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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP012180 Pseudomonas syringae pv. actinidiae ICMP 18708 plasmid unnamed, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP012179 Pseudomonas syringae pv. actinidiae ICMP 18708 chromosome, complete genome 0 crisprs RT,csa3,PD-DExK,DEDDh,cas3,DinG,WYL 0 0 25 0

Results visualization

1. NZ_CP012179
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 220726 : 284664 56 Planktothrix_phage(20.0%) transposase,protease NA
DBSCAN-SWA_2 287704 : 324803 47 Pseudomonas_phage(70.0%) transposase,head,integrase,terminase,plate,lysis,tail,capsid,portal attL 284734:284780|attR 321603:321649
DBSCAN-SWA_3 466372 : 539304 66 Pseudomonas_phage(42.42%) transposase,tRNA,plate,lysis,tail NA
DBSCAN-SWA_4 694805 : 756615 39 Ralstonia_phage(28.57%) transposase,protease NA
DBSCAN-SWA_5 921265 : 983796 58 Acinetobacter_phage(15.38%) transposase,tRNA NA
DBSCAN-SWA_6 1064630 : 1115588 43 Pseudomonas_phage(15.38%) transposase,tRNA NA
DBSCAN-SWA_7 1734472 : 1784286 49 uncultured_Caudovirales_phage(40.0%) transposase,integrase attL 1755665:1755678|attR 1787633:1787646
DBSCAN-SWA_8 2520970 : 2528922 9 uncultured_Caudovirales_phage(71.43%) tRNA NA
DBSCAN-SWA_9 2800800 : 2863637 55 Tupanvirus(28.57%) transposase,integrase,tRNA attL 2798721:2798780|attR 2868798:2870602
DBSCAN-SWA_10 2925512 : 2982875 44 Salmonella_phage(25.0%) transposase,plate NA
DBSCAN-SWA_11 3278781 : 3300844 17 Enterobacteria_phage(33.33%) transposase NA
DBSCAN-SWA_12 3307638 : 3359887 39 Acidithiobacillus_phage(57.14%) transposase,integrase attL 3301909:3301968|attR 3359913:3360024
DBSCAN-SWA_13 3533047 : 3579719 46 uncultured_Caudovirales_phage(27.27%) transposase,integrase,tail attL 3576044:3576058|attR 3582559:3582573
DBSCAN-SWA_14 3723536 : 3783911 53 Planktothrix_phage(28.57%) transposase,integrase,tRNA attL 3715107:3715124|attR 3753931:3753948
DBSCAN-SWA_15 3889154 : 3944094 60 uncultured_Caudovirales_phage(28.57%) holin,transposase,integrase,tRNA attL 3893773:3893832|attR 3947638:3949304
DBSCAN-SWA_16 4007600 : 4067956 38 Acidithiobacillus_phage(22.22%) transposase NA
DBSCAN-SWA_17 4494668 : 4527791 25 Pseudomonas_virus(25.0%) transposase NA
DBSCAN-SWA_18 4530844 : 4586788 43 uncultured_Caudovirales_phage(22.22%) transposase,protease,tRNA NA
DBSCAN-SWA_19 4723357 : 4788732 51 Pseudomonas_phage(28.57%) transposase,protease,tRNA NA
DBSCAN-SWA_20 4900734 : 4956716 54 Acinetobacter_phage(33.33%) transposase NA
DBSCAN-SWA_21 5023700 : 5161388 114 Pseudomonas_phage(20.0%) transposase,protease,integrase,tRNA attL 5085942:5085956|attR 5164283:5164297
DBSCAN-SWA_22 5205696 : 5215883 10 Burkholderia_virus(37.5%) NA NA
DBSCAN-SWA_23 5992696 : 6056542 49 Pseudomonas_phage(14.29%) transposase,holin NA
DBSCAN-SWA_24 6095708 : 6132669 28 Bacillus_virus(16.67%) transposase,protease,holin,tRNA NA
DBSCAN-SWA_25 6400866 : 6531865 93 Acidithiobacillus_phage(18.75%) transposase,protease,integrase attL 6466579:6466594|attR 6530031:6530147
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage