidoreductase-associated membrane protein CcdA2	NA	NA	NA	NA
WP_003055981.1\|1579168_1580101_-	magnesium transporter CorA family protein	NA	NA	NA	NA
WP_015057907.1\|1580192_1581152_-	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
WP_003044506.1\|1582380_1582674_-	CRISPR-associated endonuclease Cas2	NA	NA	NA	NA
WP_015057908.1\|1582684_1583710_-	type I-C CRISPR-associated endonuclease Cas1	NA	NA	NA	NA
WP_015057909.1\|1583706_1584381_-	CRISPR-associated protein Cas4	NA	NA	NA	NA
WP_015057910.1\|1584382_1585231_-	type I-C CRISPR-associated protein Cas7/Csd2	NA	NA	NA	NA
WP_015057911.1\|1585235_1587131_-	type I-C CRISPR-associated protein Cas8c/Csd1	NA	NA	NA	NA
WP_015057912.1\|1587130_1587859_-	type I-C CRISPR-associated protein Cas5	NA	NA	NA	NA
WP_015057913.1\|1587991_1590418_-	CRISPR-associated helicase/endonuclease Cas3	NA	NA	NA	NA
WP_015057915.1\|1590594_1591728_-\|transposase	ISAs1-like element IS1548 family transposase	NA	NA	NA	NA
WP_015057916.1\|1592010_1594659_-\|tRNA	valine--tRNA ligase	A0A1V0S951	Catovirus	1.1e-149	40.2
WP_003062442.1\|1594660_1595224_-	AAA family ATPase	NA	NA	NA	NA
WP_015057917.1\|1595220_1595811_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_012767324.1\|1595824_1596208_-	VOC family protein	V5UQY3	Oenococcus_phage	2.6e-31	50.0
WP_012767325.1\|1596562_1596958_-	helix-hairpin-helix domain-containing protein	NA	NA	NA	NA
WP_003055949.1\|1596978_1597233_-	DUF1912 family protein	NA	NA	NA	NA
WP_015057918.1\|1597334_1598312_-\|transposase	IS30-like element IS1239 family transposase	H7BWC8	unidentified_phage	9.9e-35	32.9
WP_015057919.1\|1598640_1599777_-\|integrase	tyrosine-type recombinase/integrase	A8ATX2	Listeria_phage	1.0e-27	30.6
WP_015057920.1\|1599826_1600153_-	DUF771 domain-containing protein	A0A075LYF5	Staphylococcus_phage	2.4e-06	29.5
1599917:1599931	attR	NA	NA	NA	NA
WP_015057921.1\|1600345_1600945_-	hypothetical protein	NA	NA	NA	NA
WP_015057922.1\|1601048_1601810_-	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA
WP_015057923.1\|1601834_1602392_-	hypothetical protein	NA	NA	NA	NA
WP_015057924.1\|1602391_1603744_-	CHAP domain-containing protein	NA	NA	NA	NA
WP_000528441.1\|1603884_1604028_+\|holin	putative holin-like toxin	NA	NA	NA	NA
WP_041781652.1\|1604195_1604765_-	hypothetical protein	NA	NA	NA	NA
WP_155115630.1\|1605386_1606492_-\|transposase	IS3 family transposase	A0A2I7SC85	Paenibacillus_phage	1.1e-71	49.6

DBSCAN-SWA_9

2134755 : 2141962

Streptococcus_phage(57.14%)

integrase

attL 2133871:2133883|attR 2142264:2142276

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2133871:2133883	attL	NA	NA	NA	NA
WP_015058156.1\|2134755_2136369_-	hypothetical protein	A0A1P8BMF9	Lactococcus_phage	1.2e-146	52.9
WP_041781624.1\|2136358_2136880_-	hypothetical protein	NA	NA	NA	NA
WP_011285315.1\|2136889_2137258_-	hypothetical protein	A0A1X9I6M4	Streptococcus_phage	2.6e-12	47.1
WP_015058158.1\|2137166_2137364_-	hypothetical protein	NA	NA	NA	NA
WP_014612652.1\|2137344_2137485_-	hypothetical protein	NA	NA	NA	NA
WP_015058159.1\|2137481_2137814_-	hypothetical protein	NA	NA	NA	NA
WP_015058160.1\|2138022_2138265_-	hypothetical protein	NA	NA	NA	NA
WP_015058161.1\|2138320_2138884_-	hypothetical protein	A0A0A7S0G2	Clostridium_phage	6.3e-26	45.8
WP_015058162.1\|2138954_2139143_-	hypothetical protein	A0A1X9I5U7	Streptococcus_phage	7.7e-05	39.3
WP_015058163.1\|2139314_2139719_+	helix-turn-helix transcriptional regulator	A0A286QRM9	Streptococcus_phage	1.3e-09	47.8
WP_012767673.1\|2140029_2140554_+	hypothetical protein	A8ASM1	Listeria_phage	5.3e-11	34.3
WP_015058164.1\|2140798_2141962_+\|integrase	site-specific integrase	A0A1X9I6A9	Streptococcus_phage	1.3e-161	70.8
2142264:2142276	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NC_019042

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CRISPR-Cas detection and classification

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Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection