CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
NC_020523	Corynebacterium callunae DSM 20147 plasmid pCC1, complete sequence	0 crisprs	NA	0	0
NC_020553	Corynebacterium callunae DSM 20147 plasmid pCC2, complete sequence	0 crisprs	csa3,DEDDh	0	1
NC_020506	Corynebacterium callunae DSM 20147, complete sequence	2 crisprs	csa3,cas3,DEDDh,WYL,DinG	2	2

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NC_020506_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_020506_1

330077-330172

Orphan

Consensus_repeat	Method
AAGCGTGCCGATTTACGACGAAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_020506_1

>merge|NC_020506|1|330077-330172|CRISPRCasFinder
AAGCGTGCCGATTTACGACGAAATGTCCTTTTAGGGCTCTTGCTTGCGTAAATTGGCACCGCTAAGGGCCTCGAAGCGTGCCGATTTACGACGAAA

>NC_020506|1|1|330077-330172|CRISPRCasFinder
AAGCGTGCCGATTTACGACGAAA	TGTCCTTTTAGGGCTCTTGCTTGCGTAAATTGGCACCGCTAAGGGCCTCG
AAGCGTGCCGATTTACGACGAAA

Protein	Signature genes	Signature genes Name	Protein_function
NC_020506.1\|WP_015650199.1\|328483_329797_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340927
NC_020506.1\|WP_015650192.1\|317698_318892_-\|alcohol-dehydrogenase-catalytic-domain-containing-protein	unknown	unknown	gnl\|CDD\|176242
NC_020506.1\|WP_015650189.1\|311766_312801_+\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|224137
NC_020506.1\|WP_015650207.1\|337845_339219_-\|M1-family-metallopeptidase	unknown	unknown	gnl\|CDD\|341066
NC_020506.1\|WP_015650198.1\|327696_328470_-\|creatininase	unknown	unknown	gnl\|CDD\|275241
NC_020506.1\|WP_015650195.1\|323790_324102_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224278
NC_020506.1\|WP_035107974.1\|333918_334689_+\|NYN-domain-containing-protein	unknown	unknown	gnl\|CDD\|350289
NC_020506.1\|WP_015650200.1\|330353_331217_-\|glucose-1-phosphate-thymidylyltransferase-RfbA	unknown	unknown	gnl\|CDD\|130274
NC_020506.1\|WP_029703714.1\|325483_326545_-\|NAD(P)-dependent-alcohol-dehydrogenase	unknown	unknown	gnl\|CDD\|176186
NC_020506.1\|WP_015650208.1\|339224_341228_-\|S9-family-peptidase	unknown	unknown	gnl\|CDD\|224422
NC_020506.1\|WP_015650194.1\|323233_323794_+\|type-1-glutamine-amidotransferase	unknown	unknown	gnl\|CDD\|153228
NC_020506.1\|WP_015650204.1\|334776_335757_+\|iron-siderophore-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|238566
NC_020506.1\|WP_015650206.1\|336625_337849_-\|hypothetical-protein	unknown	unknown	unknown
NC_020506.1\|WP_015650209.1\|341598_342120_-\|excalibur-calcium-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|377566
NC_020506.1\|WP_155861912.1\|315646_315820_+\|hypothetical-protein	unknown	unknown	unknown
NC_020506.1\|WP_015650201.1\|331217_332573_-\|sugar-nucleotide-binding-protein	unknown	unknown	gnl\|CDD\|224016
NC_020506.1\|WP_015650190.1\|312986_315029_+\|bifunctional-metallophosphatase/5'-nucleotidase	unknown	unknown	gnl\|CDD\|223808
NC_020506.1\|WP_015650193.1\|319477_322159_+\|excinuclease-ABC-subunit-UvrA	unknown	unknown	gnl\|CDD\|223256
NC_020506.1\|WP_015650202.1\|332572_333592_-\|dTDP-glucose-4,6-dehydratase	unknown	unknown	gnl\|CDD\|224013
NC_020506.1\|WP_015650205.1\|335757_336519_+\|siderophore-interacting-protein	unknown	unknown	gnl\|CDD\|99790

Protein	Function_ID	Function_description	E-value
NC_020506.1\|WP_015650199.1\|328483_329797_-\|MFS-transporter	gnl\|CDD\|340927	cd17369, MFS_ShiA_like, Shikimate transporter and similar proteins of the Major Facilitator Superfamily. This subfamily is composed of Escherichia coli shikimate transporter (ShiA), inner membrane metabolite transport protein YhjE, and other putative metabolite transporters. ShiA is involved in the uptake of shikimate, an aromatic compound involved in siderophore biosynthesis. It has been suggested that YhjE may mediate the uptake of osmoprotectants. The ShiA-like subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.07996e-110
NC_020506.1\|WP_015650192.1\|317698_318892_-\|alcohol-dehydrogenase-catalytic-domain-containing-protein	gnl\|CDD\|176242	cd08282, PFDH_like, Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH). Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.	0
NC_020506.1\|WP_015650189.1\|311766_312801_+\|glycosyltransferase-family-2-protein	gnl\|CDD\|224137	COG1216, COG1216, Predicted glycosyltransferases [General function prediction only].	3.10102e-50
NC_020506.1\|WP_015650207.1\|337845_339219_-\|M1-family-metallopeptidase	gnl\|CDD\|341066	cd09603, M1_APN_like, Peptidase M1 family similar to aminopeptidase N catalytic domain. This family contains mostly bacterial and some archaeal M1 peptidases with smilarity to the catalytic domain of aminopeptidase N (APN; CD13; alanyl aminopeptidase; EC 3.4.11.2), a type II integral membrane protease belonging to the M1 gluzincin family. APN preferentially cleaves neutral amino acids from the N-terminus of oligopeptides and, in higher eukaryotes, is present in a variety of human tissues and cell types (leukocyte, fibroblast, endothelial and epithelial cells). APN expression is dysregulated in inflammatory diseases such as chronic pain, rheumatoid arthritis, multiple sclerosis, systemic sclerosis, systemic lupus erythematosus, polymyositis/dermatomyosytis and pulmonary sarcoidosis, and is enhanced in tumor cells such as melanoma, renal, prostate, pancreas, colon, gastric and thyroid cancers. It is predominantly expressed on stem cells and on cells of the granulocytic and monocytic lineages at distinct stages of differentiation, thus considered a marker of differentiation. Thus, APN inhibition may lead to the development of anti-cancer and anti-inflammatory drugs. APNs are also present in many pathogenic bacteria and represent potential drug targets. Some APNs have been used commercially, such as one from Lactococcus lactis used in the food industry. APN also serves as a receptor for coronaviruses, although the virus receptor interaction site seems to be distinct from the enzymatic site and aminopeptidase activity is not necessary for viral infection. APNs have also been extensively studied as putative Cry toxin receptors. Cry1 proteins are pore-forming toxins that bind to the midgut epithelial cell membrane of susceptible insect larvae, causing extensive damage. Several different toxins, including Cry1Aa, Cry1Ab, Cry1Ac, Cry1Ba, Cry1Ca and Cry1Fa, have been shown to bind to APNs; however, a direct role of APN in cytotoxicity has been yet to be firmly established.	2.35718e-150
NC_020506.1\|WP_015650198.1\|327696_328470_-\|creatininase	gnl\|CDD\|275241	TIGR04448, creatininase, creatininase. Members of this family are creatininase (EC 3.5.2.10), an amidohydrolase that interconverts creatinine + H(2)O with creatine. It should not be confused with creatinase (EC 3.5.3.3), which hydrolyzes creatine to sarcosine plus urea. [Central intermediary metabolism, Nitrogen metabolism].	8.4842e-100
NC_020506.1\|WP_015650201.1\|331217_332573_-\|sugar-nucleotide-binding-protein	gnl\|CDD\|224016	COG1091, RfbD, dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane].	4.1532e-99
NC_020506.1\|WP_015650200.1\|330353_331217_-\|glucose-1-phosphate-thymidylyltransferase-RfbA	gnl\|CDD\|130274	TIGR01207, Glucose-1-phosphate_thymidylyltransferase_1, glucose-1-phosphate thymidylyltransferase, short form. Alternate name: dTDP-D-glucose synthase homotetramer This model describes a tightly conserved but broadly distributed subfamily (here designated as short form) of known and putative bacterial glucose-1-phosphate thymidylyltransferases. It is well characterized in several species as the first of four enzymes involved in the biosynthesis of dTDP-L-rhamnose, a cell wall constituent and a feedback inhibitor of the enzyme. [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides].	1.28274e-161
NC_020506.1\|WP_029703714.1\|325483_326545_-\|NAD(P)-dependent-alcohol-dehydrogenase	gnl\|CDD\|176186	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines.	1.21306e-177
NC_020506.1\|WP_015650195.1\|323790_324102_+\|hypothetical-protein	gnl\|CDD\|224278	COG1359, COG1359, Uncharacterized conserved protein [Function unknown].	0.00272903
NC_020506.1\|WP_015650194.1\|323233_323794_+\|type-1-glutamine-amidotransferase	gnl\|CDD\|153228	cd03134, GATase1_PfpI_like, A type 1 glutamine amidotransferase (GATase1)-like domain found in PfpI from Pyrococcus furiosus. A type 1 glutamine amidotransferase (GATase1)-like domain found in PfpI from Pyrococcus furiosus. This group includes proteins similar to PfpI from P. furiosus. and PH1704 from Pyrococcus horikoshii. These enzymes are ATP-independent intracellular proteases and may hydrolyze small peptides to provide a nutritional source. Only Cys of the catalytic triad typical of GATase1 domains is conserved in this group. This Cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. For PH1704, it is believed that this Cys together with a different His in one monomer and Glu (from an adjacent monomer) forms a different catalytic triad from the typical GATase1domain. PfpI is homooligomeric. Protease activity is only found for oligomeric forms of PH1704.	5.48609e-79
NC_020506.1\|WP_015650204.1\|334776_335757_+\|iron-siderophore-ABC-transporter-substrate-binding-protein	gnl\|CDD\|238566	cd01146, FhuD, Fe3+-siderophore binding domain FhuD. These proteins have been shown to function as initial receptors in ABC transport of Fe3+-siderophores in many eubacterial species. They belong to the TroA-like superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA-like protein is comprised of two globular subdomains connected by a long alpha helix and binds its specific ligands in the cleft between these domains.	5.05679e-70
NC_020506.1\|WP_015650208.1\|339224_341228_-\|S9-family-peptidase	gnl\|CDD\|224422	COG1505, COG1505, Serine proteases of the peptidase family S9A [Amino acid transport and metabolism].	0
NC_020506.1\|WP_035107974.1\|333918_334689_+\|NYN-domain-containing-protein	gnl\|CDD\|350289	cd18722, PIN_NicB-like, LabA-like PIN domain of Pseudomonas putida S16 NicB and related proteins. Curiously NicB from Pseudomonas putida S16 is described as a putative NADH-dependent hydroxylase involved in the microbial degradation of nicotine. This subfamily also includes the uncharacterized CPP15 (plasmid) protein from Campylobacter jejuni. This subfamily belongs to LabA-like PIN domain family which includes Synechococcus elongatus PCC 7942 LabA, human ZNF451, uncharacterized Bacillus subtilis YqxD and Escherichia coli YaiI, and the N-terminal domain of a well-conserved group of mainly bacterial proteins with no defined function, which contain a C-terminal LabA_like_C domain. Curiously, a gene labeled NicB from Pseudomonas putida S16, which is described as a putative NADH-dependent hydroxylase involved in the microbial degradation of nicotine also falls into the LabA-like PIN family. The PIN (PilT N terminus) domain belongs to a large nuclease superfamily. The structural properties of the PIN domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions; in some members, additional metal coordinating residues can be found while some others lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	1.21333e-33
NC_020506.1\|WP_015650190.1\|312986_315029_+\|bifunctional-metallophosphatase/5'-nucleotidase	gnl\|CDD\|223808	COG0737, UshA, 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism].	1.23693e-82
NC_020506.1\|WP_015650193.1\|319477_322159_+\|excinuclease-ABC-subunit-UvrA	gnl\|CDD\|223256	COG0178, UvrA, Excinuclease ATPase subunit [DNA replication, recombination, and repair].	0
NC_020506.1\|WP_015650202.1\|332572_333592_-\|dTDP-glucose-4,6-dehydratase	gnl\|CDD\|224013	COG1088, RfbB, dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane].	0
NC_020506.1\|WP_015650205.1\|335757_336519_+\|siderophore-interacting-protein	gnl\|CDD\|99790	cd06193, siderophore_interacting, Siderophore interacting proteins share the domain structure of the ferredoxin reductase like family. Siderophores are produced in various bacteria (and some plants) to extract iron from hosts. Binding constants are high, so iron can be pilfered from transferrin and lactoferrin for bacterial uptake, contributing to pathogen virulence. Ferredoxin reductase (FNR), an FAD and NAD(P) binding protein, was intially identified as a chloroplast reductase activity, catalyzing the electron transfer from reduced iron-sulfur protein ferredoxin to NADP+ as the final step in the electron transport mechanism of photosystem I. FNR transfers electrons from reduced ferredoxin to FAD (forming FADH2 via a semiquinone intermediate) and then transfers a hydride ion to convert NADP+ to NADPH. FNR has since been shown to utilize a variety of electron acceptors and donors and has a variety of physiological functions including nitrogen assimilation, dinitrogen fixation, steroid hydroxylation, fatty acid metabolism, oxygenase activity, and methane assimilation in a variety of organisms. FNR has an NAD(P)-binding sub-domain of the alpha/beta class and a discrete (usually N-terminal) flavin sub-domain which vary in orientation with respect to the NAD(P) binding domain. The N-terminal moeity may contain a flavin prosthetic group (as in flavoenzymes) or use flavin as a substrate. Because flavins such as FAD can exist in oxidized, semiquinone (one-electron reduced), or fully reduced hydroquinone forms, FNR can interact with one and two electron carriers. FNR has a strong preference for NADP(H) vs NAD(H).	2.73502e-48
NC_020506.1\|WP_015650209.1\|341598_342120_-\|excalibur-calcium-binding-domain-containing-protein	gnl\|CDD\|377566	pfam05901, Excalibur, Excalibur calcium-binding domain. Extracellular Ca2+-dependent nuclease YokF from Bacillus subtilis and several other surface-exposed proteins from diverse bacteria are encoded in the genomes in two paralogous forms that differ by a ~45 amino acid fragment, which comprises a novel conserved domain. Sequence analysis of this domain revealed a conserved DxDxDGxxCE motif, which is strikingly similar to the Ca2+-binding loop of the calmodulin-like EF-hand domains, suggesting an evolutionary relationship between them. Functions of many of the other proteins in which the novel domain, named Excalibur (extracellular calcium-binding region), is found, as well as a structural model of its conserved motif are consistent with the notion that the Excalibur domain binds calcium. This domain is but one more example of the diversity of structural contexts surrounding the EF-hand-like calcium-binding loop in bacteria. This loop is thus more widespread than hitherto recognized and the evolution of EF-hand-like domains is probably more complex than previously appreciated.	1.72127e-15

>NC_020506.1|WP_015650199.1|328483_329797_-|MFS-transporter
MSVQNPAIVSATPDTTISTTISTTETSKKDLRNAVRASFIGTFVEWFDYAAYMYMASIIAGVFFPELTGRAALINTFALFALSFLIRPIGAVAWGHIGDRLGRTKSLSASILFMSLATFCIALLPGYNSIGIAAPILLLVLRLIQGFSASGEYAAASTYISESAPQNRRGLFASVVPAATACGLLLGSLFVALLTSLLDDASLASWGWRLPFLLAAPLGIVGLIIRRMAPETHVADEDSAKKLPILEVFKYPRALLVAFSGAILNAIGFYMVLAYLPTYLSEELGMSSSSAFIATTISSTVYAVLVVATGALSDRLGRRTTMLIAAALFAVFSIPAFLALDSASFVGVILIQVGMGACLALNDGVLPSFISEQFPADVRLTGFALTFNCANAFFGGTAAMIATWMIGASGNVIAPAYYMVAAAIITAIGVAFAAKSK
>NC_020506.1|WP_015650198.1|327696_328470_-|creatininase
MVFAANMTWEQYAAKTDGVAIIPAGSCEQHGPHLPLSTDSIIATEISRMVAEQIDGIVLPTLNYGYRSSPYSGGGPLFPGTVDLSLNTMVELASNLLDELLGDGFRKILFLSAHFENQAPILEAMHLAQRRHGTDNQIVLANWWDPLKDSVMDEVFSDIMFPGWDLEHAAVTETSLLMHLAPELVHADKLPAKEAFAVPPYLRVPLQPSDIPSHGALADAVGATSEKGKIIADAAATSIAEICAYEFGVQVKTSVQL
>NC_020506.1|WP_029703714.1|325483_326545_-|NAD(P)-dependent-alcohol-dehydrogenase
MSIQVKALQKTGPEAPFEVKVINRRDPREDDVVIDIRAAGICHSDIHTIRNEWGPAHFPLSVGHEIAGVVSAVGSGVTKWKVGDRVGVGCLVDSCGECEQCLAGFENHCLKGAVGTYNSEDVDGTITQGGYSEKVVVNERFVCSIPDELEFDVAAPLLCAGITTYSPIARWNVKEGDKVAVMGLGGLGHMGVQIAAAKGADVTVLSRSLRKAELAKTLGAARTLATTDENFFEDHVGEFDFILNTISASIPVDKYLRLLKPHGVMAVVGLPPEAQAVSFGSLIGGSKVLTGSNIGGIAETQEMLNFCAEHGLGALIEKIGVNDVDAAYERVVAGDVQFRFVIDTETFTEAEAV
>NC_020506.1|WP_015650195.1|323790_324102_+|hypothetical-protein
MIEVALSVVLRAKPGKEEEVAEFLRSARSIVEQEDGTRAWFALQFDASTFGIFDVFPDDEARQAHLTGSVGQALAAQGAELFSVEPDIQHVDVLAYKLPGESV
>NC_020506.1|WP_015650194.1|323233_323794_+|type-1-glutamine-amidotransferase
MSDELKGKRVAILAADGVERVELEQPRQALLDAGATTELLSLHEGEIKARNNDLDEAGTFLVDALVKSVSVDDYDALLLPGGTVNPDQLRMDTDAVGFVRDFVATGKLVASICHGPWTLIEAGVANGRTLTSYPSIRTDLRNAGANVVDEEVVRDGNLVTSRWPDDLPAFCSTIVELLSQSKEGQS
>NC_020506.1|WP_015650193.1|319477_322159_+|excinuclease-ABC-subunit-UvrA
MVNPPLPESTQPLPVQPDVRVLGAREHNLQDIDLAVPRDALVVFTGVSGSGKSSLAFGTLFAESQRRYLESVAPYARRLIDQVGVPDVDSITGMPPAVALQQQRGGRSARSSVGSITTISSLVRMLYSRAGNYPDDQPMLYAEDFSTNTVQGACPDCHGIGRVYEVTEDKMVPDPSLTIRERAIASWPKAWHGHQLRDVLVSLGYDVDVPWKDLPREEREWILYTEETPHVPVHSRLTLAEARAAIAAGVEPSYSGTFVGARKYVLDTFANTKSESMKRRVAQFLTVTPCPACHGKRLKPEALSVTFEDRDIADLSSLPLAQLSVLIEKAVEQATADLDVIETADHATDVTALSDAAQQSVDAGETPRAGASNLRREANHSAGKLAATTRLGTELVSRLRPIIDLGLGYLSLDRTTPTLSGGELQRLRLATQLTSDLFGVVYVLDEPSAGLHPQDISALLGILDGLKRRGNSLFVVEHSVDVMRHADWLVDIGPGAGERGGRVLYSGPTDGLAQVEESVTRGYLFGGSGLVHRAPREPQGWLYLEHVTRNNLHDVSISVPLGVFTAVTGVSGSGKSSLVSQALPELLGERLGRTAQTQDAAAPEDDELLLSGEPEEVKGTIRGDFSGLRRVVSIDQRPIGRTPRSNVATYTGMFDHVRRRFAETPEARARGYKPGRFSFNVAGGRCPTCNGEGSVMVELLFLPSVYTECPDCHGTRYQSSTLEIIWRGCNIAQILAMSVEEAYDFFHGEFDIMRSLTALIDVGLGYLRLGQPATELSGGEAQRVKLASELQRSQRGDTLYVLDEPTSGLHCADSDRLVAHLQTLVEAGNTVVAVELDMRVVVAADYVIDLGPGAGEDGGTVVASGTPEEVASCGVGASAPYLKTALHEAVSRG
>NC_020506.1|WP_015650192.1|317698_318892_-|alcohol-dehydrogenase-catalytic-domain-containing-protein
MTSSNRAVIFEDVGTMRVESLDFPKLEMPNGKRAPHGVILKIIATNICGSDLHIYRGSFPVPQGMVMGHEMTGEVIEVGSDVEFLSEGDLVSVPFNVACGRCRNCRARRTDVCENVNPDTACGAYGFNLGNWQGGQAEYMFVPYADFQLLRFPDKDQAMEKIRDLALLSDILPTAFHGLMEAGAKPGSTVYIAGAGPVGRCGAAAARLLGASCIIVGDYHQDRLDLMKNNGCETINLNEDVPLTDQIEAILGEPMVDCAVDYVGSEAHGIGRESKDMNPAYAINQVIDATRAGGATGIVGVYGPDPLATSKAEQEGTFPLDFGKAWIKSPRISAGQAPIMHYNRDLMMSILWDRMPYLSSMLNTKVISLDEAPEAYDTFDKGVSEKFIIDPHGMIPS
>NC_020506.1|WP_155861912.1|315646_315820_+|hypothetical-protein
MCDVFAPLRRAEGMESLLMVIVHVAWLHGAVIDQFIPIADPRHLRRLIRHCAMNVKA
>NC_020506.1|WP_015650190.1|312986_315029_+|bifunctional-metallophosphatase/5'-nucleotidase
MKRLSRAALAIVTTAAVSASAFAPASAQAATVELNILGVTDFHGHIAQDLEKGEMGAAGLACYVESERAANPNTSFITVGDNIGGSPFVSSILKDAPTLAALSEIGVDASALGNHEFDQGYADLAGRVSLDGTGLAQFPYLGTNVEGGIPAPAASEVVELGGVRVAYVGSVTDETSTLVSPAGIPGITFTNDLNAVNAEADRIMAAGEADVVIALMHSPAQATDAFSTNVDVVFAGHTHEQRVETGPARDGKQPLVVIQGMEYGKFVSDVEISYDSTAKKITAIEAVNVDAATASGACGVSNALVTSVAGIVDAAKIASDVEGAKVVATIENSFFRGADSAGATGTNRGVESSLNNLIAEAGLQAINAQTPLNADIGVMNAGGVRADLEAGDVTFSEAFATQNFSNTYGVVDITGADFIAALEQQWKDPAADRPRLALGLSNNVQYSYNPNAAQGERITHVTINGEPIDETKTYRIAGSTFLLSGGDGFTAFTNGTDITDSGLVDIDLFNSYLAANTGVDVRANQASVGIELSGAALADDSRLIPGEELTVDLSALSYTGGEATPTTVTVTLGAETVTVPVDNTIVPKLDTTGTATATLTVPAGATELKIETDAGTTFTLPVVATSKPADGSSVGSSAGSLVAILGVLGALGGLLGVFLHSPQGAPFLTQLHALINQSKA
>NC_020506.1|WP_015650189.1|311766_312801_+|glycosyltransferase-family-2-protein
MSNQRIGVVIVSYGHEQDVANLVDSFASQLKDGDRVVVVDNRKPWVLESMVGERLKAHGVEIINHDNGGFAAGCNVGAAAIVDDVDLLFFLNPDTVIDDPSLFNSLRRVDEQWAAFMPYLLLPDGTVNSAGNALHISGLSWVTGLDEKPEDDKDISEISIASGACLVVRTQWWKRLGGMEEMYFMYHEDTDFSARLLLAGGKIGLLHSAYVTHHYDYAKGDYKWIYIERNRHVLLLSVLPLPLLAVLVPQILGVNLGLWAIAAKEDRLALKVKSLKLLIRDLPAIFKLRRRTQKLAQLNAAQYLEKMEWRLDNPNLGSIGSNKIVNAVYGTYYKLCLKVLRRKA
>NC_020506.1|WP_015650200.1|330353_331217_-|glucose-1-phosphate-thymidylyltransferase-RfbA
MKGIILAGGSGTRLYPITKGISKQLMPIYDKPMVYYPLTTLIQSGISDILIITTPEDRSSFERLLGDGSAWGISLSYAVQPSPDGLAQAFIIGEDFIGSDDVALVLGDNIFDGAQLGHSLKQCSDPSGGIVFAYEVSDPERYGVVEFDAANKAVSIEEKPTAPKSNFAVVGLYFYDNRVVDIAKSIKPSSRGELEITSVNDAYLQQGALTVQRLDRGDVWLDTGTIDSMSEASSYVEVLQKRTGNIIGSPEVAAYREGFISAAQLTVLGEELKKSGYGNYLLRVAGE
>NC_020506.1|WP_015650201.1|331217_332573_-|sugar-nucleotide-binding-protein
MEYGKQLTSHTTDIDGLIIFDLPVHGDNRGWFKENWQRTKMVELGLPDFGPVQNNMSFNALKGVTRGMHAEPWDKFVSVAVGSVFGAWVDLREGSATYGKTVTVTIGPDTAVYVPRGIANGFQALEDGTLYTYLVNDHWSPDAEYSFVNLNMINWPLKPTEISDKDANHPALIDATPVPPRKVLVVGAGGQLGTALRAVFPDAEFLSRADLDITADLRVAKQWKQYSTIINAAAYTAVDRAENDRAAAWAINATAVANLATIARENNLTLVHVSSDYVFDGSQESYTEDAPFSPLGVYGQSKAAGDIAAATAPRHYIVRTSWVIGDGNNFVRTMKSLDERGIKPSVVDDQIGRLSFTADIAAGIAHLLEVGAEFGTYNLSNSGEPASWADIARAVFTEPSDVTGVSTAEYFADKETAPRPLNSVLDLSKIEATGFNAPTWQSRLNDYLKEL
>NC_020506.1|WP_015650202.1|332572_333592_-|dTDP-glucose-4,6-dehydratase
MTSLLVTGGAGFIGANFVRQTVEQHSEYTQITVLDKLTYAGNADNLKGLPDSKVTLIEGDICDAELVDTLVKDHDITVHFAAESHNDNSLKDPSPFIHTNLIGTYTLLEAVRKHNKRFHHISTDEVFGDLELDDPNRFTEDTAYKPSSPYSATKAGSDHLVHAWIRSFGIQATMSNCSNNYGPYQHIEKFIPRQITNILAGLTPKLYGTGEQVRDWIHVDDHNDAVHLILKEGKIGESYIIGADNDHVNNKQVIELICELMGLDKNAYEHVADRPGHDMRYAMDSTKLRTELGWVPKYTDTDSGMRKGVEQTIDWYRNNESWWRPAKDNVEATYAKQGQ
>NC_020506.1|WP_035107974.1|333918_334689_+|NYN-domain-containing-protein
MRSNETYRQPQLRPVLTAILIDGGFYRRRAYSLFGDKSPEDRANELEEYARRHIRKSRSSLYRIFYYDCPPSEKVIFHPLTRTQVNLGKSEQFRWTNDFFDALNHKRKFALRRGEELETQQGYSLKQKSLKKLLNGTLKLEELTEADFSLDITQKGVDMRIGLDIASLAERKTVNQIVMITGDSDFVPAAKHARREGIDFILDPMWADIARSLSEHIDGVRQCVKNYPENKRDPLYFENLHKEILPTVSQVDEEEL
>NC_020506.1|WP_015650204.1|334776_335757_+|iron-siderophore-ABC-transporter-substrate-binding-protein
MILRFPSLAKPQIALKKALAPACIGLALTLSACSGSSTSNTGSTETAGSTETAAASYTVEHAMGTTVIDGPVKRVVVIDSPHLDALLALGITPVGATESGAENGFPTYLADQLQDTESVGSTSEPNLEKIASLDPDLIIGAKVRHEGIYEQLSAIAPTVMSEGSGTNWHEQAEITAAAVNRSAEMTDLINDLSTRADEVGEEVGAEGQTVSMVRFRPDNFRLYGPETFSGSILEEVGYDLGEKEWNEYSMMELSTENFGQIDGDLIFYTIPGEPAATTYPQVSELWKDSPAVQQGKTYEFEDETWMVGIGVLGGNEILDDLEEALS
>NC_020506.1|WP_015650205.1|335757_336519_+|siderophore-interacting-protein
MSTFNKSPNVLFPVRVARAQRVSPGFMRITFAAPELKFLPSRSLDQRIKILFPKTPHLPQSLAEPILPESQWRKQWRELDPDIRPHLRTYTIAQSRPKVAEVDIDFFLHDQTPTFSAVNWARTARIGDHAAISAPDTRKSPGLHGIQWRPGPARHAVLIGDETAIPAMRGILSAFRRKNAVVLLHAKHPLDAQLLGDHEPFSDQTLKRIKKQLTPETYIWCAGESLWVAQLRQEFLATGLSPEQIQVQGYWNR
>NC_020506.1|WP_015650206.1|336625_337849_-|hypothetical-protein
MKYLTLATIIAGLSGFVVIIIAAWALGDSGTLAEEFTAYWGLFFAGTGVLTGLTQETTRAVTAGRSGAGGTFQPFKFAFIVGAVVLVLLAVSAPFWIGQLLSSQQGIGVGMLAIGLASYAIQATISGILSGCQLWKEYAALISLDTGVRMLLAVGAWLLGYQLLAFLVITVIGSISWLVIVLCFGSVRSVLGSVADVSARVFVRQALLAMAASGATAILITGFPTLLKFANPTSVAGTVSMAAVSYAVILTRAPLLVPLQQFQSAIIVRFVSGKLGPFKALTGPLALVWGIGLVGAGLAWVAGPWLMEVVLRKDLFTVPGWLLALLTLGATTTASLMVSGCAAIAFEKHGIYLAGWVVATVVAVGFLLGPFSLGLAAALALICGPLCGLIVHLGALFSGSRTTKAEI
>NC_020506.1|WP_015650207.1|337845_339219_-|M1-family-metallopeptidase
MIKRRLRTTPVPGTSDSYTGINFNLGYHIRGYELDLTYRVAPNLLMGTATLRMDNYHALDSLTLDLANSLRVEKVSAIGTAGTRVEVARFRHSDRKLRITFRNQIPVDQEFSLVIRYRGNPRPVRSQWGMIGWEELSNGSLVASQPCGAPSWLPCDDTPDEKALFDVKIAVDNGYSAIATGELIGRSVSGSMTTWHYRTREGMATYLAAIHVGDYEEVSLGKAASGVPVLAYIPRGSSALKARILHDFSKQVAMVDAYEELFGPYPFSSYRVVITEDDLEIPLEAHGLSTFGANHATGKDTWERLIAHELSHQWFGNSLGLAQWNDIWLNEGFACYAEWLWLEKAGVKSAAASALSFYEELAKLPQDLLLADPGAKDMFDDRVYKRGALTVHALRVLLGDAAFFSAIQSYVAEGRHGLVEPRDLKRHLYMVSTDHAALDALWNSWLRELPLPEFPTA
>NC_020506.1|WP_015650208.1|339224_341228_-|S9-family-peptidase
MTDYTFLEDIDTPEALAWAKKWSGESVEKLKSPDKDALEARLLAALDTDDRIAYVSRRGKKLYNFWRDAQHPRGVWRTTTLESYYTAQPKWEVLIDVDALAEAEGENWVWKGAVVRSPERDLALVKLSRGGADATVIREFDLVSRTFVESEPFELPEAKSSVTWIDADTLLVGTDTGEGSLTDSGYPARAVKWKRGTAIEQAEIFFEGDQQDVATHAWRDSTPGFERIFASRSLDFYNSETYLETADGLVLLDVPTDCDVIVKNQWLFINPRTDYAGIQAGGLGVLELDAFLQRARDFKQVFEPSASTSLQGLATTKNFLVLTLLNNVSTDIITVPLADPVAKPTRMELPEHATAHVVATSPLDGDEIWVQATSFTQAPTLMRTVLPGGLEEVKHAPSQFDNAGQETRQHWATSADGTKIPYFITGNFSDPTAQRKTLVHAYGGFEVSLTPSHSPTRGIAWLEKGYYFVEANLRGGGEFGPQWHSQATKLNRMKVWEDHYAVLQDLVARGYAKPEQIAIRGGSNGGLLTSGALTQYSESFGAAVVQVPLTDMLRYHTWSAGASWMAEYGNPDDPAERAVLEKYSPLHNVEKRPYPPALVTTSTRDDRVHPAHARLFAQALRDAGQPVDYYENTEGGHAGASDNKQVAFMEALIYTWIDAALDAEGNI
>NC_020506.1|WP_015650209.1|341598_342120_-|excalibur-calcium-binding-domain-containing-protein
MRKTIITMLATTAIVFSAISPVQAQTVDTDTDASVSSELSSGTSSGSSEDSDLSNRDIIFGIAAIAAVGGLIAGGVHWAVQQRMIPNPLPGIIPNPPALAPQPVAPAPAPAPAPQAVAPQVVAPAPAPVQTNRTYKNCTEVWNVLGRSIRQSDPGYGAHLDRDRDGIGCESRP

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Crispr_ID: NC_020506_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_020506_2

920596-920734

Orphan

Consensus_repeat	Method
CACGGAGGTCATGCTGGGCATGGTGGTCATG	CRISPRCasFinder

2 spacers

The CRISPR arrays of NC_020506_2

>merge|NC_020506|2|920596-920734|CRISPRCasFinder
CACGCAACTCACACTGGTCATGAGGGCCACGGAGGTCATGCTGGGCATGGTGGTCATGAGGGCCACGGAGGTCATGCTGGGCATGCTGGGCACGACGAACACGGAGGTCATGCTGGGCATGGTGGTCATGGTGGTCACG

>NC_020506|2|2|920596-920734|CRISPRCasFinder
CACGCAACTCACACTGGTCATGAGGGCCACG	GAGGTCATGCTGGGCATGGTGGT
CATGAGGGCCACGGAGGTCATGCTGGGCATG	CTGGGCACGACGAACACGGAGGT
CATGCTGGGCATGGTGGTCATGGTGGTCACG

Protein	Signature genes	Signature genes Name	Protein_function
NC_020506.1\|WP_015650745.1\|923157_923481_+\|antibiotic-biosynthesis-monooxygenase	unknown	unknown	gnl\|CDD\|224278
NC_020506.1\|WP_015650742.1\|919948_920545_+\|YdhK-family-protein	unknown	unknown	gnl\|CDD\|369427
NC_020506.1\|WP_015650748.1\|925465_926482_+\|enoyl-CoA-hydratase/isomerase-family-protein	unknown	unknown	gnl\|CDD\|235533
NC_020506.1\|WP_015650747.1\|924583_925384_-\|Cof-type-HAD-IIB-family-hydrolase	unknown	unknown	gnl\|CDD\|223635
NC_020506.1\|WP_015650736.1\|913180_913798_-\|cyclase-family-protein	unknown	unknown	gnl\|CDD\|224790
NC_020506.1\|WP_015650740.1\|916879_917818_+\|4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol-kinase	unknown	unknown	gnl\|CDD\|235110
NC_020506.1\|WP_015650741.1\|917850_919656_+\|ABC-F-family-ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|223562
NC_020506.1\|WP_015650739.1\|916012_916879_+\|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	unknown	unknown	gnl\|CDD\|234708
NC_020506.1\|WP_029703892.1\|907375_909160_+\|BCCT-family-transporter	unknown	unknown	gnl\|CDD\|376718
NC_020506.1\|WP_029703894.1\|922749_923082_+\|antibiotic-biosynthesis-monooxygenase	unknown	unknown	gnl\|CDD\|224278
NC_020506.1\|WP_015650752.1\|929986_930568_-\|TetR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|188483
NC_020506.1\|WP_015650735.1\|911142_913194_+\|ATP-dependent-DNA-helicase-RecQ	unknown	unknown	gnl\|CDD\|223588
NC_020506.1\|WP_015650746.1\|923607_924531_+\|polyphosphate-kinase-2	unknown	unknown	gnl\|CDD\|213852
NC_020506.1\|WP_015650753.1\|930551_932930_-\|MMPL-family-transporter	unknown	unknown	gnl\|CDD\|225272
NC_020506.1\|WP_029703897.1\|928555_929923_+\|esterase-family-protein	unknown	unknown	gnl\|CDD\|223700
NC_020506.1\|WP_015650750.1\|927223_928429_-\|hypothetical-protein	unknown	unknown	unknown
NC_020506.1\|WP_015650749.1\|926554_927277_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226657
NC_020506.1\|WP_015650738.1\|914824_915976_+\|resuscitation-promoting-factor	unknown	unknown	gnl\|CDD\|226111
NC_020506.1\|WP_015650734.1\|909210_911043_+\|methionine--tRNA-ligase	unknown	unknown	gnl\|CDD\|237029
NC_020506.1\|WP_015650737.1\|913819_914644_+\|TatD-family-hydrolase	unknown	unknown	gnl\|CDD\|238635

Protein	Function_ID	Function_description	E-value
NC_020506.1\|WP_015650745.1\|923157_923481_+\|antibiotic-biosynthesis-monooxygenase	gnl\|CDD\|224278	COG1359, COG1359, Uncharacterized conserved protein [Function unknown].	9.79319e-27
NC_020506.1\|WP_015650742.1\|919948_920545_+\|YdhK-family-protein	gnl\|CDD\|369427	pfam07563, DUF1541, Protein of unknown function (DUF1541). This family consists of several hypothetical bacterial and occurs as a tandem repeat.	6.2713e-22
NC_020506.1\|WP_015650748.1\|925465_926482_+\|enoyl-CoA-hydratase/isomerase-family-protein	gnl\|CDD\|235533	PRK05617, PRK05617, 3-hydroxyisobutyryl-CoA hydrolase; Provisional.	3.96996e-140
NC_020506.1\|WP_015650747.1\|924583_925384_-\|Cof-type-HAD-IIB-family-hydrolase	gnl\|CDD\|223635	COG0561, Cof, Predicted hydrolases of the HAD superfamily [General function prediction only].	2.45092e-60
NC_020506.1\|WP_015650736.1\|913180_913798_-\|cyclase-family-protein	gnl\|CDD\|224790	COG1878, COG1878, Kynurenine formamidase [Amino acid transport and metabolism].	7.69665e-57
NC_020506.1\|WP_015650740.1\|916879_917818_+\|4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol-kinase	gnl\|CDD\|235110	PRK03188, PRK03188, 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional.	6.40791e-128
NC_020506.1\|WP_015650741.1\|917850_919656_+\|ABC-F-family-ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|223562	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only].	2.86438e-167
NC_020506.1\|WP_015650739.1\|916012_916879_+\|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	gnl\|CDD\|234708	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA.	7.79819e-122
NC_020506.1\|WP_029703892.1\|907375_909160_+\|BCCT-family-transporter	gnl\|CDD\|376718	pfam02028, BCCT, BCCT, betaine/carnitine/choline family transporter.	0
NC_020506.1\|WP_029703894.1\|922749_923082_+\|antibiotic-biosynthesis-monooxygenase	gnl\|CDD\|224278	COG1359, COG1359, Uncharacterized conserved protein [Function unknown].	2.00475e-25
NC_020506.1\|WP_015650752.1\|929986_930568_-\|TetR-family-transcriptional-regulator	gnl\|CDD\|188483	TIGR03968, transcriptional_regulator_TetR_family, mycofactocin system transcriptional regulator. Members of this family are TetR family putative transcriptional regulators that occur in genome contexts near proteins of the mycofactocin system. These include the precursor peptide (TIGR03969), a radical SAM peptide maturase (TIGR03962), and a putative carrier protein (TIGR03967). [Regulatory functions, DNA interactions].	4.9956e-10
NC_020506.1\|WP_015650735.1\|911142_913194_+\|ATP-dependent-DNA-helicase-RecQ	gnl\|CDD\|223588	COG0514, RecQ, Superfamily II DNA helicase [DNA replication, recombination, and repair].	5.52916e-162
NC_020506.1\|WP_015650746.1\|923607_924531_+\|polyphosphate-kinase-2	gnl\|CDD\|213852	TIGR03707, PPK2_P_aer, polyphosphate kinase 2, PA0141 family. Members of this protein family are designated polyphosphate kinase 2 (PPK2) after the characterized protein in Pseudomonas aeruginosa. This family comprises one of three well-separated clades in the larger family described by pfam03976. PA0141 from this family has been shown capable of operating in reverse, with GDP preferred (over ADP) as a substrate, producing GTP (or ATP) by transfer of a phosphate residue from polyphosphate. Most species with a member of this family also encode a polyphosphate kinase 1 (PPK1). [Central intermediary metabolism, Phosphorus compounds].	3.30971e-153
NC_020506.1\|WP_015650753.1\|930551_932930_-\|MMPL-family-transporter	gnl\|CDD\|225272	COG2409, COG2409, Predicted drug exporters of the RND superfamily [General function prediction only].	2.15785e-126
NC_020506.1\|WP_029703897.1\|928555_929923_+\|esterase-family-protein	gnl\|CDD\|223700	COG0627, COG0627, Predicted esterase [General function prediction only].	1.63079e-65
NC_020506.1\|WP_015650749.1\|926554_927277_+\|hypothetical-protein	gnl\|CDD\|226657	COG4194, COG4194, Predicted membrane protein [General function prediction only].	2.39947e-58
NC_020506.1\|WP_015650738.1\|914824_915976_+\|resuscitation-promoting-factor	gnl\|CDD\|226111	COG3583, COG3583, Uncharacterized protein conserved in bacteria [Function unknown].	5.12897e-91
NC_020506.1\|WP_015650734.1\|909210_911043_+\|methionine--tRNA-ligase	gnl\|CDD\|237029	PRK12268, PRK12268, methionyl-tRNA synthetase; Reviewed.	0
NC_020506.1\|WP_015650737.1\|913819_914644_+\|TatD-family-hydrolase	gnl\|CDD\|238635	cd01310, TatD_DNAse, TatD like proteins; E.coli TatD is a cytoplasmic protein, shown to have magnesium dependent DNase activity.	1.94355e-93

>NC_020506.1|WP_015650742.1|919948_920545_+|YdhK-family-protein
MNYRTKTLLVALTATGTLVLSACSPADESSSATSSSSSSSSSSSSAAADPHSSMMHSMGNAEVPEGMTEATDPTYPVGTEVTLTADHMPGMEGATATVSGAYDTYTYAVDYVPTTGGATVLDHRWVVQEEIENAGTERLANGTKVTLTAGHMAGMDGAEATIASSTDETVYAVDFEMNGMTMENHMWVVESEMQPLSN
>NC_020506.1|WP_015650741.1|917850_919656_+|ABC-F-family-ATP-binding-cassette-domain-containing-protein
MANLINLENVSKTWGLKTLLDGVSLGVQSGDRIGVVGLNGGGKTTLLEVLTGIEPPDAGRVSHNSDLRMAVVTQRAELNDDDTVADVVLGPLGLEVFEWASNATVRDVLGGLGIVNLGLDTKVGNLSGGERRRTNLAAALVQDLDLIVLDEPTNHLDVEGVQWLASYLLSRRIAIVVVTHDRWFLDTIATTTWEVHDGVVDSYEGGYNDWTFARAERARQSDIIEQRRQNLARKELAWLRRGAPARTSKPRYRIEAAEALIADVPAPRDKVELMKFSKSRQGRVVIELEDAAIATPDDRMLVEDLTWRLAPGERIGLVGVNGSGKTTLLRTLAGEHPLRAGKRIEGQTVKLGWLRQELDDLDLSRRLIDCVEDVASYVVMGDKQISASQLAERLGFSPQRQRTPVGDLSGGERRRLQLTRVLMAEPNVLLLDEPTNDLDIDTLQELESLLDGWPGTLVVISHDRYLIERVTDSTWALFGDGKLTNLPGGIEEYLARRVVLMEASDTGVLNLGSANAVSESSSTSTMSSQERHRITKEMNALERKMGKLDQQMDKLNQQLAAAAEEMDTAKLTELDTKLRAVRDEHSDLEMQWMELGEEIEV
>NC_020506.1|WP_015650740.1|916879_917818_+|4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol-kinase
MKITAKAWAKTNLHLGVGEARPDGFHELLTVFQTIDLFDTVTLETIDEEIVETGSVVKRLSVTGPRGVPEDATNLAWRAVDALVARRAEQTPLPAVTLHIDKGIPVAGGMAGGSADAAATLRAVDAWIGPFGQETLLEVAAELGSDVPFCLLGGTMRGSGRGEQLVDMLNRGKYHWVVAVFAKGLSTPAVFKKHDEIHWHGNFEIEELSEALLQGDYLSVGSALHNDLQISAFSLRPELRTVLTDGIKAGAFTGIVSGSGPTLVFICENAADARDVAESLIDGGQVLAAHTATGPASRSARTRGAHILSIED
>NC_020506.1|WP_015650739.1|916012_916879_+|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA
MEEPSGAQLLGPVEIRALAEKLDVTPTKKLGQNFVHDPNTVRRIVGAAGLTAEDHVVEVGPGLGSLTLALVDVAKTVTAVEIDPRLAAELPATFQWRAPDLADKLSIVLKDALQVKQADLAVQPTALVANLPYNVSVPVLLHMMEEFPTITKVLVMVQAEVADRLAADPGSKIYGVPSVKASFYGPVTKAGSIGKNVFWPAPKIESGLVKITRVETPWQQDDETRKKVWPIIDAAFLQRRKTLRAALSGYFGSAQAAEDALRAANIDPGLRGEKLDIADYVRLGLQEA
>NC_020506.1|WP_015650738.1|914824_915976_+|resuscitation-promoting-factor
MATHQKSRINQINGTRSVPLRLATGGMLATLLIGGVTAATTKKDITVDVNGQQLALVTMSGTVEGALTQAGIELGDQDIVSPSLDSALTDNTKVTVRTAKQVAVVVEGETKQVTTTAASVEDLLNEIGGVTPADAVDADLNAEIPEDGLELNVTKSKIISINDGGKITYLSIAAKDVAEALQERGISLDADDRLNVDPATTLKNNTQIVIDRVENNHVTEAVPFDVAAVYVDNPDAPEGEESVLEPGAAGTKEITRQITTVNGVETNSAVVNEVEVTPATPAKISRGTKVAAAAPAAAAVAGNSVWDQLAQCEAGGNWAIDTGNGYSGGLQFAASTWQAYGGGAYSATAAGASREQQIAIAEKVQAAQGWGAWPACTASLGIR
>NC_020506.1|WP_015650737.1|913819_914644_+|TatD-family-hydrolase
MSKKKPRPIPVPAQFIPQLIDAHTHLASCGGDTAELLKRAHEAGVEKLCTVGDGLAEAELALQAAQEFNNVYAACAIHPTKADQLDAAARQRLSEMAQDPACVAIGETGLDTYWITHDPENTASLEVQEEALRWHIDLAVNSGKALMIHNREADADLMRVLGSAPRPENTILHCFSSPLGVAKEALERGYILSFAGNVTFKRNEELREAARIAPLEQIFIETDAPYMTPEPFRGSRNEPSLIGHTALCIAEVRGMAVEELAVALSANFDRVYHS
>NC_020506.1|WP_015650736.1|913180_913798_-|cyclase-family-protein
MQIIDLSHAFHPGQPHYPGDPDEEVDVVSEISQDGFLMHRYHLVGPWGTHVDAPAHFDPTGRTLDQIPVQETYLPIYRVSFPQESLITPAELTSFESQYGEIQTGSFVALHTGWTWGRTGIAPGWSINALEYLHLKGVIAIGHDLPDTDPTLEAQHWWLHHDHWQIENMCNLEKVPPLGAHLACPWPVPRSGASFPVRPIALIPD
>NC_020506.1|WP_015650735.1|911142_913194_+|ATP-dependent-DNA-helicase-RecQ
MNTTREEANTLLAGIAGPGAQLRDDQWLAIDALVNKKQRMLVVQRTGWGKSAVYFIAAKLLRARGAGAAVIISPLLALMRNQVAAAERAGIKAATLNSANMKQWEDIEKSVIGGDVDVLLISPERLNNPDFRSSILPRLAAETGLVVVDEAHCISDWGHDFRPDYRRIRDLLAGLGAQVPVLATTATANDRVVEDVRAQLGEGTGVLRGELDRDSLYLSVVNLEDSTLRAAWLATHLKELKGSGIIYCLTVSAAHDLADALKALGWEVAAYTGRTEAGERERLEQALLNNELKALIATSALGMGFDKPDLGFVVHLGSPSSPVSYYQQIGRAGRGTDHADVILLPGVEDKAIWEYFASVSFPAEEVVRQLLSVLTTEAQSTVKLESQVDLSRSRLEQVLKVLDVDGAVDRVRGGWVSTGQEWTYDAPRYAGLQEARHAEEVAMLEYQRSTSCRMLFLRQQLDDIHATVPCGRCDNCTGHKWSENIDSGINLQVEQQLKSPGVRLPARKMWPSGISVKGKISGIKEGRALGRLNDIGRGPALKQLLESGHFIEDPWMGRIIEVLKNWDWQQRPANVVALGKPDVQATALTVEVAQAIARIGRMNFAGLLNVAPGAVEVTAQNSAYRVEGLLNQWDWSAGLQLVDGPVLLVTDLFDTGWSVTVAGTGIAQRSSLDVLPFALASRG
>NC_020506.1|WP_015650734.1|909210_911043_+|methionine--tRNA-ligase
MTKNVLVSVAWPYANGPRHIGHVAGFGVPSDVFARFQRMSGNNVLMVSGTDEHGTPLLVQADKEGVSVQELADKYNRQIVEDLSGLGLSYDLFTRTTTSNHYAVVQELFRGLYDNGYMIKETTLGAISPSTGRTLPDRYIEGTCPICGADGARGDQCDNCGNQLDPSDLINPVSKINGETPNFVETEHFLLDLPALAEALTEWLKGREDWRPNVLKFSLNLLEDIRPRAMSRDIDWGIPIPVEGWQDNNAKKLYVWFDAVVGYLSASIEWAYRNGDPEAWRTFWNDPETKSYYFMGKDNITFHSQIWPAELLGYAGLGSRGGEVGDLGVLNLPTEVVSSEFLTMSGSKFSSSKGVVIYVKDFLKEFGADPLRYFIAVAGPENNDTDFTWDEFVRRVNNELANGWGNLVNRTVSMAHKNFGEVPVPGALEEADQKILDLATATFESVAANLEQSKFKAGITEVMHVVGEANAYIADQEPWKLAKDDTQRERLATVLWTALQVVSDCNTMLTPYLPHTAQKVHETLGRDGIWAASPQIVEVKNDSPRLPIGVGLPDPEHTYPVIMGDYKTQLARWERIDVVPGTHLEKPAPLIAKLDPELGETGPEWAPVQK
>NC_020506.1|WP_029703892.1|907375_909160_+|BCCT-family-transporter
MTTSDPNSKPIVEDAHSEQVTATEELAGLLKNPDVGEQLADFEEEIVFESESETASLDWTVIIPALAVVLATVVWGIGFNESFSKVAGSALGFVVNNLGWAFVLFGTVFVFFAIAIAASKFGQIRLGRIDEAPEFRTVSWISMMFAAGMGIGLMFYGTSEPLTFYRNGVPGHQTHEVGTAMASTMFHWTLHPWAIYAIVGLAIAYSTYRVGRKQLLSSAFVPLIGEKGAEGWPGKLIDILAIIATVFGTACSLGLGAMQIGAGLSAAGIIESPSQWTVLGIVSILTLAFLISAVSGVGKGIQYLSNANMILAALLAIFVFVVGPTISVLNLIPGSLGNYLSSFFEMAGRTAMSADGTAGEWLSSWTIFYWAWWISWSPFVGMFLARISRGRSIREFIVGVMLVPAGVSTVWFSIFGGTAIVFEQDSKSIWGEGSAQEQLFALLHSLPGGQIAGIIAMVLLGTFFITSADSASTVMGTMSQRGSLEPNKGVTAAWGIATAAIGLTLLLSGGDDALNNLQNVTIVAATPFLFVIVGLMFALVKDLSNDIIYVDYREQMKFNARLARERRVHNEHLKRELAAKRRRERQAQRVLKHR
>NC_020506.1|WP_029703894.1|922749_923082_+|antibiotic-biosynthesis-monooxygenase
MGEMILINVKFKPLPEYVANFRELVAEFTEKTRAEEGNIFFEWSINTDNPNEFVLIEAFQDDAAEAHVNSDHFKAACELFPTILIETPEIINTLIEGKTEWDRMAEFAVK
>NC_020506.1|WP_015650745.1|923157_923481_+|antibiotic-biosynthesis-monooxygenase
MHIVNIRFKPKAKYVETFRYTVDKFTEETRTEEGCLYFDWFRNTDYPGEYLVVGVWTDEGAKAHQNSEQYLRAQETLPPLLQQTPLIVQSEFPHKKGWERFSDFEVN
>NC_020506.1|WP_015650746.1|923607_924531_+|polyphosphate-kinase-2
MGNKKDSESLPDFHKNPPKLDKKAYEKELKRLQAELVNLQQWVVETGARVVIVMEGRDAAGKGSAIKRITQYLNPRSARIEALPTPSSREKGQWYFQRYIEKLPTAGEIVIFDRSWYNRAGVERVMGFCTSQEYRRFLHQAPIFERLLVEDGIHLRKYWFSVSDEEQISRFQDRLSDPLRRWKLSPMDLQSITKWEDYSRAKDEMFIHTDIPSAPWYTVESEDKKRSRINVISHLLSTIPYEKIDRPLPEIPERPNPDTDYERPPRDEFRYVPDVAAHLEEDRIEAVKQEKKDKKASKKEKKGKKKA
>NC_020506.1|WP_015650747.1|924583_925384_-|Cof-type-HAD-IIB-family-hydrolase
MDFRLVATDMDGTLLNDQRRIPEGFWKVLEQLREQDIAFAPASGRQLATLQTQFERAGEPLSYIAENGTVVVHNGEIISLTTIDGETVHSIIDAARESSVDMGVVVCRPERAFVERFDAAFREEGSQYYLALDEVEDLHEVVNDEVIKVAIFTFADAEKDCAPVIRAAAPGANVVVSGEHWVDVMDKSANKGHALATLREALGIAESETLVFGDYLNDTELMKAAGTSYAMANAHPDILALADEIAPSNAEAGVVVVLQNLLSEEL
>NC_020506.1|WP_015650748.1|925465_926482_+|enoyl-CoA-hydratase/isomerase-family-protein
MNISEPPVIIRVQHKTGIVALNRAKALNSINLEMVNIIQQALDEWAADDAISQVLIYSTSERAFCAGGDIRELRDAVIAGNPEFGDHYFTEEFNLVNCLGTYPKPVIALINGIVMGGGMGVSMHNSHRIITENALAAMPETAIGYVPDVGFTYFAHQITTPAIAKFLGITGWRMSPADMLWTGVASHFIKSADIEAFTNTLLENSLEQALDTFSTQPEESSTLESFASSIEETFGQETGELIDAALAAHPDAAFRAKIEKPLRQAAPSAVVATSALMNQNREAQSLREGLDNELVMALFMIRQPDFAEGVRAAVVDKDRNPQFGAALPEENYLELIKN
>NC_020506.1|WP_015650749.1|926554_927277_+|hypothetical-protein
MKALSKIPVPWTWYLGIMGMIVMSIVAALAMLKYFPNEMPTQVNSGLFALGGSYSPPMSSQTLIARVVAGAVLVLAISLGTSTLISYRSENLAADHPHASAIQLARRWSFLNNVQSCLGWFSFFLAAVLTISALRVNGPGPVSAFEMAAYVVSIAVLAWVFVISLRRGQLEIDRAIPIREDDSALKWGIIYHNVSDPRVFIELDDGQTTVINMARPASWGLLGLMILPAVVIVGIIIYGS
>NC_020506.1|WP_015650750.1|927223_928429_-|hypothetical-protein
MDIPLPVSLSEVVADGKIGQSGVDQAFAAQLGGILGVEFNLDEGATHAEVRINRTSGAPFDTTGEVVAWIQNNQLTWESTRGVDLNIPELQGTQPLSDNLISAARTLYGNAPAFIAPFGSRGQALVIINYLPELFDARRDLIDGLPGLPRGTLRRALSSYAAFRGLGIRIEEDRIAFSDGTSLLLRNGKPIELAGGLGLREVRADAAFMSAEHQLLFDAISPNYQLQFNASSRTAQLDNVHEVQAFPLATIEGNTWKWAWSQPEFHGSETEGVARFGFDNGILLLTTPEVEVADAQEFELINVAKPILKRWTHAFVKDGDRHIVILLDHPRLHLPPASFAAVEATLYQPLASDLDRQRAVASYAQLRGLPFDGSKITVENRQLNLASINNDSDNDHSGQDH
>NC_020506.1|WP_029703897.1|928555_929923_+|esterase-family-protein
MKTAKSRLCSIVLGVSIGVTSVFTGAGIAAAYDYGMDPNQNYNPVEDITDRPEGLSKLPFFGSQLTSFGSSEGSSFGEIVTSTEPQYTDPRYPAGKDALPKATIDMNPEVLARLERFIGVDGDRIRQINAYSPSMGRTIPLLWIVPEDNSVPRPTLYALGGGDGGQGSDNWVNNTDLDELMSQNNVNVIMPMLGAYTFYADWVEESADLGGKQQWETFLTHELPEPLEAAIGADGQRSIIGMSMSGGTVLNYASHNPNFYSSVGSFSGCAETNSWMGRRGIAATAYNGNALPSQIFGEVDSDYSRYNDPLLNAAKLGEQDNLYVFSASGLSSELDFTGPNAPTDQAGIDDRLSVGFQIEAMSNTCTHNLKAATDQMGIKSINYDFGVTGTHSWDYWNQGLHRFFPLMMQGFGLDGGEIPVYNPNGVSSTESSSELSSGVSLGGVIGSVVGSSLSS
>NC_020506.1|WP_015650752.1|929986_930568_-|TetR-family-transcriptional-regulator
MSGLRETKKAATRTALSRAAAQLALTEGPESLTVATIAAEAGFSTRTFHNYFASREEALVEFMSSQIQNLIAQLEELPADLDTQDALEHLVINHFRKGDSELDSFSALYQVGEILEKLGPPPCAFDANIMLEPLRLFFKHKMPQLDDFEIDVSIHLQAAAIAAALKWYYRNPEPRDPEEAIELVKRASALLKR
>NC_020506.1|WP_015650753.1|930551_932930_-|MMPL-family-transporter
MARFLYNIGSLAYRKKWPFLAFWLILLIGITTLAGLYSKPTTSSFSIPGLDSVTTMEKMQERFPGSSDATSAATGSVVIQAPEGSTLTDPAVSAEVNKMLEEIRATGVLKDAESVVDPVMAAQGITAQMTPALEAQGVPADKIAADIASISPLSPDETTGIVSMTFDAAAAADVPAADRTAVTDILDKYDDGDLTVVYNGNVFGAAATSLNMTSELIGLLVAAVVLIVTFGSFIAAGMPLISAIIGVGIGIMGIQLATAFTDSVSDMTPTLASMIGLAVGIDYALFIVSRFRNELIGQTGSNNLEPKELAQKLRNMPLSTRAHAMGMAVGTAGSAVVFAGTTVLIALIALSIINIPFLTTMAIAAAITVAVAVLVALTFLPALLGLLGTKIFAARMPGPKVPDPEDEKPTMGLKWVRLIRKMPLAYLAVGVILLGAIAIPAGNMRLAMPTDGTSALGSAPRTAYDMTAEAFGPGKNAPMIALIDAANVAEQDRPQAFAKAVEQFLTIDGVKNAQVTQTTENLDTAQILITPEFDAIDERTSDTLQALRDNTSTFESETGATYGITGVTPIYDDISERLSSVLIPYVLIVLVLAFFVLLLVFRSIWVPLIAALGFGLSVAATFGATVAIFQEGAFGIIEDPQPLLSFLPIMLIGLVFGLAMDYQIFLVTRMREGFTKGKTAGNATSNGFKHGARVVTAAAIIMVSVFAAFMAQDMAFIKTMGFALAAAVFFDAFIVRMMIIPATMFLLDDKAWWLPKWLDKILPNVDVEGEGLSGLDKARTAELKESTSVGAS

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NC_020506_2	2.1\|920627\|23\|NC_020506\|CRISPRCasFinder	920627-920649	23	CP022016	Salmonella enterica subsp. enterica serovar India str. SA20085604 plasmid unnamed1, complete sequence	379239-379261	2	0.913
NC_020506_2	2.1\|920627\|23\|NC_020506\|CRISPRCasFinder	920627-920649	23	NZ_CP027853	Plesiomonas shigelloides strain MS-17-188 plasmid pPS-MS-17-188-1, complete sequence	315376-315398	3	0.87
NC_020506_2	2.2\|920681\|23\|NC_020506\|CRISPRCasFinder	920681-920703	23	NZ_CP007792	Corynebacterium marinum DSM 44953 plasmid pCmarinum1, complete sequence	38969-38991	3	0.87

1. spacer 2.1|920627|23|NC_020506|CRISPRCasFinder matches to CP022016 (Salmonella enterica subsp. enterica serovar India str. SA20085604 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.913

gaggtcatgctgggcatggtggt	CRISPR spacer
gcggtcattctgggcatggtggt	Protospacer
* ****** **************

2. spacer 2.1|920627|23|NC_020506|CRISPRCasFinder matches to NZ_CP027853 (Plesiomonas shigelloides strain MS-17-188 plasmid pPS-MS-17-188-1, complete sequence) position: , mismatch: 3, identity: 0.87

gaggtcatgctgggcatggtggt	CRISPR spacer
atggtcatgctgggcatggtgct	Protospacer
. ******************* *

3. spacer 2.2|920681|23|NC_020506|CRISPRCasFinder matches to NZ_CP007792 (Corynebacterium marinum DSM 44953 plasmid pCmarinum1, complete sequence) position: , mismatch: 3, identity: 0.87

ctgggcacgacgaacacggaggt	CRISPR spacer
ttggacacgacgaacacggagga	Protospacer
.***.*****************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

106899 : 131637

Mycobacterium_phage(33.33%)

integrase,transposase

attL 106170:106185|attR 109086:109101

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
106170:106185	attL	NA	NA	NA	NA
WP_015650011.1\|106899_107217_+\|transposase	transposase	A0A2P1JR43	Mycobacterium_phage	4.2e-11	42.6
WP_015652336.1\|107275_107740_+\|transposase	IS3 family transposase	A0A0N7C035	Escherichia_phage	1.5e-12	44.3
WP_081602444.1\|107663_108137_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	Q8W6R2	Burkholderia_virus	8.1e-35	55.6
WP_015650010.1\|108883_109150_-	hypothetical protein	NA	NA	NA	NA
109086:109101	attR	NA	NA	NA	NA
WP_015650014.1\|114883_116365_-	MFS transporter	NA	NA	NA	NA
WP_015650015.1\|116517_117765_-	amidohydrolase family protein	NA	NA	NA	NA
WP_015650016.1\|117874_118468_-	hypothetical protein	NA	NA	NA	NA
WP_015650017.1\|118555_119071_-	hypothetical protein	NA	NA	NA	NA
WP_029703768.1\|119201_120128_+	NAD-dependent protein deacetylase	S5M4R0	Bacillus_phage	8.5e-12	24.5
WP_015650019.1\|120124_121120_-	triacylglycerol lipase	NA	NA	NA	NA
WP_029703766.1\|121138_122041_-	triacylglycerol lipase	NA	NA	NA	NA
WP_015650021.1\|122124_122634_-	MarR family transcriptional regulator	NA	NA	NA	NA
WP_015650022.1\|122720_124169_+	AMP nucleosidase	NA	NA	NA	NA
WP_029703763.1\|124440_125889_+	aldehyde dehydrogenase	NA	NA	NA	NA
WP_081602446.1\|126100_126559_-	MFS transporter	NA	NA	NA	NA
WP_169330529.1\|126724_128122_-\|transposase	IS1380 family transposase	A0A222ZN33	Mycobacterium_phage	7.6e-113	49.8
WP_029703949.1\|128186_128672_-\|transposase	transposase	NA	NA	NA	NA
WP_015650027.1\|128724_129816_-	hypothetical protein	NA	NA	NA	NA
WP_155861981.1\|130437_131637_+\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	2.5e-32	35.0

DBSCAN-SWA_2

1531194 : 1555380

Gordonia_phage(25.0%)

tail,capsid

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_015651301.1\|1531194_1531614_-	DUF2744 domain-containing protein	G8I4D2	Mycobacterium_phage	9.5e-11	36.5
WP_015651302.1\|1531610_1533260_-	hypothetical protein	A0A220NQQ5	Corynebacterium_phage	1.7e-188	54.6
WP_155862003.1\|1533256_1534114_-\|tail	phage tail protein	A0A220NQR1	Corynebacterium_phage	1.3e-59	42.8
WP_015651304.1\|1534123_1538719_-	tape measure domain-containing protein	D4P802	Rhodococcus_phage	6.9e-62	41.7
WP_015651305.1\|1538795_1539080_-	hypothetical protein	NA	NA	NA	NA
WP_015651306.1\|1539184_1539658_-	hypothetical protein	NA	NA	NA	NA
WP_015651307.1\|1539838_1540441_-	hypothetical protein	A0A2H4JC28	uncultured_Caudovirales_phage	3.8e-53	53.9
WP_015651308.1\|1540487_1540850_-	hypothetical protein	NA	NA	NA	NA
WP_015651310.1\|1541057_1541264_-	hypothetical protein	NA	NA	NA	NA
WP_035107821.1\|1541260_1541632_-	hypothetical protein	A0A2H4J5S1	uncultured_Caudovirales_phage	5.1e-16	56.4
WP_015651313.1\|1541949_1542159_-	hypothetical protein	NA	NA	NA	NA
WP_015651314.1\|1542160_1543189_-\|capsid	major capsid protein	A0A166XYQ6	Gordonia_phage	1.4e-63	39.3
WP_015651315.1\|1543191_1543563_-	hypothetical protein	A0A2P1A0L4	Gordonia_phage	2.4e-18	44.4
WP_155862004.1\|1543563_1544175_-	hypothetical protein	NA	NA	NA	NA
WP_015651317.1\|1544266_1545073_-	hypothetical protein	A0A0K1LTS8	Mycobacterium_phage	1.1e-15	28.8
WP_015651318.1\|1545075_1546692_-	hypothetical protein	A0A161HSN6	Gordonia_phage	2.7e-61	35.6
WP_015651319.1\|1546688_1548305_-	hypothetical protein	A0A142KBT9	Gordonia_phage	9.9e-141	49.4
WP_015651320.1\|1548328_1548814_-	hypothetical protein	A0A2P1CID7	Actinomyces_phage	9.2e-34	58.8
WP_015651321.1\|1549020_1549314_-	HNH endonuclease	A0A1S6L2F2	Mycobacterium_phage	1.5e-10	40.0
WP_015651322.1\|1549368_1549791_+	hypothetical protein	NA	NA	NA	NA
WP_015651323.1\|1550185_1550794_-	hypothetical protein	NA	NA	NA	NA
WP_155861938.1\|1550793_1550946_-	hypothetical protein	NA	NA	NA	NA
WP_029703367.1\|1550942_1552301_-	DEAD/DEAH box helicase	A0A1L6BZE2	Pasteurella_phage	6.6e-162	61.7
WP_015651325.1\|1552281_1552563_-	VRR-NUC domain-containing protein	A0A2K5B272	Erysipelothrix_phage	2.4e-18	53.3
WP_015651326.1\|1552857_1555380_-	virulence-associated E family protein	A0A1L6BZE6	Pasteurella_phage	4.5e-265	55.1

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NC_020553

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

15463 : 23774

Streptococcus_phage(16.67%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003860207.1\|15463_17551_+	heavy metal translocating P-type ATPase	E4ZFI9	Streptococcus_phage	2.7e-114	39.5
WP_015453112.1\|17839_18931_+\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_003860198.1\|19358_19679_-\|transposase	transposase	Q8W6R2	Burkholderia_virus	3.0e-17	51.7
WP_003860196.1\|19665_20313_-\|transposase	IS3 family transposase	A0A2P1JR32	Mycobacterium_phage	2.3e-24	37.3
WP_003860195.1\|20366_21518_-\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	1.1e-37	35.0
WP_003860194.1\|21607_21805_-\|transposase	transposase	A0A1B3AZF8	Gordonia_phage	1.5e-06	41.5
WP_015453113.1\|22091_23774_-	ATP-dependent helicase	S5M596	Bacillus_phage	7.7e-19	24.8

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NC_020506

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NC_020553

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection