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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NC_018828 Bordetella parapertussis Bpp5, complete genome 9 crisprs csa3,DEDDh,cas3,DinG 7 3 6 3
NC_018830 Bordetella parapertussis Bpp5 plasmid BPP5P1, complete sequence 0 crisprs NA 0 0 0 0

Results visualization

1. NC_018828
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_018828_1 473727-473826 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_018828_2 1222624-1222728 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_018828_3 1325598-1325684 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_018828_4 2259055-2259480 Orphan NA
7 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_018828_5 3189247-3189343 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_018828_6 3327794-3327869 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_018828_7 4158443-4158536 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_018828_8 4427579-4427662 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_018828_9 4510102-4510182 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NC_018828_4 4.1|2259073|30|NC_018828|CRT 2259073-2259102 30 NC_018828.1 1751160-1751189 0 1.0
NC_018828_4 4.1|2259073|30|NC_018828|CRT 2259073-2259102 30 NC_018828.1 1751388-1751417 0 1.0
NC_018828_4 4.2|2259121|54|NC_018828|CRT 2259121-2259174 54 NC_018828.1 1751220-1751273 0 1.0
NC_018828_4 4.4|2259277|42|NC_018828|CRT 2259277-2259318 42 NC_018828.1 1751256-1751297 0 1.0
NC_018828_4 4.5|2259337|30|NC_018828|CRT 2259337-2259366 30 NC_018828.1 1751172-1751201 0 1.0
NC_018828_4 4.5|2259337|30|NC_018828|CRT 2259337-2259366 30 NC_018828.1 1751316-1751345 0 1.0
NC_018828_4 4.6|2259385|18|NC_018828|CRT 2259385-2259402 18 NC_018828.1 1751364-1751381 0 1.0
NC_018828_4 4.6|2259385|18|NC_018828|CRT 2259385-2259402 18 NC_018828.1 1751412-1751429 0 1.0
NC_018828_4 4.7|2259421|42|NC_018828|CRT 2259421-2259462 42 NC_018828.1 1751400-1751441 0 1.0
NC_018828_4 4.1|2259073|30|NC_018828|CRT 2259073-2259102 30 NC_018828.1 1751172-1751201 1 0.967
NC_018828_4 4.1|2259073|30|NC_018828|CRT 2259073-2259102 30 NC_018828.1 1751304-1751333 1 0.967
NC_018828_4 4.1|2259073|30|NC_018828|CRT 2259073-2259102 30 NC_018828.1 1751316-1751345 1 0.967
NC_018828_4 4.4|2259277|42|NC_018828|CRT 2259277-2259318 42 NC_018828.1 1751076-1751117 1 0.976
NC_018828_4 4.4|2259277|42|NC_018828|CRT 2259277-2259318 42 NC_018828.1 1751112-1751153 1 0.976
NC_018828_4 4.4|2259277|42|NC_018828|CRT 2259277-2259318 42 NC_018828.1 1751208-1751249 1 0.976
NC_018828_4 4.4|2259277|42|NC_018828|CRT 2259277-2259318 42 NC_018828.1 1751232-1751273 1 0.976
NC_018828_4 4.5|2259337|30|NC_018828|CRT 2259337-2259366 30 NC_018828.1 1751160-1751189 1 0.967
NC_018828_4 4.5|2259337|30|NC_018828|CRT 2259337-2259366 30 NC_018828.1 1751328-1751357 1 0.967
NC_018828_4 4.5|2259337|30|NC_018828|CRT 2259337-2259366 30 NC_018828.1 1751340-1751369 1 0.967
NC_018828_4 4.5|2259337|30|NC_018828|CRT 2259337-2259366 30 NC_018828.1 1751388-1751417 1 0.967
NC_018828_4 4.6|2259385|18|NC_018828|CRT 2259385-2259402 18 NC_018828.1 1751064-1751081 1 0.944
NC_018828_4 4.6|2259385|18|NC_018828|CRT 2259385-2259402 18 NC_018828.1 1751076-1751093 1 0.944
NC_018828_4 4.6|2259385|18|NC_018828|CRT 2259385-2259402 18 NC_018828.1 1751112-1751129 1 0.944
NC_018828_4 4.6|2259385|18|NC_018828|CRT 2259385-2259402 18 NC_018828.1 1751196-1751213 1 0.944
NC_018828_4 4.6|2259385|18|NC_018828|CRT 2259385-2259402 18 NC_018828.1 1751208-1751225 1 0.944
NC_018828_4 4.6|2259385|18|NC_018828|CRT 2259385-2259402 18 NC_018828.1 1751256-1751273 1 0.944
NC_018828_4 4.6|2259385|18|NC_018828|CRT 2259385-2259402 18 NC_018828.1 1751280-1751297 1 0.944
NC_018828_4 4.6|2259385|18|NC_018828|CRT 2259385-2259402 18 NC_018828.1 1751448-1751465 1 0.944
NC_018828_4 4.6|2259385|18|NC_018828|CRT 2259385-2259402 18 NC_018828.1 2259469-2259486 1 0.944
NC_018828_4 4.1|2259073|30|NC_018828|CRT 2259073-2259102 30 NC_018828.1 1751040-1751069 2 0.933
NC_018828_4 4.1|2259073|30|NC_018828|CRT 2259073-2259102 30 NC_018828.1 1751052-1751081 2 0.933
NC_018828_4 4.1|2259073|30|NC_018828|CRT 2259073-2259102 30 NC_018828.1 1751328-1751357 2 0.933
NC_018828_4 4.1|2259073|30|NC_018828|CRT 2259073-2259102 30 NC_018828.1 1751340-1751369 2 0.933
NC_018828_4 4.2|2259121|54|NC_018828|CRT 2259121-2259174 54 NC_018828.1 1751088-1751141 2 0.963
NC_018828_4 4.5|2259337|30|NC_018828|CRT 2259337-2259366 30 NC_018828.1 1751184-1751213 2 0.933
NC_018828_4 4.5|2259337|30|NC_018828|CRT 2259337-2259366 30 NC_018828.1 1751304-1751333 2 0.933
NC_018828_4 4.7|2259421|42|NC_018828|CRT 2259421-2259462 42 NC_018828.1 1751184-1751225 2 0.952
NC_018828_4 4.7|2259421|42|NC_018828|CRT 2259421-2259462 42 NC_018828.1 1751352-1751393 2 0.952
NC_018828_4 4.3|2259193|66|NC_018828|CRT 2259193-2259258 66 NC_018828.1 1751376-1751441 8 0.879

1. spacer 4.1|2259073|30|NC_018828|CRT matches to position: 1751160-1751189, mismatch: 0, identity: 1.0

cctggcagcgtcccaggcagcgtcccaggc	CRISPR spacer
cctggcagcgtcccaggcagcgtcccaggc	Protospacer
******************************

2. spacer 4.1|2259073|30|NC_018828|CRT matches to position: 1751388-1751417, mismatch: 0, identity: 1.0

cctggcagcgtcccaggcagcgtcccaggc	CRISPR spacer
cctggcagcgtcccaggcagcgtcccaggc	Protospacer
******************************

3. spacer 4.2|2259121|54|NC_018828|CRT matches to position: 1751220-1751273, mismatch: 0, identity: 1.0

actggcagcggccctggcagcggccctggcagcggccctggcagcggcactggc	CRISPR spacer
actggcagcggccctggcagcggccctggcagcggccctggcagcggcactggc	Protospacer
******************************************************

4. spacer 4.4|2259277|42|NC_018828|CRT matches to position: 1751256-1751297, mismatch: 0, identity: 1.0

cctggcagcggcactggcagcggccctggcagcggcactggc	CRISPR spacer
cctggcagcggcactggcagcggccctggcagcggcactggc	Protospacer
******************************************

5. spacer 4.5|2259337|30|NC_018828|CRT matches to position: 1751172-1751201, mismatch: 0, identity: 1.0

ccaggcagcgtcccaggcagcgtcccaggc	CRISPR spacer
ccaggcagcgtcccaggcagcgtcccaggc	Protospacer
******************************

6. spacer 4.5|2259337|30|NC_018828|CRT matches to position: 1751316-1751345, mismatch: 0, identity: 1.0

ccaggcagcgtcccaggcagcgtcccaggc	CRISPR spacer
ccaggcagcgtcccaggcagcgtcccaggc	Protospacer
******************************

7. spacer 4.6|2259385|18|NC_018828|CRT matches to position: 1751364-1751381, mismatch: 0, identity: 1.0

ccaggcagcggcactggc	CRISPR spacer
ccaggcagcggcactggc	Protospacer
******************

8. spacer 4.6|2259385|18|NC_018828|CRT matches to position: 1751412-1751429, mismatch: 0, identity: 1.0

ccaggcagcggcactggc	CRISPR spacer
ccaggcagcggcactggc	Protospacer
******************

9. spacer 4.7|2259421|42|NC_018828|CRT matches to position: 1751400-1751441, mismatch: 0, identity: 1.0

ccaggcagcgtcccaggcagcggcactggcatcggcactggc	CRISPR spacer
ccaggcagcgtcccaggcagcggcactggcatcggcactggc	Protospacer
******************************************

10. spacer 4.1|2259073|30|NC_018828|CRT matches to position: 1751172-1751201, mismatch: 1, identity: 0.967

cctggcagcgtcccaggcagcgtcccaggc	CRISPR spacer
ccaggcagcgtcccaggcagcgtcccaggc	Protospacer
** ***************************

11. spacer 4.1|2259073|30|NC_018828|CRT matches to position: 1751304-1751333, mismatch: 1, identity: 0.967

cctggcagcgtcccaggcagcgtcccaggc	CRISPR spacer
cctggcagcgtaccaggcagcgtcccaggc	Protospacer
*********** ******************

12. spacer 4.1|2259073|30|NC_018828|CRT matches to position: 1751316-1751345, mismatch: 1, identity: 0.967

cctggcagcgtcccaggcagcgtcccaggc	CRISPR spacer
ccaggcagcgtcccaggcagcgtcccaggc	Protospacer
** ***************************

13. spacer 4.4|2259277|42|NC_018828|CRT matches to position: 1751076-1751117, mismatch: 1, identity: 0.976

cctggcagcggcactggcagcggccctggcagcggcactggc	CRISPR spacer
cctggcagcggcactggcagcggccctggcagcggccctggc	Protospacer
************************************ *****

14. spacer 4.4|2259277|42|NC_018828|CRT matches to position: 1751112-1751153, mismatch: 1, identity: 0.976

cctggcagcggcactggcagcggccctggcagcggcactggc	CRISPR spacer
cctggcagcggcactggcagcggccctggcatcggcactggc	Protospacer
******************************* **********

15. spacer 4.4|2259277|42|NC_018828|CRT matches to position: 1751208-1751249, mismatch: 1, identity: 0.976

cctggcagcggcactggcagcggccctggcagcggcactggc	CRISPR spacer
cctggcagcggcactggcagcggccctggcagcggccctggc	Protospacer
************************************ *****

16. spacer 4.4|2259277|42|NC_018828|CRT matches to position: 1751232-1751273, mismatch: 1, identity: 0.976

cctggcagcggcactggcagcggccctggcagcggcactggc	CRISPR spacer
cctggcagcggccctggcagcggccctggcagcggcactggc	Protospacer
************ *****************************

17. spacer 4.5|2259337|30|NC_018828|CRT matches to position: 1751160-1751189, mismatch: 1, identity: 0.967

ccaggcagcgtcccaggcagcgtcccaggc	CRISPR spacer
cctggcagcgtcccaggcagcgtcccaggc	Protospacer
** ***************************

18. spacer 4.5|2259337|30|NC_018828|CRT matches to position: 1751328-1751357, mismatch: 1, identity: 0.967

ccaggcagcgtcccaggcagcgtcccaggc	CRISPR spacer
ccaggcagcgtcccaggcagcggcccaggc	Protospacer
********************** *******

19. spacer 4.5|2259337|30|NC_018828|CRT matches to position: 1751340-1751369, mismatch: 1, identity: 0.967

ccaggcagcgtcccaggcagcgtcccaggc	CRISPR spacer
ccaggcagcggcccaggcagcgtcccaggc	Protospacer
********** *******************

20. spacer 4.5|2259337|30|NC_018828|CRT matches to position: 1751388-1751417, mismatch: 1, identity: 0.967

ccaggcagcgtcccaggcagcgtcccaggc	CRISPR spacer
cctggcagcgtcccaggcagcgtcccaggc	Protospacer
** ***************************

21. spacer 4.6|2259385|18|NC_018828|CRT matches to position: 1751064-1751081, mismatch: 1, identity: 0.944

ccaggcagcggcactggc	CRISPR spacer
ccaggcagcggccctggc	Protospacer
************ *****

22. spacer 4.6|2259385|18|NC_018828|CRT matches to position: 1751076-1751093, mismatch: 1, identity: 0.944

ccaggcagcggcactggc	CRISPR spacer
cctggcagcggcactggc	Protospacer
** ***************

23. spacer 4.6|2259385|18|NC_018828|CRT matches to position: 1751112-1751129, mismatch: 1, identity: 0.944

ccaggcagcggcactggc	CRISPR spacer
cctggcagcggcactggc	Protospacer
** ***************

24. spacer 4.6|2259385|18|NC_018828|CRT matches to position: 1751196-1751213, mismatch: 1, identity: 0.944

ccaggcagcggcactggc	CRISPR spacer
ccaggcagcggccctggc	Protospacer
************ *****

25. spacer 4.6|2259385|18|NC_018828|CRT matches to position: 1751208-1751225, mismatch: 1, identity: 0.944

ccaggcagcggcactggc	CRISPR spacer
cctggcagcggcactggc	Protospacer
** ***************

26. spacer 4.6|2259385|18|NC_018828|CRT matches to position: 1751256-1751273, mismatch: 1, identity: 0.944

ccaggcagcggcactggc	CRISPR spacer
cctggcagcggcactggc	Protospacer
** ***************

27. spacer 4.6|2259385|18|NC_018828|CRT matches to position: 1751280-1751297, mismatch: 1, identity: 0.944

ccaggcagcggcactggc	CRISPR spacer
cctggcagcggcactggc	Protospacer
** ***************

28. spacer 4.6|2259385|18|NC_018828|CRT matches to position: 1751448-1751465, mismatch: 1, identity: 0.944

ccaggcagcggcactggc	CRISPR spacer
cctggcagcggcactggc	Protospacer
** ***************

29. spacer 4.6|2259385|18|NC_018828|CRT matches to position: 2259469-2259486, mismatch: 1, identity: 0.944

ccaggcagcggcactggc	CRISPR spacer
cctggcagcggcactggc	Protospacer
** ***************

30. spacer 4.1|2259073|30|NC_018828|CRT matches to position: 1751040-1751069, mismatch: 2, identity: 0.933

cctggcagcgtcccaggcagcgtcccaggc	CRISPR spacer
cctggcagcggccctggcagcgtcccaggc	Protospacer
********** *** ***************

31. spacer 4.1|2259073|30|NC_018828|CRT matches to position: 1751052-1751081, mismatch: 2, identity: 0.933

cctggcagcgtcccaggcagcgtcccaggc	CRISPR spacer
cctggcagcgtcccaggcagcggccctggc	Protospacer
********************** *** ***

32. spacer 4.1|2259073|30|NC_018828|CRT matches to position: 1751328-1751357, mismatch: 2, identity: 0.933

cctggcagcgtcccaggcagcgtcccaggc	CRISPR spacer
ccaggcagcgtcccaggcagcggcccaggc	Protospacer
** ******************* *******

33. spacer 4.1|2259073|30|NC_018828|CRT matches to position: 1751340-1751369, mismatch: 2, identity: 0.933

cctggcagcgtcccaggcagcgtcccaggc	CRISPR spacer
ccaggcagcggcccaggcagcgtcccaggc	Protospacer
** ******* *******************

34. spacer 4.2|2259121|54|NC_018828|CRT matches to position: 1751088-1751141, mismatch: 2, identity: 0.963

actggcagcggccctggcagcggccctggcagcggccctggcagcggcactggc	CRISPR spacer
actggcagcggccctggcagcggccctggcagcggcactggcagcggccctggc	Protospacer
************************************ *********** *****

35. spacer 4.5|2259337|30|NC_018828|CRT matches to position: 1751184-1751213, mismatch: 2, identity: 0.933

ccaggcagcgtcccaggcagcgtcccaggc	CRISPR spacer
ccaggcagcgtcccaggcagcggccctggc	Protospacer
********************** *** ***

36. spacer 4.5|2259337|30|NC_018828|CRT matches to position: 1751304-1751333, mismatch: 2, identity: 0.933

ccaggcagcgtcccaggcagcgtcccaggc	CRISPR spacer
cctggcagcgtaccaggcagcgtcccaggc	Protospacer
** ******** ******************

37. spacer 4.7|2259421|42|NC_018828|CRT matches to position: 1751184-1751225, mismatch: 2, identity: 0.952

ccaggcagcgtcccaggcagcggcactggcatcggcactggc	CRISPR spacer
ccaggcagcgtcccaggcagcggccctggcagcggcactggc	Protospacer
************************ ****** **********

38. spacer 4.7|2259421|42|NC_018828|CRT matches to position: 1751352-1751393, mismatch: 2, identity: 0.952

ccaggcagcgtcccaggcagcggcactggcatcggcactggc	CRISPR spacer
ccaggcagcgtcccaggcagcggcactggcagcggccctggc	Protospacer
******************************* **** *****

39. spacer 4.3|2259193|66|NC_018828|CRT matches to position: 1751376-1751441, mismatch: 8, identity: 0.879

actggcagcggccctggcagcgtcccaggcagcgtcccaggcagcggccctggcagcggc	CRISPR spacer
actggcagcggccctggcagcgtcccaggcagcgtcccaggcagcggcactggcatcggc	Protospacer
************************************************ ****** ****

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NC_018828_4 4.1|2259073|30|NC_018828|CRT 2259073-2259102 30 MN304817 Phage 68_12, complete genome 24922-24951 0 1.0
NC_018828_4 4.1|2259073|30|NC_018828|CRT 2259073-2259102 30 MN304817 Phage 68_12, complete genome 25042-25071 0 1.0
NC_018828_4 4.5|2259337|30|NC_018828|CRT 2259337-2259366 30 MN304817 Phage 68_12, complete genome 24862-24891 0 1.0
NC_018828_4 4.5|2259337|30|NC_018828|CRT 2259337-2259366 30 MN304817 Phage 68_12, complete genome 24910-24939 0 1.0
NC_018828_4 4.1|2259073|30|NC_018828|CRT 2259073-2259102 30 MN304817 Phage 68_12, complete genome 24862-24891 1 0.967
NC_018828_4 4.1|2259073|30|NC_018828|CRT 2259073-2259102 30 MN304817 Phage 68_12, complete genome 24874-24903 1 0.967
NC_018828_4 4.1|2259073|30|NC_018828|CRT 2259073-2259102 30 MN304817 Phage 68_12, complete genome 24910-24939 1 0.967
NC_018828_4 4.1|2259073|30|NC_018828|CRT 2259073-2259102 30 MN304817 Phage 68_12, complete genome 24982-25011 1 0.967
NC_018828_4 4.1|2259073|30|NC_018828|CRT 2259073-2259102 30 MN304817 Phage 68_12, complete genome 24994-25023 1 0.967
NC_018828_4 4.1|2259073|30|NC_018828|CRT 2259073-2259102 30 MN304817 Phage 68_12, complete genome 25054-25083 1 0.967
NC_018828_4 4.5|2259337|30|NC_018828|CRT 2259337-2259366 30 MN304817 Phage 68_12, complete genome 24850-24879 1 0.967
NC_018828_4 4.5|2259337|30|NC_018828|CRT 2259337-2259366 30 MN304817 Phage 68_12, complete genome 24922-24951 1 0.967
NC_018828_4 4.5|2259337|30|NC_018828|CRT 2259337-2259366 30 MN304817 Phage 68_12, complete genome 24970-24999 1 0.967
NC_018828_4 4.5|2259337|30|NC_018828|CRT 2259337-2259366 30 MN304817 Phage 68_12, complete genome 25042-25071 1 0.967
NC_018828_4 4.1|2259073|30|NC_018828|CRT 2259073-2259102 30 MN304817 Phage 68_12, complete genome 24850-24879 2 0.933
NC_018828_4 4.1|2259073|30|NC_018828|CRT 2259073-2259102 30 MN304817 Phage 68_12, complete genome 24934-24963 2 0.933
NC_018828_4 4.1|2259073|30|NC_018828|CRT 2259073-2259102 30 MN304817 Phage 68_12, complete genome 24970-24999 2 0.933
NC_018828_4 4.1|2259073|30|NC_018828|CRT 2259073-2259102 30 MN304817 Phage 68_12, complete genome 25006-25035 2 0.933
NC_018828_4 4.5|2259337|30|NC_018828|CRT 2259337-2259366 30 MN304817 Phage 68_12, complete genome 24874-24903 2 0.933
NC_018828_4 4.5|2259337|30|NC_018828|CRT 2259337-2259366 30 MN304817 Phage 68_12, complete genome 24898-24927 2 0.933
NC_018828_4 4.5|2259337|30|NC_018828|CRT 2259337-2259366 30 MN304817 Phage 68_12, complete genome 24958-24987 2 0.933
NC_018828_4 4.5|2259337|30|NC_018828|CRT 2259337-2259366 30 MN304817 Phage 68_12, complete genome 24982-25011 2 0.933
NC_018828_4 4.5|2259337|30|NC_018828|CRT 2259337-2259366 30 MN304817 Phage 68_12, complete genome 24994-25023 2 0.933
NC_018828_4 4.5|2259337|30|NC_018828|CRT 2259337-2259366 30 MN304817 Phage 68_12, complete genome 25030-25059 2 0.933
NC_018828_4 4.5|2259337|30|NC_018828|CRT 2259337-2259366 30 MN304817 Phage 68_12, complete genome 25054-25083 2 0.933
NC_018828_4 4.5|2259337|30|NC_018828|CRT 2259337-2259366 30 KR011061 Skermania phage SPI1, complete genome 42358-42387 3 0.9
NC_018828_6 6.1|3327819|26|NC_018828|CRISPRCasFinder 3327819-3327844 26 NZ_CP045303 Azotobacter salinestris strain KACC 13899 plasmid unnamed1, complete sequence 2437-2462 3 0.885
NC_018828_4 4.1|2259073|30|NC_018828|CRT 2259073-2259102 30 NZ_CP025188 Roseomonas mucosa strain AD2 plasmid p1-AD2, complete sequence 965-994 6 0.8
NC_018828_4 4.5|2259337|30|NC_018828|CRT 2259337-2259366 30 NZ_CP025188 Roseomonas mucosa strain AD2 plasmid p1-AD2, complete sequence 965-994 6 0.8
NC_018828_4 4.1|2259073|30|NC_018828|CRT 2259073-2259102 30 MN304817 Phage 68_12, complete genome 25066-25095 7 0.767
NC_018828_4 4.1|2259073|30|NC_018828|CRT 2259073-2259102 30 NZ_CP015733 Arthrobacter sp. U41 plasmid unnamed1, complete sequence 82065-82094 7 0.767
NC_018828_4 4.5|2259337|30|NC_018828|CRT 2259337-2259366 30 MN304817 Phage 68_12, complete genome 25066-25095 7 0.767
NC_018828_4 4.5|2259337|30|NC_018828|CRT 2259337-2259366 30 MN304817 Phage 68_12, complete genome 24838-24867 7 0.767
NC_018828_4 4.5|2259337|30|NC_018828|CRT 2259337-2259366 30 NZ_CP015733 Arthrobacter sp. U41 plasmid unnamed1, complete sequence 82065-82094 7 0.767

1. spacer 4.1|2259073|30|NC_018828|CRT matches to MN304817 (Phage 68_12, complete genome) position: , mismatch: 0, identity: 1.0

cctggcagcgtcccaggcagcgtcccaggc	CRISPR spacer
cctggcagcgtcccaggcagcgtcccaggc	Protospacer
******************************

2. spacer 4.1|2259073|30|NC_018828|CRT matches to MN304817 (Phage 68_12, complete genome) position: , mismatch: 0, identity: 1.0

cctggcagcgtcccaggcagcgtcccaggc	CRISPR spacer
cctggcagcgtcccaggcagcgtcccaggc	Protospacer
******************************

3. spacer 4.5|2259337|30|NC_018828|CRT matches to MN304817 (Phage 68_12, complete genome) position: , mismatch: 0, identity: 1.0

ccaggcagcgtcccaggcagcgtcccaggc	CRISPR spacer
ccaggcagcgtcccaggcagcgtcccaggc	Protospacer
******************************

4. spacer 4.5|2259337|30|NC_018828|CRT matches to MN304817 (Phage 68_12, complete genome) position: , mismatch: 0, identity: 1.0

ccaggcagcgtcccaggcagcgtcccaggc	CRISPR spacer
ccaggcagcgtcccaggcagcgtcccaggc	Protospacer
******************************

5. spacer 4.1|2259073|30|NC_018828|CRT matches to MN304817 (Phage 68_12, complete genome) position: , mismatch: 1, identity: 0.967

cctggcagcgtcccaggcagcgtcccaggc	CRISPR spacer
ccaggcagcgtcccaggcagcgtcccaggc	Protospacer
** ***************************

6. spacer 4.1|2259073|30|NC_018828|CRT matches to MN304817 (Phage 68_12, complete genome) position: , mismatch: 1, identity: 0.967

cctggcagcgtcccaggcagcgtcccaggc	CRISPR spacer
cctggcagcggcccaggcagcgtcccaggc	Protospacer
********** *******************

7. spacer 4.1|2259073|30|NC_018828|CRT matches to MN304817 (Phage 68_12, complete genome) position: , mismatch: 1, identity: 0.967

cctggcagcgtcccaggcagcgtcccaggc	CRISPR spacer
ccaggcagcgtcccaggcagcgtcccaggc	Protospacer
** ***************************

8. spacer 4.1|2259073|30|NC_018828|CRT matches to MN304817 (Phage 68_12, complete genome) position: , mismatch: 1, identity: 0.967

cctggcagcgtcccaggcagcgtcccaggc	CRISPR spacer
cctggcagcgtcccaggcagcggcccaggc	Protospacer
********************** *******

9. spacer 4.1|2259073|30|NC_018828|CRT matches to MN304817 (Phage 68_12, complete genome) position: , mismatch: 1, identity: 0.967

cctggcagcgtcccaggcagcgtcccaggc	CRISPR spacer
cctggcagcgtccctggcagcgtcccaggc	Protospacer
************** ***************

10. spacer 4.1|2259073|30|NC_018828|CRT matches to MN304817 (Phage 68_12, complete genome) position: , mismatch: 1, identity: 0.967

cctggcagcgtcccaggcagcgtcccaggc	CRISPR spacer
cctggcagcgtccctggcagcgtcccaggc	Protospacer
************** ***************

11. spacer 4.5|2259337|30|NC_018828|CRT matches to MN304817 (Phage 68_12, complete genome) position: , mismatch: 1, identity: 0.967

ccaggcagcgtcccaggcagcgtcccaggc	CRISPR spacer
ccaggcagcgtcccaggcagcgtccccggc	Protospacer
************************** ***

12. spacer 4.5|2259337|30|NC_018828|CRT matches to MN304817 (Phage 68_12, complete genome) position: , mismatch: 1, identity: 0.967

ccaggcagcgtcccaggcagcgtcccaggc	CRISPR spacer
cctggcagcgtcccaggcagcgtcccaggc	Protospacer
** ***************************

13. spacer 4.5|2259337|30|NC_018828|CRT matches to MN304817 (Phage 68_12, complete genome) position: , mismatch: 1, identity: 0.967

ccaggcagcgtcccaggcagcgtcccaggc	CRISPR spacer
ccaggcagcggcccaggcagcgtcccaggc	Protospacer
********** *******************

14. spacer 4.5|2259337|30|NC_018828|CRT matches to MN304817 (Phage 68_12, complete genome) position: , mismatch: 1, identity: 0.967

ccaggcagcgtcccaggcagcgtcccaggc	CRISPR spacer
cctggcagcgtcccaggcagcgtcccaggc	Protospacer
** ***************************

15. spacer 4.1|2259073|30|NC_018828|CRT matches to MN304817 (Phage 68_12, complete genome) position: , mismatch: 2, identity: 0.933

cctggcagcgtcccaggcagcgtcccaggc	CRISPR spacer
ccaggcagcgtcccaggcagcgtccccggc	Protospacer
** *********************** ***

16. spacer 4.1|2259073|30|NC_018828|CRT matches to MN304817 (Phage 68_12, complete genome) position: , mismatch: 2, identity: 0.933

cctggcagcgtcccaggcagcgtcccaggc	CRISPR spacer
cctggcagcggccctggcagcgtcccaggc	Protospacer
********** *** ***************

17. spacer 4.1|2259073|30|NC_018828|CRT matches to MN304817 (Phage 68_12, complete genome) position: , mismatch: 2, identity: 0.933

cctggcagcgtcccaggcagcgtcccaggc	CRISPR spacer
ccaggcagcggcccaggcagcgtcccaggc	Protospacer
** ******* *******************

18. spacer 4.1|2259073|30|NC_018828|CRT matches to MN304817 (Phage 68_12, complete genome) position: , mismatch: 2, identity: 0.933

cctggcagcgtcccaggcagcgtcccaggc	CRISPR spacer
cctggcagcgtccctggcagcgtccctggc	Protospacer
************** *********** ***

19. spacer 4.5|2259337|30|NC_018828|CRT matches to MN304817 (Phage 68_12, complete genome) position: , mismatch: 2, identity: 0.933

ccaggcagcgtcccaggcagcgtcccaggc	CRISPR spacer
cctggcagcggcccaggcagcgtcccaggc	Protospacer
** ******* *******************

20. spacer 4.5|2259337|30|NC_018828|CRT matches to MN304817 (Phage 68_12, complete genome) position: , mismatch: 2, identity: 0.933

ccaggcagcgtcccaggcagcgtcccaggc	CRISPR spacer
ccaggcagcgtcccaggcagcggccctggc	Protospacer
********************** *** ***

21. spacer 4.5|2259337|30|NC_018828|CRT matches to MN304817 (Phage 68_12, complete genome) position: , mismatch: 2, identity: 0.933

ccaggcagcgtcccaggcagcgtcccaggc	CRISPR spacer
ccaggcagcgtcccaggcagcggccctggc	Protospacer
********************** *** ***

22. spacer 4.5|2259337|30|NC_018828|CRT matches to MN304817 (Phage 68_12, complete genome) position: , mismatch: 2, identity: 0.933

ccaggcagcgtcccaggcagcgtcccaggc	CRISPR spacer
cctggcagcgtcccaggcagcggcccaggc	Protospacer
** ******************* *******

23. spacer 4.5|2259337|30|NC_018828|CRT matches to MN304817 (Phage 68_12, complete genome) position: , mismatch: 2, identity: 0.933

ccaggcagcgtcccaggcagcgtcccaggc	CRISPR spacer
cctggcagcgtccctggcagcgtcccaggc	Protospacer
** *********** ***************

24. spacer 4.5|2259337|30|NC_018828|CRT matches to MN304817 (Phage 68_12, complete genome) position: , mismatch: 2, identity: 0.933

ccaggcagcgtcccaggcagcgtcccaggc	CRISPR spacer
ccaggcagcgtcccaggcagcggccctggc	Protospacer
********************** *** ***

25. spacer 4.5|2259337|30|NC_018828|CRT matches to MN304817 (Phage 68_12, complete genome) position: , mismatch: 2, identity: 0.933

ccaggcagcgtcccaggcagcgtcccaggc	CRISPR spacer
cctggcagcgtccctggcagcgtcccaggc	Protospacer
** *********** ***************

26. spacer 4.5|2259337|30|NC_018828|CRT matches to KR011061 (Skermania phage SPI1, complete genome) position: , mismatch: 3, identity: 0.9

ccaggcagcgtcccaggcagcgtcccaggc-	CRISPR spacer
ccaggcggcgtcccaggcggcgt-ccaggcg	Protospacer
******.***********.**** ****** 

27. spacer 6.1|3327819|26|NC_018828|CRISPRCasFinder matches to NZ_CP045303 (Azotobacter salinestris strain KACC 13899 plasmid unnamed1, complete sequence) position: , mismatch: 3, identity: 0.885

gtcttggcaggccagcgggacggggt	CRISPR spacer
gtcctggcaggccagcgggatgggtt	Protospacer
***.****************.*** *

28. spacer 4.1|2259073|30|NC_018828|CRT matches to NZ_CP025188 (Roseomonas mucosa strain AD2 plasmid p1-AD2, complete sequence) position: , mismatch: 6, identity: 0.8

cctggcagcgtcccaggcagcgtcccaggc	CRISPR spacer
gtgtgcggcgtcccaggcagcgtccccggc	Protospacer
 .  **.******************* ***

29. spacer 4.5|2259337|30|NC_018828|CRT matches to NZ_CP025188 (Roseomonas mucosa strain AD2 plasmid p1-AD2, complete sequence) position: , mismatch: 6, identity: 0.8

ccaggcagcgtcccaggcagcgtcccaggc	CRISPR spacer
gtgtgcggcgtcccaggcagcgtccccggc	Protospacer
 .. **.******************* ***

30. spacer 4.1|2259073|30|NC_018828|CRT matches to MN304817 (Phage 68_12, complete genome) position: , mismatch: 7, identity: 0.767

cctggcagcgtcccaggcagcgtcccaggc	CRISPR spacer
ctgcagagcgtccctggcagcgtccctggc	Protospacer
*.  . ******** *********** ***

31. spacer 4.1|2259073|30|NC_018828|CRT matches to NZ_CP015733 (Arthrobacter sp. U41 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

cctggcagcgtcccaggcagcgtcccaggc	CRISPR spacer
ccgcgcagcgtcccatgcagcgtcctgcgt	Protospacer
**  *********** *********.. *.

32. spacer 4.5|2259337|30|NC_018828|CRT matches to MN304817 (Phage 68_12, complete genome) position: , mismatch: 7, identity: 0.767

ccaggcagcgtcccaggcagcgtcccaggc	CRISPR spacer
ctgcagagcgtccctggcagcgtccctggc	Protospacer
*.. . ******** *********** ***

33. spacer 4.5|2259337|30|NC_018828|CRT matches to MN304817 (Phage 68_12, complete genome) position: , mismatch: 7, identity: 0.767

ccaggcagcgtcccaggcagcgtcccaggc---	CRISPR spacer
ccaggcagcgtccccggcagca---cgtgcctt	Protospacer
************** ******.   *. **   

34. spacer 4.5|2259337|30|NC_018828|CRT matches to NZ_CP015733 (Arthrobacter sp. U41 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

ccaggcagcgtcccaggcagcgtcccaggc	CRISPR spacer
ccgcgcagcgtcccatgcagcgtcctgcgt	Protospacer
**. *********** *********.. *.

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1715779 : 1774980 66 Bordetella_phage(45.45%) protease,tRNA,head,tail,terminase,transposase NA
DBSCAN-SWA_2 1783207 : 1787019 7 Bordetella_phage(83.33%) NA NA
DBSCAN-SWA_3 2253901 : 2260898 12 Acinetobacter_phage(14.29%) integrase attL 2242819:2242833|attR 2266920:2266934
DBSCAN-SWA_4 2266104 : 2288773 29 Pseudomonas_phage(17.39%) tail,terminase NA
DBSCAN-SWA_5 2298072 : 2306530 7 Lake_Baikal_phage(16.67%) protease,transposase NA
DBSCAN-SWA_6 2975524 : 2982984 8 uncultured_Mediterranean_phage(33.33%) tRNA NA
Click the colored protein region to show detailed information
Click the colored protein region to show detailed information
Click the colored protein region to show detailed information
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
NC_018828.1|WP_015039442.1|1756931_1757147_+|hypothetical-protein 1756931_1757147_+ 71 aa aa NA NA NA 1715779-1774980 yes
NC_018828.1|WP_164926499.1|1757106_1757289_-|hypothetical-protein 1757106_1757289_- 60 aa aa NA NA NA 1715779-1774980 yes
NC_018828.1|WP_015039444.1|1757655_1758030_+|hypothetical-protein 1757655_1758030_+ 124 aa aa NA NA NA 1715779-1774980 yes