CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Prophage number
NC_020180	Klebsiella aerogenes EA1509E, complete genome	0 crisprs	DEDDh	1
NC_020182	Klebsiella aerogenes EA1509E, complete genome	0 crisprs	NA	0
NC_020181	Klebsiella aerogenes EA1509E, complete genome	4 crisprs	DEDDh,DinG,cas3,WYL,csa3	5

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

126209 : 133788

Enterobacteria_phage(33.33%)

integrase

attL 117293:117310|attR 142368:142385

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
117293:117310	attL	NA	NA	NA	NA
WP_001217881.1\|126209_126767_+	recombinase family protein	Q1MVP4	Enterobacteria_phage	2.0e-93	98.4
WP_015365452.1\|126949_127810_+	class A extended-spectrum beta-lactamase TEM-24	Q1MVP3	Enterobacteria_phage	1.2e-158	98.3
WP_001162012.1\|128424_128982_-	recombinase family protein	A0A1B0V7I5	Salmonella_phage	5.8e-48	81.3
WP_000845054.1\|129287_130301_-\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	6.1e-72	45.5
WP_032488579.1\|130461_131016_+	aminoglycoside N-acetyltransferase AAC(6')-Ib3	NA	NA	NA	NA
WP_000777555.1\|131086_131560_+	trimethoprim-resistant dihydrofolate reductase DfrA1	G3MBI7	Bacillus_virus	3.7e-19	32.1
WP_001206316.1\|131652_132444_+	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA1	NA	NA	NA	NA
WP_000679427.1\|132607_132955_+	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA
WP_000259031.1\|132948_133788_+	sulfonamide-resistant dihydropteroate synthase Sul1	A0A0B5J4J5	Pandoravirus	5.0e-11	27.2
142368:142385	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NC_020181

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CRISPR-Cas detection and classification

Crispr_ID: NC_020181_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_020181_1

2287639-2287753

Orphan

Consensus_repeat	Method
AACCGCTCAAACCCGTAGCCCTGCCAGGCGTAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_020181_1

>merge|NC_020181|1|2287639-2287753|CRISPRCasFinder
AACCGCTCAAACCCGTAGCCCTGCCAGGCGTAGTGCAGGCTGGGATAACCCGGATAGCGGCTTACGCCTTATCCGGGCTACCAACCGCTCAAACCTGTAGCCCTGCCAGGCGTAG

>NC_020181|1|1|2287639-2287753|CRISPRCasFinder
AACCGCTCAAACCCGTAGCCCTGCCAGGCGTAG	TGCAGGCTGGGATAACCCGGATAGCGGCTTACGCCTTATCCGGGCTACC
AACCGCTCAAACCTGTAGCCCTGCCAGGCGTAG

Protein	Signature genes	Signature genes Name	Protein_function
NC_020181.1\|WP_015367553.1\|2287800_2288712_-\|glutathione-ABC-transporter-permease-GsiD	unknown	unknown	gnl\|CDD\|185040
NC_020181.1\|WP_015367541.1\|2277270_2278473_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340951
NC_020181.1\|WP_015367559.1\|2295479_2296235_+\|molybdopterin-synthase-adenylyltransferase-MoeB	unknown	unknown	gnl\|CDD\|180204
NC_020181.1\|WP_015367542.1\|2278472_2279285_+\|HAD-family-hydrolase	unknown	unknown	gnl\|CDD\|223635
NC_020181.1\|WP_015367562.1\|2299876_2300692_+\|HAD-family-hydrolase	unknown	unknown	gnl\|CDD\|272905
NC_020181.1\|WP_015367555.1\|2289680_2291222_-\|glutathione-ABC-transporter-substrate-binding-protein-GsiB	unknown	unknown	gnl\|CDD\|185311
NC_020181.1\|WP_015367554.1\|2288713_2289634_-\|glutathione-ABC-transporter-permease-GsiC	unknown	unknown	gnl\|CDD\|185039
NC_020181.1\|WP_015367556.1\|2291255_2293109_-\|glutathione-ABC-transporter-ATP-binding-protein-GsiA	unknown	unknown	gnl\|CDD\|182342
NC_020181.1\|WP_015367558.1\|2294244_2295480_+\|molybdopterin-molybdotransferase-MoeA	unknown	unknown	gnl\|CDD\|182643
NC_020181.1\|WP_015367561.1\|2297293_2299726_+\|formate-C-acetyltransferase/glycerol-dehydratase-family-glycyl-radical-enzyme	unknown	unknown	gnl\|CDD\|273798
NC_020181.1\|WP_032705602.1\|2282329_2283532_-\|serine-type-D-Ala-D-Ala-carboxypeptidase	unknown	unknown	gnl\|CDD\|182189
NC_020181.1\|WP_015367545.1\|2280862_2281456_+\|undecaprenyl-diphosphate-phosphatase	unknown	unknown	gnl\|CDD\|183335
NC_020181.1\|WP_015367552.1\|2286269_2287595_+\|30S-ribosomal-protein-S12-methylthiotransferase-RimO	unknown	unknown	gnl\|CDD\|237838
NC_020181.1\|WP_015367549.1\|2284420_2285524_-\|PQQ-dependent-sugar-dehydrogenase	unknown	unknown	gnl\|CDD\|369642
NC_020181.1\|WP_015367550.1\|2285628_2286012_-\|biofilm-formation-regulator-BssR	unknown	unknown	gnl\|CDD\|183420
NC_020181.1\|WP_015367557.1\|2293123_2294065_-\|beta-aspartyl-peptidase	unknown	unknown	gnl\|CDD\|182319
NC_020181.1\|WP_015367548.1\|2283788_2284415_+\|glutathione-S-transferase-family-protein	unknown	unknown	gnl\|CDD\|223698
NC_020181.1\|WP_015367560.1\|2296390_2297290_+\|glycyl-radical-enzyme-activating-protein	unknown	unknown	gnl\|CDD\|274163
NC_020181.1\|WP_015367543.1\|2279326_2280559_-\|multidrug-efflux-MFS-transporter-KdeA	unknown	unknown	gnl\|CDD\|185300
NC_020181.1\|WP_015367546.1\|2281542_2282301_+\|DNA-binding-transcriptional-repressor-DeoR	unknown	unknown	gnl\|CDD\|182644

Protein	Function_ID	Function_description	E-value
NC_020181.1\|WP_015367553.1\|2287800_2288712_-\|glutathione-ABC-transporter-permease-GsiD	gnl\|CDD\|185040	PRK15082, PRK15082, glutathione ABC transporter permease GsiD; Provisional.	0
NC_020181.1\|WP_015367541.1\|2277270_2278473_+\|MFS-transporter	gnl\|CDD\|340951	cd17393, MFS_MosC_like, Membrane protein MosC and similar proteins of the Major Facilitator Superfamily of transporters. The gene encoding Sinorhizobium meliloti membrane protein MosC is part of the mos locus, which encodes the biosynthesis of the rhizopine 3-O-methyl-scyllo-inosamine. MosC belongs to the bacterial fucose permease, eukaryotic Major facilitator superfamily domain-containing protein 4 (FucP/MFSD4) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	2.11417e-111
NC_020181.1\|WP_015367559.1\|2295479_2296235_+\|molybdopterin-synthase-adenylyltransferase-MoeB	gnl\|CDD\|180204	PRK05690, PRK05690, molybdopterin biosynthesis protein MoeB; Provisional.	0
NC_020181.1\|WP_015367542.1\|2278472_2279285_+\|HAD-family-hydrolase	gnl\|CDD\|223635	COG0561, Cof, Predicted hydrolases of the HAD superfamily [General function prediction only].	1.51107e-66
NC_020181.1\|WP_015367562.1\|2299876_2300692_+\|HAD-family-hydrolase	gnl\|CDD\|272905	TIGR00099, Uncharacterized_protein_MCAP_0867, Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. This subfamily of sequences falls within the Class-IIB subfamily (TIGR01484) of the Haloacid Dehalogenase superfamily of aspartate-nucleophile hydrolases. The use of the name "Cof" as an identifier here is arbitrary and refers to the E. coli Cof protein. This subfamily is notable for the large number of recent paralogs in many species. Listeria, for instance, has 12, Clostridium, Lactococcus and Streptococcus pneumoniae have 8 each, Enterococcus and Salmonella have 7 each, and Bacillus subtilus, Mycoplasma, Staphylococcus and E. coli have 6 each. This high degree of gene duplication is limited to the gamma proteobacteria and low-GC gram positive lineages. The profusion of genes in this subfamily is not coupled with a high degree of divergence, so it is impossible to determine an accurate phylogeny at the equivalog level. Considering the relationship of this subfamily to the other known members of the HAD-IIB subfamily (TIGR01484), sucrose and trehalose phosphatases and phosphomannomutase, it seems a reasonable hypothesis that these enzymes act on phosphorylated sugars. Possibly the diversification of genes in this subfamily represents the diverse sugars and polysaccharides that various bacteria find in their biological niches. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. [Unknown function, Enzymes of unknown specificity].	3.62148e-67
NC_020181.1\|WP_015367555.1\|2289680_2291222_-\|glutathione-ABC-transporter-substrate-binding-protein-GsiB	gnl\|CDD\|185311	PRK15413, PRK15413, glutathione ABC transporter substrate-binding protein GsiB; Provisional.	0
NC_020181.1\|WP_015367554.1\|2288713_2289634_-\|glutathione-ABC-transporter-permease-GsiC	gnl\|CDD\|185039	PRK15081, PRK15081, glutathione ABC transporter permease GsiC; Provisional.	0
NC_020181.1\|WP_015367556.1\|2291255_2293109_-\|glutathione-ABC-transporter-ATP-binding-protein-GsiA	gnl\|CDD\|182342	PRK10261, PRK10261, glutathione transporter ATP-binding protein; Provisional.	0
NC_020181.1\|WP_015367558.1\|2294244_2295480_+\|molybdopterin-molybdotransferase-MoeA	gnl\|CDD\|182643	PRK10680, PRK10680, molybdopterin biosynthesis protein MoeA; Provisional.	0
NC_020181.1\|WP_015367561.1\|2297293_2299726_+\|formate-C-acetyltransferase/glycerol-dehydratase-family-glycyl-radical-enzyme	gnl\|CDD\|273798	TIGR01774, Putative_formate_acetyltransferase_3, glycyl radical enzyme, PFL2/glycerol dehydratase family. This family previously was designated pyruvate formate-lyase, but it now appears that members include the B12-independent glycerol dehydratase. Therefore, the functional definition of the family is being broadened. This family includes the PflF and PflD proteins of E. coli, described as isoforms of pyruvate-formate lyase found in a limited number additional species. PFL catalyzes the reaction pyruvate + CoA -> acetyl-CoA + formate, which is a step in the fermentation of glucose.	0
NC_020181.1\|WP_032705602.1\|2282329_2283532_-\|serine-type-D-Ala-D-Ala-carboxypeptidase	gnl\|CDD\|182189	PRK10001, PRK10001, serine-type D-Ala-D-Ala carboxypeptidase.	0
NC_020181.1\|WP_015367545.1\|2280862_2281456_+\|undecaprenyl-diphosphate-phosphatase	gnl\|CDD\|183335	PRK11837, PRK11837, undecaprenyl pyrophosphate phosphatase; Provisional.	4.18189e-119
NC_020181.1\|WP_015367552.1\|2286269_2287595_+\|30S-ribosomal-protein-S12-methylthiotransferase-RimO	gnl\|CDD\|237838	PRK14862, rimO, 30S ribosomal protein S12 methylthiotransferase RimO.	0
NC_020181.1\|WP_015367549.1\|2284420_2285524_-\|PQQ-dependent-sugar-dehydrogenase	gnl\|CDD\|369642	pfam07995, GSDH, Glucose / Sorbosone dehydrogenase. Members of this family are glucose/sorbosone dehydrogenases that possess a beta-propeller fold.	0
NC_020181.1\|WP_015367550.1\|2285628_2286012_-\|biofilm-formation-regulator-BssR	gnl\|CDD\|183420	PRK12302, bssR, biofilm formation regulator BssR.	9.21693e-68
NC_020181.1\|WP_015367557.1\|2293123_2294065_-\|beta-aspartyl-peptidase	gnl\|CDD\|182319	PRK10226, PRK10226, isoaspartyl peptidase; Provisional.	0
NC_020181.1\|WP_015367548.1\|2283788_2284415_+\|glutathione-S-transferase-family-protein	gnl\|CDD\|223698	COG0625, Gst, Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones].	1.19123e-50
NC_020181.1\|WP_015367560.1\|2296390_2297290_+\|glycyl-radical-enzyme-activating-protein	gnl\|CDD\|274163	TIGR02494, PFLE_PFLC, glycyl-radical enzyme activating protein. This subset of the radical-SAM family (pfam04055) includes a number of probable activating proteins acting on different enzymes all requiring an amino-acid-centered radical. The closest relatives to this family are the pyruvate-formate lyase activating enzyme (PflA, 1.97.1.4, TIGR02493) and the anaerobic ribonucleotide reductase activating enzyme (TIGR02491). Included within this subfamily are activators of hydroxyphenyl acetate decarboxylase (HdpA), benzylsuccinate synthase (BssD), gycerol dehydratase (DhaB2) as well as enzymes annotated in E. coli as activators of different isozymes of pyruvate-formate lyase (PFLC and PFLE) however, these appear to lack characterization and may activate enzymes with distinctive functions. Most of the sequence-level variability between these forms is concentrated within an N-terminal domain which follows a conserved group of three cysteines and contains a variable pattern of 0 to 8 additional cysteines.	5.87925e-138
NC_020181.1\|WP_015367543.1\|2279326_2280559_-\|multidrug-efflux-MFS-transporter-KdeA	gnl\|CDD\|185300	PRK15402, PRK15402, MdfA family multidrug efflux MFS transporter.	0
NC_020181.1\|WP_015367546.1\|2281542_2282301_+\|DNA-binding-transcriptional-repressor-DeoR	gnl\|CDD\|182644	PRK10681, PRK10681, DNA-binding transcriptional repressor DeoR; Provisional.	0

>NC_020181.1|WP_015367552.1|2286269_2287595_+|30S-ribosomal-protein-S12-methylthiotransferase-RimO
MSNVTHQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDNADMVIVNTCGFIDSAVQESLEAIGEALKENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYAPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLAEAKRLADAGVKELLVISQDTSAYGVDVKHRTGFHNGMPVKTSMVSLCEELAKLGIWVRLHYVYPYPHVDDVIPLMAEGKILPYLDIPLQHASPRILKLMKRPGSADRQLARIKQWREICPDLTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGATANELADQVPEVVKEERWNRFMQLQQQISAERLQEKVGREIMVLVDEVDEEGAIGRSMADAPEIDGAVYLNGETNVKPGDVLRVKVEHADEYDLWGSRV
>NC_020181.1|WP_015367550.1|2285628_2286012_-|biofilm-formation-regulator-BssR
MSVDRRYTNLLNKLINANIDLAAYLQLRKAKGYMSVSENDHLRDNLFELCHELRVHAPRLQHAIAPEEMEAFRLAGESVASAAVCLMSGHHDCPAYIAVNVEKLERCLSGLTMNIHILNNSAPMTHA
>NC_020181.1|WP_015367549.1|2284420_2285524_-|PQQ-dependent-sugar-dehydrogenase
MRRYLKITLMTVLLPMAAMAAPRVEVLQDNLDHPWSLAFLPDNEGVLITLRGGELKRWQLDQGLSAPIRGVPKVWANGQGGLLDVVLAPDFAQSRRVWLSYAEAGDDGKAGTAVGYGRLSADLQNLEDFKTVFRQQPKLSTGNHFGGRMVFDGKGHLFIGLGENNQRPTAQDLDKLQGKVVRLTDQGTIPKDNPFVGRTGIRPEIWAYGVRNPQGMAMNPWSDTLWLNEHGPRGGDEINIPQAGKNYGWPLATHGINYSGQPIPEAKGKSAPNTEAPLHVWPASPALSGMAFYNASTFPQWRHKLFIGALKDESLIVLSVDGNTLSEETRLLKDRGKRIRDVRVGPDGYLYLLTDEPDGELLKVSPE
>NC_020181.1|WP_015367548.1|2283788_2284415_+|glutathione-S-transferase-family-protein
MITLWGRNNSTNVKKVRWVLAELDLPYQQILAGLEYGLNHDPEYLAMNPNGLVPLLKDDANGLVLWESNAIIRYLAAQYGQNRLWVESPVQRAQGEKWMDWANATLSPAHRPVLMGLVRTPPDQRDPAAIEAGIHACEGLFAMLDDELAKHAWLSGDEFGLGDVAVAPFVYNLLSILDSWQPRPHLQRWYQQIQQRQAFRDVVMIPVT
>NC_020181.1|WP_032705602.1|2282329_2283532_-|serine-type-D-Ala-D-Ala-carboxypeptidase
MTHDAFSLRGLAAGCALLLLVAPAVQAADQLPDAPSIDARAWILMDYASGKVLSEGNADEKLDPASLTKIMTSYVVGQALKAGKIKLTDTVTVGRDAWATGNPALRGSSVMFLKPGMQVSVEDLNKGVIIQSGNDASIAIADYVAGSQDSFVNLMNGYAQKIGLTNTTFKTVHGLDAPGQFSTARDMALLTKAMIHDVPEEYAVHKEKEFTFNKIRQPNRNRLLWSTNLNADGVKTGTTAGAGYNLVSSATQGDMRLIAVVLGTKTDRIRFNESEKLLTWGFRFYETVTPIKPDATFISQRVWFGDSNEVKLGAGEAGSVTIPRGQLKNLKASYNLTEPQLTAPLAKGQVVGTIDFKLNDKTIEQRPLIVMEDVKEGGFFSRMVDFVLMKLHGWFGSWFS
>NC_020181.1|WP_015367546.1|2281542_2282301_+|DNA-binding-transcriptional-repressor-DeoR
METRRDERINQLIQALKRSDKLHLKEAASLLGVSEMTIRRDLNGHSGPVVLLGGYIVLEPRSATHYLLSDQKTRLVDEKRRAARHAAGLLEAHQMAFFDCGTTTPWIIDAIDNELPFTGVCYSLNTFLALQEKPLCRAILCGGEFHASNAIFLPLSLQDTLSHLSPDIAYYSAAGIDCEQGATCYNLEELPVKHWAMNNARYHVLVVDHSKFGKVRPARMGELSRFDVIASDVRPDDDLLALAKEKQISLLY
>NC_020181.1|WP_015367545.1|2280862_2281456_+|undecaprenyl-diphosphate-phosphatase
MLENINYALFALINATPASSWWAIEVATFIAKDLIIIVPLLVVALWLWGPNQRQLVFKVMLALALSLSISWVIGHLFPHDRPFVDGVGYNFLHHAADDSFPSDHGTVIFTFALAFLFWHRVWSGALLLVIASAIAWSRVYLGVHWPLDMLGGLLAGMCGCLGSQLLWQSGGHGLYQRLQRLYRLCFSLPIRKGWVRG
>NC_020181.1|WP_015367543.1|2279326_2280559_-|multidrug-efflux-MFS-transporter-KdeA
MQNYSLSGKRLGRQALLFPLCLVLYEFSTYIGNDMIQPGMLAVVQEFQVGNEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLTGVVWFIVTCLATLLAQTIEQFTLLRFLQGISLCFIGAVGYAAIQESFEEAVCIKITALMANVALIAPLLGPLVGAAWVHMLPWEMMFVLFAVLAAISFVGLQRAMPETATRMGEKLSVKELGRDYRLVLKNLRFVAGALATGFVSLPLLAWIAQSPVIIISGEQATSYEYGMLQVPIFGALIAGNLVLARLTSRRSVRSLIIMGGWPIMFGLLLSAAATVVSSHAYLWMTAGLSFYAFGIGLANAGLVRLTLFASEMSKGTVSAAMGMLQMLIFTVGIELSKHAYELGGNGLFSLFNLLGGVLWLGLIIYFLKDKSVGSSQQA
>NC_020181.1|WP_015367542.1|2278472_2279285_+|HAD-family-hydrolase
MSIKLIAVDMDGTFLSDAKTYNRPRFLAQYQRMREQGIRFVVASGNQYYQLISFFPELVDEIAFVAENGGWVVSGKEDIFNCQLPTTHFNAVVDHLQTLPHIEIIACGKRSAYTLNSYNDELKAVAAKYYHRLELVDDFNHLDDAILKFGLNVPDHLIPEIQPKLHAALGDMVTAVATGYGSIDLIIPGVHKANGLRILQERWGIDNHEVVAFGDSGNDIEMLQHAGFGFAMANAKAEVKAVASHHAPHNNEEGVLHIIDKVLNREAPFA
>NC_020181.1|WP_015367541.1|2277270_2278473_+|MFS-transporter
MTAQTSRKALQLRLWALFMFFFIPGLLMASWATRTPAIRDLLTLSTAEMGMVLFGLSIGSMSGILCSAWLVKRFGTRKVIRTTMLCAVAGMLVLSLALWLASAPLFAFGLAIFGASFGSAEVAINVEGAAVEREMNKTVLPMMHGFYSFGTLVGAGIGMAVTGFGLPAAPHILIAALVAIAPILIAIRAIPDGTGKNAAESAHSEAKGLPVWRDVQLLLIGVIVLAMAFAEGSANDWLPLLMVDGHGFSPTSGSLIYAGFTLGMTLGRFTGGWFIDRYSRVTVVRASAVMGALGIGLIIFVDSTWVAGVSVLLWGLGASLGFPLTISAASDTGPDAPKRVSVVAITGYLAFLVGPPLLGFLGEHFGLRSAMMVVLGLVMVAALVARAVAKPQPEPVMENS
>NC_020181.1|WP_015367553.1|2287800_2288712_-|glutathione-ABC-transporter-permease-GsiD
MRLLNWRREAVINAMPGVKPGQIRTPWHEFWRRFRRQPVAMAAGLFVLLLIIVAIIAPWIAPYDAENYFDYDRLNEGPSMVHWFGVDSLGRDIFSRVLVGAQISLAAGVLAVLIGALIGTVLGLLAGYYEGWWDRITMRICDVLFAFPGILLAIAVVAVMGSGMANVIIAVAIFSIPAFARLVRGNTLVLKQQTFIESARSIGASDTTILFNHILPGTVSSIVVYFTMRIGVSIISAASLSFLGLGAQPPTPEWGAMLNEARADMVMAPHVALFPAIAIFLTVLAFNLLGDGLRDALDPKIKG
>NC_020181.1|WP_015367554.1|2288713_2289634_-|glutathione-ABC-transporter-permease-GsiC
MLNYVLKRLLGLIPTLFIVAVLVFLFVHMLPGDPARLIAGPEADAQVVAMVRQQLGLDQPLHVQFWHYITNVLQGDFGISMASRRPVTSEIASRFMPTLWLTLASMSWAVLFGMAAGIAAAVWRNRWPDRLGMALAVTGISFPAFALGMLLMQVFSVELGWLPTVGADSWRHYILPSLTLGAAVASVMARFTRASFVDVLHEDYMRTARAKGVSETLVVLKHGLRNAMIPVVTMMGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEVLLFSLEFILINLVVDVMYAAINPAIRYK
>NC_020181.1|WP_015367555.1|2289680_2291222_-|glutathione-ABC-transporter-substrate-binding-protein-GsiB
MTQPVTRKWLLALGIASALAATPAFAAKDVVVAVGSNFTTLDPYDANDTLSQAVAKSFYQGLFGLDKEMKLQNVLAESYTVSADGLVYTIKLHSGVKFQDGTDFNAEAVKANLDRASNPDNHLKRYNLYKNIASTEAVDPTTVKITLKQPFSAFINILAHPATAMISPAALKKYGKEIGFHPVGTGPYKLDTWNQTDFVKVSKFDGYWQPGLPKLDSITWRPVVDNNTRAAMLQTGEAQFAFPIPYEQAPLLAKNSKLELVASPSIMQRYISMNVTQKPFDNPKVREAINYAINRQALVKVAFAGYATPATGVVPPSIAYAQTYSAWPYDPAKARQLLKEAGFPNGFSTTLWSSHNHSTAQKVLQFTQQQLAQVGIKAQVTAMDAGQRAAQVEGKGQKESGVRMFYTGWSASTGEADWALSPLFASQNWPPTLFNTAFYSNPQVDKDLSEALKTTDAQQKTTLYKDAQDIIWKESPWVPLVVEKLVSAHSKNLTGFYIQPDTGFSFEQADLTQ
>NC_020181.1|WP_015367556.1|2291255_2293109_-|glutathione-ABC-transporter-ATP-binding-protein-GsiA
MPQSHEIDEDDVLVVRDLNVAFSQQRQRVSAVRNLSFSLRRGETLAIVGESGSGKSVTALALMRLLDGAVSEVSSEALLLRRRNRQVIDINAQTAGQMRQVRGADVAMIFQEPMTSLNPVFTIGEQIAESIRLHQGLRHDEALREAKKMLERVRIPEAEAMLSRYPHQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIAALQKEMAMGVMFITHDMGVVAEIADRVLVMYRGEAVESGRVEDIFRAPQHPYTRALLAAVPKLGSMRGSDLPRRFPLLNDGVTQQPEQNTVVAGKPILQVRDLVARFPIRGGILNRVTREVHAVEKVSFDLWPGETLSLVGESGCGKSTTGRALLRLVEAQGGSITFNGQRIDALSGGKLQTLRRDIQFIFQDPYASLDPRQTVGYSIMEPLRVHGLLEGDAARERVAWLLQRVGLEAEHAWRYPHEFSGGQRQRICIARALALNPKVVIADESVSALDVSIRAQIINLLLDLQREMGIAFLFISHDMAVVERISHRVAVMYRGRIVEIGPRRAVFENPQHPYTRKLMAAVPVADPAHRQPQRVLLSDELPGNIYKPGEEIDSAPLQLVAPGHYVAREPADVLSR
>NC_020181.1|WP_015367557.1|2293123_2294065_-|beta-aspartyl-peptidase
MGKAVIAIHGGAGAISRAQMTQAREREYVAALSAIVDSGQKMLAAGASALDAVTEAVRLLEECPLFNAGIGSVFTHDQTHELDACVMDGYSLQAGSVAGVKHLRNPVLAARLVLEESPHVLLIGEGAEKFAASRGMALVENELFSTTERLLQLQQAKEGGEIILDHHAAPLDERHKMGTVGAVALDLAGNLAAATSTGGMTNKLPGRVGDSPVPGAGCYANNASVAVSCTGTGEVFMRTLAAYDISALMEYGNLSLFEACERVVQEKLPALGGSGGLIAIDREGNVVLPFNSEGMYRAWCYAGDTPTIGIYRE
>NC_020181.1|WP_015367558.1|2294244_2295480_+|molybdopterin-molybdotransferase-MoeA
MDFTAGLMPLDTALTQMLDRISPLQATETLPLLQAFSRVTAHDVVSPLDVPGFDNSAMDGYAVRLADLTDGAALPVAGKAFAGQPFHDAWPAGTCIRIMTGAPVPEGCDAVVMQEETEQTDAGVRFIAPVKAGQNIRRRGEDIANGAVVFPAGTRLTVAELPVLASLGIADVEVVRKVRVAVFSTGDELQLPGQPLGDGQIYDTNRLAVHLMLEQLGCEVINLGIIPDDPAKLRDAFIAADQQADVVISSGGVSVGEADYTKTILEELGEIGFWKLAIKPGKPFAFGKLSNSWFCGLPGNPVSATLTFYQLVQPLLAKLSGNRGQTQPMRLRVRAASRLKKSPGRLDFQRGVLQRNPEGELVVSTTGHQGSHIFSSFSLGNCFIVLERERGNVEAGEWVEVEPFNHLFGGL
>NC_020181.1|WP_015367559.1|2295479_2296235_+|molybdopterin-synthase-adenylyltransferase-MoeB
MAVELSDEEMLRYNRQIVLRGFDFDGQERLKAARVLVVGLGGLGCAAAQYLAAAGVGQLTLLDFDTVSLSNLQRQTLHSDATIGQPKVDSARDALARINPHVRLVTIDAMLDDAALATQIADHHLVLDCTDNVAVRNQLNAGCFQHKTPLVSGAAIRMEGQISVFTYQDGEPCYRCLSRLFGENALTCVEAGVMAPLVGTIGSLQAMEAIKLLTGYGTPAWGKIVMYDAMTCQFREMKLMRHPQCEVCGSR
>NC_020181.1|WP_015367560.1|2296390_2297290_+|glycyl-radical-enzyme-activating-protein
MIFNIQRYSTHDGPGIRTVVFLKGCSLGCRWCQNPESRARSEDLLYDARLCLDGCELCQQAAPEVITRTLDGLIIHRQNVNDAHIAALRHCCPTTALTVCGEEKSVADIMATVLRDKPFYDRSGGGITLSGGEPFMNPTLAQALFEASHQAGIHTAVETCLHVPWKYIEPSLPFVDLFLADLKHVDEAVFQQWTDGSARRVLDNLQRLAQAGKKIIIRVPLIQGFNASEADITAITDFAADRLQVSEIHFLPYHTLGMNKYQLLSQPYTAPDKPLAAPELLAFAQQYAQSKGLTATLRG
>NC_020181.1|WP_015367561.1|2297293_2299726_+|formate-C-acetyltransferase/glycerol-dehydratase-family-glycyl-radical-enzyme
MTTLKLDTLSARIQAHKMALVHIVKPPVCTERAQHYTAAYQQHLDKPIPVRRALALAHHLAERTIWIKHDELIVGNQASEVRAAPIFPEYTVSWIEKEIDDLADRPGAGFSVSEANKRVLHEVCPWWRGQTVQDRCYGMFTDEQKALLATGIIKAEGNMTSGDAHLAVNYPLLLEKGLDGMRAKVAERRSRINLTVLEDLHGEQFLKAIDIVLAAVSEHCKRFATLARDMAAQEPRELRRNELLAIAENCEIIAHQPPKTFWQALQLCYFIQLILQIESNGHSVSFGRMDQYLYPYYRRDVELQQSLDREQAIELLHCCWLKLLEVNKIRSGSHSKASAGSPLYQNVTIGGQNLVDGQPQDAVNPLSYAILESCGRLRSTQPNLSVRYHAGMSNDFLDACVQVIRCGFGMPAFNNDEIVIPEFIKLGIEPQDAYDYAAIGCIETAVGGKWGYRCTGMSFINFARVMLATLEGGRDATSGQVFLAQQHALSKGNFANFDQVLEDWDTQIRYYTRKSIEIEYVVDTMLEENVHDILCSALVDDCIERAKSIKQGGAKYDWVSGLQVGIANLGNSLAAVKKLVFDQGVIGQQELAKALAEDFAGLTHEQLRQRLINGAPKYGNDDDSVDILLARAYQTYIDELKQYHNPRYGRGPIGGNYYAGTSSISANVPFGAQTMATPDGRKAHAPLAEGASPASGTDHLGPTAVISSVGKLPTGAILGGVLLNQKLNPSTLENESDKQKLMVLLRTFFEVHKGWHIQYNIVSRETLLEAKKHPDQYRDLVVRVAGYSAFFTALSPDTQDDIIARTEHTL
>NC_020181.1|WP_015367562.1|2299876_2300692_+|HAD-family-hydrolase
MTVKVIVTDMDGTFLNDAKQYDRPRFLAQFAQLKQQGIEFVVASGNQYYQLISFFPEIREQISFVAENGALVYEHGKQVFHGELTRHESQVVIGELLKDPQLNFVACGLQSAYVSDKAPDAFVELMSKHYHRLQRVSDYHRIDDTLFKFSLNLPDSDIPQLIDKLHVSLDGIMKPVTSGFGFVDLIIPGLHKANGISRLLKRWNLSPQQCVAIGDSGNDAEMLKLVKYAFAMANAADSIKAIAGFTTDDNNHDGALKVIQAVLDKTSPFND

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Crispr_ID: NC_020181_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_020181_2

3336215-3336299

Orphan

Consensus_repeat	Method
TAAAAGGGTGATGCCACTGGCATCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_020181_2

>merge|NC_020181|2|3336215-3336299|CRISPRCasFinder
TAAAAGGGTGATGCCACTGGCATCACATAAACACCTATCAATCCGGCGCCAATCAATAGATAAAAGGGTGATGCCACTGGCATCA

>NC_020181|2|2|3336215-3336299|CRISPRCasFinder
TAAAAGGGTGATGCCACTGGCATCA	CATAAACACCTATCAATCCGGCGCCAATCAATAGA
TAAAAGGGTGATGCCACTGGCATCA

Protein	Signature genes	Signature genes Name	Protein_function
NC_020181.1\|WP_000044289.1\|3328843_3330199_+\|replicative-DNA-helicase	unknown	unknown	gnl\|CDD\|273206
NC_020181.1\|WP_001060567.1\|3330195_3331680_+\|chromosome-partitioning-protein-ParB	unknown	unknown	gnl\|CDD\|213858
NC_020181.1\|WP_001314390.1\|3334218_3335547_-\|type-II-toxin-antitoxin-system-HipA-family-toxin	unknown	unknown	gnl\|CDD\|341493
NC_020181.1\|WP_001291904.1\|3342874_3343291_+\|DUF3577-domain-containing-protein	unknown	unknown	gnl\|CDD\|371899
NC_020181.1\|WP_000124689.1\|3343411_3343876_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|163460
NC_020181.1\|WP_000863683.1\|3333420_3334092_-\|hypothetical-protein	unknown	unknown	unknown
NC_020181.1\|WP_001230900.1\|3339777_3340815_-\|hypothetical-protein	unknown	unknown	unknown
NC_020181.1\|WP_001287071.1\|3341127_3341826_+\|TIGR03761-family-integrating-conjugative-element-protein	unknown	unknown	gnl\|CDD\|274771
NC_020181.1\|WP_001314389.1\|3335551_3335857_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|376540
NC_020181.1\|WP_000981784.1\|3341815_3342310_+\|DUF3158-family-protein	unknown	unknown	gnl\|CDD\|314329
NC_020181.1\|WP_000919735.1\|3343868_3344477_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|269894
NC_020181.1\|WP_015368502.1\|3336407_3338720_+\|autotransporter-outer-membrane-beta-barrel-domain-containing-protein	unknown	unknown	gnl\|CDD\|273608
NC_020181.1\|WP_015368501.1\|3332221_3333355_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	unknown
NC_020181.1\|WP_000823396.1\|3328476_3328851_+\|hypothetical-protein	unknown	unknown	unknown
NC_020181.1\|WP_001255484.1\|3344483_3345134_+\|TIGR03759-family-integrating-conjugative-element-protein	unknown	unknown	gnl\|CDD\|274770
NC_020181.1\|WP_000785012.1\|3327595_3328480_+\|ParA-family-protein	unknown	unknown	gnl\|CDD\|224113
NC_020181.1\|WP_000938043.1\|3331663_3332203_+\|DUF2857-domain-containing-protein	unknown	unknown	gnl\|CDD\|378591
NC_020181.1\|WP_045368387.1\|3326693_3327251_-\|hypothetical-protein	unknown	unknown	unknown
NC_020181.1\|WP_015368503.1\|3338826_3339420_+\|hypothetical-protein	unknown	unknown	unknown
NC_020181.1\|WP_001149395.1\|3342358_3342508_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NC_020181.1\|WP_000044289.1\|3328843_3330199_+\|replicative-DNA-helicase	gnl\|CDD\|273206	TIGR00665, DnaB, replicative DNA helicase. This model describes the helicase DnaB, a homohexameric protein required for DNA replication. The homohexamer can form a ring around a single strand of DNA near a replication fork. An intein of > 400 residues is found at a conserved location in DnaB of Synechocystis PCC6803, Rhodothermus marinus (both experimentally confirmed), and Mycobacterium tuberculosis. The intein removes itself by a self-splicing reaction. The seed alignment contains inteins so that the model built from the seed alignment will model a low cost at common intein insertion sites. [DNA metabolism, DNA replication, recombination, and repair].	0
NC_020181.1\|WP_001060567.1\|3330195_3331680_+\|chromosome-partitioning-protein-ParB	gnl\|CDD\|213858	TIGR03764, ICE_PFGI_1_parB, integrating conjugative element, PFGI_1 class, ParB family protein. Members of this protein family carry the ParB-type nuclease domain and are found in integrating conjugative elements (ICE) in the same class as PFGI-1 of Pseudomonas fluorescens Pf-5.	5.33269e-132
NC_020181.1\|WP_001314390.1\|3334218_3335547_-\|type-II-toxin-antitoxin-system-HipA-family-toxin	gnl\|CDD\|341493	cd17808, HipA_Ec_like, type II toxin-antitoxin sytem toxin HipA from Escherichia coli and similar proteins. This family contains type II toxin-antitoxin (TA) system HipA family toxins similar to Escherichia coli HipA, a serine/threonine-protein kinase that phosphorylates Glu-tRNA-ligase (GltX), preventing it from being charged, leading to an increase in uncharged tRNA(Glu). This induces amino acid starvation and the stringent response via RelA/SpoT and increased (p)ppGpp levels, which inhibits replication, transcription, translation and cell wall synthesis, reducing growth and leading to persistence and multidrug resistance. HipA is the toxin component of the HipA-HipB TA module that is a major factor in persistence and bioflim formation; its toxic effect is neutralized by its cognate antitoxin HipB. HipA, with HipB, acts as a a corepressor for transcription of the hipBA promoter. In the Escherichia coli HipAB:DNA promoter complex, HipA forms a dimer and each HipA monomer interacts with a HipB homodimer which binds DNA. The HipAB component of the complex is composed of two HipA and four HipB subunits.	0
NC_020181.1\|WP_001291904.1\|3342874_3343291_+\|DUF3577-domain-containing-protein	gnl\|CDD\|371899	pfam12101, DUF3577, Protein of unknown function (DUF3577). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are typically between 143 to 307 amino acids in length.	1.68895e-67
NC_020181.1\|WP_000124689.1\|3343411_3343876_+\|hypothetical-protein	gnl\|CDD\|163460	TIGR03748, conj_PilL, conjugative transfer region protein, TIGR03748 family. This model describes the conserved N-terminal region of a variable length protein family associated with laterally transfered regions flanked by markers of conjugative plasmid integration and/or transposition. Most members of the family have the lipoprotein signal peptide motif. A member of the family from a pathogenicity island in Salmonella enterica serovar Dublin strain was designated PilL for nomenclature consistency with a neighboring gene for the pilin structural protein PilS. However, the species distribution of this protein family tracks much better with markers of conjugal transfer than with markers of PilS-like pilin structure. [Mobile and extrachromosomal element functions, Plasmid functions].	1.39266e-40
NC_020181.1\|WP_001287071.1\|3341127_3341826_+\|TIGR03761-family-integrating-conjugative-element-protein	gnl\|CDD\|274771	TIGR03761, ICE_PFL4669, integrating conjugative element protein, PFL_4669 family. Members of this protein family, such as PFL4669, are found in integrating conjugative elements (ICE) of the PFGI-1 class as in Pseudomonas fluorescens.	9.48612e-92
NC_020181.1\|WP_001314389.1\|3335551_3335857_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|376540	pfam01381, HTH_3, Helix-turn-helix. This large family of DNA binding helix-turn helix proteins includes Cro and CI. Within Neisseria gonorrhoeae NGO_0477, the full protein fold incorporates a helix-turn-helix motif, but the function of this member is unlikely to be that of a DNA-binding regulator, the function of most other members, so is not necessarily characteristic of the whole family.	1.22362e-10
NC_020181.1\|WP_000981784.1\|3341815_3342310_+\|DUF3158-family-protein	gnl\|CDD\|314329	pfam11358, DUF3158, Protein of unknown function (DUF3158). Some members in this family of proteins are annotated as integrase regulator R however this cannot be confirmed. This family of proteins with unknown function appear to be restricted to Proteobacteria.	1.49578e-46
NC_020181.1\|WP_000919735.1\|3343868_3344477_+\|hypothetical-protein	gnl\|CDD\|269894	cd14447, SPX, Domain found in Syg1, Pho81, XPR1, and related proteins. This region has been named the SPX domain after (Syg1, Pho81 and XPR1). This domain is found at the amino terminus of a variety of proteins. In the yeast protein Syg1, the N-terminus directly binds to the G-protein beta subunit and inhibits transduction of the mating pheromone signal. Similarly, the N-terminus of the human XPR1 protein binds directly to the beta subunit of the G-protein heterotrimer leading to increased production of cAMP. These findings suggest that members of this family are involved in G-protein associated signal transduction. The N-termini of several proteins involved in the regulation of phosphate transport, including the putative phosphate level sensors Pho81 from Saccharomyces cerevisiae and NUC-2 from Neurospora crassa, are also members of this family. The SPX domain of S. cerevisiae low-affinity phosphate transporters Pho87 and Pho90 auto-regulates uptake and prevents efflux. This SPX dependent inhibition is mediated by the physical interaction with Spl2. NUC-2 contains several ankyrin repeats. Several members of this family are annotated as XPR1 proteins: the xenotropic and polytropic retrovirus receptor confers susceptibility to infection with xenotropic and polytropic murine leukaemia viruses (MLV). Infection by these retroviruses can inhibit XPR1-mediated cAMP signaling and result in cell toxicity and death. The similarity between Syg1, phosphate regulators and XPR1 sequences has been previously noted, as has the additional similarity to several predicted proteins, of unknown function, from Drosophila melanogaster, Arabidopsis thaliana, Caenorhabditis elegans, Schizosaccharomyces pombe, S. cerevisiae, and many other diverse organisms.	0.000250427
NC_020181.1\|WP_015368502.1\|3336407_3338720_+\|autotransporter-outer-membrane-beta-barrel-domain-containing-protein	gnl\|CDD\|273608	TIGR01414, Contains:_AIDA-I_translocator, outer membrane autotransporter barrel domain. A number of Gram-negative bacterial proteins, mostly found in pathogens and associated with virulence, contain a conserved C-terminal domain that integrates into the outer membrane and enables the N-terminal region to be delivered across the membrane. This C-terminal autotransporter domain is about 400 amino acids in length and includes the aromatic amino acid-rich OMP signal, typically ending with a Phe or Trp residue, at the extreme C-terminus. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis].	5.41153e-65
NC_020181.1\|WP_001255484.1\|3344483_3345134_+\|TIGR03759-family-integrating-conjugative-element-protein	gnl\|CDD\|274770	TIGR03759, conj_TIGR03759, integrating conjugative element protein, PFL_4693 family. Members of this protein family, such as model protein PFL_4693 from Pseudomonas fluorescens Pf-5, belong to extended genomic regions that appear to be spread by conjugative transfer. Most members have a predicted N-terminal signal sequence. The function is unknown. [Mobile and extrachromosomal element functions, Plasmid functions].	1.23379e-84
NC_020181.1\|WP_000785012.1\|3327595_3328480_+\|ParA-family-protein	gnl\|CDD\|224113	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning].	1.58689e-34
NC_020181.1\|WP_000938043.1\|3331663_3332203_+\|DUF2857-domain-containing-protein	gnl\|CDD\|378591	pfam11198, DUF2857, Protein of unknown function (DUF2857). This is a bacterial family of uncharacterized proteins.	1.35928e-72

>NC_020181.1|WP_001314389.1|3335551_3335857_-|helix-turn-helix-transcriptional-regulator
MNTVYPLKTLNQIRPLLIGFRKANGLTQKEVSERLGVTQQTYARLEANPASASMERLFRVFTVLGVEMVLSSGPQILSSMSSSTMDESEQQKDSPARREKW
>NC_020181.1|WP_001314390.1|3334218_3335547_-|type-II-toxin-antitoxin-system-HipA-family-toxin
MRRTQQRLAIWMNGIRVGFWEKARGEDSLQYLPEWVVDEQGRPLSLSLPFTPGNQLWRGNVVRDYFDNLLPDSEGIRRRLAVRYQSESLEPFDLLAELGRDCVGAIQLLDVDEEPTDLFSVNYRPLSEADIATTLRNTTAASLPGRQDETDDLRLSIAGAQEKTALLWHEEQWCLPEGNTPTTHIFKLPLGLVGNMQADMSTSVENEWLCSLLLEHYGIPVAKTQIAQFEDQKALVVERFDRRWSGDRQWIIRLPQEDMCQALGVSPLRKYQSDGGPGISDIMDILSHSDQAEQDKEQFFRAQIIFWLLAATDGHAKNFSIAIEPQSHYHLTPLYDVLSAWPVIGHGNNQISWQRCKLAMAVRGSSNYYHIYRIQRRHWINHGELTGLGRRQVESMMDDIISSTPEVIERVSMLLPESFPPELAECIFEGMRQQCRRLAGRE
>NC_020181.1|WP_000863683.1|3333420_3334092_-|hypothetical-protein
MAFEWKEIITPVATLTAVWLGARFTLRNELRKKTLEIQSEKLELLFTECSNVLKDINRVSLAVLHTLDDFIPTTESEGSVPEQEIQDALRAYREKGVVIDFDAITACQHKLEFHRPKEYQAWIVALIPLLGTLTKMTPYNNMNPIAEADNRKWSHQELTLYRQELDEKRNALPILRKRLTSAMASDYRQLGLSSEPANFWVYVERWKRVVNAFFHKPPTSPLT
>NC_020181.1|WP_015368501.1|3332221_3333355_+|helix-turn-helix-domain-containing-protein
MTPYIQALIAMTGDKLQQRMQKDPTSASDSLLFMGNQHDTVPRRLLQDPLLSPKDKFAWQVIRMQAQDNGGAVFPSYSELQVQLSNRPQDEKASRSTVSRALLMLRLTRWLSLCHKARDRVSGRILGNIYALHDEPLTVLDAVRFDASYLHLLEQCSRHENKAIRATAQGILYDIRQDTSLRYLSSRIELLEERARWQQRQSPEETKPETSGLNTVPGKISPGTETRLSLKPGPDGVVSNQDQAPVRTVPTDLCNSTTARANDSPPYWPPEIPLTHPEKQLVLQAMQNLSSPLRQNVLDDAAQRVARGGIQNPLAYLLATLRKAQGGEFNQYRRGKATVPEFVRPVVSEPEIPVEPRKKRDISKLVAEIRAQCLGSG
>NC_020181.1|WP_000938043.1|3331663_3332203_+|DUF2857-domain-containing-protein
MLPTINQAVLSQVIQALKDGNVRYCEALGFDREELNELNALTFEELMHMGNTSAQFLKITINHDVLRKMLVQVRQEQKFQQLVGQAVQLGGSIALISHYFGISTAEISARRRLMGIHVRQGRNQVPGEEEEAALWNRWQEIKVDNIDSIPALEAMMLLAQERSLSLTVVWNLIRQWEKS
>NC_020181.1|WP_001060567.1|3330195_3331680_+|chromosome-partitioning-protein-ParB
MNNKLTSTELQSRLLQGNFDRGRSLDERFADPLTETSMIVTLEQLRPYDLNPRLMRNPSYDDIKESIRRRGLDTPPPITRRPDQEWFIIANGGNTRLSILNELWRETHDERFWRIQCLYKPWAGTSDQPMLGELRCLIGHLAENDMHGKLSFIERALGINKARELYQQVEECQLSQRELAEHLKSDGYPINQSHISRMEQALEYLLPCIPEVLYAGMGRSQVEKLLSLRAASLHLWQRHAAEDVGSFDDLFSSALSLFNDQPEDFAIERVQDELLGLMSQELNVDYNLLLLDVDPSEQKRQAVLGPTPEPPPYIPPEKPEPRPIARRRKPETEEDKVGAPAPLPEPEEAPSLLCEGTEPVTDIWRIPQLWDTTESLRSVSDRLAWDLAEHYAIDDRIISDTDVNGIGFQVMPFASGHPMFTRPQSRACWALLAALNEIPLTEDLASALTPTLFFQHDADGFFFSDEFLIKAFRLIRIVRRIKEFQQEAQHAADD
>NC_020181.1|WP_000044289.1|3328843_3330199_+|replicative-DNA-helicase
MSKRKRPQPPHSVEAEQSVLGGLMLDNDRWDDVATQISAQDFFISAHRTIYSHMQTLVEQGNPIDLITLSESLEQQEQLEQVGGFAYLAELSKNTPSAANIIPYAQYIASYGELRQLLLLGNELSDMAGQPRSNVADVLNFAEQKLFAIAQSYQEGGLTDINACFDNVLAGIAQRYEAERGSLSGTPSGLEQLDTLTCGFQPADLIIAAARPSVGKTAFALTLCVNALMLRPAQPVQIYSMEMSAEQLLLRLVSLIGRVSQTRLRSGDLSDNDWQQIGISANVLMTEWKDRLLLDDSGILTPSLLRSRARRSLRQHGIPSLIVVDYLQLMRCGGAENRNQEISTISRSLKALAKELNCPVLALSQLNRALESRLNKRPCNADLRDSGSIEQDADVILFLYRDELYDPNTLDRGIAEVIVSKQRNGPIGTVRTRFISDQTRFESLSQQGVES
>NC_020181.1|WP_000823396.1|3328476_3328851_+|hypothetical-protein
MKRKIWRAFCSYYAQHPFEKDDEVIVFFEAADREEARETLPVLMSLLWHIPPEKVDCYNLEDENELRDTSGSLTSPRDWPLFEIGWSNNKPLYSSDLPLLLLPPHQQTRLWEAFLACQEGNRDE
>NC_020181.1|WP_000785012.1|3327595_3328480_+|ParA-family-protein
MKNADAIDLPTLIAAILSTKGGVAKTTDTANLGGYLADQGLKVLMIDADIRQPTLSSYYPLDNEAPGGIYELIAQNELDPAIIISHTSIPGLDIIISNDPRGELMSLLQAAPDGVIRLRHLVRQITGYDVILIDTIGARTIALEMVLLASDLIISPVLPEMLSAREFLRGTLQMYRDLQPFTRYGIPLPPLKAVINKLDHTNDAREIHHNLLQVLQHKQKEQELLVPTEILMTPVYASVAYRRAASLGMPVHRLDAARPKGRTTPCAAETMQMLAKELFPQFLALPHQQMEGIA
>NC_020181.1|WP_045368387.1|3326693_3327251_-|hypothetical-protein
MPVNERINATSGTRIKPGGTRLITTGEIGLSRALYNCGIRYNTVWIHRESYLPFNLQPIDIAMSPNGEMWFREDTYSHDFSMDILEKKHRFMHEMMHVWQAQRGMFVRTRGLFSHFADYSYSLDKADICHYGLEQQASLVSDYWLLLNYGFKGNTNLIKYRDYDPDESAHSLIEKYKSVMKGFPV
>NC_020181.1|WP_015368502.1|3336407_3338720_+|autotransporter-outer-membrane-beta-barrel-domain-containing-protein
MKIAPYLITLTLPFISLSAKADYHTQINAGNTVSGDIVDGSKGNQHVYGTLTNSTITGPYAYSYVGDGGQTNHITVTDHGELFLESGGSAYDTQITDDGDLQVNGYAENTYVDSGGQVYVNAGNNGIEDPEQGGQIVNTTVGAGGQVVNRYGIDTNTVVEAGGELDTGWNYPYEIRNTAISRNAVIQNGGIQQVSNGGTSEGSKVNDGGTLIVTGTWHYNVVTDSQPSAWYSGTADDSAVYGTMQNQGGLDENTTVQSGGQYTLSGYGLSHQLTVAQGGSAQINNGVLDSFWLYGMMNVSSQATLTGTGTVGSSGELVLNEGAKTSGLTLALDGVLSLQNSSDAGPHNYQIAGLEMDGGTVLFDPASFATLNMKTLSGNGNFWMNTDIATQQGDMINVSGEANGDFGIWINDTGDPPADPQSLQVVQTGGGDAQFTLLNPNQQVDIGTWEYGLTPDGQGNWSLTPQATPTPSTEAVLAMANVTPTIFQAEASALQTRLDVTRSRPHQGELWMQALSNRFDVNRTGNAAYRQRLGGLMMGYDRSLPRQTGLLTLGIAGGYSRSDLDLINDSDGSVDSYSAALYASYYDQSRFWLDGMLKGNLFNQHLNVRMSSGGYADGSYTIPGLGSSLVAGYDARFANTKLSPFVGFTGFISQSDNYWLSNGMQAHPGTAKSALGQVGFRLRQNITTHHGMQFIPWLKVALEQEFVHNNLVRVNDDNFNNDIAGTRGSYQAGISAALTQHTHIYASINYEKGDGMESPWTGNIGFNYSF
>NC_020181.1|WP_015368503.1|3338826_3339420_+|hypothetical-protein
MSLLESFGKALIILLEAFLGKRKGQEEAHNKFLNEYTKENCNHRLVEYWFCQFTGWRYAKYRDICFIMTSSDPSKILYMAKGINYIARTVEFIDSGECKLSDRYKEKKKHTFLFLFISFLIIFFILIVWMISSVMSLITHYHDVTLMAINISSIIAGAIFIMCFAFFIHAITMEFFAFEKAEHFVKSYNAERTPSGH
>NC_020181.1|WP_001230900.1|3339777_3340815_-|hypothetical-protein
MRKNPTNAFRESYLEAQKYKKEKNRKLGVKVFHALLKSFVFFAMVIYLTQSLVKIGTPIVLTEFLSENKTPFIILPIILVFFAGVIGVISSRKIKAIDYEPDSHSSLKIRISALQKAIDACREQQGRLHEDVTNYLDGDSRNELYETIYSSLKNEASGSLLCELEEKVKSNTTLIDVKDYFLDMQTRLNQRASSLNTVSFINLFIGISIATIGISILLYFVFNTDYVNTDKTVLLIEMMSKLGVSFGIELLSFFFLNLYRKNLQEIKYIQNELTNIEAKKISLTMAHDLPTDLKFKIIKSISMTERNFILEKGQTTSDLETLKYEKMDIAALLKASPELIKALKH
>NC_020181.1|WP_001287071.1|3341127_3341826_+|TIGR03761-family-integrating-conjugative-element-protein
MSDYTFNMGPLRSAIHIQLHTHNATRLWTGRRATESGPAPIIGMPRFIEILNQMRIAAEHNDPYADLWMLRMEEKLVQSRKLMQVMLDQAKAMFSELPEGIDIENCFNVQPARFPLFINAPLAYQGVYLLTDFDQLARQLLLASHIAVISRREMHNRLNNGATVIRSAFGLAQKYHGSGLTRQDFIDDTPQARAAVERLGPLPEAILSGKLRSSFSSPLPGKTDNPGAADDE
>NC_020181.1|WP_000981784.1|3341815_3342310_+|DUF3158-family-protein
MMNNSITSYQSLADEDYKMLAYVSSLKGLLKPFKSKGELELLESNARSVREMMEPLMQRLIQSARRYPVRQLPLIFTIGPAPSGANFLRWRNQQNNKSGTPAFCNLIGNPKIPQRARDALLEIERDRIVFNMQMSVLTFIIRQARECQEKMEQAEMLYQGQQNS
>NC_020181.1|WP_001149395.1|3342358_3342508_-|hypothetical-protein
MQAVRADSETAVAWLSTRNDTEQERKGCFARRERHEREQAKQTALLGMA
>NC_020181.1|WP_001291904.1|3342874_3343291_+|DUF3577-domain-containing-protein
MSEKTYFNLYTSGLGYVNRVRTVTPKRGEPFLCCDIAALSGAADDVDYVRFDCKVTGSEARKLIARCEQAVNEKRKVLIHFRLGDLYVDMFTYSKGERKGETGVSLKARLLYIGLVKIDGEVVWQAGNQETEAEDDAA
>NC_020181.1|WP_000124689.1|3343411_3343876_+|hypothetical-protein
MARTTGWVITLLMLGGCTAPQQPVAPAPKPATPPAPEVVRYDRYLLINTHPDEAQRNPLHQIVNINLPLNLKLTVGDAFTWLLKQSGYSLCVDDHPTQFLAGKPLPLSQYRLGPMRLEDALKTLAGPGWLMQTDVLNREVCFHLNTPGTGDHHA
>NC_020181.1|WP_000919735.1|3343868_3344477_+|hypothetical-protein
MLKRLAYLTTGAALLLLAAAVFWCFNCLNTLTLTQQQTQRQITQWRDQPQPDSDYHELKVAVKNIADRTEALARQLNDAASVQAERLHPITEQLRVLEGQIQTLSASYQHLQQQTATCSRAKAKRPVPSPLWAAKAPFSLISSEFRAGRQFAVIAPSGYRSLSQLQLVAPGDSVQGWQLLQLDGSHASFRKGGQRLTLNTGG
>NC_020181.1|WP_001255484.1|3344483_3345134_+|TIGR03759-family-integrating-conjugative-element-protein
MRRYLPLCLLLLPLFASPQQTRIEEQAITHTQAQQWGLTDSEWQRYQQLHQGERGIWSPGLDPLTTLGVEANNDAERQRFAELLARKEHQRVEKELAFQRAYDQAWKRLYPTLTPIRSVVQPRLALFVSEKCPACETLAQKLINDDRPLDIWLVNSRNDDASLQRWAQRQHIDMRKVERGQITLNHDNGRWQRLGGGKLPLLLEQQGEQWRPVSAP

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Crispr_ID: NC_020181_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_020181_3

4785885-4785999

Orphan

Consensus_repeat	Method
GCGGCTACGCCTTATCCGGGCTACCCAAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_020181_3

>merge|NC_020181|3|4785885-4785999|CRISPRCasFinder
GCGGCTACGCCTTATCCGGGCTACCCAACGATGCGTACCCGTAGCCCGGCTGAGCGCAGCGCGAGCCGGGGAAACCTTCCCGGATGGCGGTTACGCCTTATCCGGGCTACCCAAC

>NC_020181|3|3|4785885-4785999|CRISPRCasFinder
GCGGCTACGCCTTATCCGGGCTACCCAAC	GATGCGTACCCGTAGCCCGGCTGAGCGCAGCGCGAGCCGGGGAAACCTTCCCGGATG
GCGGTTACGCCTTATCCGGGCTACCCAAC

Protein	Signature genes	Signature genes Name	Protein_function
NC_020181.1\|WP_015369779.1\|4778886_4780089_+\|FAD-dependent-2-octaprenylphenol-hydroxylase	unknown	unknown	gnl\|CDD\|236139
NC_020181.1\|WP_015703432.1\|4775780_4776359_+\|YecA-family-protein	unknown	unknown	gnl\|CDD\|234976
NC_020181.1\|WP_015369777.1\|4776384_4777701_+\|Xaa-Pro-aminopeptidase	unknown	unknown	gnl\|CDD\|182804
NC_020181.1\|WP_015369778.1\|4777697_4778876_+\|2-octaprenyl-6-methoxyphenyl-hydroxylase	unknown	unknown	gnl\|CDD\|235584
NC_020181.1\|WP_008806429.1\|4792480_4793140_+\|hemolysin-III-family-protein	unknown	unknown	gnl\|CDD\|185044
NC_020181.1\|WP_002916480.1\|4780511_4781606_+\|glycine-cleavage-system-aminomethyltransferase-GcvT	unknown	unknown	gnl\|CDD\|234742
NC_020181.1\|WP_015369790.1\|4793238_4794222_-\|tRNA-modifying-protein-YgfZ	unknown	unknown	gnl\|CDD\|236567
NC_020181.1\|WP_015369789.1\|4792004_4792316_+\|ASCH-domain-containing-protein	unknown	unknown	gnl\|CDD\|179908
NC_020181.1\|WP_015369784.1\|4786516_4787128_-\|thioredoxin-domain-containing-protein	unknown	unknown	gnl\|CDD\|239321
NC_020181.1\|WP_015369786.1\|4789188_4789548_-\|copper-resistance-protein	unknown	unknown	unknown
NC_020181.1\|WP_004205298.1\|4775284_4775614_-\|cell-division-protein-ZapA	unknown	unknown	gnl\|CDD\|182874
NC_020181.1\|WP_015369780.1\|4781630_4782020_+\|glycine-cleavage-system-protein-GcvH	unknown	unknown	gnl\|CDD\|234918
NC_020181.1\|WP_015369783.1\|4786023_4786527_-\|protein-disulfide-oxidoreductase	unknown	unknown	gnl\|CDD\|239309
NC_020181.1\|WP_015369785.1\|4787129_4789139_-\|thioredoxin-family-protein	unknown	unknown	gnl\|CDD\|226685
NC_020181.1\|WP_015369775.1\|4774363_4774960_-\|5-formyltetrahydrofolate-cyclo-ligase	unknown	unknown	gnl\|CDD\|182385
NC_020181.1\|WP_015369791.1\|4794445_4794712_+\|FAD-assembly-factor-SdhE	unknown	unknown	gnl\|CDD\|182803
NC_020181.1\|WP_015369788.1\|4791225_4791954_-\|MurR/RpiR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224651
NC_020181.1\|WP_015369787.1\|4789672_4791106_-\|6-phospho-beta-glucosidase-BglA	unknown	unknown	gnl\|CDD\|184975
NC_020181.1\|WP_015369781.1\|4782150_4785024_+\|aminomethyl-transferring-glycine-dehydrogenase	unknown	unknown	gnl\|CDD\|235432
NC_020181.1\|WP_015369782.1\|4785084_4785828_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|182051

Protein	Function_ID	Function_description	E-value
NC_020181.1\|WP_015369779.1\|4778886_4780089_+\|FAD-dependent-2-octaprenylphenol-hydroxylase	gnl\|CDD\|236139	PRK08013, PRK08013, oxidoreductase; Provisional.	0
NC_020181.1\|WP_015703432.1\|4775780_4776359_+\|YecA-family-protein	gnl\|CDD\|234976	PRK01736, PRK01736, hypothetical protein; Reviewed.	1.57873e-121
NC_020181.1\|WP_015369777.1\|4776384_4777701_+\|Xaa-Pro-aminopeptidase	gnl\|CDD\|182804	PRK10879, PRK10879, proline aminopeptidase P II; Provisional.	0
NC_020181.1\|WP_015369778.1\|4777697_4778876_+\|2-octaprenyl-6-methoxyphenyl-hydroxylase	gnl\|CDD\|235584	PRK05732, PRK05732, 2-octaprenyl-6-methoxyphenyl hydroxylase; Validated.	0
NC_020181.1\|WP_008806429.1\|4792480_4793140_+\|hemolysin-III-family-protein	gnl\|CDD\|185044	PRK15087, PRK15087, hemolysin; Provisional.	9.93513e-138
NC_020181.1\|WP_002916480.1\|4780511_4781606_+\|glycine-cleavage-system-aminomethyltransferase-GcvT	gnl\|CDD\|234742	PRK00389, gcvT, glycine cleavage system aminomethyltransferase GcvT.	0
NC_020181.1\|WP_015369790.1\|4793238_4794222_-\|tRNA-modifying-protein-YgfZ	gnl\|CDD\|236567	PRK09559, PRK09559, putative global regulator; Reviewed.	0
NC_020181.1\|WP_015369789.1\|4792004_4792316_+\|ASCH-domain-containing-protein	gnl\|CDD\|179908	PRK04980, PRK04980, hypothetical protein; Provisional.	4.15277e-63
NC_020181.1\|WP_015369784.1\|4786516_4787128_-\|thioredoxin-domain-containing-protein	gnl\|CDD\|239321	cd03023, DsbA_Com1_like, DsbA family, Com1-like subfamily; composed of proteins similar to Com1, a 27-kDa outer membrane-associated immunoreactive protein originally found in both acute and chronic disease strains of the pathogenic bacteria Coxiella burnetti. It contains a CXXC motif, assumed to be imbedded in a DsbA-like structure. Its homology to DsbA suggests that the protein is a protein disulfide oxidoreductase. The role of such a protein in pathogenesis is unknown.	3.91961e-54
NC_020181.1\|WP_004205298.1\|4775284_4775614_-\|cell-division-protein-ZapA	gnl\|CDD\|182874	PRK10972, PRK10972, cell division protein ZapA.	3.38717e-64
NC_020181.1\|WP_015369780.1\|4781630_4782020_+\|glycine-cleavage-system-protein-GcvH	gnl\|CDD\|234918	PRK01202, PRK01202, glycine cleavage system protein GcvH.	9.15876e-73
NC_020181.1\|WP_015369783.1\|4786023_4786527_-\|protein-disulfide-oxidoreductase	gnl\|CDD\|239309	cd03011, TlpA_like_ScsD_MtbDsbE, TlpA-like family, suppressor for copper sensitivity D protein (ScsD) and actinobacterial DsbE homolog subfamily; composed of ScsD, the DsbE homolog of Mycobacterium tuberculosis (MtbDsbE) and similar proteins, all containing a redox-active CXXC motif. The Salmonella typhimurium ScsD is a thioredoxin-like protein which confers copper tolerance to copper-sensitive mutants of E. coli. MtbDsbE has been characterized as an oxidase in vitro, catalyzing the disulfide bond formation of substrates like hirudin. The reduced form of MtbDsbE is more stable than its oxidized form, consistent with an oxidase function. This is in contrast to the function of DsbE from gram-negative bacteria which is a specific reductase of apocytochrome c.	3.12599e-46
NC_020181.1\|WP_015369785.1\|4787129_4789139_-\|thioredoxin-family-protein	gnl\|CDD\|226685	COG4232, COG4232, Thiol:disulfide interchange protein [Posttranslational modification, protein turnover, chaperones / Energy production and conversion].	1.86087e-101
NC_020181.1\|WP_015369775.1\|4774363_4774960_-\|5-formyltetrahydrofolate-cyclo-ligase	gnl\|CDD\|182385	PRK10333, PRK10333, 5-formyltetrahydrofolate cyclo-ligase family protein; Provisional.	3.09604e-121
NC_020181.1\|WP_015369791.1\|4794445_4794712_+\|FAD-assembly-factor-SdhE	gnl\|CDD\|182803	PRK10878, PRK10878, FAD assembly factor SdhE.	2.85923e-47
NC_020181.1\|WP_015369788.1\|4791225_4791954_-\|MurR/RpiR-family-transcriptional-regulator	gnl\|CDD\|224651	COG1737, RpiR, Transcriptional regulators [Transcription].	1.55426e-57
NC_020181.1\|WP_015369787.1\|4789672_4791106_-\|6-phospho-beta-glucosidase-BglA	gnl\|CDD\|184975	PRK15014, PRK15014, 6-phospho-beta-glucosidase BglA; Provisional.	0
NC_020181.1\|WP_015369781.1\|4782150_4785024_+\|aminomethyl-transferring-glycine-dehydrogenase	gnl\|CDD\|235432	PRK05367, PRK05367, aminomethyl-transferring glycine dehydrogenase.	0
NC_020181.1\|WP_015369782.1\|4785084_4785828_+\|SDR-family-oxidoreductase	gnl\|CDD\|182051	PRK09730, PRK09730, SDR family oxidoreductase.	8.9853e-169

>NC_020181.1|WP_015369782.1|4785084_4785828_+|SDR-family-oxidoreductase
MAIALISGASRGIGRATALLLAQEGYTVAVNYHHNIKAATEVVNTIVESGGKATALRADISDEAQVMAMFEAIDRMGEPLMALVNNAGILFTQCTVESLSAERINRVLATNVTGYFLCCREAVKRMSHRHGGKGGAIVNVSSAASRLGAPGEYVDYAASKGAVDTLTTGLALEVAAQGIRVNGVRPGLIYTEMHASGGEPGRVDRVKNSLPMQRGGQPEEVAQTIAWLLSDKASYVTGSFLELAGGK
>NC_020181.1|WP_015369781.1|4782150_4785024_+|aminomethyl-transferring-glycine-dehydrogenase
MTQTLSQLENRDAFIERHIGSDAQQQQEMLKTVGADSLNALIGQIVPQDIQLATPPQVGDATTEFAALAELKAIAGRNKRFKSYIGMGYTAVQLPPVIQRNMLENPGWYTAYTPYQPEVSQGRLESLLNFQQVTLDLTGLDIASASLLDEATAAAEAMAMAKRVSKLKNANRFFVAADVHPQTLDVVRTRAETFGFDVIVDDADKVLDHQDVFGVLLQQVGTTGEIHDYSKLIAELKARKVIVSVAADFMALVLLTAPGKQGADIVFGSAQRFGVPMGYGGPHAAFFAAKDEFKRSMPGRIIGVSKDAAGNTALRMAMQTREQHIRREKANSNICTSQVLLANIASLYAVFHGPAGLKRIAGRIHRLTDILADGLQKKGLKLRHAHYFDTLCVEVADKAAVLARAEALQINLRSDIHGAVGITLDEATTREDVLNLFRAIVGDDHGLDIDTLDKDVALDSRSIPAAMLRDDAILTHPVFNRYHSETEMMRYMHALERKDLALNQAMIPLGSCTMKLNAAAEMIPITWPEFAELHPFCPVEQAEGYHQMIAQLSDWLVKLTGYDAVCMQPNSGAQGEYAGLLAIRHYHESRNEGHRDICLIPSSAHGTNPASAQMAGMQVVVVACDKNGNIDLADLREKAEQAGANLSCIMVTYPSTHGVYEETIREVCEIVHQFGGQVYLDGANMNAQVGITSPGFIGADVSHLNLHKTFCIPHGGGGPGMGPIGVKAHLAPFVPGHSVVQIEGMLTRQGAVSAAPFGSASILPISWMYIRMMGAEGLKQASQNAILNANYIATRLKDAYPVLYTGRDGRVAHECILDIRPLKEETGISELDIAKRLIDFGFHAPTMSFPVAGTLMVEPTESESKVELDRFIDAMLAIRAEIDRVKAGEWPLEDNPLVNAPHTQGELVSEWNHPYSRELAVFPAGLHNKYWPTVKRLDDVYGDRNLFCSCVPMSEYQ
>NC_020181.1|WP_015369780.1|4781630_4782020_+|glycine-cleavage-system-protein-GcvH
MSNVPAELKYSKEHEWLRKEADGTYTVGITEHAQELLGDMVFVDLPEVGATVEAGADCAVAESVKAASDIYAPISGEIVAVNEELNDSPELVNSDPYADGWIFKIKASDEAQVAALLDAAAYEALLEDE
>NC_020181.1|WP_002916480.1|4780511_4781606_+|glycine-cleavage-system-aminomethyltransferase-GcvT
MAQQTPLYEQHTLCGARMVDFHGWMMPLHYGSQIDEHHAVRGDAGMFDVSHMTIVDFHGSRIREFLRYLLANDVAKLTTPGKALYTGMLTASAGVIDDLIVYFLSEDYFRLVVNSATREKDLAWISEQAEPYGLEITVRDDLSLIAVQGPQAKAKAATLFTDAQRQAVEGMKPFFGVQAGDLFIATTGYTGEAGYEIAMPNEQAADFWRGLLDAGVKPCGLGARDTLRLEAGMNLYGQEMDEGVSPLAANMGWTIAWEPADRNFIGREALEMQREKGTEQLVGLVMTEKGVLRGGLPVRFTDSDGNQKEGIITSGTFSPTLGYSIALARVPAGIGDTAVVQIRNREMPVKVTKPGFVRNGKAIV
>NC_020181.1|WP_015369779.1|4778886_4780089_+|FAD-dependent-2-octaprenylphenol-hydroxylase
MQSVDVAIVGGGMVGLAVACGLQGSGLRVAVLEQAAPQPLDADAPPALRVSAINAASEKLLDKLGVWSEIIAQRASCYHGMEVWDKDSFGRISFDDQSMGFSHLGHIIENAVVHHALWQKAQRCADVTLLAPAQLQQVAWGENEAFLSLQDGSMLTARLVVGADGANSWLRNKADIPLTFWDYRHHALVATIRTTEPHQAVARQAFHGEGILAFLPLSDPHLCSIVWSLSPEEAQRMQQADAAAFNQALNIAFDNRLGLCQLESDRQVFPLTGRYARQFAAHRLALVGDAAHTIHPLAGQGVNLGFMDAAELIDELKRLHAQGKDIGQHLYLRRYERSRKHSAALMLAGMQGFREMFSGSHPAKKLLRDMGLKLADSLPGVKPQLIRQAMGLNDLPAWLR
>NC_020181.1|WP_015369778.1|4777697_4778876_+|2-octaprenyl-6-methoxyphenyl-hydroxylase
MSVLIVGGGMTGATLALAISRMTGGALPVHLIEAQDPASSRHPGFDDRAIALAAGTCQQLARIGIWQNLAKRATPIQRVHVSDRGHAGFVNLAAADYGLSALGQVVELHDVGQRLFSLLREAPGVTLHCPAKVEAVNRSQDSVSLTLDSGETINGKLLVAADGSRSSLGARCGISWQQQPYEQLAIIANVSTALPHEGRAFERFTEHGPLAMLPMSQGRCSLVWCHPQSRRDEVLSWSDERFCQQLQQAFGWRLGRITHAGKRSVYPLALTTAIRSVSHRLALVGNAAQTLHPIAGQGFNLGLRDVMSLAELLADAHGLGEDVGNYSLLCRYQARRADDKAATIGVTDGLVHLFANRWAPLVAGRNVGLMAMELFTPARDALAQRTLGWVPR
>NC_020181.1|WP_015369777.1|4776384_4777701_+|Xaa-Pro-aminopeptidase
MTQQEFLSRRQALLAQMQPGSAALIFAAPEAVRSADSEYPYRQNSDFWYFTGFNEPEALLVLIKSDETHNHSVLFNRVRDLTAEIWFGRRLGQDAAPGKLGVDRALAFSEINQQLYQLLNGLDAIYFAQGEYAYADEIVFNALEKLRKGSRQNLQAPNSVIDWRPVVHEMRLFKSAEELEVMRRAGEISALAHTRAMEKCRPGMFEYQLEGEILHEFNRHGARFPSYNTIVGGGENACILHYTENESELRDGDLVLIDAGCEYRGYAGDITRTFPVNGKFTKPQREIYDIVLESLETALELYRPGTSIYEVNQEVVRIMITGLVRLGILKGEIDELIANNAHRPYFMHGLSHWLGLDVHDVGNYDTDRSRVLEPGMVLTVEPGLYIATDADVPAQYRGIGIRIEDDIVIIEDGNENLTASVVKKADEIEALMAAARQS
>NC_020181.1|WP_015703432.1|4775780_4776359_+|YecA-family-protein
MSIQNEMPGYNDVDQLLNQQGVGLTPAEMHGLISGILCGGNTDSSWQPLVHDLTNEGLAFGHELAQALRSMHSATSDSLEDDGFLFQLYMPEGDNVSVFDRADALAGWVNHFLLGLGVTQPKLDKVKDETGEAIDDLRNIAQLGYDEDEDQEELEMSLEEIIEYVRVAALLCHDTFARQQPTAPEVRKPTLH
>NC_020181.1|WP_004205298.1|4775284_4775614_-|cell-division-protein-ZapA
MSAQPVDLQIFGRSLRVNCPPEQRDALNQAAEDLNQRLQDLKERTRVTNTEQLVFIAALNISYELTQEKAKTRDYASSMEQRIRMLQQTIEQALLEQGRISERPGSKFE
>NC_020181.1|WP_015369775.1|4774363_4774960_-|5-formyltetrahydrofolate-cyclo-ligase
MTIQPDIPLSRQQIRQQIRERRRALSAEQQQRFALQAAERMMAYPPVVLAHTVALYLSFDGELDTQPLIEQLWRAGKRVYLPVLHPFSPGNLLFLHYHPQSQLIFNRLKIYEPKLDVRDVLPLAELDVLITPLVAFDASGQRLGMGGGFYDRTLQNWRQYRLQPVGYAHDCQQVDTLPSEQWDIPLPAVITPGKTWRW
>NC_020181.1|WP_015369783.1|4786023_4786527_-|protein-disulfide-oxidoreductase
MASKIRRWLRELAVWLLIGAAVSLAVDYFRQPALPQNFSATSLQTLDGRTLDLNAMSQQKPLLLYVWATWCGVCRYTTPSVASLAADGGNVLTVALRSGDNATLEKWLTRKKMALPTVNDPSGQLARQWDIQVTPTLVVISQGEVKSVTTGWTSNWGMRLRLWLASW
>NC_020181.1|WP_015369784.1|4786516_4787128_-|thioredoxin-domain-containing-protein
MRAITALLLLCVSAFSFAAPAEEPQSNGNDQLAQLLFNDPNSPRTGAKEPTLTIVSFTDYNCPYCKQFDPMLEKIVHDNPDIQLIVKLLPFKGQSSVNAAKAALSTWRQQPDKFWALHQRLMAKKGYHDDASIAAAQKKTATDSVNIDDKTMDSLKMNLILSQVLNIQGTPATIIGDQMVAGAIPADELEGLVKEQLAKARGQ
>NC_020181.1|WP_015369785.1|4787129_4789139_-|thioredoxin-family-protein
MFMVFRRLLVCLLWLWLPVSQAADSGWLRAADNQHASVRLRAQSESNGDTRLLLDVALEKGWKTYWRSPGEGGIAPAIAWHTPLEVNWRWPTPQRFDVAGISTQGYHGDVSFPMTLRGKIPPTLSGVLTLSTCSNVCILTDYPFSLDMTAPAGEQFNYDFTRAMGTLPLRDGLTSALSASYVSGKLTVTARRDAGWQQPALFIDSMEDVDFGKPSFTSHGDTLTATVPVTDSWGEAAPDLSGKTLSLVLADNGQAQESHIAITAGSAAPGLALGWVLLMALAGGLILNVMPCVLPVLAMKLGSLVQTERRERGAVRRQFLASVCGIVVSFLALALMMTALRLGNQALGWGIQFQNPWFIGAMALVMVLFSASLLGLFEIRLSSNASTFLATRGGNGLMGHFWQGAFATLLATPCTAPFLGTAVSVALVAPLPLLWGIFFAMGIGMSLPWLLIVAWPGLAQRLPRPGRWMNHLRVVLGLMMLGSALWLVSLLTIHIGRTPVLTLLVILAIFLLLATAWRYRWRTALRAGALAIVVAGAVAFVAQQDGQGPRRDRVNWQPLSEQAIANALAEHKRVFIDVTADWCVTCKANKYNVLLRDDVQQALSAPDVIALRGDWSRPSADISQFLTARGSAAVPFNQIYGPGLPQGQILPALLDREQLLATLSAAKGK
>NC_020181.1|WP_015369786.1|4789188_4789548_-|copper-resistance-protein
MIKRQRKAILLVLLACLVVLICTAQRMAGMHALVMNVTAASQSAQPGPDNAEAPVSPCELSAKSLMAVPPMLFEGALLAIALLLAVLAAIPPRIERIWPPRVISPPRLRVHLRLCVFRE
>NC_020181.1|WP_015369787.1|4789672_4791106_-|6-phospho-beta-glucosidase-BglA
MKKLTLPKDFLWGGAVAAHQVEGGWNKGGKGPSICDVLTGGAHGVPREITQQVEAGKYYPNHEAVDFYGHYKEDIKLFAEMGFKCFRTSIAWTRIFPQGDETQPNEEGLKFYDDMFDELLKYNIEPVITLSHFEMPLHLVQQYGGWTNRKVVDFFVRFAEVVFERYKHKVKYWMTFNEINNQRNWRAPLFGYCCSGVVYTEHENPEETMYQVLHHQFVASALAVKAAQRINPEMQVGCMLAMVALYPYSCKPEDVMFAQESMRERYVFTDVQLRGYYPSYVLNEWERRGFNIKMEDGDAQILREGTCAYLGFSYYMTNAVKAEGGTGDAISGFEGSVPNPHVKASDWGWQIDPVGLRYALCELYERYQKPLFIVENGFGAYDKVEADGSINDDYRIDYLRAHVEEMIKAVTYDGVDLMGYTPWGCIDCVSFTTGQYSKRYGFIYVNKHDDGTGDMSRSRKKSFNWYKEVIASNGENL
>NC_020181.1|WP_015369788.1|4791225_4791954_-|MurR/RpiR-family-transcriptional-regulator
MFSHAAVASLNNLEMMVYHYVIKNRDKVMYMTIRELAEAAGVSTTTVLRFCRKLQCEGYSEFRVRFKLYLEQNEPQQANIGASEIMSFFKSVNNDEFDQLLEQAVDIILSSERIIFVGAGTSGALAKYGARFFSNVGKFSNHIDDPYFPVTNDMARNALAIVLSVSGETEEILRFASQFSLHHCRVMSITSHEHSRLAKLADFNLSWHVPQTRIGGVYDITTQIPVIYILESLGRKLARKIG
>NC_020181.1|WP_015369789.1|4792004_4792316_+|ASCH-domain-containing-protein
MQANDITFFQRFQDDILAGRKTITIRDAAESHFKPGDVLRVGRYEDDGYFCTIAVTATSTVTLDTLTEQHAQQENMTLEQLRQVISEIYPAEDRFYVIEFKRL
>NC_020181.1|WP_008806429.1|4792480_4793140_+|hemolysin-III-family-protein
MVRKPLITQGYSLAEEVANSISHGIGLVFGIVGLVLLLVQAVDTNASATAITSYSLYGGSMIMLFLASTLYHAIPHQRAKQWLKKFDHCAIYLLIAGTYTPFLLVGLNSPLAKGLMIVIWSLALLGILFKLTIAHRFKILSLVTYLTMGWLSLIVVYQLAVKLAVGGVTLLAVGGVVYSLGVIFYVCKRIPYNHAIWHGFVLGGSVCHFLAIYLYVGQS
>NC_020181.1|WP_015369790.1|4793238_4794222_-|tRNA-modifying-protein-YgfZ
MAFTPFPPRQPSSSARLPLTLMTLDDWALATITGPDGEKYLQGQITADVSHLTADQHLLAAHCDAKGKMWSNLRVFHRDGGFAWIERRSLREAQLTELKKYAVFSKVTIAANDDLVLLGVAGFQARAALAPLFAALPDAGKPVVTEGVTSLLWFEHPAERFLLVTDADTANRVTDALRGEAQLNNSQQWLALNIEAGLPVIDSVNSAQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWTLAGTASRVPEAGEDLELKMGDNWRRTGTVLAAVQLDDGSLMVQVVMNNDMEPDSVFRVRDDAGSLSIKPLPYSLEED
>NC_020181.1|WP_015369791.1|4794445_4794712_+|FAD-assembly-factor-SdhE
MDINNKARIHWACRRGMRELDISIMPFFEYEYDTLSDDDKRLFIRLLENDDPDLFNWLMNHGKPADAQLQRMINLIQTRNRERGPVAI

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Crispr_ID: NC_020181_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_020181_4

4811278-4811408

Orphan

Consensus_repeat	Method
ATATACGGGAAAAACCCGTATGTT	CRISPRCasFinder

2 spacers

The CRISPR arrays of NC_020181_4

>merge|NC_020181|4|4811278-4811408|CRISPRCasFinder
ATATACGGGAAAAACCCGTATGTTCAGATGTTGGTTAACTGGATATACAGGAAAAACCCGTATGTCTGCATGATGATATACAGGAAAAACCCGTATGTTTCGGCATGATATACGGGAAAAACCTGTACTAT

>NC_020181|4|4|4811278-4811408|CRISPRCasFinder
ATATACGGGAAAAACCCGTATGTT	CAGATGTTGGTTAACTGG
ATATACAGGAAAAACCCGTATGTC	TGCATGATGATATACAGGAAAAACCCGTATGTTTCGGCATG
ATATACGGGAAAAACCTGTACTAT

Protein	Signature genes	Signature genes Name	Protein_function
NC_020181.1\|WP_015369817.1\|4817380_4819246_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|234750
NC_020181.1\|WP_032710479.1\|4817187_4817388_+\|hypothetical-protein	unknown	unknown	unknown
NC_020181.1\|WP_015369805.1\|4809303_4809750_+\|hypothetical-protein	unknown	unknown	unknown
NC_020181.1\|WP_032710480.1\|4807963_4808689_+\|HNH-endonuclease	unknown	unknown	gnl\|CDD\|366837
NC_020181.1\|WP_004144724.1\|4802529_4803246_-\|DUF554-domain-containing-protein	unknown	unknown	gnl\|CDD\|377371
NC_020181.1\|WP_015369803.1\|4806555_4807275_+\|peptidoglycan-DD-metalloendopeptidase-family-protein	unknown	unknown	gnl\|CDD\|236782
NC_020181.1\|WP_015369801.1\|4803848_4805342_-\|UbiD-family-decarboxylase	unknown	unknown	gnl\|CDD\|376697
NC_020181.1\|WP_015369806.1\|4809794_4810412_-\|tyrosine-type-recombinase/integrase	unknown	unknown	gnl\|CDD\|271192
NC_020181.1\|WP_015369812.1\|4814427_4814745_+\|hypothetical-protein	unknown	unknown	unknown
NC_020181.1\|WP_015369808.1\|4812693_4813524_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236768
NC_020181.1\|WP_015369813.1\|4815412_4815634_+\|hypothetical-protein	unknown	unknown	unknown
NC_020181.1\|WP_015369811.1\|4814209_4814431_+\|hypothetical-protein	unknown	unknown	unknown
NC_020181.1\|WP_015369815.1\|4816020_4817055_+\|major-capsid-protein	unknown	unknown	gnl\|CDD\|377147
NC_020181.1\|WP_015369804.1\|4808814_4809243_+\|hypothetical-protein	unknown	unknown	unknown
NC_020181.1\|WP_015369802.1\|4805553_4806468_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223656
NC_020181.1\|WP_015369799.1\|4801921_4802476_-\|isopentenyl-diphosphate-Delta-isomerase	unknown	unknown	gnl\|CDD\|235156
NC_020181.1\|WP_015369814.1\|4815630_4815999_+\|hypothetical-protein	unknown	unknown	unknown
NC_020181.1\|WP_080473210.1\|4813970_4814210_+\|hypothetical-protein	unknown	unknown	unknown
NC_020181.1\|WP_015369807.1\|4812502_4812679_+\|hypothetical-protein	unknown	unknown	unknown
NC_020181.1\|WP_015369800.1\|4803258_4803837_-\|UbiX-family-flavin-prenyltransferase	unknown	unknown	gnl\|CDD\|223241

Protein	Function_ID	Function_description	E-value
NC_020181.1\|WP_015369808.1\|4812693_4813524_+\|hypothetical-protein	gnl\|CDD\|236768	PRK10819, PRK10819, transport protein TonB; Provisional.	0.000184752
NC_020181.1\|WP_015369799.1\|4801921_4802476_-\|isopentenyl-diphosphate-Delta-isomerase	gnl\|CDD\|235156	PRK03759, PRK03759, isopentenyl-diphosphate Delta-isomerase.	9.78089e-108
NC_020181.1\|WP_015369817.1\|4817380_4819246_+\|hypothetical-protein	gnl\|CDD\|234750	PRK00409, PRK00409, recombination and DNA strand exchange inhibitor protein; Reviewed.	0.00889335
NC_020181.1\|WP_015369815.1\|4816020_4817055_+\|major-capsid-protein	gnl\|CDD\|377147	pfam03864, Phage_cap_E, Phage major capsid protein E. Major capsid protein E is involved with the stabilisation of the condensed form of the DNA molecule in phage heads.	1.2991e-08
NC_020181.1\|WP_032710480.1\|4807963_4808689_+\|HNH-endonuclease	gnl\|CDD\|366837	pfam01844, HNH, HNH endonuclease. His-Asn-His (HNH) proteins are a very common family of small nucleic acid-binding proteins that are generally associated with endonuclease activity.	2.36661e-10
NC_020181.1\|WP_015369801.1\|4803848_4805342_-\|UbiD-family-decarboxylase	gnl\|CDD\|376697	pfam01977, UbiD, 3-octaprenyl-4-hydroxybenzoate carboxy-lyase. This family has been characterized as 3-octaprenyl-4- hydroxybenzoate carboxy-lyase enzymes. This enzyme catalyzes the third reaction in ubiquinone biosynthesis. For optimal activity the carboxy-lase was shown to require Mn2+.	9.45664e-142
NC_020181.1\|WP_015369803.1\|4806555_4807275_+\|peptidoglycan-DD-metalloendopeptidase-family-protein	gnl\|CDD\|236782	PRK10871, nlpD, murein hydrolase activator NlpD.	3.56856e-77
NC_020181.1\|WP_015369802.1\|4805553_4806468_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|223656	COG0583, LysR, Transcriptional regulator [Transcription].	9.92068e-36
NC_020181.1\|WP_015369806.1\|4809794_4810412_-\|tyrosine-type-recombinase/integrase	gnl\|CDD\|271192	cd01192, INT_C_like_3, Uncharacterized site-specific tyrosine recombinase, C-terminal catalytic domain. Tyrosine recombinase (integrase) belongs to a DNA breaking-rejoining enzyme superfamily. The catalytic domain contains six conserved active site residues. The recombination reaction involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA. Many DNA breaking-rejoining enzymes also have N-terminal domains, which show little sequence or structure similarity.	1.30382e-19
NC_020181.1\|WP_004144724.1\|4802529_4803246_-\|DUF554-domain-containing-protein	gnl\|CDD\|377371	pfam04474, DUF554, Protein of unknown function (DUF554). Family of uncharacterized prokaryotic proteins. Multiple predicted transmembrane regions suggest that the region is membrane associated.	5.44348e-75
NC_020181.1\|WP_015369800.1\|4803258_4803837_-\|UbiX-family-flavin-prenyltransferase	gnl\|CDD\|223241	COG0163, UbiX family flavin prenyltransferase [Coenzyme transport and metabolism].	3.25619e-99

>NC_020181.1|WP_015369806.1|4809794_4810412_-|tyrosine-type-recombinase/integrase
MAISKGAKRTDGLESADQVKLVVEEIAKKSQTVADLFLLGVETQLRGVDMRSWRWVELDIGSKVLRITQDKTKEAVEVELTETAREVLKARYNERGENVYVFQNDSNRSKGKPISRSKIHAEIQYAVDKLKMRGLLPQDAVISMHSSRKTIASIAHAQGEDLEVISKMLGHRSTEHTRAYLGITQAKVDALRTKYSTGIKRVTLR
>NC_020181.1|WP_015369805.1|4809303_4809750_+|hypothetical-protein
MEVKKVSVEDYRADMGLMRGYSFDSQEIQDVKSFYYQEAVKQLSNLNCGIEIIREDENKNVLVFKVNEDLKFQLTLLNNIKYLSVDLHAYEKNNRYEDVLSEQYHYHCKGDSDYEFSDVEEHLEYDRVGQHFRHMLVCLVKEIAKIED
>NC_020181.1|WP_015369804.1|4808814_4809243_+|hypothetical-protein
MADPASIAAISGTLELVNKSVDLVRNLRKKGDDELNAAEMRNTLIDLLDDLVEVKSEFVSLKAVLLSKEEEIQSLKAQLDGKNKLQFDGKLYWLEGDKTPYCTKCYEKDSLVFHLSFIHANRNWNSSEHWHCRNCQANYYLR
>NC_020181.1|WP_032710480.1|4807963_4808689_+|HNH-endonuclease
MSSKSNRTYKYGDQPIRITTVQVVAEQFGGAATAKQVDAYLKERFPHYKDDTHLNLIVNSVNCNRSYWSFNKTARRTDDVTHRHHEYDRLFKRGKTFEIYQPSIHGIWELYQDQQGKWCYRKVKSEFEKAVDGASELPPSERKKILDAENNTPELIEVTTRVYKRSPYVVAEVLSRANGKCQSCMSDAPFLKVDGTPFLEVHHIEWLSNGGEDSVENAIALCPNCHRQAHFGVLELAPVNK
>NC_020181.1|WP_015369803.1|4806555_4807275_+|peptidoglycan-DD-metalloendopeptidase-family-protein
MKTRFYIAIMLLASLTLAGCSSTSDSGSTYTVKRGDTLYAISRSTGTSVRDLARLNNISPPYTIEVGQKLKLNGGSKAKSSTAGKKSSSTRTAAVTPSSAVPQSSWPPVGQRCWRWPTSGKVVMPYSTRDGGNKGIDIAGTRGQPVYAAGAGKVVYVGNQLRGYGNLIMIKHNEDYITAYAHNDKMMVNNGQSVKIGQQIATMGSTDADSVRLHFQIRYRATAIDPLRYLPPQGSKPKC
>NC_020181.1|WP_015369802.1|4805553_4806468_+|LysR-family-transcriptional-regulator
MDLKRLRYFCRVVEHGSVSQAAKSLNMAQPPLSKRIQELEEELQVSLFERRGNRIEPTEAGYFLYRKGCEILRQVEDTARETADIAQKTRAEVRVGLTHLYQNYFQPLLMELYRRNPETAINISVTDSSHLETLLNEGAIDLALIQRPYRSEGFDYVSFDPIKLVAVINKKCLPQPPSNPFDYNALATMPLVLLHRAKDSGTYEMLMDLFRKSGVSAKVIMHITQPGVILDWLEGGLEAATLLPSSEVNAEKLPHCYVVDVFPSPQIFYPALVKLPSMSYLPALMDIIAGGYPFNAPKGVEVVE
>NC_020181.1|WP_015369801.1|4803848_4805342_-|UbiD-family-decarboxylase
MAHSDKKAPSSVHDLRSALALLKTLPGEYVETDTEVDPHAELSGVYRYVGAGGTCQRPTRKNGPVMVFNNIKGFNDISVAIGLNGSRQRVSQFLQCEPAKLGHLLKDSVENAIAPTMVQGAAVCQEVVHLASDDDFDLRKLLPAPTNTEEDAGPYITMGLCYASDPQTGESDITIHRLCVQSRDELSMWLTPGRHIDAFRMKAEAAGQPLPISISIGVDPAIEIAACFEPPTTPLGFDELSIAGALRGHPVEMVQCKTINEKAIAHAEIVIEGELLPNVRVREDQNTNTGRAMPEFPGYTGEAKEAIPVIKVKAVTHRINPIWRTTVGPGEEHVNMAGIPTEASILDMVERAMPGKLLNVFAHSAGGGKLLAVLQFKKSSPADEGRQRQAALLAFSAFPELKHVILVDEDVDIFDSDDVLWAMQTRYQGDVDTVVIPGVRCHPLDPSQVPEYSPSILQQGMSCKTIFDCTVPFHLKHNFERSKFKAVDVKRFLPDFE
>NC_020181.1|WP_015369800.1|4803258_4803837_-|UbiX-family-flavin-prenyltransferase
MTPRIIIGISGASGFQYGVKALELLQPLAVEVHLVVSKGAEKTCELETDYRLDEVMALADVVHPINHLGASISSGSFKTLGMLVAPCSMRSLGAIAHCLTDNLLTRAADVVLKERRRLVLLARETPLNLGHIRNMAAVTEMGGIIFPPVPALYQRPQSADDIITHSVNRALDLFDLEVNNIPRWGEGALHYA
>NC_020181.1|WP_004144724.1|4802529_4803246_-|DUF554-domain-containing-protein
MLIGPYVNGSAVIIGGLIGAMAGGKLPERVKTALPMTFGLCSVGLGITLVLKVKYMPAVVLAMVLGAFLGELLHLEKRIGSAAGSTRGLINKVLPPVQGLGHEEFTEKFVAILVLFCASGTGIFGAMTEGMSGDPSILYIKTILDLFTAGIFATLLGYAVMTIAIPQIVIQVALAMLAVFILPMITPSMMADFSCAGGLLMVATGLRICNIKLFPVANMLPGLVLVMPFSHLWATLVA
>NC_020181.1|WP_015369799.1|4801921_4802476_-|isopentenyl-diphosphate-Delta-isomerase
MAGEHVILLDEQDKPTGMLEKYAAHTLDTPLHLAFSCWLFNEQGQFLVTRRSLSKKAWPGVWTNSVCGHPQQGETFEQAVTRRCHFELGVEIADIAPVHPAFRYRAVAPNGIVENEVCPVFAARVVSELQPNDDEVMDYQWVELPEMLSALAATPWAFSPWMVLEAKNKNARQALIDFVARLRA
>NC_020181.1|WP_015369807.1|4812502_4812679_+|hypothetical-protein
MSETQKKKPAGTFVKLPDEVFTTLFKEARARGLTVQEMLIDAATKLSTSIQSGERSIK
>NC_020181.1|WP_015369808.1|4812693_4813524_+|hypothetical-protein
MTDIINSKVFSFTNTEDAFNECTRITNLKTGVTVSLSPTNKQLFVRIRHRFHNFVKKRGGKYYDNIDQLGESVGVKYDAASDGIKKLKAVGLISGTIKGRSYQWESVADLTPEDFLFERDINAMKRKTAPEWVDCLKHPVFGNAKEDVAPEVQEEKQQSVPEADPMCEFDDTPEEEEPAPEKVEPAPKPKPTKKPAARKAPDKQQTVSPFEFKTPRDETKDWWYLERCNDADQFTGLTDFDLPYLAMFERQGKLTNQHSIQHLKMKRELYARQQQT
>NC_020181.1|WP_080473210.1|4813970_4814210_+|hypothetical-protein
MPTGSEFELLQDVLSSTDNVYYKPRRRREYQVDSSNLQHWQVLGFQHYADYVGYSQTNGLSGHTADFDFIFHDEKEIHD
>NC_020181.1|WP_015369811.1|4814209_4814431_+|hypothetical-protein
MHVQTTQTKRFAQHVKCCQWYYEEIDLITNDAYLTDEEKLAALDELEDKILTLAAPFLAVATTIKAYKERMTQ
>NC_020181.1|WP_015369812.1|4814427_4814745_+|hypothetical-protein
MTKTNIDTLLQDFHDQLHIPLLDACIKASREGTPENLTAALKLLHLASVAMQGIIAVVESTESLSDDQDVLGEVSRMAQSLVTCMQDLDALAHDIAEEYAVLETE
>NC_020181.1|WP_015369813.1|4815412_4815634_+|hypothetical-protein
MFLINNKSRVLKYKNDVLTINPQIIEQVAQYAGCEVSDVIKAMETYFPDESPEQKPTIDDLIARKVKGLNQTK
>NC_020181.1|WP_015369814.1|4815630_4815999_+|hypothetical-protein
MIIDLDTLFPQRLSLTDLVSYSTDHFASIESKIFASLPADVECGDVIGADGSLYTSGADAFVVVSEFVTAGSNKAVNVLRSPARGSLVCIKSDNLTAADGAHDAAVAALAAQGFQMREFFTS
>NC_020181.1|WP_015369815.1|4816020_4817055_+|major-capsid-protein
MAILGQNYVDLSPLFNLNPTRNYLLASLGLFDGVGVSSHKVAVSRLVEDNRSLFNEPTARFSSEHNVTARQNGKEWLIELPYFLREDQITPADIQGKRKPGTDTQETLTDLFTDYTHKHSVAFMRTRESYLARSLFSGTVNTPKTDDVLIDFGDLFGVAPMNTTLDLSATDSSTLRAIDDMVSQITETAQGMAAQVERIIVFAKGGFYSDLRFSPAMEAAFRYVSPLDESNVVYQRRDLLPGVSTFSIPGSNVDVIKVTDPLLLAQMGDADAIAIPQFAAGLNVYQNIYGAPSSNFELLDATPAETYSWSYESERGDVVNCINEHSSLPVNNGLGFSVHIKASE
>NC_020181.1|WP_032710479.1|4817187_4817388_+|hypothetical-protein
MEMILKSSRGLHVRVSADDAEGLLKVSQLCELLEISYTGVRARIFRGETVEQAIHHFLDQKGGGDA
>NC_020181.1|WP_015369817.1|4817380_4819246_+|hypothetical-protein
MLEINTSKIVNTVTFTVDKSSIAEAKKAADDLQRHFKKLENPKIRFQAQKQRRQSAREKVADAKAASPKTSNDLKQQRQAEKAGKAQAREAAKIAKRNETADIKFKSAGLQLRGIKGKYGLDPAKQYEALKFIQQETEAFKKGLITSQRMNFTIRERITDLRREAALQARITASTQQQAAALKHVKRTDYKGAAAGIKEKGLNVIGGGAPLLGATAALAGGAGVLSRIRDKGNENLELVRMSERTKLNPNAVKAIVAWGQQHGVDSASVDKITDGFGKDTREKISETLMNSQFDQKSGKWKGGNSNIEEILNKFGWGKGAIAKYEDNPLDFLQSTVNEGQRRGYSDGEIAHLLENIFDDGAHYVDLFKNNGEQFISTLKKLVDSGQTLNDEQIKQTYAFGDLSVAMSSLMNGVDNSMFTGFMKGFADGGDELVKNTQVITEAAGSLGEGLGNLSKEITGFVGEISGVVSDLNAGLRSRFPDWFSDANKPAAQALYDGAVGDSANATADWIKSKTGVDTREFGPAIMDWLGVGGGNVGTAASQYSLSGDYLRDSAMSFGGGAPAYTLNPTFNLTVAPEVPLTIQTDTSNLADYVDFTAKASQASFAQSLTLSALSGQSSTGG

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

188310 : 228814

Burkholderia_virus(38.1%)

plate,tail,integrase,terminase,capsid,transposase

attL 169405:169422|attR 234628:234645

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
169405:169422	attL	NA	NA	NA	NA
WP_032706092.1\|188310_189519_-	SulP family inorganic anion transporter	A0A2H4J153	uncultured_Caudovirales_phage	5.2e-70	45.7
WP_015365635.1\|189796_191431_+	malate dehydrogenase (quinone)	NA	NA	NA	NA
WP_000904922.1\|191735_192308_-	recombinase family protein	A0A0A7NPV4	Enterobacteria_phage	4.6e-85	85.2
WP_024187567.1\|192379_192883_+\|tail	tail fiber protein	Q9MCR6	Enterobacteria_phage	2.7e-36	51.2
WP_172903745.1\|192911_193367_+\|tail	tail fiber protein	A0A0F7LCR3	Escherichia_phage	1.5e-30	49.4
WP_000072166.1\|193373_193988_-\|tail	tail fiber assembly protein	Q9MCR5	Enterobacteria_phage	1.7e-61	61.5
WP_015365639.1\|194510_196133_-\|tail	tail fiber protein	A0A0K2FIZ6	Escherichia_phage	4.9e-39	45.5
WP_000138756.1\|196135_196714_-\|tail	phage tail protein I	A4JWL7	Burkholderia_virus	1.7e-66	66.8
WP_001529034.1\|196706_197810_-\|plate	baseplate J/gp47 family protein	Q6QI99	Burkholderia_phage	1.4e-106	55.0
WP_000859116.1\|197800_198148_-	GPW/gp25 family protein	Q6QIA0	Burkholderia_phage	1.7e-34	61.5
WP_000148265.1\|198202_198799_-\|plate	phage baseplate assembly protein V	A4JWL4	Burkholderia_virus	5.4e-36	45.2
WP_015365640.1\|198795_199950_-	phage late control D family protein	Q6QIA2	Burkholderia_phage	5.5e-85	47.3
WP_000478224.1\|199937_200150_-\|tail	tail protein X	Q6QIA3	Burkholderia_phage	1.2e-17	57.1
WP_000458386.1\|200149_201034_-\|tail	phage tail protein	A4JWL1	Burkholderia_virus	6.8e-51	47.9
WP_015365641.1\|201033_203985_-\|tail	phage tail tape measure protein	A4JWL0	Burkholderia_virus	5.4e-84	29.6
WP_085959828.1\|204060_204219_-\|tail	GpE family phage tail protein	NA	NA	NA	NA
WP_015365642.1\|204142_204478_-\|tail	phage tail assembly protein	NA	NA	NA	NA
WP_041165544.1\|204575_204857_-	hypothetical protein	NA	NA	NA	NA
WP_162832341.1\|204859_205384_-\|tail	phage major tail tube protein	A4JWK6	Burkholderia_virus	1.1e-67	66.7
WP_015365644.1\|205380_206808_-\|tail	phage tail sheath subtilisin-like domain-containing protein	A4JWK5	Burkholderia_virus	1.2e-214	76.5
WP_000666499.1\|206797_207049_-	hypothetical protein	NA	NA	NA	NA
WP_001101804.1\|207048_207513_-	hypothetical protein	Q6QIB2	Burkholderia_phage	9.1e-39	51.7
WP_015365645.1\|207512_207959_-	DUF1320 domain-containing protein	A4JWK2	Burkholderia_virus	2.2e-34	52.3
WP_000537457.1\|207960_208299_-	DUF2190 family protein	NA	NA	NA	NA
WP_015365646.1\|208308_209262_-	hypothetical protein	A4JWK0	Burkholderia_virus	6.8e-65	44.5
WP_015365647.1\|209276_210392_-	hypothetical protein	A4JWJ9	Burkholderia_virus	1.6e-97	51.6
WP_000135514.1\|210606_211065_-	phage virion morphogenesis protein	Q6QIB8	Burkholderia_phage	2.6e-30	44.8
WP_000117556.1\|211067_211889_-\|capsid	minor capsid protein	A4JWJ6	Burkholderia_virus	3.1e-98	61.5
WP_015365649.1\|211869_213366_-	DUF935 domain-containing protein	A4JWJ5	Burkholderia_virus	2.7e-169	60.0
WP_000122980.1\|213365_214682_-\|terminase	terminase	A0A2P9JZI8	Alteromonadaceae_phage	1.3e-146	63.5
WP_000533685.1\|214678_215227_-	DUF3486 family protein	A4JWJ3	Burkholderia_virus	1.3e-36	47.3
WP_000227702.1\|215229_215541_-	hypothetical protein	A0A0S4L0A3	Pseudomonas_phage	3.0e-30	60.6
WP_015365650.1\|215540_215867_-	hypothetical protein	Q6QIC4	Burkholderia_phage	2.6e-16	45.8
WP_015365651.1\|215863_216514_-	lipoprotein	Q5ZQY9	Pseudomonas_phage	1.2e-09	33.2
WP_015365652.1\|216497_217238_-	transglycosylase SLT domain-containing protein	Q5ZQZ1	Pseudomonas_phage	9.4e-62	50.6
WP_015365653.1\|217240_217591_-	phage protein	A4JWP3	Burkholderia_virus	5.8e-22	52.2
WP_041165545.1\|217721_218150_+	hypothetical protein	NA	NA	NA	NA
WP_015365654.1\|218238_218787_-	hypothetical protein	Q6QID0	Burkholderia_phage	1.3e-52	61.4
WP_015365655.1\|219217_219982_+	DNA adenine methylase	A2I2Y7	Vibrio_virus	1.4e-97	63.5
WP_032146109.1\|220102_220441_-	helix-turn-helix domain-containing protein	F6MII3	Haemophilus_phage	4.8e-05	34.4
WP_000123378.1\|220541_220730_+	DNA-binding protein	Q5ZQZ9	Pseudomonas_phage	3.9e-17	71.0
WP_015365656.1\|220782_221091_+	helix-turn-helix domain-containing protein	Q5ZR02	Pseudomonas_phage	4.6e-23	55.9
WP_015365657.1\|221101_222013_+	DUF3102 domain-containing protein	A4JWN3	Burkholderia_virus	1.8e-75	55.7
WP_015365658.1\|222016_223786_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	Q6QIE0	Burkholderia_phage	5.6e-230	68.7
WP_015365659.1\|223796_224963_+	AAA family ATPase	A4JWN1	Burkholderia_virus	9.7e-122	59.7
WP_000843445.1\|224965_225235_+	hypothetical protein	NA	NA	NA	NA
WP_001140138.1\|225262_225793_+	host-nuclease inhibitor Gam family protein	L7P7T1	Pseudomonas_phage	3.1e-59	67.3
WP_000632576.1\|226081_226354_+	hypothetical protein	NA	NA	NA	NA
WP_000197788.1\|226363_226660_+	hypothetical protein	NA	NA	NA	NA
WP_000763554.1\|226674_226890_+	hypothetical protein	NA	NA	NA	NA
WP_000132035.1\|226886_227570_+	DUF2786 domain-containing protein	L7P7W8	Pseudomonas_phage	2.9e-25	36.7
WP_015365661.1\|227566_227797_+	hypothetical protein	NA	NA	NA	NA
WP_000206212.1\|227786_227993_+	hypothetical protein	NA	NA	NA	NA
WP_015365662.1\|227994_228444_+	regulatory protein GemA	A4JWM5	Burkholderia_virus	5.2e-23	43.6
WP_001281696.1\|228415_228814_+	DNA-binding protein	Q6QIE8	Burkholderia_phage	3.9e-30	55.9
234628:234645	attR	NA	NA	NA	NA

DBSCAN-SWA_2

608292 : 642429

uncultured_Caudovirales_phage(36.67%)

tail,head,integrase,terminase,holin

attL 600097:600112|attR 618385:618400

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
600097:600112	attL	NA	NA	NA	NA
WP_015365913.1\|608292_609309_-\|integrase	tyrosine-type recombinase/integrase	H9C152	Pectobacterium_phage	3.7e-125	64.2
WP_015365914.1\|609292_609538_-	DUF4224 domain-containing protein	H9C153	Pectobacterium_phage	2.8e-07	41.4
WP_015365915.1\|609747_609933_-	hypothetical protein	NA	NA	NA	NA
WP_015365916.1\|609934_610495_-	siphovirus Gp157 family protein	H9C156	Pectobacterium_phage	1.2e-48	58.4
WP_015365917.1\|610494_612651_-	hypothetical protein	H9C157	Pectobacterium_phage	2.4e-97	34.2
WP_041165546.1\|612695_613019_-	hypothetical protein	NA	NA	NA	NA
WP_041165547.1\|613508_613895_-	helix-turn-helix domain-containing protein	A5VW98	Enterobacteria_phage	1.5e-15	59.4
WP_041165548.1\|613975_614170_+	hypothetical protein	NA	NA	NA	NA
WP_015365920.1\|614232_614679_+	hypothetical protein	H9C162	Pectobacterium_phage	1.7e-26	51.4
WP_015365921.1\|614762_614921_+	hypothetical protein	NA	NA	NA	NA
WP_015365922.1\|614923_616294_+	hypothetical protein	A0A067ZIA1	Vibrio_phage	3.6e-27	52.3
WP_015365923.1\|616290_617679_+	AAA family ATPase	Q8HA30	Enterobacteria_phage	2.0e-105	47.1
WP_015365924.1\|617717_618386_+	hypothetical protein	NA	NA	NA	NA
WP_015365925.1\|618390_618624_+	hypothetical protein	NA	NA	NA	NA
618385:618400	attR	NA	NA	NA	NA
WP_015365926.1\|618620_618773_+	hypothetical protein	NA	NA	NA	NA
WP_015365927.1\|618769_619360_+	adenine DNA methyltransferase	A0A0F6TJC3	Escherichia_coli_O157_typing_phage	7.9e-96	85.0
WP_015365928.1\|619362_619593_+	hypothetical protein	A0A2H4JCC5	uncultured_Caudovirales_phage	3.8e-06	37.3
WP_015365929.1\|619589_620207_+	HNH endonuclease	A0A2H4JEM6	uncultured_Caudovirales_phage	2.3e-05	24.9
WP_015365930.1\|620219_620558_+	hypothetical protein	A0A193GYX4	Enterobacter_phage	2.3e-47	82.9
WP_041165550.1\|620740_620932_+	hypothetical protein	NA	NA	NA	NA
WP_015365932.1\|621000_621597_+	DUF1367 family protein	H9C173	Pectobacterium_phage	2.3e-79	70.7
WP_041165551.1\|621608_621911_+	DUF968 domain-containing protein	A0A1I9KFA7	Aeromonas_phage	3.6e-28	56.8
WP_015365933.1\|622066_622363_+	hypothetical protein	NA	NA	NA	NA
WP_015365934.1\|622390_622834_+	hypothetical protein	NA	NA	NA	NA
WP_015365935.1\|622845_623070_+	hypothetical protein	NA	NA	NA	NA
WP_015365936.1\|623073_624696_+\|head,tail	head-tail connector protein	A0A2H4J3N6	uncultured_Caudovirales_phage	4.3e-168	57.2
WP_015365937.1\|624695_624929_+	hypothetical protein	NA	NA	NA	NA
WP_015365938.1\|624915_625764_+	hypothetical protein	A0A2H4JEQ5	uncultured_Caudovirales_phage	1.7e-43	41.7
WP_032708647.1\|625982_626894_+	hypothetical protein	A0A2H4JC66	uncultured_Caudovirales_phage	2.9e-44	38.3
WP_015365940.1\|626953_627517_+	hypothetical protein	A0A2H4JID6	uncultured_Caudovirales_phage	5.3e-49	51.3
WP_015365941.1\|627518_629513_+	hypothetical protein	A0A2H4J6H2	uncultured_Caudovirales_phage	5.8e-183	48.0
WP_041165607.1\|629515_629965_+	GNAT family N-acetyltransferase	A0A2H4J9Z5	uncultured_Caudovirales_phage	1.2e-22	43.0
WP_015365943.1\|629967_630456_+	hypothetical protein	A0A2H4J679	uncultured_Caudovirales_phage	1.3e-08	43.0
WP_015365944.1\|630461_633173_+	transglycosylase SLT domain-containing protein	G9L6D3	Escherichia_phage	1.4e-275	57.5
WP_041165552.1\|633172_636076_+	hypothetical protein	G9L6D4	Escherichia_phage	0.0e+00	71.4
WP_041165553.1\|636080_636515_-	hypothetical protein	NA	NA	NA	NA
WP_015365947.1\|636668_637016_+	hypothetical protein	A0A2H4J7H0	uncultured_Caudovirales_phage	6.0e-19	46.9
WP_015365948.1\|637012_638623_+\|terminase	phage terminase large subunit	A0A2H4JCA3	uncultured_Caudovirales_phage	6.7e-222	69.3
WP_015365949.1\|638640_640983_+	hypothetical protein	R9TMK5	Aeromonas_phage	2.9e-85	36.8
WP_015365950.1\|640986_641244_+	hypothetical protein	L0ARW5	Klebsiella_phage	1.2e-16	49.4
WP_015365951.1\|641328_641553_+\|holin	class II holin family protein	A0A0P0ZFW5	Escherichia_phage	2.0e-20	70.1
WP_015365952.1\|641536_642073_+	lysozyme	K7PM52	Enterobacteria_phage	6.1e-71	68.8
WP_015365953.1\|642069_642429_+	hypothetical protein	R9TPM9	Aeromonas_phage	6.4e-16	44.0

DBSCAN-SWA_3

2070464 : 2122562

Enterobacteria_phage(41.03%)

bacteriocin,tail,head,integrase,portal,terminase,capsid,protease,holin

attL 2069699:2069714|attR 2119144:2119159

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2069699:2069714	attL	NA	NA	NA	NA
WP_015367360.1\|2070464_2071265_-\|bacteriocin	lipid II-degrading bacteriocin	NA	NA	NA	NA
WP_015367361.1\|2071434_2072565_-\|tail	tail fiber domain-containing protein	A0A0P0IDN1	Klebsiella_phage	7.2e-29	30.5
WP_148660024.1\|2072573_2073173_-	hypothetical protein	A0A1X7QGJ8	Escherichia_phage	2.1e-32	38.3
WP_015367364.1\|2073682_2083009_-	carbohydrate binding domain-containing protein	Q6UAW1	Klebsiella_phage	4.1e-21	36.6
WP_041165565.1\|2083075_2083675_-\|tail	tail assembly protein	Q6UAW2	Klebsiella_phage	1.2e-78	78.0
WP_041165566.1\|2083722_2084145_-	hypothetical protein	NA	NA	NA	NA
WP_015367366.1\|2084185_2084896_-	C40 family peptidase	Q6UAW4	Klebsiella_phage	3.7e-140	92.8
WP_015367367.1\|2084897_2085653_-\|tail	phage minor tail protein L	Q6UAW5	Klebsiella_phage	8.7e-132	85.3
WP_015367368.1\|2085649_2085997_-\|tail	phage tail protein	K7PJT2	Enterobacteria_phage	3.2e-36	63.5
WP_015367369.1\|2086047_2089194_-\|tail	phage tail tape measure protein	E4WL33	Enterobacteria_phage	0.0e+00	71.6
WP_071824267.1\|2089177_2089492_-\|tail	phage tail assembly protein T	E4WL32	Enterobacteria_phage	7.0e-43	78.8
WP_015367371.1\|2089512_2089941_-\|tail	phage minor tail protein G	M9NZD7	Enterobacteria_phage	1.7e-36	60.0
WP_041165567.1\|2089951_2090695_-\|tail	phage tail protein	K7PKX6	Enterobacterial_phage	1.6e-114	85.4
WP_015367373.1\|2090701_2091100_-\|tail	phage tail protein	K7P7G5	Enterobacteria_phage	5.4e-56	76.5
WP_080624897.1\|2091096_2091681_-\|tail	phage tail protein	M9NZH5	Enterobacteria_phage	2.5e-78	77.8
WP_041165568.1\|2091689_2092043_-\|tail	tail attachment protein	K7P6U9	Enterobacteria_phage	3.0e-42	65.8
WP_015367375.1\|2092053_2092473_-	DNA packaging protein	A0A2R9YJP4	Escherichia_phage	1.8e-22	52.2
WP_015367376.1\|2092523_2093549_-\|capsid	major capsid protein	K7P6G7	Enterobacteria_phage	3.4e-179	92.7
WP_015367377.1\|2093616_2093949_-\|head	head decoration protein	E4WL24	Enterobacteria_phage	6.7e-44	79.1
WP_015367378.1\|2093958_2095290_-	S49 family peptidase	A0A2I6TC87	Escherichia_phage	2.4e-172	73.8
WP_015367379.1\|2095270_2096863_-\|portal	phage portal protein	E4WL21	Enterobacteria_phage	8.2e-273	86.6
WP_015367380.1\|2096859_2097066_-	gpW family protein	K7PM10	Enterobacteria_phage	6.7e-26	88.1
WP_041165569.1\|2097065_2098988_-\|terminase	phage terminase large subunit family protein	E4WL19	Enterobacteria_phage	0.0e+00	89.5
WP_015367382.1\|2098962_2099508_-\|terminase	terminase small subunit	A0A0K2FIG2	Enterobacteria_phage	5.2e-86	86.7
WP_015367383.1\|2099801_2100221_-	hypothetical protein	Q6UAS0	Klebsiella_phage	7.7e-37	56.4
WP_015367384.1\|2100220_2100547_-	hypothetical protein	NA	NA	NA	NA
WP_134874998.1\|2100718_2100946_+	hypothetical protein	NA	NA	NA	NA
WP_173390334.1\|2101625_2102102_-	DUF2514 domain-containing protein	NA	NA	NA	NA
WP_015367388.1\|2102134_2102668_-	lysozyme	G9L6J6	Escherichia_phage	7.4e-85	83.3
WP_032706073.1\|2102669_2102918_-\|holin	class II holin family protein	A0A127KNH9	Pseudomonas_phage	4.9e-07	35.1
WP_041165571.1\|2103022_2103430_-	type II toxin-antitoxin system HicB family antitoxin	F1C593	Cronobacter_phage	2.6e-53	81.1
WP_012542177.1\|2103477_2103654_-	type II toxin-antitoxin system HicA family toxin	A0A0R6PD93	Moraxella_phage	1.4e-08	56.4
WP_041165614.1\|2104021_2104624_-	hypothetical protein	H9C175	Pectobacterium_phage	2.8e-80	71.6
WP_015367392.1\|2104637_2105669_-	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	5.2e-95	49.9
WP_015367393.1\|2105668_2105872_-	hypothetical protein	NA	NA	NA	NA
WP_015367394.1\|2105868_2106261_-\|protease	SOS-response repressor and protease LexA	K7PHB4	Enterobacterial_phage	8.3e-17	43.3
WP_015367395.1\|2106603_2106837_-	DinI family protein	K7PM44	Enterobacteria_phage	2.3e-27	74.0
WP_041165572.1\|2107030_2107828_-	hypothetical protein	NA	NA	NA	NA
WP_015367397.1\|2107837_2108032_-	hypothetical protein	NA	NA	NA	NA
WP_015367400.1\|2109603_2109831_-	hypothetical protein	NA	NA	NA	NA
WP_015367401.1\|2109827_2110310_-	class I SAM-dependent methyltransferase	H9C170	Pectobacterium_phage	5.7e-68	79.6
WP_015367402.1\|2110310_2110625_-	ead/Ea22-like family protein	A0A220NQV2	Salmonella_phage	2.5e-08	64.3
WP_173390333.1\|2110934_2111606_-	replication protein	A0A0U2JGJ0	Escherichia_phage	6.5e-62	70.2
WP_015367404.1\|2112455_2112968_-	hypothetical protein	NA	NA	NA	NA
WP_032705623.1\|2113011_2113236_-	helix-turn-helix transcriptional regulator	A0A077K9X2	Edwardsiella_phage	7.8e-12	56.7
WP_032705621.1\|2113337_2113721_+	helix-turn-helix domain-containing protein	K7PH19	Enterobacteria_phage	5.1e-19	63.5
WP_032705620.1\|2114431_2114626_+	DUF1482 family protein	NA	NA	NA	NA
WP_148660026.1\|2115789_2117268_+	3'-5' exoribonuclease	K7PLW7	Enterobacteria_phage	1.5e-58	59.3
WP_071609812.1\|2117337_2117571_+	DUF4224 domain-containing protein	NA	NA	NA	NA
WP_041165621.1\|2117554_2118574_+\|integrase	tyrosine-type recombinase/integrase	A0A192Y7M7	Salmonella_phage	6.8e-79	48.9
WP_041165574.1\|2118902_2119184_+	hypothetical protein	NA	NA	NA	NA
2119144:2119159	attR	NA	NA	NA	NA
WP_041165575.1\|2119193_2119622_+	hypothetical protein	NA	NA	NA	NA
WP_015367409.1\|2120008_2121637_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_015367411.1\|2121902_2122562_+\|protease	FtsH protease modulator YccA	A0A2H4JFM9	uncultured_Caudovirales_phage	4.9e-46	53.9

DBSCAN-SWA_4

5157668 : 5248048

108

Escherichia_phage(20.88%)

plate,tail,head,integrase,portal,terminase,capsid,protease,holin,lysis

attL 5172894:5172909|attR 5198998:5199013

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_015370148.1\|5157668_5158910_-\|integrase	integrase	A0A1B5FPC6	Escherichia_phage	3.7e-103	48.0
WP_015370150.1\|5159206_5160118_-	DNA adenine methylase	NA	NA	NA	NA
WP_015370151.1\|5160198_5161932_-	AAA family ATPase	NA	NA	NA	NA
WP_015370152.1\|5161984_5163151_-	DUF3596 domain-containing protein	I6PDJ1	Cronobacter_phage	1.6e-148	67.5
WP_015370153.1\|5163360_5163927_-	3'-5' exoribonuclease	K7PLW7	Enterobacteria_phage	8.4e-79	72.6
WP_016809723.1\|5163928_5164126_-	hypothetical protein	NA	NA	NA	NA
WP_026056029.1\|5164125_5164653_-	hypothetical protein	A0A192Y8M4	Salmonella_phage	1.3e-62	68.6
WP_015370156.1\|5164821_5165622_-	DUF2303 family protein	Q8HAA2	Salmonella_phage	3.3e-105	70.7
WP_071647615.1\|5165926_5166145_-	DNA-binding transcriptional regulator	Q37973	Salmonella_virus	2.0e-33	88.9
WP_015370157.1\|5166223_5167387_-	phage late control D family protein	Q6K1G4	Salmonella_virus	2.8e-201	93.5
WP_015370158.1\|5167383_5167869_-\|tail	phage tail protein	O80317	Escherichia_phage	5.0e-80	94.3
WP_015370159.1\|5167883_5170325_-\|tail	phage tail tape measure protein	S4TP64	Salmonella_phage	0.0e+00	88.6
WP_015370160.1\|5170317_5170437_-\|tail	GpE family phage tail protein	O80316	Escherichia_phage	8.8e-15	97.4
WP_015370161.1\|5170469_5170805_-\|tail	phage tail assembly protein	Q37846	Escherichia_phage	6.1e-45	86.2
WP_015370162.1\|5170867_5171386_-\|tail	phage major tail tube protein	S4TNZ0	Salmonella_phage	9.4e-93	99.4
WP_015370163.1\|5171401_5172580_-\|tail	phage tail sheath protein	Q37844	Escherichia_phage	6.0e-212	94.9
WP_015370164.1\|5172711_5173329_-\|tail	tail fiber assembly protein	A0A218M4J2	Erwinia_phage	3.9e-53	55.2
5172894:5172909	attL	NA	NA	NA	NA
WP_015370165.1\|5173328_5174804_-\|tail	phage tail protein	M1TAS6	Escherichia_phage	1.2e-108	49.0
WP_015370166.1\|5174800_5175409_-\|tail	phage tail protein I	A0A218M4J3	Erwinia_phage	1.6e-107	93.1
WP_015370167.1\|5175401_5176310_-\|plate	baseplate assembly protein	A0A218M4K5	Erwinia_phage	2.6e-154	96.4
WP_015370168.1\|5176316_5176664_-	GPW/gp25 family protein	A0A218M4K8	Erwinia_phage	3.1e-52	92.2
WP_032710455.1\|5176660_5177302_-\|plate	phage baseplate assembly protein V	Q6K1H6	Salmonella_virus	6.3e-99	85.9
WP_015370170.1\|5177375_5178734_-	DUF4062 domain-containing protein	NA	NA	NA	NA
WP_015370171.1\|5178785_5179247_-	phage virion morphogenesis protein	O80313	Escherichia_phage	1.1e-52	76.2
WP_015370172.1\|5179239_5179707_-\|tail	phage tail protein	A0A218M4K6	Erwinia_phage	2.3e-82	97.4
WP_001384078.1\|5179669_5179843_-	hypothetical protein	O80311	Escherichia_phage	6.2e-25	98.2
WP_015370173.1\|5179814_5180228_-\|lysis	LysB family phage lysis regulatory protein	O80310	Escherichia_phage	1.6e-63	94.2
WP_015370174.1\|5180224_5180722_-	glycoside hydrolase family 104 protein	S4TUB1	Salmonella_phage	1.1e-87	93.3
WP_015370175.1\|5180708_5181005_-\|holin	phage holin family protein	A0A0M5M1H1	Salmonella_phage	1.1e-45	95.9
WP_015370176.1\|5181007_5181211_-\|tail	tail protein X	A0A0M3ULF4	Salmonella_phage	8.3e-29	91.0
WP_015370177.1\|5181210_5181720_-\|head	head completion/stabilization protein	A0A218M4L7	Erwinia_phage	1.5e-87	94.7
WP_015370178.1\|5181813_5182563_-\|terminase	terminase endonuclease subunit	O80305	Escherichia_phage	4.9e-111	90.4
WP_015370179.1\|5182567_5183635_-\|capsid	phage major capsid protein, P2 family	O80304	Escherichia_phage	1.8e-178	89.3
WP_015370180.1\|5183711_5184566_-\|capsid	GPO family capsid scaffolding protein	Q01088	Escherichia_phage	1.7e-152	94.0
WP_015370183.1\|5186503_5187550_+\|portal	phage portal protein	A0A2I8TV74	Erwinia_phage	1.4e-188	94.0
WP_015370185.1\|5189327_5189816_-	hypothetical protein	NA	NA	NA	NA
WP_032710487.1\|5190103_5190286_-	hypothetical protein	A0A0M5M1G5	Salmonella_phage	3.6e-23	88.3
WP_161940104.1\|5190398_5192495_-	replication endonuclease	A0A218M4H2	Erwinia_phage	0.0e+00	88.1
WP_015370188.1\|5192643_5192925_-	DUF5405 family protein	A0A218M4I8	Erwinia_phage	1.4e-42	91.4
WP_032710449.1\|5192921_5193218_-	DUF3850 domain-containing protein	A0A2D1GP44	Escherichia_phage	3.0e-11	45.5
WP_015370189.1\|5193218_5193440_-	TraR/DksA family transcriptional regulator	A0A218M4I6	Erwinia_phage	5.3e-29	86.3
WP_015370190.1\|5193439_5193673_-	DUF2732 family protein	Q6K1F6	Salmonella_virus	1.7e-22	75.3
WP_015370191.1\|5193736_5194024_-	hypothetical protein	F1BUS4	Erwinia_phage	1.3e-24	57.0
WP_071647612.1\|5194104_5194305_-	DUF2724 domain-containing protein	A0A0M4RTI3	Salmonella_phage	1.0e-15	78.0
WP_015370192.1\|5194312_5194822_-	phage regulatory CII family protein	Q6K1F8	Salmonella_virus	9.2e-85	93.5
WP_014343378.1\|5194853_5194985_-	hypothetical protein	NA	NA	NA	NA
WP_032710448.1\|5195205_5196063_+	phage repressor protein CI	Q6K1G0	Salmonella_virus	5.2e-88	56.0
WP_071647611.1\|5196071_5196410_+	DUF2511 domain-containing protein	A0A0M3ULF8	Salmonella_phage	1.7e-34	63.4
WP_015370196.1\|5196431_5196932_+	PH domain-containing protein	A0A1D9C9Q4	Salinivibrio_phage	3.0e-48	62.7
WP_032710447.1\|5197015_5198047_+\|integrase	site-specific integrase	A0A0M4S6G4	Salmonella_phage	6.1e-176	87.0
WP_041165591.1\|5199228_5201361_+	right-handed parallel beta-helix repeat-containing protein	A0A286S1P0	Klebsiella_phage	2.6e-11	36.2
5198998:5199013	attR	NA	NA	NA	NA
WP_015370201.1\|5201363_5202764_+	hypothetical protein	W6E8G0	Rhizobium_phage	2.1e-14	30.7
WP_015370202.1\|5202825_5204244_-	hypothetical protein	A0A0F7L6D4	uncultured_marine_virus	1.1e-13	29.2
WP_015370203.1\|5204243_5206229_-	right-handed parallel beta-helix repeat-containing protein	A0A286S1P0	Klebsiella_phage	5.4e-40	61.6
WP_015370204.1\|5206306_5209384_-	hypothetical protein	A0A286S259	Klebsiella_phage	0.0e+00	61.4
WP_016809748.1\|5209380_5209761_-	hypothetical protein	A0A286S2A6	Klebsiella_phage	1.3e-59	81.7
WP_015370206.1\|5209773_5210250_-	DUF1833 family protein	A0A286S2B1	Klebsiella_phage	6.9e-50	64.6
WP_015370207.1\|5210236_5210710_-	hypothetical protein	A0A286S298	Klebsiella_phage	5.4e-55	61.4
WP_016809744.1\|5210731_5214139_-\|tail	phage tail tape measure protein	A0A0P0ZCJ4	Stx2-converting_phage	5.1e-187	41.8
WP_015370209.1\|5214208_5214592_-	hypothetical protein	A0A0M4QWT0	Salmonella_phage	2.3e-32	53.9
WP_015370210.1\|5214787_5215303_-	KilA-N domain-containing protein	A0A1V0E5P7	Salmonella_phage	2.5e-61	69.5
WP_016809743.1\|5215495_5215801_-	DUF4035 domain-containing protein	Q9MCS5	Enterobacteria_phage	6.2e-28	64.0
WP_015370212.1\|5215803_5216217_-\|tail	phage tail assembly chaperone	Q9MCS5	Enterobacteria_phage	1.9e-27	50.7
WP_015370213.1\|5216247_5216958_-	hypothetical protein	K7PHL2	Enterobacterial_phage	1.3e-84	69.1
WP_015370214.1\|5217014_5217362_-	DUF3168 domain-containing protein	K7PKL6	Enterobacterial_phage	1.4e-31	60.2
WP_014838144.1\|5217358_5217808_-	HK97 gp10 family phage protein	Q9MCS9	Enterobacteria_phage	5.1e-63	81.9
WP_016809742.1\|5217804_5218143_-\|head	phage head closure protein	A0A2H4JHK5	uncultured_Caudovirales_phage	3.6e-37	66.1
WP_171820353.1\|5218155_5218461_-\|head,tail	phage head-tail connector protein	Q6JIM5	Burkholderia_virus	1.5e-10	31.8
WP_015370215.1\|5218493_5218748_-	hypothetical protein	NA	NA	NA	NA
WP_015370216.1\|5218793_5220014_-\|capsid	phage major capsid protein	Q6JIM7	Burkholderia_virus	3.7e-140	64.3
WP_015370217.1\|5220023_5220731_-\|head,protease	HK97 family phage prohead protease	Q6JIM8	Burkholderia_virus	2.4e-67	62.6
WP_016809740.1\|5220706_5222026_-\|portal	phage portal protein	Q6JIM9	Burkholderia_virus	5.8e-139	59.1
WP_026056032.1\|5222032_5223769_-\|terminase	terminase large subunit	A0A0U2C138	Paracoccus_phage	3.2e-137	44.7
WP_014838137.1\|5223722_5224187_-\|terminase	phage terminase small subunit P27 family	Q9B019	Phage_GMSE-1	6.3e-48	62.1
WP_041165592.1\|5224305_5224647_-	HNH endonuclease	A0A2I6PIG1	Escherichia_phage	4.3e-46	72.1
WP_041165631.1\|5224948_5225170_-	hypothetical protein	NA	NA	NA	NA
WP_015370222.1\|5225235_5225481_-	DUF2560 family protein	A0A286N2R1	Klebsiella_phage	4.7e-18	60.5
WP_047934991.1\|5225620_5226115_-	hypothetical protein	NA	NA	NA	NA
WP_041165593.1\|5226190_5226484_-	hypothetical protein	G8C7W3	Escherichia_phage	9.8e-31	71.1
WP_142478171.1\|5226585_5227134_-	hypothetical protein	NA	NA	NA	NA
WP_015370226.1\|5227166_5227346_-	hypothetical protein	NA	NA	NA	NA
WP_015370227.1\|5227446_5227683_+	hypothetical protein	NA	NA	NA	NA
WP_015370228.1\|5227756_5228383_-	glycoside hydrolase family 19 protein	F1C591	Cronobacter_phage	6.2e-91	76.8
WP_004121581.1\|5228382_5228664_-\|holin	phage holin family protein	K7PKN9	Enterobacterial_phage	1.0e-37	81.7
WP_004121584.1\|5228650_5229046_-\|holin	phage holin family protein	K7PHB9	Enterobacterial_phage	3.2e-61	93.9
WP_015370230.1\|5229340_5229496_-	DUF3927 family protein	A0A0A0YRI9	Escherichia_phage	5.5e-09	68.8
WP_015370231.1\|5229492_5229918_-	tellurite/colicin resistance protein	Q71TK7	Escherichia_phage	1.1e-59	84.4
WP_015370232.1\|5230272_5231352_-	site-specific DNA-methyltransferase	A5LH81	Enterobacteria_phage	3.0e-170	79.0
WP_016809733.1\|5231501_5231693_-	hypothetical protein	Q8SBE3	Shigella_phage	1.7e-23	85.7
WP_051054932.1\|5231903_5232692_-	antitermination protein	K7P7B9	Enterobacteria_phage	6.9e-55	49.0
WP_016809725.1\|5233892_5234339_+	hypothetical protein	NA	NA	NA	NA
WP_016809726.1\|5234310_5234505_-	hypothetical protein	NA	NA	NA	NA
WP_016809727.1\|5234748_5235393_-	helix-turn-helix domain-containing protein	A0A1I9KG86	Aeromonas_phage	5.3e-37	39.2
WP_041165595.1\|5235488_5235698_+	cell division protein	NA	NA	NA	NA
WP_015370235.1\|5235726_5236278_+	hypothetical protein	A0A1C9II13	Salmonella_phage	1.1e-64	67.6
WP_064349867.1\|5236450_5236630_+	DUF4222 domain-containing protein	S5M7S5	Escherichia_phage	5.6e-13	65.5
WP_015370236.1\|5236619_5237531_+	conserved phage C-terminal domain-containing protein	A0A1C9IHW0	Salmonella_phage	1.7e-49	78.2
WP_015370237.1\|5237527_5237986_+	hypothetical protein	NA	NA	NA	NA
WP_015370238.1\|5238164_5239118_+	phage N-6-adenine-methyltransferase	Q8HA94	Salmonella_phage	1.5e-128	74.8
WP_015370239.1\|5239110_5240961_+	DNA cytosine methyltransferase	H9C171	Pectobacterium_phage	3.1e-199	51.7
WP_015370240.1\|5240957_5241434_+\|protease	SOS-response repressor and protease LexA	K7PHB4	Enterobacterial_phage	2.1e-14	56.3
WP_016809731.1\|5241430_5241829_+	RusA family crossover junction endodeoxyribonuclease	K7PH72	Enterobacteria_phage	7.8e-47	70.2
WP_015370243.1\|5242769_5243825_+	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	1.1e-108	54.0
WP_015370244.1\|5243916_5244486_+	recombinase family protein	A0A286S1P7	Klebsiella_phage	4.0e-89	92.3
WP_015370245.1\|5244732_5244972_-	DinI family protein	K7PKR6	Enterobacteria_phage	7.2e-32	87.3
WP_016808268.1\|5245052_5245436_+	DNA polymerase V	Q6UAV9	Klebsiella_phage	2.8e-62	86.6
WP_015370246.1\|5245564_5246770_-	DUF4236 domain-containing protein	NA	NA	NA	NA
WP_015370247.1\|5247565_5248048_-	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	5.2e-29	46.8

DBSCAN-SWA_5

5354498 : 5398339

Salmonella_phage(41.86%)

holin,tail,terminase,integrase

attL 5357670:5357686|attR 5399189:5399205

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_015370334.1\|5354498_5355965_+	IMP dehydrogenase	A0A1V0SHK8	Klosneuvirus	8.8e-88	38.7
5357670:5357686	attL	NA	NA	NA	NA
WP_015370337.1\|5357805_5359056_+\|integrase	tyrosine-type recombinase/integrase	T1S9J3	Salmonella_phage	2.2e-196	81.4
WP_032723172.1\|5359072_5359381_-	hypothetical protein	I6PD68	Cronobacter_phage	1.6e-23	53.9
WP_015370338.1\|5359380_5359683_-	hypothetical protein	NA	NA	NA	NA
WP_015370339.1\|5359679_5360270_-	adenine DNA methyltransferase	T1SA14	Salmonella_phage	4.0e-108	92.8
WP_032723171.1\|5360262_5360559_-	PerC family transcriptional regulator	T1S9J5	Salmonella_phage	5.2e-32	69.7
WP_015370341.1\|5360668_5360917_-	AlpA family phage regulatory protein	A0A193GYW1	Enterobacter_phage	8.5e-36	85.4
WP_015370342.1\|5360967_5361849_-	recombinase RecT	T1SBJ5	Salmonella_phage	1.3e-139	86.3
WP_015370343.1\|5361845_5362667_-	PD-(D/E)XK nuclease-like domain-containing protein	A0A193GYK2	Enterobacter_phage	7.5e-153	93.4
WP_032723407.1\|5362878_5363178_-	hypothetical protein	A0A0F6R7M4	Escherichia_coli_O157_typing_phage	6.1e-20	49.5
WP_015370346.1\|5363177_5363327_-	hypothetical protein	T1SA20	Salmonella_phage	1.6e-13	68.1
WP_015370347.1\|5363480_5364068_-	helix-turn-helix domain-containing protein	G9L6A6	Escherichia_phage	6.3e-61	61.0
WP_000086420.1\|5364826_5365666_+	helix-turn-helix domain-containing protein	Q286X4	Escherichia_phage	4.1e-114	94.6
WP_032723167.1\|5365662_5366448_+	replication protein	A0A193GYX1	Enterobacter_phage	1.4e-137	89.3
WP_015370350.1\|5366567_5366912_+	DUF1064 domain-containing protein	T1SA23	Salmonella_phage	2.4e-52	86.0
WP_049043511.1\|5367101_5367683_+	hypothetical protein	NA	NA	NA	NA
WP_015370353.1\|5367679_5367943_+	DUF4752 family protein	T1S9K2	Salmonella_phage	2.2e-29	75.6
WP_172587017.1\|5369647_5370154_+	DUF551 domain-containing protein	NA	NA	NA	NA
WP_015370356.1\|5370307_5370616_+	hypothetical protein	A0A193GYX4	Enterobacter_phage	1.6e-44	86.9
WP_015370357.1\|5370691_5371021_+	hypothetical protein	K7PGV5	Enterobacterial_phage	1.0e-28	60.7
WP_015370358.1\|5371078_5371663_+\|terminase	terminase small subunit	G9L6B7	Escherichia_phage	1.2e-85	84.5
WP_015370359.1\|5371659_5373129_+	hypothetical protein	Q858H3	Salmonella_phage	2.0e-281	94.1
WP_015370360.1\|5373478_5373850_-	hypothetical protein	A0A2H4ZJ80	Enterobacter_phage	4.7e-62	93.5
WP_015370361.1\|5374516_5374723_+	hypothetical protein	T1SA67	Salmonella_phage	1.4e-07	89.7
WP_015370362.1\|5374737_5376417_+\|tail	tail protein	T1S9Z7	Salmonella_phage	9.6e-264	81.4
WP_015370363.1\|5376413_5376710_+	hypothetical protein	T1SBI9	Salmonella_phage	1.9e-34	71.4
WP_032723159.1\|5376715_5376985_+	hypothetical protein	V5KSC6	Escherichia_phage	3.1e-23	83.8
WP_015370364.1\|5376995_5377694_+	hypothetical protein	G9L6C4	Escherichia_phage	2.6e-74	84.9
WP_015370365.1\|5377708_5378695_+	hypothetical protein	A0A193GZ49	Enterobacter_phage	4.4e-176	93.3
WP_015370366.1\|5378748_5379186_+	hypothetical protein	A0A193GYT9	Enterobacter_phage	5.1e-68	92.4
WP_015370367.1\|5379196_5379544_+	hypothetical protein	G9L6C7	Escherichia_phage	3.5e-35	68.1
WP_015370368.1\|5379594_5379918_+	hypothetical protein	G9L6C8	Escherichia_phage	9.1e-46	85.0
WP_015370369.1\|5379917_5380523_+	hypothetical protein	A0A0F6TJN5	Escherichia_coli_O157_typing_phage	2.1e-88	78.5
WP_015370370.1\|5380522_5383000_+	hypothetical protein	Q858G3	Salmonella_phage	0.0e+00	84.7
WP_015370371.1\|5382999_5383464_+	hypothetical protein	T1SA73	Salmonella_phage	4.8e-72	80.5
WP_015370372.1\|5383463_5384003_+	hypothetical protein	A0A0F6TJ56	Escherichia_coli_O157_typing_phage	2.4e-51	63.3
WP_015370373.1\|5384014_5386636_+	transglycosylase SLT domain-containing protein	T1SBJ1	Salmonella_phage	2.2e-49	53.2
WP_041165597.1\|5386637_5388344_+	hypothetical protein	NA	NA	NA	NA
WP_015370375.1\|5388343_5390890_+	hypothetical protein	W6MWW8	Pseudomonas_phage	1.7e-211	45.9
WP_015370376.1\|5390892_5391453_+	hypothetical protein	NA	NA	NA	NA
WP_049031478.1\|5391499_5392039_-	DUF4760 domain-containing protein	NA	NA	NA	NA
WP_041165598.1\|5392318_5393014_-	hypothetical protein	A0A193GYJ9	Enterobacter_phage	1.1e-96	74.0
WP_032723151.1\|5393331_5393592_-	hypothetical protein	T1SA06	Salmonella_phage	1.9e-33	82.4
WP_015370380.1\|5393785_5396173_+	hypothetical protein	R9TMK5	Aeromonas_phage	9.3e-87	37.1
WP_032723150.1\|5396176_5396437_+	hypothetical protein	L0ARW5	Klebsiella_phage	6.2e-21	56.6
WP_032723149.1\|5396526_5396931_+	membrane protein	T1SA79	Salmonella_phage	3.2e-56	83.6
WP_032723148.1\|5396917_5397223_+\|holin	phage holin family protein	A0A193GYK3	Enterobacter_phage	6.0e-39	81.4
WP_015370383.1\|5397212_5397842_+	glycoside hydrolase family 19 protein	Q858F0	Salmonella_phage	4.8e-99	84.7
WP_015370384.1\|5397838_5398339_+	DUF2514 domain-containing protein	Q858E9	Salmonella_phage	5.9e-60	76.9
5399189:5399205	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NC_020180

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NC_020181

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection