CRISPRimmunity

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NC_020076	Mycoplasma pneumoniae M129-B7, complete sequence	2 crisprs	NA	0	0	1	0

1. NC_020076

CRISPR-Cas detection and classification

Crispr_ID: NC_020076_1

• CRISPR_ID: NC_020076_1
• CRISPR_location: 545278-545510
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 3 spacers

Consensus repeat of NC_020076_1

Consensus_repeat	Method
GGTTCTACAACTACTTCTGGTTGAA	CRISPRCasFinder

spacers of NC_020076_1

>1.1|545303|56|NC_020076|CRISPRCasFinder
CTTGTTCCGTTGGAATTAATTCAGACACACCTGCCACAGCTGGTTCTACTGGAAGT
>1.2|545384|20|NC_020076|CRISPRCasFinder
GTTCTACAACAGCTACTACA
>1.3|545429|56|NC_020076|CRISPRCasFinder
TCTCTGCAATAGTTTCAACAACTGGTGTTGGTTCAGTTTGTTGTGCTTCTGTAACT

CRISPR arrays and Neighbor proteins around NC_020076_1

CRISPR arrays

The CRISPR arrays of NC_020076_1

>merge|NC_020076|1|545278-545510|CRISPRCasFinder
GATTCCACAACCACTTCTGGTTGAACTTGTTCCGTTGGAATTAATTCAGACACACCTGCCACAGCTGGTTCTACTGGAAGTGGCTCGGCAACAGCTTCCGGTTGATGTTCTACAACAGCTACTACAGGCTCTGTAACTACCTGAGGTGTAATCTCTGCAATAGTTTCAACAACTGGTGTTGGTTCAGTTTGTTGTGCTTCTGTAACTGGCTCTGCAGCTGCTTCTGGTTGAAC

>NC_020076|1|1|545278-545510|CRISPRCasFinder
GATTCCACAACCACTTCTGGTTGAA	CTTGTTCCGTTGGAATTAATTCAGACACACCTGCCACAGCTGGTTCTACTGGAAGT
GGCTCGGCAACAGCTTCCGGTTGAT	GTTCTACAACAGCTACTACA
GGCTCTGTAACTACCTGAGGTGTAA	TCTCTGCAATAGTTTCAACAACTGGTGTTGGTTCAGTTTGTTGTGCTTCTGTAACT
GGCTCTGCAGCTGCTTCTGGTTGAAC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_020076.2|WP_010874804.1|546479_547337_-|ECF-transporter-S-component	unknown	unknown	gnl|CDD|275311
NC_020076.2|WP_015344913.1|541849_542659_+|alpha/beta-hydrolase	unknown	unknown	gnl|CDD|223669
NC_020076.2|WP_010874798.1|536144_536597_-|hypothetical-protein	unknown	unknown	unknown
NC_020076.2|WP_010874810.1|553594_554176_-|hypothetical-protein	unknown	unknown	unknown
NC_020076.2|WP_010874807.1|549568_550678_-|ComEC/Rec2-family-competence-protein	unknown	unknown	gnl|CDD|273035
NC_020076.2|WP_010874799.1|536581_537811_-|DEAD/DEAH-box-helicase	unknown	unknown	gnl|CDD|223587
NC_020076.2|WP_010874816.1|562713_564411_-|cation-transporter	unknown	unknown	gnl|CDD|280534
NC_020076.2|WP_010874796.1|532873_535054_-|DUF3713-domain-containing-protein	unknown	unknown	gnl|CDD|289287
NC_020076.2|WP_010874805.1|547387_548734_-|hypothetical-protein	unknown	unknown	unknown
NC_020076.2|WP_010874793.1|528975_530694_-|DUF3713-domain-containing-protein	unknown	unknown	gnl|CDD|289287
NC_020076.2|WP_036453231.1|535060_536164_-|hypothetical-protein	unknown	unknown	unknown
NC_020076.2|WP_010874800.1|537817_541795_-|DUF3713-domain-containing-protein	unknown	unknown	gnl|CDD|289287
NC_020076.2|WP_010874794.1|530911_531949_-|hypothetical-protein	unknown	unknown	unknown
NC_020076.2|WP_010874808.1|550717_552736_-|terminal-organelle-protein-HMW3	unknown	unknown	gnl|CDD|236766
NC_020076.2|WP_010874812.1|555453_558471_-|lipoprotein	unknown	unknown	gnl|CDD|340089
NC_020076.2|WP_010874809.1|552749_553574_-|adhesin-P30	unknown	unknown	gnl|CDD|284643
NC_020076.2|WP_015344914.1|548745_549645_-|DNA-polymerase-III,-delta-subunit	unknown	unknown	gnl|CDD|224383
NC_020076.2|WP_010874811.1|554264_555128_-|hypothetical-protein	unknown	unknown	unknown
NC_020076.2|WP_010874795.1|532004_532718_-|hypothetical-protein	unknown	unknown	unknown
NC_020076.2|WP_010874802.1|542719_543337_-|30S-ribosomal-protein-S4	unknown	unknown	gnl|CDD|200066

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_020076.2|WP_010874804.1|546479_547337_-|ECF-transporter-S-component	gnl|CDD|275311	TIGR04518, conserved_hypothetical_protein, ECF transporter S component, folate family. Members of this model are the multiple membrane-spanning S (specificity) component of ECF (energy coupling factor) type uptake transporters. All seed members were found in the vicinity of the bifunctional enzyme folC, involved in making active cofactor from imported folate. However, some species have multiple members of this family, suggesting some diversity of function. [Transport and binding proteins, Unknown substrate].	5.2689e-08
NC_020076.2|WP_015344913.1|541849_542659_+|alpha/beta-hydrolase	gnl|CDD|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	3.01718e-21
NC_020076.2|WP_010874807.1|549568_550678_-|ComEC/Rec2-family-competence-protein	gnl|CDD|273035	TIGR00360, Uncharacterized_protein_MG316_homolog, ComEC/Rec2-related protein. The related model ComEC_Rec2 (TIGR00361) describes a set of proteins of ~ 700-800 residues, one each from a number of different species, of which most can become competent for natural transformation with exogenous DNA. The best-studied examples are ComEC from Bacillus subtilis and Rec-2 from Haemophilus influenzae, where the protein appears to form part of the DNA import structure. This model represents a region found in full-length ComEC/Rec2 and shorter homologs of unknown function from large number of additional bacterial species, most of which are not known to become competent for transformation (an exception is Helicobacter pylori). [Unknown function, General].	1.13253e-43
NC_020076.2|WP_010874799.1|536581_537811_-|DEAD/DEAH-box-helicase	gnl|CDD|223587	COG0513, SrmB, Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis].	8.80058e-80
NC_020076.2|WP_010874796.1|532873_535054_-|DUF3713-domain-containing-protein	gnl|CDD|289287	pfam12506, DUF3713, Protein of unknown function (DUF3713). This family of proteins is found in bacteria. Proteins in this family are typically between 92 and 1225 amino acids in length. There is a single completely conserved residue S that may be functionally important.	6.70571e-31
NC_020076.2|WP_010874793.1|528975_530694_-|DUF3713-domain-containing-protein	gnl|CDD|289287	pfam12506, DUF3713, Protein of unknown function (DUF3713). This family of proteins is found in bacteria. Proteins in this family are typically between 92 and 1225 amino acids in length. There is a single completely conserved residue S that may be functionally important.	1.13282e-30
NC_020076.2|WP_010874800.1|537817_541795_-|DUF3713-domain-containing-protein	gnl|CDD|289287	pfam12506, DUF3713, Protein of unknown function (DUF3713). This family of proteins is found in bacteria. Proteins in this family are typically between 92 and 1225 amino acids in length. There is a single completely conserved residue S that may be functionally important.	6.55221e-27
NC_020076.2|WP_010874816.1|562713_564411_-|cation-transporter	gnl|CDD|280534	pfam02386, TrkH, Cation transport protein. This family consists of various cation transport proteins (Trk) and V-type sodium ATP synthase subunit J or translocating ATPase J EC:3.6.1.34. These proteins are involved in active sodium up-take utilising ATP in the process. TrkH a member of the family from E. coli is a hydrophobic membrane protein and determines the specificity and kinetics of cation transport by the TrK system in E. coli.	1.59891e-146
NC_020076.2|WP_010874808.1|550717_552736_-|terminal-organelle-protein-HMW3	gnl|CDD|236766	PRK10811, rne, ribonuclease E; Reviewed.	2.09637e-15
NC_020076.2|WP_010874812.1|555453_558471_-|lipoprotein	gnl|CDD|340089	pfam17374, DUF5396, Family of unknown function (DUF5396). This is a family of unknown function found in Mycoplasma.	1.80035e-95
NC_020076.2|WP_015344914.1|548745_549645_-|DNA-polymerase-III,-delta-subunit	gnl|CDD|224383	COG1466, HolA, DNA polymerase III, delta subunit [DNA replication, recombination, and repair].	1.58644e-49
NC_020076.2|WP_010874809.1|552749_553574_-|adhesin-P30	gnl|CDD|284643	pfam07271, Cytadhesin_P30, Cytadhesin P30/P32. This family consists of several Mycoplasma species specific Cytadhesin P32 and P30 proteins. P30 has been found to be membrane associated and localized on the tip organelle. It is thought that it is important in cytadherence and virulence.	1.829e-78
NC_020076.2|WP_010874802.1|542719_543337_-|30S-ribosomal-protein-S4	gnl|CDD|200066	TIGR01017, 30S_ribosomal_protein_S4, ribosomal protein S4, bacterial/organelle type. This model finds organelle (chloroplast and mitochondrial) ribosomal protein S4 as well as bacterial ribosomal protein S4. [Protein synthesis, Ribosomal proteins: synthesis and modification].	7.36758e-99

Protein sequences

>NC_020076.2|WP_010874802.1|542719_543337_-|30S-ribosomal-protein-S4
MKYTGSIFKRSRRLGFSLLENNKEFSKGKKRKTIPGQHGNRFRSSTMSGYAQQLQEKQRMQYMYGITDKQFRRLFRLVLKQRGNLAVNLFRVLESRLDNIVYRMGFAPTRRSARQLVNHGHVLLNDRTVDTPSIILNPGDKVRLKAKTIKIPIVKAASESGVVSPFVETNNKTFEGTYVRFPERSELPAGINESYVVEWYKRLVK
>NC_020076.2|WP_015344913.1|541849_542659_+|alpha/beta-hydrolase
MRLEIENGLEFVCDPFLNERGKIFFLHAFTGNITNKLSFRTHFKDYSFYGINFPGHGNSVIHNQSELDFNFWIKLVQQFFNKYQLKNVVLFGHSIGGGLAIALTQVLTKEQIKGIILEAPLNPGIRATPPSIISALVPDTNEDFEAVQRALIYNIEQRFGANFKDFCAKQKQKMIQKYAPLKVMLQPEQAEQRLQLIDAAFKRLSYPTLWIHGQEDGIVRYLPSKAYLESLHNPLIELVGLSNTAHTTFFEQPQQFLQLVEQFLNKLNK
>NC_020076.2|WP_010874800.1|537817_541795_-|DUF3713-domain-containing-protein
MHTFTRKVKWPFMFTAIGLTFGIVAVACAQPTASTVEGLFKPSSAFADRTDFSLSSILQKSLINRESFNQYLAMRLAPVLRTFYEDNYDTDIKERLNGFTADTDNAFVSQEQNLRNQFRENYLVHLQTDIFDNTGGNQAAWKLRDVNNKIIDDFISRIFAKNFVEYVQDGVGPLTKPTKSLIENTSNFKNIKLQPKFVNKNAKLKINNDAVYAAIQDKLLDQFITNENPNLVSRVVFTNETPVDGFDNYFNTKVIQSPTPSYQFQVFNKYNQQSGGTKGANGFNLLASNLKSYKNDQSKGIDIPNKFSSDSGGKLLLKASDMFDTFDPSFSAAFIQGYLALQKKSKGADSKEVDSLIKDKSIIENFFVDNNTQAAAAARAASSSSEGTIQLKTASDGGGTTQSTVHKTDLVKIFGDKDVFAGEYKQQIGNTNANQTGGGGSGGGGGTSTGSSTGSSTETTTGNSSKAVVDLIEVKKDSSSQPDYILSRGKDGIHLMAVDGGSHYLTESGRDVAKQKKFLLFRALQTKYGLVDTDTTYDFKLFDEVKKYFDTNRILFLFEALLDLSSDTNNKDNFLSYPQFKKFADSIKSIEKDLKELVQAHYKQAVFNETAVAENKVTLKLAERNQPFIDNERNNQIEQNGLAAKLPYEQDAKTGHYNDLGNYYKDIIDNVDKKGTSTVKTTSSNTGQTKNFSEEVVSKLKDNKKKVEEAAKKHVEALKVFTIPSPLYSQVILVQTKLSFTPESTSLGLNLALNNYLTSTELQNSIKLSYFQEDEAFKKIIDITNLTFSQQSGGTGGTNGNNNLTADNWKIFKETYLLDLFESQAQKSIFGHVGSSDKNSSTKTGIEGVLDTLYSSLNLEERLDSDDVIDYLSYLYTAHWLLKDNLKNYKQSLQSKLSRTSNAFLVWSVDSEKNKNDSQSTLSSTASSTSNTGLIQLRSVVSLAQNQAAGQGGDNNSDITQTEVKNPNFVFGSSVYDWTNSKTPEVNRAADDTSSFFYTKSSSSSTGAAQSSATVLRSLNQASGMTTKTAKNRYGFRGIVTSSTSGSLPEAVSRRLFKQFVNQTEKGVKVGGQMLITTAKSGKATLVLKQQADDAESTTNNAYKGALFSFGSMDNLKNIINGIQTQTEFDALYNHLTSDLNIDVTGVDKNKTLTEQKTSLTSFVDSNFKQSTQSAQRGDTSARSARSATVQIKKTQEDNQNTNYKDVFSRFDGYIGDNKVEEKNYTSYQFLSDGGKYHATFVKQVNLDDVEKIGTDSLKQEDSSKDKRLNLSLEEFLAAIALEALDPNNQTQAINALISGNKKGLVKVGDFRIFSSISAQWVRRF
>NC_020076.2|WP_010874799.1|536581_537811_-|DEAD/DEAH-box-helicase
MHFIQPLQAFLQTKHIVEFSSIQQAVFKVWPRQNVVGIAETGSGKTFAYLLPALNQIDVTLNKPQAVVFVPTKELKWQILTILNDIKASFTGLKVSENFNSNAHLIVSLIGKDIILHETIKYVVFDEVDMFLEDSSQAEWINCVQLFQKHKPHFGFFSATLFNEQLQQIRKQVAPLTVVNQKKRAWKHSLVKHFLLNLNGQEPFAGLLALLNYHHNEQVLVFCSNAKSLKQLTSLLAHNQLSFKSLHGQLTPNERKHIFTSAANNTVRVLVVSDLLARGIDLPHFSVVISWDLPLVDSFYIHRSGRVARFNSWGNSYVFDLPHNQHKLTKFAHKGILFNSVHLERDGTLKFPQLKQSKQKPAVSSELKTAIKRIKAGYKKVKPNYKKRQKQQIAELFAKRKQRRSWKNF
>NC_020076.2|WP_010874798.1|536144_536597_-|hypothetical-protein
MKKLLIKPQFWFLTLGGFISSSVILVACATPSNSALQTVFKARSNQFFNGEQGSLQNALATALKDPEANKQFVAAPLLKALTAWYENNQDKQVTQFFKDTKKSVDEQYNQAVDKVVSASRNKNLFVQQDLLDSAGGVRNLKSPEVVWTAH
>NC_020076.2|WP_036453231.1|535060_536164_-|hypothetical-protein
MFEQLINDFASRVFQKNYLAYKDGNKVSSGPFLFDEISKSSNWDKIVFDAGQFPEINDAFFAQIQSEVFDQWAEYTDPTVISFTTLKYSAPNQGLGQIYNQDKLKDKLTPSYAFPFFAAADEIAGSQNVGNKRWKQLVKGEEAIEEKPKQQQDGSQTKGVQKEGLTKYVRGTDRGQVIDFPLSLSDTNETKKVVDATNIVDQLEAADLAAVLNIKLDRLGQEKDELLEFKELKDDLNNVIVIDKSSDAQNVSKTNSSFYEDNQNSGTTNTDPIAQALDDIFATKVEQKTNLGKLAEQIKKAAEIKTQTPQARGTVVLRNKSQTQQKNSYVLLDAGIPTFKQQVSTQGQGSVSLHNGTLISLNTSTVA
>NC_020076.2|WP_010874796.1|532873_535054_-|DUF3713-domain-containing-protein
MQQQGETKDQYNTFGLRLVRNSVGVSVLGLDGFVKFIKGGSGGSNGGSSSAKKIDKEEQKKFLKFRAFQAKIGTFYNTNFAFSFPLNETLKGWFDKHRGLILANALVKVTLDTKEKASKALVDAFSSYKNWLSEYTPVGLATTMISFYFDQMKALNNKLLERVRSLNQNVNQANPTPWLNGLSAKLPYVNTNGNYEKLNNYFTFLITKVLWPKVGTEDTNVSEEKSKLKTKTEDVNKIREKILNNIDSKLKTFVQKLKPTLAPRPAYSNVILLNINNDKVWSAGANWSLAVLLDPKKVNPLSFMLLKQMFDQNSLFKKAKTLFENIQNKAKTSGSGKSGTTTNDDADALSKVIGNYYYNTWAKLTDKSIYGNLKDDKFDDLFKLAFDSSINEKSFNVDYKAVIEHYRFIYTLEWLVDKNLKNFKDLLKANLKFGEIAFIAYKNTETQNFSNPQGIFGSYFNYENETNAAKSATQIIDPNSFFYKTTTKPEAKTTQSANTAVMVQNTQMNNQQTNSYGFTGLSTSSGSMLGAATQQAILDQITKTSLQQYGSQADLKKIIGETKNQLLLDRIANQLIALKPNTSGNSGTQKTIAAYFQTDAVGNPTLDFKAKQKLLLDVLDQYKDFFGNNAQAVQRDSGKSGTGNYLTYTDGSDKITYLQFSYKDIDGLSLSSSNGTSSKFASDVVAALLLFQAAYKGTQQLALSSINKPQLPIGDKRIKTGIDLLK
>NC_020076.2|WP_010874795.1|532004_532718_-|hypothetical-protein
MKSFLRKPKFWLLLLGGLSTSSIILSACATPSNSALQAVFKPTSNQFFNGEHGTIQSALNTALRDPETNKKFVAAPLLKALEAWYENNQDKNITQFLKDTKTNVDNQYKTVVDKVVSAPRNKSLFVQQDLLDSSGGSEATWKARKLFEQLISDFASRVFQKNYLSYKENGKVSAGPFLYDTISKNSNWQNIVFDAVNFPETNDDFFAKIQSEVFDQWAEYTDPTIISSVTLKYSAPN
>NC_020076.2|WP_010874794.1|530911_531949_-|hypothetical-protein
MPSPFFAEEKDIPENQNVGNKRWKKLIKGEGSDDGKEKSSDDDDSSSSTKGLFGWRGDTSSGNLFDFPNTLTDVGETKQIVDATTIVDQLEAADLGAALNLKLSFLKQDFDELPVIKKLPDNLNDTIVAKSDNLEKTSKTNSTFYKDNGDSSEKQGSAESKNSPKTQLKEIFNGQNGDSGNLGKLAEQLQKTDSTKMEARSQTWQLRNAVSLKTTNMAQSDENYLLLDAAIPAFETSSQSPQSSGTISGSGALVNLTSTSVNLTQQKSSTTPLNQRIVRNSTGVKLLALEGLLYYVVGSSNKQQSSSSTIATSLAQNQSNNNQEQEINSSLQKNLLKFRAFQAKN
>NC_020076.2|WP_010874793.1|528975_530694_-|DUF3713-domain-containing-protein
MINFLFNQMNALNNKFLERAKALNQNVNQANPTPWLNGLSAKLPYVRTNGNYEKLNNYFTFLIVKYMWKKVGNEDASLSKDSSINKLKTKTEDVNKIRDKILEDIQKKVQEFVKNKLKPTLAPRQTYSNVILLNVNNDKVWSMGANWALANLLDTSKINPLSFMLLKQTFDQNDLFKKAKKLFEDIQSKTNGGSSGGMQGSNTSSSEGADALSKVIGNYYYNSWAKLTDKSIYGNPKDNKFDDLFKLAFEDSINEKSFNVDYKAVIEHYRFIYTLEWLVNGNLKNFKDLLKANLKFGEIAFIAYKNTETKEFSNPQGVFGSAFNYENETNEVKIAAQNLDPNNFFYKTTTKPEEVKTAQNGASMMVMQQKMQSTMQDSNHYGFTGLNTSTSSMLGAATQQAILDQITKNSLQQYGSQQELKTLIEKTNNQLLLDRIASQLSGLNPSTTGNSNNGKGKNIATYFQLDAIGNPTLSFQQKRKLLLDVLDQYKDFFGTNTQAAQRDSGKGGHGSYSTYQDGSDKITYLQFSYKDIDNLSLSDKGNSKLASDVVAALLLFQAADKGTQQLALSAIN
>NC_020076.2|WP_010874804.1|546479_547337_-|ECF-transporter-S-component
MFPYYPLKVTRNLQLLVWAAVLMALSFIFNIFSINVTSVLKVSFTRIPFALIGWMFGPVWGFTFGAIADTMDWLTRGYTWFWLFAIQKPMFCFLAGLVKGVYQVRQSSTNWKIDFWILQSILIGFFVLTLVLLLMYLTDGNFQAAGNQSFGRGFDVNVHILQGITMAAFISFFVGLEIFLGWKYTKVKKPKEMILNLYILMMALLMTLVVSLLIGTVASIEYLVFLSGKPSKNFVKYGSYFFLMPRVLVQALLMPLYLALFKPLIRIAENNLRNYLRVYNLSWKR
>NC_020076.2|WP_010874805.1|547387_548734_-|hypothetical-protein
MTFSDLLTKLQDNLDIVFNANALKERIQSDPAFAKTIREQLKLLYFLEQKQAKAKTKKKDFQPVFQNLEARFVSLGQTKLANTELNLKLDLTDATDLANYLPIAVCNLFNRDLNSFSKLSSVQPTAVEKTTNGANKPTVTIDLNQPRIHTTGTVSPELENFVNESLEARARQRAFMRVTSERMVGKIFEFQFKSQWIKWAQLAIFISMLLIGAAAIAYLVVVNLLFYRYVNPDSNLTKAVTGQNNTDRPALVDLNGGINLFFPVSASTLITLIFLGFGSTSFLLAFQGKPYSFATRSQTFKAMHFLKHQFGVTDFPRINDNYRYKVRIKWIFWTIFLFVALNALPGGNIITGGILNPSFLLNALRSNELKINSETFKTIFVGFSIFYLASIIPFALISIIAFVLSPKPSSDQTNEVLNRYVQEEMQQPFKTDCDPNNDNDLTPPAVFG
>NC_020076.2|WP_015344914.1|548745_549645_-|DNA-polymerase-III,-delta-subunit
MTVVYGADIGLIHQQLNQLLNPAACKQVWFQDVNKLYDVVLNQNLFAEDTKPILIHNCSFLEKNNLTKAELHCLKTLKDTDVVVTIYSDSPANALINDRAITKYACKPVTAKTIHQVISKAAKTLKLNLNPDLIDHLATILPFNLGVIEQELRKLTLLSPAELQDKKMLEAVLCDYQTSQILQLTDAMVRLQTAKALKLIERLFLPKQLTPPQFLEFLANELLLALMVKGVKPQAVFQLQWNVNPFRLKAIQSQYRFWSTNQLTALINAIWQLDIKIKRNDGLAIHLLKHFVLRFFAQK
>NC_020076.2|WP_010874807.1|549568_550678_-|ComEC/Rec2-family-competence-protein
MKWKLFYFFTLLTFTPAYFFIEQNQWVILASFLVIVNLISLTVHWKFGLLLISCSAALLAYCQLMPEFQLAKLMKANWLRTPFISWLDQHTSGVFNQYLKLFLINETTKNTLYQSAIQLNIVHLFVISGFHLSFLFGVMERWLYKRFYINKITGFVMLLLYLFLVGFAFSALRVFVSKLLRQMFPKQLPENNLGLTALLIILMSPGALHNFGFNFSFLACFVLFAINKVKLWKPLQAVLTSTLILIVVSPITLHLNRKLNALSVFHNLLFTPIALFYFCASWLLLPLIPWMGNSLVGFYWPLPWLSQWALNTTVFLNLPKPNWVFYLVYYGLWGLLYTVGTVFYYDRSLWCRYWVNSPAVKPTAQPSRL
>NC_020076.2|WP_010874808.1|550717_552736_-|terminal-organelle-protein-HMW3
MTDKERAKLAKAYGKLAQKIQKSYPDINVVYGRDAKNKLHALYQDPETGNIFSLEKRKQLPADYPLFELDSDEPISFAPKIIPLTAFDGNNNEVIVQYDQVNNTFYDQDGNVLDVSGYRDGENIPLVDYLNYGGSTASADTTTSEPLSGEGYPDIDAGLPVVDPDATPEQQADQLFGLDPLPQAPDEYQDTTAPPAYDQTFDQATYDQQAYDQNYDPNAYYDQQAYDQSFDQQAYDQAYDANAYNTQNYDQAHDPNAYYDSQAYSDPDQASAVAPIEVAPLQPEPVAPVVEPTAVPIVESAPIVEVTPTVEPTPTPVVETAPVVEAPKVVEPTPTPVVEATPAPKVEPKVVEQPQPTPVTVEVDSPKVEIPKVVTAKVALQVAQPTPVPAVPKVAPQPTPAPVVVQPTAVVQPVVKAEPKVVTPTPAPQVVVTPQVATPKVTPKVVQTTPAVPPVVVQPEVVVQPIIRPTQPEPEWKPSPASVVEPQPCQSACVNNESGAITIHTTNRSLLLEKLASLGHLHDASTRTPLPHERYQLAPPSEYVATKYNEPLFNLPAIRNSWARFTRPTVESTPIASRFTGVTPMAVNYRNPASLNFDSLNSFGAYRSPSSFYPLRRPLELSSLRRNRSSFFNTHRFDLGSNYTSFTPRYRSPLRGGLSQRFPLRSSWSKEF
>NC_020076.2|WP_010874809.1|552749_553574_-|adhesin-P30
MKLPPRRKLKLFLLAWMLVLFSALIVLATLILVQHNNTELTEVKSELSPLNVVLHAEEDTVQIQGKPITEQAWFIPTVAGCFGFSALAIILGLAIGLPIVKRKEKRLLEEKERQEQLAEQLQRISAQQEEQQALEQQAAAEAHAEAEVEPAPQPVPVPPQPQVQINFGPRTGFPPQPGMAPRPGMPPHPGMAPRPGFPPQPGMAPRPGMPPHPGMAPRPGFPPQPGMAPRPGMPPHPGMAPRPGFPPQPGMAPRPGMQPPRPGMPPQPGFPPKR
>NC_020076.2|WP_010874810.1|553594_554176_-|hypothetical-protein
MGFFKLLFKLAFLAVLTVAIAYLFLAIFYFGTVSPSFKLAQPMDVFNRFFSKEALDTVTTSGVGATVTAPKAAAASQSHALILAAEQVANNANKLDPRFPIDGSLFSQIPGYVDFLKKPNIPAFLEKVGPYLTKYIIPLGMALVSGLIGALIINFILSKITRAIIKKRRKAKRAQQSRVDDYYYDEAPRRRRR
>NC_020076.2|WP_010874811.1|554264_555128_-|hypothetical-protein
MINQANNQVNFSEQQFVHHKRFSVIRLTFSVAAIGILFIFLIGFGVQQLLTNTTSLGTLASDIRTLGTIAFVASLVSLILYFVTAFKLRNRNTTLAWFWGLIIADVISYGITLGVLLTLATTQLRELIDFKFSDIVFAFLGAALVYGTVWGLSALPSQQRRYQQTQTLFRIFIWAFFISIIASLLTFVLNFTVFRGGRTNILDLLFPGLSLIVGGIFSLLSVYFVCLQIRNEQDLVKLYESQDPALAKAQMWRSALFFGAWLVSSFMNLVYFILRIILLTRNLSRAF
>NC_020076.2|WP_010874812.1|555453_558471_-|lipoprotein
MKFQRKYWGLLSTLGVSSAVALSACAAQARDVYVTSSASDLLKNNSVPMSMFNVSPTSSFFGSKYAGLTTYIATGSNKDDGVNVATQTQEKLVLELATSVKGYKKKDKATSSQKTSTNSSCTTTSSGTSTSGEDDWECIGEIKRQSSSNGQNNQQSKSITEEEKFQEISQKATRYEFAIDTGIKWVDNNGKPVKDASGNDVKLSSKDFERGFEAYILSSELRFNRNGYFIDLMGLDVKKTVGMTKKNGAQVQMKVASSDEKDGEEKTVKITDDAYNPEDYQSTDDSKFNVYLTSPFPFLLSMMSKEFFFPIPHTHPKVKAIKVGKDSPLVYNEKNGSKILDQTKTNFDGIYGGGVNAWRDTWSVGPYYVESFNQSQIVFKRNSEYDTHITPNLPKTREDNEKPIPTMINYFQPGATPEVFYSNYIAGGLSSAEVPYSQQEDARSRFAGTGDLRWVKVQKTAQSAQITYSSRPYVVEGETVKTNSNITETEAKFLYNSESEEALTIRAGINGLINWQNLAIILLPNSGDLNYSIVPFGIFKEKGKNGASVQQKAVSTTEGSDLMNDYYYKIEKEQRLGLIPQREGNYEKNKNVLESATVKINYYSSKATSGQAGAAASAAFAKNNNTSDNTQQNQTSSVEAKSVNVTKHSFVQALKKVGFSGSNPLHFNMKLGNSSLSANGVDYYNAVKQALTELGTADNGEKLIVPEIILGDAQGPTRNEWYIGLSSVLGFSSWSPDYDGVGTWLDAATQLNDQGGGDVITYSSGAHIVRTLLLAASQKDVHSKFTQKIDQQNTASTTSDVTVKKADSSQDSSKSNTEEEKWDDVTSADLFKDDPYVLKNFGDAKAQAAQRSTGSTTSGNGTQASLEFTKKALSLLKFLVDNGILDKEKVKEAIKDPNKYLGKRDKIENGTNKPSKNEDFIGYELKDIYKKAAQLNRFNSIWAEKDTDNAKFLITVVDSYFPVLPVPAAGLNETSPTLLKPWFQFRSAPSGNGTIRDYGFIPENK
>NC_020076.2|WP_010874816.1|562713_564411_-|cation-transporter
MTAAHKQKAKLLAWLKLILWGDSISQRIFHFYIYCILLGAVLLFLPFALKTDYQKVISYEVDLQGHTISKQTASYGFLDALFLAVSAFSDTGLSTTVVSETYSVFGQTVLAILLQLGGIGFVVIAFLVWRLFKLHKKGKYSFYEKLMLQSERGGSKLGTTSEMIVVSVLFLFMVELLYGFLYTILFYFIPAFESASVFQSSGKVSNQLKALIVDSTKRLPVVHNLNLAFQYGFFHSLSAVNNAGIDLLGANSFAPYRTNWGIVIQWLAISQIIFGGIGYPVLFDAYEAIKKRRLYGKYYKHQFSLFTKLAVLTNLIVTAWCFLMLLMVEFIVITSLTNTIAHLNVEKAYLVEGLKNKSNQELQSLIFGPIPAASRVMQLWFGVISSRSAGFSVFPWSAESDIIKGIMVIAMFIGGSPSSTAGGIRTTTLAVIFLTLKAKFRGQKEVKVFKRSIDGQTVINAFLVAVFGLVSVVLIAILLPLSMQQPLSFVDSLFETTSAFGTVGLSSGATKIMALEPTRNLFNYLTLGLLMIMGQVGVSSSVLTFVKKHPQGNSFSYPREDVKVG

Crispr_ID: NC_020076_2

• CRISPR_ID: NC_020076_2
• CRISPR_location: 545740-545905
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 2 spacers

Consensus repeat of NC_020076_2

Consensus_repeat	Method
GGTTCTACAACTACTTCTGGTTGAA	CRISPRCasFinder

spacers of NC_020076_2

>2.1|545765|44|NC_020076|CRISPRCasFinder
TTTCTACTGCTTGTGGTTCTACTGTTGCAGTAGTTTCTCCCACC
>2.2|545834|47|NC_020076|CRISPRCasFinder
CATCGTAAACAGGCTCAGCAGCTACCTCTGGTTGTACCTCATAGCTA

CRISPR arrays and Neighbor proteins around NC_020076_2

CRISPR arrays

The CRISPR arrays of NC_020076_2

>merge|NC_020076|2|545740-545905|CRISPRCasFinder
GGTTCTACAACTACTTCTGGTTGAATTTCTACTGCTTGTGGTTCTACTGTTGCAGTAGTTTCTCCCACCGGTTCTACAGCTACTTCTGGTTGAACATCGTAAACAGGCTCAGCAGCTACCTCTGGTTGTACCTCATAGCTAGGTTCAGCAACTTCTGGTGCTGGTA

>NC_020076|2|2|545740-545905|CRISPRCasFinder
GGTTCTACAACTACTTCTGGTTGAA	TTTCTACTGCTTGTGGTTCTACTGTTGCAGTAGTTTCTCCCACC
GGTTCTACAGCTACTTCTGGTTGAA	CATCGTAAACAGGCTCAGCAGCTACCTCTGGTTGTACCTCATAGCTA
GGTTCAGCAACTTCTGGTGCTGGTA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_020076.2|WP_010874804.1|546479_547337_-|ECF-transporter-S-component	unknown	unknown	gnl|CDD|275311
NC_020076.2|WP_015344913.1|541849_542659_+|alpha/beta-hydrolase	unknown	unknown	gnl|CDD|223669
NC_020076.2|WP_010874798.1|536144_536597_-|hypothetical-protein	unknown	unknown	unknown
NC_020076.2|WP_010874810.1|553594_554176_-|hypothetical-protein	unknown	unknown	unknown
NC_020076.2|WP_010874807.1|549568_550678_-|ComEC/Rec2-family-competence-protein	unknown	unknown	gnl|CDD|273035
NC_020076.2|WP_010874799.1|536581_537811_-|DEAD/DEAH-box-helicase	unknown	unknown	gnl|CDD|223587
NC_020076.2|WP_010874816.1|562713_564411_-|cation-transporter	unknown	unknown	gnl|CDD|280534
NC_020076.2|WP_010874796.1|532873_535054_-|DUF3713-domain-containing-protein	unknown	unknown	gnl|CDD|289287
NC_020076.2|WP_010874805.1|547387_548734_-|hypothetical-protein	unknown	unknown	unknown
NC_020076.2|WP_010874793.1|528975_530694_-|DUF3713-domain-containing-protein	unknown	unknown	gnl|CDD|289287
NC_020076.2|WP_036453231.1|535060_536164_-|hypothetical-protein	unknown	unknown	unknown
NC_020076.2|WP_010874800.1|537817_541795_-|DUF3713-domain-containing-protein	unknown	unknown	gnl|CDD|289287
NC_020076.2|WP_010874794.1|530911_531949_-|hypothetical-protein	unknown	unknown	unknown
NC_020076.2|WP_010874808.1|550717_552736_-|terminal-organelle-protein-HMW3	unknown	unknown	gnl|CDD|236766
NC_020076.2|WP_010874812.1|555453_558471_-|lipoprotein	unknown	unknown	gnl|CDD|340089
NC_020076.2|WP_010874809.1|552749_553574_-|adhesin-P30	unknown	unknown	gnl|CDD|284643
NC_020076.2|WP_015344914.1|548745_549645_-|DNA-polymerase-III,-delta-subunit	unknown	unknown	gnl|CDD|224383
NC_020076.2|WP_010874811.1|554264_555128_-|hypothetical-protein	unknown	unknown	unknown
NC_020076.2|WP_010874795.1|532004_532718_-|hypothetical-protein	unknown	unknown	unknown
NC_020076.2|WP_010874802.1|542719_543337_-|30S-ribosomal-protein-S4	unknown	unknown	gnl|CDD|200066

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_020076.2|WP_010874804.1|546479_547337_-|ECF-transporter-S-component	gnl|CDD|275311	TIGR04518, conserved_hypothetical_protein, ECF transporter S component, folate family. Members of this model are the multiple membrane-spanning S (specificity) component of ECF (energy coupling factor) type uptake transporters. All seed members were found in the vicinity of the bifunctional enzyme folC, involved in making active cofactor from imported folate. However, some species have multiple members of this family, suggesting some diversity of function. [Transport and binding proteins, Unknown substrate].	5.2689e-08
NC_020076.2|WP_015344913.1|541849_542659_+|alpha/beta-hydrolase	gnl|CDD|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	3.01718e-21
NC_020076.2|WP_010874807.1|549568_550678_-|ComEC/Rec2-family-competence-protein	gnl|CDD|273035	TIGR00360, Uncharacterized_protein_MG316_homolog, ComEC/Rec2-related protein. The related model ComEC_Rec2 (TIGR00361) describes a set of proteins of ~ 700-800 residues, one each from a number of different species, of which most can become competent for natural transformation with exogenous DNA. The best-studied examples are ComEC from Bacillus subtilis and Rec-2 from Haemophilus influenzae, where the protein appears to form part of the DNA import structure. This model represents a region found in full-length ComEC/Rec2 and shorter homologs of unknown function from large number of additional bacterial species, most of which are not known to become competent for transformation (an exception is Helicobacter pylori). [Unknown function, General].	1.13253e-43
NC_020076.2|WP_010874799.1|536581_537811_-|DEAD/DEAH-box-helicase	gnl|CDD|223587	COG0513, SrmB, Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis].	8.80058e-80
NC_020076.2|WP_010874796.1|532873_535054_-|DUF3713-domain-containing-protein	gnl|CDD|289287	pfam12506, DUF3713, Protein of unknown function (DUF3713). This family of proteins is found in bacteria. Proteins in this family are typically between 92 and 1225 amino acids in length. There is a single completely conserved residue S that may be functionally important.	6.70571e-31
NC_020076.2|WP_010874793.1|528975_530694_-|DUF3713-domain-containing-protein	gnl|CDD|289287	pfam12506, DUF3713, Protein of unknown function (DUF3713). This family of proteins is found in bacteria. Proteins in this family are typically between 92 and 1225 amino acids in length. There is a single completely conserved residue S that may be functionally important.	1.13282e-30
NC_020076.2|WP_010874800.1|537817_541795_-|DUF3713-domain-containing-protein	gnl|CDD|289287	pfam12506, DUF3713, Protein of unknown function (DUF3713). This family of proteins is found in bacteria. Proteins in this family are typically between 92 and 1225 amino acids in length. There is a single completely conserved residue S that may be functionally important.	6.55221e-27
NC_020076.2|WP_010874816.1|562713_564411_-|cation-transporter	gnl|CDD|280534	pfam02386, TrkH, Cation transport protein. This family consists of various cation transport proteins (Trk) and V-type sodium ATP synthase subunit J or translocating ATPase J EC:3.6.1.34. These proteins are involved in active sodium up-take utilising ATP in the process. TrkH a member of the family from E. coli is a hydrophobic membrane protein and determines the specificity and kinetics of cation transport by the TrK system in E. coli.	1.59891e-146
NC_020076.2|WP_010874808.1|550717_552736_-|terminal-organelle-protein-HMW3	gnl|CDD|236766	PRK10811, rne, ribonuclease E; Reviewed.	2.09637e-15
NC_020076.2|WP_010874812.1|555453_558471_-|lipoprotein	gnl|CDD|340089	pfam17374, DUF5396, Family of unknown function (DUF5396). This is a family of unknown function found in Mycoplasma.	1.80035e-95
NC_020076.2|WP_015344914.1|548745_549645_-|DNA-polymerase-III,-delta-subunit	gnl|CDD|224383	COG1466, HolA, DNA polymerase III, delta subunit [DNA replication, recombination, and repair].	1.58644e-49
NC_020076.2|WP_010874809.1|552749_553574_-|adhesin-P30	gnl|CDD|284643	pfam07271, Cytadhesin_P30, Cytadhesin P30/P32. This family consists of several Mycoplasma species specific Cytadhesin P32 and P30 proteins. P30 has been found to be membrane associated and localized on the tip organelle. It is thought that it is important in cytadherence and virulence.	1.829e-78
NC_020076.2|WP_010874802.1|542719_543337_-|30S-ribosomal-protein-S4	gnl|CDD|200066	TIGR01017, 30S_ribosomal_protein_S4, ribosomal protein S4, bacterial/organelle type. This model finds organelle (chloroplast and mitochondrial) ribosomal protein S4 as well as bacterial ribosomal protein S4. [Protein synthesis, Ribosomal proteins: synthesis and modification].	7.36758e-99

Protein sequences

>NC_020076.2|WP_010874802.1|542719_543337_-|30S-ribosomal-protein-S4
MKYTGSIFKRSRRLGFSLLENNKEFSKGKKRKTIPGQHGNRFRSSTMSGYAQQLQEKQRMQYMYGITDKQFRRLFRLVLKQRGNLAVNLFRVLESRLDNIVYRMGFAPTRRSARQLVNHGHVLLNDRTVDTPSIILNPGDKVRLKAKTIKIPIVKAASESGVVSPFVETNNKTFEGTYVRFPERSELPAGINESYVVEWYKRLVK
>NC_020076.2|WP_015344913.1|541849_542659_+|alpha/beta-hydrolase
MRLEIENGLEFVCDPFLNERGKIFFLHAFTGNITNKLSFRTHFKDYSFYGINFPGHGNSVIHNQSELDFNFWIKLVQQFFNKYQLKNVVLFGHSIGGGLAIALTQVLTKEQIKGIILEAPLNPGIRATPPSIISALVPDTNEDFEAVQRALIYNIEQRFGANFKDFCAKQKQKMIQKYAPLKVMLQPEQAEQRLQLIDAAFKRLSYPTLWIHGQEDGIVRYLPSKAYLESLHNPLIELVGLSNTAHTTFFEQPQQFLQLVEQFLNKLNK
>NC_020076.2|WP_010874800.1|537817_541795_-|DUF3713-domain-containing-protein
MHTFTRKVKWPFMFTAIGLTFGIVAVACAQPTASTVEGLFKPSSAFADRTDFSLSSILQKSLINRESFNQYLAMRLAPVLRTFYEDNYDTDIKERLNGFTADTDNAFVSQEQNLRNQFRENYLVHLQTDIFDNTGGNQAAWKLRDVNNKIIDDFISRIFAKNFVEYVQDGVGPLTKPTKSLIENTSNFKNIKLQPKFVNKNAKLKINNDAVYAAIQDKLLDQFITNENPNLVSRVVFTNETPVDGFDNYFNTKVIQSPTPSYQFQVFNKYNQQSGGTKGANGFNLLASNLKSYKNDQSKGIDIPNKFSSDSGGKLLLKASDMFDTFDPSFSAAFIQGYLALQKKSKGADSKEVDSLIKDKSIIENFFVDNNTQAAAAARAASSSSEGTIQLKTASDGGGTTQSTVHKTDLVKIFGDKDVFAGEYKQQIGNTNANQTGGGGSGGGGGTSTGSSTGSSTETTTGNSSKAVVDLIEVKKDSSSQPDYILSRGKDGIHLMAVDGGSHYLTESGRDVAKQKKFLLFRALQTKYGLVDTDTTYDFKLFDEVKKYFDTNRILFLFEALLDLSSDTNNKDNFLSYPQFKKFADSIKSIEKDLKELVQAHYKQAVFNETAVAENKVTLKLAERNQPFIDNERNNQIEQNGLAAKLPYEQDAKTGHYNDLGNYYKDIIDNVDKKGTSTVKTTSSNTGQTKNFSEEVVSKLKDNKKKVEEAAKKHVEALKVFTIPSPLYSQVILVQTKLSFTPESTSLGLNLALNNYLTSTELQNSIKLSYFQEDEAFKKIIDITNLTFSQQSGGTGGTNGNNNLTADNWKIFKETYLLDLFESQAQKSIFGHVGSSDKNSSTKTGIEGVLDTLYSSLNLEERLDSDDVIDYLSYLYTAHWLLKDNLKNYKQSLQSKLSRTSNAFLVWSVDSEKNKNDSQSTLSSTASSTSNTGLIQLRSVVSLAQNQAAGQGGDNNSDITQTEVKNPNFVFGSSVYDWTNSKTPEVNRAADDTSSFFYTKSSSSSTGAAQSSATVLRSLNQASGMTTKTAKNRYGFRGIVTSSTSGSLPEAVSRRLFKQFVNQTEKGVKVGGQMLITTAKSGKATLVLKQQADDAESTTNNAYKGALFSFGSMDNLKNIINGIQTQTEFDALYNHLTSDLNIDVTGVDKNKTLTEQKTSLTSFVDSNFKQSTQSAQRGDTSARSARSATVQIKKTQEDNQNTNYKDVFSRFDGYIGDNKVEEKNYTSYQFLSDGGKYHATFVKQVNLDDVEKIGTDSLKQEDSSKDKRLNLSLEEFLAAIALEALDPNNQTQAINALISGNKKGLVKVGDFRIFSSISAQWVRRF
>NC_020076.2|WP_010874799.1|536581_537811_-|DEAD/DEAH-box-helicase
MHFIQPLQAFLQTKHIVEFSSIQQAVFKVWPRQNVVGIAETGSGKTFAYLLPALNQIDVTLNKPQAVVFVPTKELKWQILTILNDIKASFTGLKVSENFNSNAHLIVSLIGKDIILHETIKYVVFDEVDMFLEDSSQAEWINCVQLFQKHKPHFGFFSATLFNEQLQQIRKQVAPLTVVNQKKRAWKHSLVKHFLLNLNGQEPFAGLLALLNYHHNEQVLVFCSNAKSLKQLTSLLAHNQLSFKSLHGQLTPNERKHIFTSAANNTVRVLVVSDLLARGIDLPHFSVVISWDLPLVDSFYIHRSGRVARFNSWGNSYVFDLPHNQHKLTKFAHKGILFNSVHLERDGTLKFPQLKQSKQKPAVSSELKTAIKRIKAGYKKVKPNYKKRQKQQIAELFAKRKQRRSWKNF
>NC_020076.2|WP_010874798.1|536144_536597_-|hypothetical-protein
MKKLLIKPQFWFLTLGGFISSSVILVACATPSNSALQTVFKARSNQFFNGEQGSLQNALATALKDPEANKQFVAAPLLKALTAWYENNQDKQVTQFFKDTKKSVDEQYNQAVDKVVSASRNKNLFVQQDLLDSAGGVRNLKSPEVVWTAH
>NC_020076.2|WP_036453231.1|535060_536164_-|hypothetical-protein
MFEQLINDFASRVFQKNYLAYKDGNKVSSGPFLFDEISKSSNWDKIVFDAGQFPEINDAFFAQIQSEVFDQWAEYTDPTVISFTTLKYSAPNQGLGQIYNQDKLKDKLTPSYAFPFFAAADEIAGSQNVGNKRWKQLVKGEEAIEEKPKQQQDGSQTKGVQKEGLTKYVRGTDRGQVIDFPLSLSDTNETKKVVDATNIVDQLEAADLAAVLNIKLDRLGQEKDELLEFKELKDDLNNVIVIDKSSDAQNVSKTNSSFYEDNQNSGTTNTDPIAQALDDIFATKVEQKTNLGKLAEQIKKAAEIKTQTPQARGTVVLRNKSQTQQKNSYVLLDAGIPTFKQQVSTQGQGSVSLHNGTLISLNTSTVA
>NC_020076.2|WP_010874796.1|532873_535054_-|DUF3713-domain-containing-protein
MQQQGETKDQYNTFGLRLVRNSVGVSVLGLDGFVKFIKGGSGGSNGGSSSAKKIDKEEQKKFLKFRAFQAKIGTFYNTNFAFSFPLNETLKGWFDKHRGLILANALVKVTLDTKEKASKALVDAFSSYKNWLSEYTPVGLATTMISFYFDQMKALNNKLLERVRSLNQNVNQANPTPWLNGLSAKLPYVNTNGNYEKLNNYFTFLITKVLWPKVGTEDTNVSEEKSKLKTKTEDVNKIREKILNNIDSKLKTFVQKLKPTLAPRPAYSNVILLNINNDKVWSAGANWSLAVLLDPKKVNPLSFMLLKQMFDQNSLFKKAKTLFENIQNKAKTSGSGKSGTTTNDDADALSKVIGNYYYNTWAKLTDKSIYGNLKDDKFDDLFKLAFDSSINEKSFNVDYKAVIEHYRFIYTLEWLVDKNLKNFKDLLKANLKFGEIAFIAYKNTETQNFSNPQGIFGSYFNYENETNAAKSATQIIDPNSFFYKTTTKPEAKTTQSANTAVMVQNTQMNNQQTNSYGFTGLSTSSGSMLGAATQQAILDQITKTSLQQYGSQADLKKIIGETKNQLLLDRIANQLIALKPNTSGNSGTQKTIAAYFQTDAVGNPTLDFKAKQKLLLDVLDQYKDFFGNNAQAVQRDSGKSGTGNYLTYTDGSDKITYLQFSYKDIDGLSLSSSNGTSSKFASDVVAALLLFQAAYKGTQQLALSSINKPQLPIGDKRIKTGIDLLK
>NC_020076.2|WP_010874795.1|532004_532718_-|hypothetical-protein
MKSFLRKPKFWLLLLGGLSTSSIILSACATPSNSALQAVFKPTSNQFFNGEHGTIQSALNTALRDPETNKKFVAAPLLKALEAWYENNQDKNITQFLKDTKTNVDNQYKTVVDKVVSAPRNKSLFVQQDLLDSSGGSEATWKARKLFEQLISDFASRVFQKNYLSYKENGKVSAGPFLYDTISKNSNWQNIVFDAVNFPETNDDFFAKIQSEVFDQWAEYTDPTIISSVTLKYSAPN
>NC_020076.2|WP_010874794.1|530911_531949_-|hypothetical-protein
MPSPFFAEEKDIPENQNVGNKRWKKLIKGEGSDDGKEKSSDDDDSSSSTKGLFGWRGDTSSGNLFDFPNTLTDVGETKQIVDATTIVDQLEAADLGAALNLKLSFLKQDFDELPVIKKLPDNLNDTIVAKSDNLEKTSKTNSTFYKDNGDSSEKQGSAESKNSPKTQLKEIFNGQNGDSGNLGKLAEQLQKTDSTKMEARSQTWQLRNAVSLKTTNMAQSDENYLLLDAAIPAFETSSQSPQSSGTISGSGALVNLTSTSVNLTQQKSSTTPLNQRIVRNSTGVKLLALEGLLYYVVGSSNKQQSSSSTIATSLAQNQSNNNQEQEINSSLQKNLLKFRAFQAKN
>NC_020076.2|WP_010874793.1|528975_530694_-|DUF3713-domain-containing-protein
MINFLFNQMNALNNKFLERAKALNQNVNQANPTPWLNGLSAKLPYVRTNGNYEKLNNYFTFLIVKYMWKKVGNEDASLSKDSSINKLKTKTEDVNKIRDKILEDIQKKVQEFVKNKLKPTLAPRQTYSNVILLNVNNDKVWSMGANWALANLLDTSKINPLSFMLLKQTFDQNDLFKKAKKLFEDIQSKTNGGSSGGMQGSNTSSSEGADALSKVIGNYYYNSWAKLTDKSIYGNPKDNKFDDLFKLAFEDSINEKSFNVDYKAVIEHYRFIYTLEWLVNGNLKNFKDLLKANLKFGEIAFIAYKNTETKEFSNPQGVFGSAFNYENETNEVKIAAQNLDPNNFFYKTTTKPEEVKTAQNGASMMVMQQKMQSTMQDSNHYGFTGLNTSTSSMLGAATQQAILDQITKNSLQQYGSQQELKTLIEKTNNQLLLDRIASQLSGLNPSTTGNSNNGKGKNIATYFQLDAIGNPTLSFQQKRKLLLDVLDQYKDFFGTNTQAAQRDSGKGGHGSYSTYQDGSDKITYLQFSYKDIDNLSLSDKGNSKLASDVVAALLLFQAADKGTQQLALSAIN
>NC_020076.2|WP_010874804.1|546479_547337_-|ECF-transporter-S-component
MFPYYPLKVTRNLQLLVWAAVLMALSFIFNIFSINVTSVLKVSFTRIPFALIGWMFGPVWGFTFGAIADTMDWLTRGYTWFWLFAIQKPMFCFLAGLVKGVYQVRQSSTNWKIDFWILQSILIGFFVLTLVLLLMYLTDGNFQAAGNQSFGRGFDVNVHILQGITMAAFISFFVGLEIFLGWKYTKVKKPKEMILNLYILMMALLMTLVVSLLIGTVASIEYLVFLSGKPSKNFVKYGSYFFLMPRVLVQALLMPLYLALFKPLIRIAENNLRNYLRVYNLSWKR
>NC_020076.2|WP_010874805.1|547387_548734_-|hypothetical-protein
MTFSDLLTKLQDNLDIVFNANALKERIQSDPAFAKTIREQLKLLYFLEQKQAKAKTKKKDFQPVFQNLEARFVSLGQTKLANTELNLKLDLTDATDLANYLPIAVCNLFNRDLNSFSKLSSVQPTAVEKTTNGANKPTVTIDLNQPRIHTTGTVSPELENFVNESLEARARQRAFMRVTSERMVGKIFEFQFKSQWIKWAQLAIFISMLLIGAAAIAYLVVVNLLFYRYVNPDSNLTKAVTGQNNTDRPALVDLNGGINLFFPVSASTLITLIFLGFGSTSFLLAFQGKPYSFATRSQTFKAMHFLKHQFGVTDFPRINDNYRYKVRIKWIFWTIFLFVALNALPGGNIITGGILNPSFLLNALRSNELKINSETFKTIFVGFSIFYLASIIPFALISIIAFVLSPKPSSDQTNEVLNRYVQEEMQQPFKTDCDPNNDNDLTPPAVFG
>NC_020076.2|WP_015344914.1|548745_549645_-|DNA-polymerase-III,-delta-subunit
MTVVYGADIGLIHQQLNQLLNPAACKQVWFQDVNKLYDVVLNQNLFAEDTKPILIHNCSFLEKNNLTKAELHCLKTLKDTDVVVTIYSDSPANALINDRAITKYACKPVTAKTIHQVISKAAKTLKLNLNPDLIDHLATILPFNLGVIEQELRKLTLLSPAELQDKKMLEAVLCDYQTSQILQLTDAMVRLQTAKALKLIERLFLPKQLTPPQFLEFLANELLLALMVKGVKPQAVFQLQWNVNPFRLKAIQSQYRFWSTNQLTALINAIWQLDIKIKRNDGLAIHLLKHFVLRFFAQK
>NC_020076.2|WP_010874807.1|549568_550678_-|ComEC/Rec2-family-competence-protein
MKWKLFYFFTLLTFTPAYFFIEQNQWVILASFLVIVNLISLTVHWKFGLLLISCSAALLAYCQLMPEFQLAKLMKANWLRTPFISWLDQHTSGVFNQYLKLFLINETTKNTLYQSAIQLNIVHLFVISGFHLSFLFGVMERWLYKRFYINKITGFVMLLLYLFLVGFAFSALRVFVSKLLRQMFPKQLPENNLGLTALLIILMSPGALHNFGFNFSFLACFVLFAINKVKLWKPLQAVLTSTLILIVVSPITLHLNRKLNALSVFHNLLFTPIALFYFCASWLLLPLIPWMGNSLVGFYWPLPWLSQWALNTTVFLNLPKPNWVFYLVYYGLWGLLYTVGTVFYYDRSLWCRYWVNSPAVKPTAQPSRL
>NC_020076.2|WP_010874808.1|550717_552736_-|terminal-organelle-protein-HMW3
MTDKERAKLAKAYGKLAQKIQKSYPDINVVYGRDAKNKLHALYQDPETGNIFSLEKRKQLPADYPLFELDSDEPISFAPKIIPLTAFDGNNNEVIVQYDQVNNTFYDQDGNVLDVSGYRDGENIPLVDYLNYGGSTASADTTTSEPLSGEGYPDIDAGLPVVDPDATPEQQADQLFGLDPLPQAPDEYQDTTAPPAYDQTFDQATYDQQAYDQNYDPNAYYDQQAYDQSFDQQAYDQAYDANAYNTQNYDQAHDPNAYYDSQAYSDPDQASAVAPIEVAPLQPEPVAPVVEPTAVPIVESAPIVEVTPTVEPTPTPVVETAPVVEAPKVVEPTPTPVVEATPAPKVEPKVVEQPQPTPVTVEVDSPKVEIPKVVTAKVALQVAQPTPVPAVPKVAPQPTPAPVVVQPTAVVQPVVKAEPKVVTPTPAPQVVVTPQVATPKVTPKVVQTTPAVPPVVVQPEVVVQPIIRPTQPEPEWKPSPASVVEPQPCQSACVNNESGAITIHTTNRSLLLEKLASLGHLHDASTRTPLPHERYQLAPPSEYVATKYNEPLFNLPAIRNSWARFTRPTVESTPIASRFTGVTPMAVNYRNPASLNFDSLNSFGAYRSPSSFYPLRRPLELSSLRRNRSSFFNTHRFDLGSNYTSFTPRYRSPLRGGLSQRFPLRSSWSKEF
>NC_020076.2|WP_010874809.1|552749_553574_-|adhesin-P30
MKLPPRRKLKLFLLAWMLVLFSALIVLATLILVQHNNTELTEVKSELSPLNVVLHAEEDTVQIQGKPITEQAWFIPTVAGCFGFSALAIILGLAIGLPIVKRKEKRLLEEKERQEQLAEQLQRISAQQEEQQALEQQAAAEAHAEAEVEPAPQPVPVPPQPQVQINFGPRTGFPPQPGMAPRPGMPPHPGMAPRPGFPPQPGMAPRPGMPPHPGMAPRPGFPPQPGMAPRPGMPPHPGMAPRPGFPPQPGMAPRPGMQPPRPGMPPQPGFPPKR
>NC_020076.2|WP_010874810.1|553594_554176_-|hypothetical-protein
MGFFKLLFKLAFLAVLTVAIAYLFLAIFYFGTVSPSFKLAQPMDVFNRFFSKEALDTVTTSGVGATVTAPKAAAASQSHALILAAEQVANNANKLDPRFPIDGSLFSQIPGYVDFLKKPNIPAFLEKVGPYLTKYIIPLGMALVSGLIGALIINFILSKITRAIIKKRRKAKRAQQSRVDDYYYDEAPRRRRR
>NC_020076.2|WP_010874811.1|554264_555128_-|hypothetical-protein
MINQANNQVNFSEQQFVHHKRFSVIRLTFSVAAIGILFIFLIGFGVQQLLTNTTSLGTLASDIRTLGTIAFVASLVSLILYFVTAFKLRNRNTTLAWFWGLIIADVISYGITLGVLLTLATTQLRELIDFKFSDIVFAFLGAALVYGTVWGLSALPSQQRRYQQTQTLFRIFIWAFFISIIASLLTFVLNFTVFRGGRTNILDLLFPGLSLIVGGIFSLLSVYFVCLQIRNEQDLVKLYESQDPALAKAQMWRSALFFGAWLVSSFMNLVYFILRIILLTRNLSRAF
>NC_020076.2|WP_010874812.1|555453_558471_-|lipoprotein
MKFQRKYWGLLSTLGVSSAVALSACAAQARDVYVTSSASDLLKNNSVPMSMFNVSPTSSFFGSKYAGLTTYIATGSNKDDGVNVATQTQEKLVLELATSVKGYKKKDKATSSQKTSTNSSCTTTSSGTSTSGEDDWECIGEIKRQSSSNGQNNQQSKSITEEEKFQEISQKATRYEFAIDTGIKWVDNNGKPVKDASGNDVKLSSKDFERGFEAYILSSELRFNRNGYFIDLMGLDVKKTVGMTKKNGAQVQMKVASSDEKDGEEKTVKITDDAYNPEDYQSTDDSKFNVYLTSPFPFLLSMMSKEFFFPIPHTHPKVKAIKVGKDSPLVYNEKNGSKILDQTKTNFDGIYGGGVNAWRDTWSVGPYYVESFNQSQIVFKRNSEYDTHITPNLPKTREDNEKPIPTMINYFQPGATPEVFYSNYIAGGLSSAEVPYSQQEDARSRFAGTGDLRWVKVQKTAQSAQITYSSRPYVVEGETVKTNSNITETEAKFLYNSESEEALTIRAGINGLINWQNLAIILLPNSGDLNYSIVPFGIFKEKGKNGASVQQKAVSTTEGSDLMNDYYYKIEKEQRLGLIPQREGNYEKNKNVLESATVKINYYSSKATSGQAGAAASAAFAKNNNTSDNTQQNQTSSVEAKSVNVTKHSFVQALKKVGFSGSNPLHFNMKLGNSSLSANGVDYYNAVKQALTELGTADNGEKLIVPEIILGDAQGPTRNEWYIGLSSVLGFSSWSPDYDGVGTWLDAATQLNDQGGGDVITYSSGAHIVRTLLLAASQKDVHSKFTQKIDQQNTASTTSDVTVKKADSSQDSSKSNTEEEKWDDVTSADLFKDDPYVLKNFGDAKAQAAQRSTGSTTSGNGTQASLEFTKKALSLLKFLVDNGILDKEKVKEAIKDPNKYLGKRDKIENGTNKPSKNEDFIGYELKDIYKKAAQLNRFNSIWAEKDTDNAKFLITVVDSYFPVLPVPAAGLNETSPTLLKPWFQFRSAPSGNGTIRDYGFIPENK
>NC_020076.2|WP_010874816.1|562713_564411_-|cation-transporter
MTAAHKQKAKLLAWLKLILWGDSISQRIFHFYIYCILLGAVLLFLPFALKTDYQKVISYEVDLQGHTISKQTASYGFLDALFLAVSAFSDTGLSTTVVSETYSVFGQTVLAILLQLGGIGFVVIAFLVWRLFKLHKKGKYSFYEKLMLQSERGGSKLGTTSEMIVVSVLFLFMVELLYGFLYTILFYFIPAFESASVFQSSGKVSNQLKALIVDSTKRLPVVHNLNLAFQYGFFHSLSAVNNAGIDLLGANSFAPYRTNWGIVIQWLAISQIIFGGIGYPVLFDAYEAIKKRRLYGKYYKHQFSLFTKLAVLTNLIVTAWCFLMLLMVEFIVITSLTNTIAHLNVEKAYLVEGLKNKSNQELQSLIFGPIPAASRVMQLWFGVISSRSAGFSVFPWSAESDIIKGIMVIAMFIGGSPSSTAGGIRTTTLAVIFLTLKAKFRGQKEVKVFKRSIDGQTVINAFLVAVFGLVSVVLIAILLPLSMQQPLSFVDSLFETTSAFGTVGLSSGATKIMALEPTRNLFNYLTLGLLMIMGQVGVSSSVLTFVKKHPQGNSFSYPREDVKVG

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site
DBSCAN-SWA_1	380773 : 387704	9	Staphylococcus_phage(16.67%)	protease	NA

Sequences of DBSCAN-SWA_1

Nucleotide sequences of DBSCAN-SWA_1

>NC_020076|380773:387704|DBSCAN-SWA
TATGCAGCAGTATCTAGATTTAGCCCGTTATGTTTTAGAGCACGGAAAATACCGTCCAAATCGCACTGATACTGCTGGCATTGGTGTCTTTGGTTACCAGATGCACTTTGATATTTCAAAACACTTTCCGCTCTTGACTACGAAGAAGGTGCACTGAAAGTCGATTGTGCACGAACTTTTGTGGTTCATTAAGGGTGACACCAATATTAAGTACCTAGTCGACAATAAGGTCAACATTTGGAATGAATGACCTTACGAAAGCTTTAAAAAGTCACCTCACTTTAACGGTGAGAGTCAAAAGGAGTTCATTGAACGGATTCGACAAGACGCGAAGTTTGCCCAACAGTTTGGTAACCTCGGACCCGTTTATGGAAAGCAATGGCGTGACTTTAACGGAGTCGATCAATTGAAAAAGGTAATTGCGCAAATTAAGGTAAATCCGTTTTCGCGGCGCTTAATTGTGTCTAGTTGAAATCCCAATGAGGTGGATCAAATGTTGCTCCCGCCTTGTCATTCACTGTACCAGTTTTACGTACAGGACGGGCAGTTGAGCTGCCAGTTGTACCAGCGCAGTGGTGATATTTTTCTAGGTATCCCCTTCAACATTGCGTCCTACTCTCTTCTGGTGTACTTAGTTGCTAAGGAAACTAACCTAAAACCAGGGAGCTTTGTCCACACCATTGGCGATGCCCACATTTACGAAAATCACTTGGAACAAATTAAGTTGCAATTAACACGTCAACCCAAACCATTGCCCAAGGTAGTTTTAAAGAGTGATAAATCAATTTTTGATTATCAATTCGATGATATTGAACTGGTGGATTACGACCACCACCCTACAATTAAAGGAGAGGTAGCAGTTTAAGATGGTAAAAGCAATTTGAGCAATGGATCAAAATGGGTTAATTGGTAACGGTAACAGTTTGCCCTGAAGGATTAAAGCGGAGTTACAGCACTTTCGCCAGACCACGTTGCACCAAGATGTATTAATGGGCTCGGCTACCTATCTTTCCTTACCGCCGGTGTTTAGTGAGCGTAACGTTTATATCCTCACCCGTAACCTCAACTTTAACCCGCCTGATAAGGGCTGTTTGACTAAAGTAATCCATGAATATGAAAACTTTATCCAACCTTATTTGCACCATCCCGATAAACACCTCTACATCTGTGGTGGGGCACAAGTTTATGAACAGCTCATTCCCCGGTGTGATGCGTTAATTGTCTCTACCATTTTCGGTAAATACACCGGGGACAAATACCTCAAAGTGGATTTTAGTCCCTTTGAATTGACCAAAGAGATCAGTTTTGCTGAGTTTAAGGTCGCTTACTATCACAAAATTGCACGATAAAACAATATGGCTAACACAAAAAAATACTTTTTAGAATCAGTTTCTCCCTTAGAATATGCACAAAAAAAGTTTCAGGGCAACTTGCGCTCGGTTAACTGAAACCTAGTGGATGATGAGAAGGATCTGGAAGTGTGAAACCGGATCACGCAAAACTTCTGGTTACCAGAAAAGATTCCGGTATCCAATGACATTCCATCATGAAAGCAGCTGTCTAAGGAATGGCAGGATTTAATTACCAAAACCTTTACGGGGTTAACATTACTTGACACCATCCAAGCTACCATTGGTGACATTAAGCAAATTGACTATGCTTTAACAGATCACGAGCAGGTAATTTACGCCAACTTTGCCTTTATGGTGGGGGTACACGCGCGCTCTTATGGCACCATCTTTTCCACTCTGTGTACTTCAGAACAAATTACTGAAGCACATGAATGGGTGGTGAAAACCGAAAGCTTGCAAAAGCGCGCTAAGGCTTTAATTCCCTATTACACCGGGAAAGACCCATTAAAGTCTAAGGTAGCAGCCGCTTTAATGCCCGGGTTCTTACTGTATGGTGGGTTTTATTTACCGTTTTACCTCTCCTCGCGTAAACAGCTACCCAACACTTCGGACATTATTCGCTTAATTTTGCGCGATAAGGTAATCCATAACTATTACAGTGGGTATAAGTTCCAGCGTAAAGTGGAAAAGATGTCCAAGGAAAAACAGGCTGAGATGAAACGGTTTGTCTTTGATTTAATGTACGAACTGATTGAGTTGGAAAAGGCATACCTCAAGGAACTGTATGAAGGGTTTGGGATTGTAGAAGATGCCATTAAATTCAGTATTTATAACGCTGGTAAGTTTTTGCAAAACTTAGGGTATGACTCACCGTTTACAGAAGAAGAAACGCGGATTAAACCAGAAATTTTTGCCCAATTGTCAGCCAGAGCCGATGAAAACCACGATTTCTTTTCTGGTAATGGTTCGTCATATGTGATGGGAATTAGTGAAGAGACCGAAGATAAGGATTGAGACTTTTAACAATGCATAAAGATATCAAAATAGTCGACGCTAGTGCGATCGTTAAACCAACTGGAACACCGTATGTAGTGTATTTTTCCTCCATTTCTAATAACACCCACCGTTTTATTGAAAAATTGGAGTTTGAACACACCCGCATTCCGGTTAATTTAGATGAACAGATTGAAGTAAACCAGGAGTATGTGCTCTTTTGCCCCACTTACAGTGGTGGTGGGGAATACACATCGGGGGCGGTACCCAAACAGGTAATCCACTTTTTAAACAACAAGCACAACCGTGATTTGTGTCGTGGCGTAATTTCGTCCGGGAACACTAATTTCGGCAATACTTTTGCCATTGCCGGGCCGATTTTGTCGAAAAAGTTAAACGTACCACTTTTATACCAGTTTGAACTTTTAGGCACGAAAAACGATGTAGAACAAGTTCAAACCATTATTACCAATTTCTTTGGTAAAGCCAAATAACCGTTATTAATGATTAGCCAATTATGTCAGTTAAAGAAAAGATTCCTGCTTTCAACACCCAAGAAGACTTAGAAAGCTATATTTCCTTAAATGCCTACACTAAGGTGTACGGTGATTTTAAGATGGATTTACACGCTGTGGAGGCTTACATCCAAGAGCATGTCAAACCCAAAACAAAGGTGTTTCACTCCACCAAGGAACGCTTAGACTTTCTAGTAAAGAATGATTATTACGATGAGAACATCATCAACATGTACAGCTTTGAGCAGTTTGAGGAAATTACACGTAAGGCTTACGCTTACCGTTTTCGTTATGCTAACTTTATGGGGGCATTTAAGTTTTACAACGCTTATGCACTGAAAACCTTTGATGGGAAGTGGTATTTAGAAAACTATGAAGACCGCGTTGTCATGAACGTGCTCTTTTTAGCCAATGGTAACTATAACAAGGCTTTAAAGTTACTCAAACAAATTATTACCAACCGCTTTCAACCAGCTACCCCAACTTTTTTAAATGCGGGACGAAAAAAACGTGGTGAGTTTGTGTCGTGTTACTTACTGCGCATAGAAGACAACATGGAATCAATTGGTCGTGCCATTACCACTACCCTACAGCTCTCCAAGCGTGATGGTGGGGTGGCGTTATTGCTCACTAACATCCGCGAATCGGGTGCGCCAATTAAAAAAATAGAAAACCAGTCATCAGGCATTATTCCAATTATGAAGCTGTTGGAAGACTCTTTTTCTTACGCCAACCAATTAGGGCAAAGACAGGGAGCAGGAGCAGTGTATCTCCATGCCCACCACCCCGATGTCATGCAGTTTTTAGACACAAAGCGCGAAAACGCTGATGAAAAGATCCGGATTAAGTCGCTGTCTTTGGGTCTAGTTATTCCCGACATTACCTTTACTTTAGCTAAAAACAATGAGGAGATGGCCTTGTTTAGTCCGTATGATGTGTATGAGGAGTATGGCAAACCCTTGTCAGACATTTCAGTCACGGAAATGTATTACGAACTGTTAGCGAACCAACGCATTAAAAAGACCTTTATTAATGCGCGCAAGTTCTTCCAAACAGTGGCGGAACTGCACTTTGAAAGCGGTTATCCTTACATCTTATTTGACGATACGGTTAACCGGCGCAACGCGCACCCCAACCGCATTGTCATGTCTAACCTCTGTAGTGAAATTGTCCAACCCTCCACTCCATCGGAGTTCCACCACGATTTGGCTTTTAAAAAGGTTGGTAATGACATTAGCTGTAACTTGGGTAGCTTAAACATTGCCAAAGCAATGGAAAGCGGACCGGAGTTCTCGGAGTTGGTTAAACTAGCGATCGAATCACTTGATTTAGTTTCAAGGGTAAGCAATTTAGAAACGGCTCCATCGATCCAAAAGGGTAATTCCGAAAATCATGCTTTGGGATTAGGGGCAATGAACTTGCACGGTTTTTTAGCAACTAACCAAATTTATTACAACTCCCCTGAAGCAATCGACTTTACTAACATCTTTTTCTATACGGTAGCTTACCATGCCTTTAAAGCATCCAGTGAGCTAGCTTTAGAGAAGGGTAAGTTTAAAAACTTTGAAAACACCAAGTTTGCTGATGGGAGCTACTTTGATAAATATATCAAAGTAGAACCAGACTTTTGAACACCCAAAACCGAGCGCGTTAAGGCGTTGTTTCAAAAGTACCAAGTGGAAATACCAACACGTGAAAACTGAAAGGAGTTAGCACTCAACATTCAGAAAAACGGTTTGGCCAATTCCCACTTACTGGCAATTGCTCCAACGGGTTCAATTTCCTATCTCTCCTCCTGTACTCCTTCACTCCAACCGGTAGTATCCCCGGTAGAAGTGCGCAAGGAAGGTCGGTTGGGACGGATTTATGTACCGGCTTACCAACTCAATAAAGACAGTTACCCTTTTTATAAAGATGGTGCTTACGAACTGGGTCCCGAACCAATTATTAACATAGCAGCAGCGGCACAACAACACGTCGATCAAGCGATTTCGCTCACCCTATTTATGACTGATAAGGCTACCACTCGTGACCTCAATAAAGCTTATATTTATGCTTTTAAAAAGGGTTGTTCTTCCATTTACTATGTCCGAGTGCGCCAGGAAGTACTAGAGGACAGTGAGGATCACACCATTCAAATGCAGCAGTGTGAGGCCTGTGTGATTTAATAATACATATAAATACATATAGTAAGTCTAGCCTTAAGCATGACTTTAGCAGGGGTTAATTTGTTATAATTTCACGCTTATTTGCGTCTTCTGCGGTTCCTAAATTTTGTTTATACAAAATACCAAAAGAAACGGTTTTATTGAAAATGCATGCTATTGTAGTCTGTGGATCAAAGCAATATTTAGTCCACGAAAATGACACTTTTTTTGTTGAAAAACTTGAAGCGCCAGTTGGTAAAGAAATCCAACTCGACAAGGTTTTAATGTTGGATGAAAAGATTGGTGCGCCATACTTGGAAAAAGCGCGAGTAGTGTGTGTGGTGGAAAAGCACGGTTTACAACGCAAAGTAAACGTGATTAAACACATCTCACAAAAACACCACTTAAAAAAGTATGGTCACCGTCAACCTTACACTAAGTTAAAGGTAGTGCGCTTTGTCCATGATTAAACTAACTGTGTCGCACCACAAACTCACCGCTTCCGGGCACGCTTTATTTGCCAAAAAGGGGCAAGACATTGTGTGCGCTGCTGTTAGTGGTATTATCTTTGGCGCTTTGCCCTGGTTTGAAACCAACAGCATTGCCGTTCAAGAAGATGCTACTGTACCCAGTTTAAGCTTGGAGTTAGTGCAACCAACCGCTAAGCTTATCACGGGATTGAGTGTGGTGATTATGCAACTTAAAACCCTCGCGCATTCTTACCCGCAGTTTATTTCGTTTGAAGATCAACGTAAAGATGAATAACAAATATTTTTTAACCAAAATTGACTTACAGTTTTTTGCTTCCAAAAAGGGAGTTGGTTCAACCAAGAACGGCCGTGATTCTCATGCTAAGCGTTTAGGTGCTAAGAAGGCTGATGGTCAGATGATCCGTACTGGTCAAATTATTTACCGCCAACGCGGTACTAGGGTATATCCCGGTGTAAATGTTGGCCTTGGTAGTGATGACACCTTGTTTGCTTTAAGCGACGGCTTGGTAAAATACCAAAAGTTTGGACCTAAACAGGGCAAGACCCGCGTGAGTGTGGTCAAACACAAACTAGATGCCTAAACTCCTAGGAAGCTTTATTTCGTTTAAATCACCCCATTATCTAGTGGGGAGTGTTCGTGACGCTGTTAGCATTAAAGCACAAGCGTTCATGATCTTTTTGGGCGCACCACACACGGCACTACGAGTCGATCCTAATCGTATGCAAATTGACGAGGGTCACACATTGATGGAACAACATAACCTCAGTAAGTCTGGGATGGTTGTCCATGCTCCTTACATTATTAACTGTGCCTCCAAAGATCCGGTAAAGCAAACCTTTGCGATTGACGTTCTGACAAGGGAGGTTAAACTGTGTCATGCCGTGGGTGCTAAACTAATCGTTCTCCACCCCGGTTCAGCGGTTGAGCAAACTCAAACCCAAGCGTTAGATCACCTAATCAAGGTCTTAAATACAGTGATTGCCAACACTAAAGAAGTCATTATTTGTCTCGAAACGATGGCTGGTAAAGGTAATGAAATTGGCCGTGATTTAGACCAGTTAAAGTATGTGATTAACCACATTGAACAACAAGAGCGGATTGGTGTTTGTCTAGATACCTGTCACTTCCATGACAGTGGTAATGACTTTAACAATACTGCCGAAATTATGGAAACGATTGACACTAAACTAGGCTTTGAGTTTTTAAAGGTCATCCACTTAAACGAGTCCAAAAACGTTTGTGGTTCCAAAAAAGACCGTCATGCCAATCTAGGTGAGGGGATGATTGGGTTTGATAATTTAATGCGCTTTATTGCCCAACCGCAAATAAAGCAAATACCGATTGTTTTAGAAACCCCATCTGACAAGCATAATTATCCCGCTGTATATGGTGCTGAAATCGAAAGGATCCGTGCTTGATTTGGAGCACGATAA

Protein sequences of DBSCAN-SWA_1

>NC_020076|380773:387704|381638_382121_+|WP_010874677.1|DBSCAN-SWA
MVKAIWAMDQNGLIGNGNSLPWRIKAELQHFRQTTLHQDVLMGSATYLSLPPVFSERNVYILTRNLNFNPPDKGCLTKVIHEYENFIQPYLHHPDKHLYICGGAQVYEQLIPRCDALIVSTIFGKYTGDKYLKVDFSPFELTKEISFAEFKVAYYHKIAR
>NC_020076|380773:387704|383149_383611_+|WP_010874679.1|DBSCAN-SWA
MHKDIKIVDASAIVKPTGTPYVVYFSSISNNTHRFIEKLEFEHTRIPVNLDEQIEVNQEYVLFCPTYSGGGEYTSGAVPKQVIHFLNNKHNRDLCRGVISSGNTNFGNTFAIAGPILSKKLNVPLLYQFELLGTKNDVEQVQTIITNFFGKAK
>NC_020076|380773:387704|380773_381637_+|WP_010874676.1|DBSCAN-SWA
MQQYLDLARYVLEHGKYRPNRTDTAGIGVFGYQMHFDISKHFPLLTTKKVHWKSIVHELLWFIKGDTNIKYLVDNKVNIWNEWPYESFKKSPHFNGESQKEFIERIRQDAKFAQQFGNLGPVYGKQWRDFNGVDQLKKVIAQIKVNPFSRRLIVSSWNPNEVDQMLLPPCHSLYQFYVQDGQLSCQLYQRSGDIFLGIPFNIASYSLLVYLVAKETNLKPGSFVHTIGDAHIYENHLEQIKLQLTRQPKPLPKVVLKSDKSIFDYQFDDIELVDYDHHPTIKGEVAV
>NC_020076|380773:387704|386843_387704_+|WP_010874684.1|DBSCAN-SWA
MPKLLGSFISFKSPHYLVGSVRDAVSIKAQAFMIFLGAPHTALRVDPNRMQIDEGHTLMEQHNLSKSGMVVHAPYIINCASKDPVKQTFAIDVLTREVKLCHAVGAKLIVLHPGSAVEQTQTQALDHLIKVLNTVIANTKEVIICLETMAGKGNEIGRDLDQLKYVINHIEQQERIGVCLDTCHFHDSGNDFNNTAEIMETIDTKLGFEFLKVIHLNESKNVCGSKKDRHANLGEGMIGFDNLMRFIAQPQIKQIPIVLETPSDKHNYPAVYGAEIERIRAWFGAR
>NC_020076|380773:387704|382127_383147_+|WP_010874678.1|DBSCAN-SWA
MANTKKYFLESVSPLEYAQKKFQGNLRSVNWNLVDDEKDLEVWNRITQNFWLPEKIPVSNDIPSWKQLSKEWQDLITKTFTGLTLLDTIQATIGDIKQIDYALTDHEQVIYANFAFMVGVHARSYGTIFSTLCTSEQITEAHEWVVKTESLQKRAKALIPYYTGKDPLKSKVAAALMPGFLLYGGFYLPFYLSSRKQLPNTSDIIRLILRDKVIHNYYSGYKFQRKVEKMSKEKQAEMKRFVFDLMYELIELEKAYLKELYEGFGIVEDAIKFSIYNAGKFLQNLGYDSPFTEEETRIKPEIFAQLSARADENHDFFSGNGSSYVMGISEETEDKDWDF
>NC_020076|380773:387704|385946_386249_+|WP_010874681.1|DBSCAN-SWA
MHAIVVCGSKQYLVHENDTFFVEKLEAPVGKEIQLDKVLMLDEKIGAPYLEKARVVCVVEKHGLQRKVNVIKHISQKHHLKKYGHRQPYTKLKVVRFVHD
>NC_020076|380773:387704|383634_385800_+|WP_010874680.1|DBSCAN-SWA
MSVKEKIPAFNTQEDLESYISLNAYTKVYGDFKMDLHAVEAYIQEHVKPKTKVFHSTKERLDFLVKNDYYDENIINMYSFEQFEEITRKAYAYRFRYANFMGAFKFYNAYALKTFDGKWYLENYEDRVVMNVLFLANGNYNKALKLLKQIITNRFQPATPTFLNAGRKKRGEFVSCYLLRIEDNMESIGRAITTTLQLSKRDGGVALLLTNIRESGAPIKKIENQSSGIIPIMKLLEDSFSYANQLGQRQGAGAVYLHAHHPDVMQFLDTKRENADEKIRIKSLSLGLVIPDITFTLAKNNEEMALFSPYDVYEEYGKPLSDISVTEMYYELLANQRIKKTFINARKFFQTVAELHFESGYPYILFDDTVNRRNAHPNRIVMSNLCSEIVQPSTPSEFHHDLAFKKVGNDISCNLGSLNIAKAMESGPEFSELVKLAIESLDLVSRVSNLETAPSIQKGNSENHALGLGAMNLHGFLATNQIYYNSPEAIDFTNIFFYTVAYHAFKASSELALEKGKFKNFENTKFADGSYFDKYIKVEPDFWTPKTERVKALFQKYQVEIPTRENWKELALNIQKNGLANSHLLAIAPTGSISYLSSCTPSLQPVVSPVEVRKEGRLGRIYVPAYQLNKDSYPFYKDGAYELGPEPIINIAAAAQQHVDQAISLTLFMTDKATTRDLNKAYIYAFKKGCSSIYYVRVRQEVLEDSEDHTIQMQQCEACVI
>NC_020076|380773:387704|386536_386851_+|WP_010874683.1|DBSCAN-SWA
MNNKYFLTKIDLQFFASKKGVGSTKNGRDSHAKRLGAKKADGQMIRTGQIIYRQRGTRVYPGVNVGLGSDDTLFALSDGLVKYQKFGPKQGKTRVSVVKHKLDA
>NC_020076|380773:387704|386241_386544_+|WP_010874682.1|protease|DBSCAN-SWA
MIKLTVSHHKLTASGHALFAKKGQDIVCAAVSGIIFGALPWFETNSIAVQEDATVPSLSLELVQPTAKLITGLSVVIMQLKTLAHSYPQFISFEDQRKDE

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010874676.1|380773_381637_+	thymidylate synthase	A0A0N9SH48	Staphylococcus_phage	5.4e-93	53.2
WP_010874677.1|381638_382121_+	dihydrofolate reductase	A0A1B2IBQ4	Erwinia_phage	3.4e-12	34.4
WP_010874678.1|382127_383147_+	class 1b ribonucleoside-diphosphate reductase subunit beta	R4TBI6	Mycobacterium_phage	1.0e-98	54.6
WP_010874679.1|383149_383611_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	R4JF54	Bacillus_phage	1.1e-12	37.8
WP_010874680.1|383634_385800_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	V9VI16	Lactococcus_phage	6.1e-178	45.8
WP_010874681.1|385946_386249_+	50S ribosomal protein L21	NA	NA	NA	NA
WP_010874682.1|386241_386544_+|protease	ribosomal-processing cysteine protease Prp	NA	NA	NA	NA
WP_010874683.1|386536_386851_+	50S ribosomal protein L27	NA	NA	NA	NA
WP_010874684.1|386843_387704_+	deoxyribonuclease IV	A0A1V0SBL9	Catovirus	9.3e-29	31.0