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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NC_020546 Bifidobacterium thermophilum RBL67, complete sequence 29 crisprs cas3,cas5,cas8c,cas7,cas4,cas1,cas2,DEDDh,WYL 0 23 0 0

Results visualization

1. NC_020546
NC_020546 0400000800000120000016000002000000 CRISPR 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 Self-targeting Prophage anti-CRISPR
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_020546_1 12159-12340 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_020546_2 62310-62476 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_020546_3 103446-103693 Orphan NA
3 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_020546_4 146036-146151 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_020546_5 148603-148844 Orphan NA
3 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_020546_6 181625-182087 Orphan NA
6 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_020546_7 239711-240324 Orphan NA
8 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_020546_8 329020-329347 Orphan NA
4 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_020546_9 520772-520846 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_020546_10 526909-527152 Orphan NA
3 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_020546_11 561140-561231 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_020546_12 663783-664103 Orphan NA
4 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_020546_13 796539-803259 TypeI NA
100 spacers
DEDDh,cas3,cas5,cas8c,cas7,cas4,cas1,cas2

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_020546_14 818497-818668 TypeI NA
2 spacers
cas2,cas1,cas4,cas7,cas8c,cas5,cas3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_020546_15 1015876-1016062 Unclear NA
2 spacers
cas3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_020546_16 1391182-1391288 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_020546_17 1503696-1503800 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_020546_18 1563757-1564075 Orphan NA
4 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_020546_19 1564192-1564517 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_020546_21 1570646-1570741 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_020546_22 1570889-1570984 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_020546_20 1570415-1570584 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_020546_23 1576074-1576608 Orphan NA
7 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_020546_24 1810491-1810565 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_020546_25 1872037-1872349 Orphan NA
4 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_020546_26 1922105-1922346 Orphan NA
3 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_020546_27 1934817-1935054 Orphan NA
3 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_020546_28 2189826-2190070 Orphan NA
3 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_020546_29 2252558-2252804 Orphan NA
3 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NC_020546_13 13.92|801920|33|NC_020546|CRISPRCasFinder,CRT,PILER-CR 801920-801952 33 MH444512 Bifidobacterium phage Willi, complete genome 8254-8286 2 0.939
NC_020546_13 13.92|801920|33|NC_020546|CRISPRCasFinder,CRT,PILER-CR 801920-801952 33 MK932884 Bifidobacterium phage PMBT6, complete genome 8254-8286 2 0.939
NC_020546_13 13.93|801986|33|NC_020546|CRISPRCasFinder,CRT 801986-802018 33 NZ_CP046575 Rhodococcus sp. WAY2 plasmid pRWAY03, complete sequence 261959-261991 6 0.818
NC_020546_24 24.1|1810514|29|NC_020546|CRISPRCasFinder 1810514-1810542 29 NZ_CP051472 Rhodobacter sphaeroides strain CH10 plasmid pRspCH10C, complete sequence 48872-48900 6 0.793
NC_020546_24 24.1|1810514|29|NC_020546|CRISPRCasFinder 1810514-1810542 29 NZ_CP012965 Rhodobacter sphaeroides strain MBTLJ-8 plasmid unnamed, complete sequence 48316-48344 6 0.793
NC_020546_24 24.1|1810514|29|NC_020546|CRISPRCasFinder 1810514-1810542 29 CP047035 Rhodobacter sphaeroides strain DSM 158 plasmid pC, complete sequence 48436-48464 6 0.793
NC_020546_24 24.1|1810514|29|NC_020546|CRISPRCasFinder 1810514-1810542 29 NZ_CP047041 Rhodobacter sphaeroides strain 2.4.1 substr. H2 plasmid pC, complete sequence 48402-48430 6 0.793
NC_020546_24 24.1|1810514|29|NC_020546|CRISPRCasFinder 1810514-1810542 29 NZ_CP015214 Rhodobacter sphaeroides strain MBTLJ-13 plasmid c, complete sequence 63649-63677 6 0.793
NC_020546_24 24.1|1810514|29|NC_020546|CRISPRCasFinder 1810514-1810542 29 NZ_CP030275 Rhodobacter sphaeroides 2.4.1 plasmid pC, complete sequence 31607-31635 6 0.793
NC_020546_24 24.1|1810514|29|NC_020546|CRISPRCasFinder 1810514-1810542 29 NZ_CP015292 Rhodobacter sphaeroides strain MBTLJ-20 plasmid d, complete sequence 83037-83065 6 0.793
NC_020546_13 13.16|797581|33|NC_020546|PILER-CR 797581-797613 33 NC_047872 Listeria phage LMTA-94, complete genome 135868-135900 7 0.788
NC_020546_13 13.16|797581|33|NC_020546|PILER-CR 797581-797613 33 KJ591605 Listeria phage LMTA-57, complete genome 9767-9799 7 0.788
NC_020546_13 13.16|797581|33|NC_020546|PILER-CR 797581-797613 33 NC_042048 Listeria phage LMTA-34, complete genome 11658-11690 7 0.788
NC_020546_13 13.16|797581|33|NC_020546|PILER-CR 797581-797613 33 NC_024360 Listeria phage LMSP-25, complete genome 11658-11690 7 0.788
NC_020546_13 13.16|797581|33|NC_020546|PILER-CR 797581-797613 33 MN172529 Listeria phage LP-039, complete genome 2073-2105 7 0.788
NC_020546_13 13.16|797581|33|NC_020546|PILER-CR 797581-797613 33 MN172529 Listeria phage LP-039, complete genome 135099-135131 7 0.788
NC_020546_13 13.16|797581|33|NC_020546|PILER-CR 797581-797613 33 KJ591604 Listeria phage LMTA-148, complete genome 11011-11043 7 0.788
NC_020546_13 13.16|797581|33|NC_020546|PILER-CR 797581-797613 33 KJ094033 Listeria phage LP-048, complete genome 4527-4559 7 0.788
NC_020546_13 13.27|797576|33|NC_020546|CRISPRCasFinder,CRT 797576-797608 33 NC_047872 Listeria phage LMTA-94, complete genome 135868-135900 7 0.788
NC_020546_13 13.27|797576|33|NC_020546|CRISPRCasFinder,CRT 797576-797608 33 KJ591605 Listeria phage LMTA-57, complete genome 9767-9799 7 0.788
NC_020546_13 13.27|797576|33|NC_020546|CRISPRCasFinder,CRT 797576-797608 33 NC_042048 Listeria phage LMTA-34, complete genome 11658-11690 7 0.788
NC_020546_13 13.27|797576|33|NC_020546|CRISPRCasFinder,CRT 797576-797608 33 NC_024360 Listeria phage LMSP-25, complete genome 11658-11690 7 0.788
NC_020546_13 13.27|797576|33|NC_020546|CRISPRCasFinder,CRT 797576-797608 33 MN172529 Listeria phage LP-039, complete genome 2073-2105 7 0.788
NC_020546_13 13.27|797576|33|NC_020546|CRISPRCasFinder,CRT 797576-797608 33 MN172529 Listeria phage LP-039, complete genome 135099-135131 7 0.788
NC_020546_13 13.27|797576|33|NC_020546|CRISPRCasFinder,CRT 797576-797608 33 KJ591604 Listeria phage LMTA-148, complete genome 11011-11043 7 0.788
NC_020546_13 13.27|797576|33|NC_020546|CRISPRCasFinder,CRT 797576-797608 33 KJ094033 Listeria phage LP-048, complete genome 4527-4559 7 0.788
NC_020546_13 13.42|798572|33|NC_020546|CRISPRCasFinder,CRT,PILER-CR 798572-798604 33 NC_010070 Burkholderia multivorans ATCC 17616 plasmid pBMUL01, complete sequence 771-803 7 0.788
NC_020546_13 13.42|798572|33|NC_020546|CRISPRCasFinder,CRT,PILER-CR 798572-798604 33 NZ_CP013369 Burkholderia ubonensis strain RF23-BP41 plasmid pRF23, complete sequence 151622-151654 7 0.788
NC_020546_13 13.42|798572|33|NC_020546|CRISPRCasFinder,CRT,PILER-CR 798572-798604 33 NZ_CP028965 Burkholderia sp. IDO3 plasmid p1, complete sequence 196813-196845 7 0.788
NC_020546_13 13.42|798572|33|NC_020546|CRISPRCasFinder,CRT,PILER-CR 798572-798604 33 NC_010802 Burkholderia multivorans ATCC 17616 plasmid pTGL1, complete sequence 112683-112715 7 0.788
NC_020546_13 13.103|802663|33|NC_020546|CRT,PILER-CR,CRISPRCasFinder 802663-802695 33 NC_002679 Mesorhizobium japonicum MAFF 303099 plasmid pMLa, complete sequence 9668-9700 7 0.788
NC_020546_13 13.111|803196|31|NC_020546|CRT 803196-803226 31 NZ_CP015205 Rhodococcus sp. 008 plasmid pR8C2, complete sequence 6446-6476 7 0.774
NC_020546_13 13.111|803196|31|NC_020546|CRT 803196-803226 31 NZ_CP025960 Rhodococcus qingshengii strain djl-6-2 plasmid pDJL1, complete sequence 49786-49816 7 0.774
NC_020546_13 13.111|803196|31|NC_020546|CRT 803196-803226 31 NZ_CP007256 Rhodococcus erythropolis R138 plasmid pCRE138, complete sequence 39296-39326 7 0.774
NC_020546_24 24.1|1810514|29|NC_020546|CRISPRCasFinder 1810514-1810542 29 NZ_CP023549 Rhodobacter sp. CZR27 plasmid unnamed1, complete sequence 413150-413178 7 0.759
NC_020546_24 24.1|1810514|29|NC_020546|CRISPRCasFinder 1810514-1810542 29 NZ_CP023549 Rhodobacter sp. CZR27 plasmid unnamed1, complete sequence 415366-415394 7 0.759
NC_020546_24 24.1|1810514|29|NC_020546|CRISPRCasFinder 1810514-1810542 29 NZ_CP023550 Rhodobacter sp. CZR27 plasmid unnamed2, complete sequence 39592-39620 7 0.759
NC_020546_9 9.1|520795|29|NC_020546|CRISPRCasFinder 520795-520823 29 NZ_CP018172 Mesorhizobium oceanicum strain B7 plasmid unnamed1, complete sequence 126493-126521 8 0.724
NC_020546_13 13.16|797581|33|NC_020546|PILER-CR 797581-797613 33 MK360024 Enterococcus phage vB_EfaS_Max, complete genome 38845-38877 8 0.758
NC_020546_13 13.16|797581|33|NC_020546|PILER-CR 797581-797613 33 NC_042101 Enterococcus phage PMBT2, complete genome 38451-38483 8 0.758
NC_020546_13 13.16|797581|33|NC_020546|PILER-CR 797581-797613 33 MK982307 Enterococcus phage MSF2, complete genome 3256-3288 8 0.758
NC_020546_13 13.16|797581|33|NC_020546|PILER-CR 797581-797613 33 MK721186 Enterococcus phage vB_EfaS_Ef5.2, complete genome 39298-39330 8 0.758
NC_020546_13 13.16|797581|33|NC_020546|PILER-CR 797581-797613 33 NC_042021 Enterococcus phage phiSHEF2, complete genome 39494-39526 8 0.758
NC_020546_13 13.16|797581|33|NC_020546|PILER-CR 797581-797613 33 NZ_CP040830 Paenibacillus polymyxa strain ZF129 plasmid pAP1, complete sequence 72003-72035 8 0.758
NC_020546_13 13.27|797576|33|NC_020546|CRISPRCasFinder,CRT 797576-797608 33 MK360024 Enterococcus phage vB_EfaS_Max, complete genome 38845-38877 8 0.758
NC_020546_13 13.27|797576|33|NC_020546|CRISPRCasFinder,CRT 797576-797608 33 NC_042101 Enterococcus phage PMBT2, complete genome 38451-38483 8 0.758
NC_020546_13 13.27|797576|33|NC_020546|CRISPRCasFinder,CRT 797576-797608 33 MK982307 Enterococcus phage MSF2, complete genome 3256-3288 8 0.758
NC_020546_13 13.27|797576|33|NC_020546|CRISPRCasFinder,CRT 797576-797608 33 MK721186 Enterococcus phage vB_EfaS_Ef5.2, complete genome 39298-39330 8 0.758
NC_020546_13 13.27|797576|33|NC_020546|CRISPRCasFinder,CRT 797576-797608 33 NC_042021 Enterococcus phage phiSHEF2, complete genome 39494-39526 8 0.758
NC_020546_13 13.27|797576|33|NC_020546|CRISPRCasFinder,CRT 797576-797608 33 NZ_CP040830 Paenibacillus polymyxa strain ZF129 plasmid pAP1, complete sequence 72003-72035 8 0.758
NC_020546_13 13.33|797974|33|NC_020546|CRISPRCasFinder,CRT 797974-798006 33 JX100810 Caulobacter phage CcrColossus, complete genome 832-864 8 0.758
NC_020546_13 13.44|798706|34|NC_020546|CRISPRCasFinder,CRT,PILER-CR 798706-798739 34 NC_021056 Streptomyces sp. PAMC 26508 plasmid pSP01, complete sequence 56379-56412 8 0.765
NC_020546_13 13.44|798706|34|NC_020546|CRISPRCasFinder,CRT,PILER-CR 798706-798739 34 NC_016110 Streptomyces pratensis ATCC 33331 plasmid pSFLA01, complete sequence 57906-57939 8 0.765
NC_020546_13 13.104|802729|34|NC_020546|CRT,PILER-CR,CRISPRCasFinder 802729-802762 34 NZ_CP049158 Caballeronia sp. SBC1 plasmid pSBC1_2, complete sequence 993963-993996 8 0.765
NC_020546_13 13.104|802729|34|NC_020546|CRT,PILER-CR,CRISPRCasFinder 802729-802762 34 NZ_CP049318 Caballeronia sp. SBC2 plasmid pSBC2-2, complete sequence 998643-998676 8 0.765
NC_020546_13 13.104|802729|34|NC_020546|CRT,PILER-CR,CRISPRCasFinder 802729-802762 34 KP027201 Mycobacterium phage Sbash, complete genome 40672-40705 8 0.765
NC_020546_13 13.111|803196|31|NC_020546|CRT 803196-803226 31 NZ_CP010871 Confluentimicrobium sp. EMB200-NS6 strain EMBL200_NS6 plasmid pNS6002, complete sequence 31794-31824 8 0.742
NC_020546_13 13.111|803196|31|NC_020546|CRT 803196-803226 31 NZ_CP017300 Rhodococcus sp. YL-1 plasmid pYLC1, complete sequence 390093-390123 8 0.742
NC_020546_13 13.16|797581|33|NC_020546|PILER-CR 797581-797613 33 NC_047872 Listeria phage LMTA-94, complete genome 5445-5477 9 0.727
NC_020546_13 13.16|797581|33|NC_020546|PILER-CR 797581-797613 33 KJ591605 Listeria phage LMTA-57, complete genome 15826-15858 9 0.727
NC_020546_13 13.16|797581|33|NC_020546|PILER-CR 797581-797613 33 NC_042048 Listeria phage LMTA-34, complete genome 5613-5645 9 0.727
NC_020546_13 13.16|797581|33|NC_020546|PILER-CR 797581-797613 33 NC_024360 Listeria phage LMSP-25, complete genome 5613-5645 9 0.727
NC_020546_13 13.16|797581|33|NC_020546|PILER-CR 797581-797613 33 KJ535721 Listeria phage List-36, complete genome 203-235 9 0.727
NC_020546_13 13.27|797576|33|NC_020546|CRISPRCasFinder,CRT 797576-797608 33 NC_047872 Listeria phage LMTA-94, complete genome 5445-5477 9 0.727
NC_020546_13 13.27|797576|33|NC_020546|CRISPRCasFinder,CRT 797576-797608 33 KJ591605 Listeria phage LMTA-57, complete genome 15826-15858 9 0.727
NC_020546_13 13.27|797576|33|NC_020546|CRISPRCasFinder,CRT 797576-797608 33 NC_042048 Listeria phage LMTA-34, complete genome 5613-5645 9 0.727
NC_020546_13 13.27|797576|33|NC_020546|CRISPRCasFinder,CRT 797576-797608 33 NC_024360 Listeria phage LMSP-25, complete genome 5613-5645 9 0.727
NC_020546_13 13.27|797576|33|NC_020546|CRISPRCasFinder,CRT 797576-797608 33 KJ535721 Listeria phage List-36, complete genome 203-235 9 0.727
NC_020546_13 13.48|798971|34|NC_020546|CRISPRCasFinder,CRT,PILER-CR 798971-799004 34 NZ_CP030205 Salmonella enterica strain SA20083530 plasmid pSA20083530.2, complete sequence 25958-25991 9 0.735
NC_020546_13 13.75|800781|34|NC_020546|CRISPRCasFinder,CRT,PILER-CR 800781-800814 34 NZ_CP020909 Rhizobium etli strain NXC12 plasmid pRetNXC12c, complete sequence 167729-167762 9 0.735
NC_020546_13 13.76|800848|33|NC_020546|CRISPRCasFinder,CRT,PILER-CR 800848-800880 33 NC_009427 Novosphingobium aromaticivorans DSM 12444 plasmid pNL2, complete sequence 100466-100498 9 0.727
NC_020546_13 13.80|801114|36|NC_020546|CRISPRCasFinder,CRT,PILER-CR 801114-801149 36 DQ115853 Cyanobacteria phage AS-1 contig_46 genomic sequence 632-667 9 0.75
NC_020546_13 13.83|801319|33|NC_020546|CRISPRCasFinder,CRT,PILER-CR 801319-801351 33 NZ_CP010421 Azotobacter chroococcum NCIMB 8003 plasmid pAcX50f, complete sequence 115870-115902 9 0.727
NC_020546_13 13.86|801518|34|NC_020546|CRISPRCasFinder,CRT,PILER-CR 801518-801551 34 NZ_CP017076 Novosphingobium resinovorum strain SA1 plasmid pSA1, complete sequence 1578639-1578672 9 0.735
NC_020546_13 13.86|801518|34|NC_020546|CRISPRCasFinder,CRT,PILER-CR 801518-801551 34 NZ_LR536451 Methylocella tundrae isolate MTUNDRAET4 annotated genome plasmid 2 252793-252826 9 0.735
NC_020546_13 13.7|796975|34|NC_020546|PILER-CR,CRISPRCasFinder,CRT 796975-797008 34 NZ_CP032995 Escherichia coli strain W5-6 plasmid p3_W5-6, complete sequence 52831-52864 10 0.706
NC_020546_13 13.7|796975|34|NC_020546|PILER-CR,CRISPRCasFinder,CRT 796975-797008 34 NZ_KX518744 Escherichia coli strain HYEC7 plasmid pHYEC7-110, complete sequence 92641-92674 10 0.706
NC_020546_13 13.7|796975|34|NC_020546|PILER-CR,CRISPRCasFinder,CRT 796975-797008 34 NZ_CP041286 Escherichia coli strain 54 plasmid p54-tetX, complete sequence 90657-90690 10 0.706
NC_020546_13 13.7|796975|34|NC_020546|PILER-CR,CRISPRCasFinder,CRT 796975-797008 34 NZ_CP053729 Escherichia coli strain CP61_Sichuan plasmid pCP61-IncFIB, complete sequence 42088-42121 10 0.706
NC_020546_13 13.7|796975|34|NC_020546|PILER-CR,CRISPRCasFinder,CRT 796975-797008 34 NZ_CP053738 Escherichia coli strain CP8-3_Sichuan plasmid pCP8-3-IncFIB, complete sequence 64128-64161 10 0.706
NC_020546_13 13.7|796975|34|NC_020546|PILER-CR,CRISPRCasFinder,CRT 796975-797008 34 NZ_CP047092 Salmonella sp. S13 plasmid pS13-3, complete sequence 65446-65479 10 0.706
NC_020546_13 13.7|796975|34|NC_020546|PILER-CR,CRISPRCasFinder,CRT 796975-797008 34 KX023259 Escherichia coli plasmid pSCE516-4, complete sequence 4433-4466 10 0.706
NC_020546_13 13.7|796975|34|NC_020546|PILER-CR,CRISPRCasFinder,CRT 796975-797008 34 KX023259 Escherichia coli plasmid pSCE516-4, complete sequence 116305-116338 10 0.706
NC_020546_13 13.7|796975|34|NC_020546|PILER-CR,CRISPRCasFinder,CRT 796975-797008 34 NZ_CP046001 Escherichia coli strain 1916D6 plasmid p1916D6-1, complete sequence 23501-23534 10 0.706
NC_020546_13 13.7|796975|34|NC_020546|PILER-CR,CRISPRCasFinder,CRT 796975-797008 34 NZ_CP012682 Salmonella enterica subsp. enterica serovar Typhimurium strain 33676 plasmid p33676_IncA/C, complete sequence 46352-46385 10 0.706
NC_020546_13 13.7|796975|34|NC_020546|PILER-CR,CRISPRCasFinder,CRT 796975-797008 34 NZ_CP045188 Escherichia coli strain NT1F31 plasmid pNT1F31-tetX4, complete sequence 53258-53291 10 0.706
NC_020546_13 13.7|796975|34|NC_020546|PILER-CR,CRISPRCasFinder,CRT 796975-797008 34 NZ_CP044301 Escherichia coli strain P59A plasmid pP59A-3, complete sequence 56810-56843 10 0.706
NC_020546_13 13.7|796975|34|NC_020546|PILER-CR,CRISPRCasFinder,CRT 796975-797008 34 NZ_CP038140 Escherichia coli strain G3X16-2 plasmid pG3X16-2-3, complete sequence 126850-126883 10 0.706
NC_020546_13 13.7|796975|34|NC_020546|PILER-CR,CRISPRCasFinder,CRT 796975-797008 34 NZ_CP024144 Escherichia coli strain 14EC029 plasmid p14EC029c, complete sequence 85547-85580 10 0.706
NC_020546_13 13.7|796975|34|NC_020546|PILER-CR,CRISPRCasFinder,CRT 796975-797008 34 NZ_CP024130 Escherichia coli strain 14EC001 plasmid p14EC001c, complete sequence 11382-11415 10 0.706
NC_020546_13 13.7|796975|34|NC_020546|PILER-CR,CRISPRCasFinder,CRT 796975-797008 34 NZ_CP011429 Salmonella enterica subsp. enterica serovar Typhimurium strain YU39 isolate YUHS 05-78 plasmid pYU39_IncA/C, complete sequence 107307-107340 10 0.706
NC_020546_13 13.7|796975|34|NC_020546|PILER-CR,CRISPRCasFinder,CRT 796975-797008 34 NZ_CP032491 Salmonella enterica subsp. enterica serovar Typhimurium strain SL26 plasmid pSL26_IncA/C2, complete sequence 113642-113675 10 0.706
NC_020546_13 13.7|796975|34|NC_020546|PILER-CR,CRISPRCasFinder,CRT 796975-797008 34 NZ_CP050174 Escherichia coli strain STB20-1 plasmid pSTB20-1T, complete sequence 85173-85206 10 0.706
NC_020546_13 13.7|796975|34|NC_020546|PILER-CR,CRISPRCasFinder,CRT 796975-797008 34 NZ_CP041453 Escherichia coli strain YPE3 plasmid pYPE3-92k-tetX4, complete sequence 80657-80690 10 0.706
NC_020546_13 13.7|796975|34|NC_020546|PILER-CR,CRISPRCasFinder,CRT 796975-797008 34 NZ_CP041629 Escherichia coli strain PE15 plasmid pPE15-IncF, complete sequence 86686-86719 10 0.706
NC_020546_13 13.7|796975|34|NC_020546|PILER-CR,CRISPRCasFinder,CRT 796975-797008 34 NZ_CP041443 Escherichia coli strain YPE12 plasmid pYPE12-101k-tetX4, complete sequence 89816-89849 10 0.706
NC_020546_13 13.7|796975|34|NC_020546|PILER-CR,CRISPRCasFinder,CRT 796975-797008 34 NZ_MK656937 Escherichia coli strain T3 plasmid pT3, complete sequence 3971-4004 10 0.706
NC_020546_13 13.7|796975|34|NC_020546|PILER-CR,CRISPRCasFinder,CRT 796975-797008 34 MT219826 Escherichia coli strain RW8-1 plasmid pRW8-1_122k_tetX, complete sequence 110995-111028 10 0.706
NC_020546_13 13.7|796975|34|NC_020546|PILER-CR,CRISPRCasFinder,CRT 796975-797008 34 MT219817 Escherichia coli strain RF148-2 plasmid pRF148-2_101k_tetX, complete sequence 32796-32829 10 0.706
NC_020546_13 13.7|796975|34|NC_020546|PILER-CR,CRISPRCasFinder,CRT 796975-797008 34 MT219818 Escherichia coli strain RF148-1 plasmid pRF148-1_119k_tetX, complete sequence 107529-107562 10 0.706
NC_020546_13 13.7|796975|34|NC_020546|PILER-CR,CRISPRCasFinder,CRT 796975-797008 34 MT219819 Escherichia coli strain RF52-1 plasmid pRF52-1_119k_tetX, complete sequence 85624-85657 10 0.706
NC_020546_13 13.7|796975|34|NC_020546|PILER-CR,CRISPRCasFinder,CRT 796975-797008 34 MT219820 Escherichia coli strain RF108-2 plasmid pRF108-2_97k_tetX, complete sequence 9751-9784 10 0.706
NC_020546_13 13.7|796975|34|NC_020546|PILER-CR,CRISPRCasFinder,CRT 796975-797008 34 MT219823 Escherichia coli strain RF10-1 plasmid pRF10-1_119k_tetX, complete sequence 106954-106987 10 0.706
NC_020546_13 13.56|799505|35|NC_020546|CRISPRCasFinder,CRT,PILER-CR 799505-799539 35 HM144385 Brochothrix phage NF5, complete genome 12788-12822 10 0.714
NC_020546_13 13.73|800648|34|NC_020546|CRISPRCasFinder,CRT,PILER-CR 800648-800681 34 NZ_CP048308 Escherichia coli strain 9 plasmid p009_D, complete sequence 10966-10999 10 0.706
NC_020546_13 13.75|800781|34|NC_020546|CRISPRCasFinder,CRT,PILER-CR 800781-800814 34 NC_007765 Rhizobium etli CFN 42 plasmid p42e, complete sequence 168449-168482 10 0.706
NC_020546_13 13.102|802596|34|NC_020546|CRT,PILER-CR,CRISPRCasFinder 802596-802629 34 MN694551 Marine virus AFVG_250M1007, complete genome 12654-12687 10 0.706
NC_020546_13 13.8|797042|34|NC_020546|PILER-CR,CRISPRCasFinder,CRT 797042-797075 34 NZ_KR611317 Rickettsia endosymbiont of Ixodes pacificus strain Humboldt plasmid pREIP, complete sequence 96923-96956 11 0.676
NC_020546_13 13.44|798706|34|NC_020546|CRISPRCasFinder,CRT,PILER-CR 798706-798739 34 JX100810 Caulobacter phage CcrColossus, complete genome 100211-100244 11 0.676
NC_020546_13 13.44|798706|34|NC_020546|CRISPRCasFinder,CRT,PILER-CR 798706-798739 34 NZ_CP027024 Streptomyces sp. WAC00288 plasmid p2, complete sequence 103568-103601 11 0.676
NC_020546_13 13.44|798706|34|NC_020546|CRISPRCasFinder,CRT,PILER-CR 798706-798739 34 NZ_CP053905 Hymenobacter sp. BRD67 plasmid unnamed1, complete sequence 81836-81869 11 0.676
NC_020546_13 13.86|801518|34|NC_020546|CRISPRCasFinder,CRT,PILER-CR 801518-801551 34 NZ_CP032322 Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence 977290-977323 11 0.676
NC_020546_13 13.86|801518|34|NC_020546|CRISPRCasFinder,CRT,PILER-CR 801518-801551 34 NZ_CP022367 Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence 1360473-1360506 11 0.676
NC_020546_13 13.86|801518|34|NC_020546|CRISPRCasFinder,CRT,PILER-CR 801518-801551 34 NZ_CP032346 Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence 1649401-1649434 11 0.676
NC_020546_13 13.104|802729|34|NC_020546|CRT,PILER-CR,CRISPRCasFinder 802729-802762 34 NZ_CP053909 Hymenobacter sp. BRD128 plasmid unnamed1, complete sequence 38953-38986 11 0.676

1. spacer 13.92|801920|33|NC_020546|CRISPRCasFinder,CRT,PILER-CR matches to MH444512 (Bifidobacterium phage Willi, complete genome) position: , mismatch: 2, identity: 0.939

accaccgtcgccccaccgcccgtggtacgaagc	CRISPR spacer
accaccgtcgccccaccgcccgtggtgcgcagc	Protospacer
**************************.** ***

2. spacer 13.92|801920|33|NC_020546|CRISPRCasFinder,CRT,PILER-CR matches to MK932884 (Bifidobacterium phage PMBT6, complete genome) position: , mismatch: 2, identity: 0.939

accaccgtcgccccaccgcccgtggtacgaagc	CRISPR spacer
accaccgtcgccccaccgcccgtggtgcgcagc	Protospacer
**************************.** ***

3. spacer 13.93|801986|33|NC_020546|CRISPRCasFinder,CRT matches to NZ_CP046575 (Rhodococcus sp. WAY2 plasmid pRWAY03, complete sequence) position: , mismatch: 6, identity: 0.818

-ccgcacatggccgtgtacttcgcacagaacatc	CRISPR spacer
accgc-cacggccgtgtacttcgcacacaagggc	Protospacer
 **** **.****************** ** . *

4. spacer 24.1|1810514|29|NC_020546|CRISPRCasFinder matches to NZ_CP051472 (Rhodobacter sphaeroides strain CH10 plasmid pRspCH10C, complete sequence) position: , mismatch: 6, identity: 0.793

ttacagccccgccagcgtaaccagtttgg	CRISPR spacer
gatcagccccgccagcgtgaccagttcgt	Protospacer
   ***************.*******.* 

5. spacer 24.1|1810514|29|NC_020546|CRISPRCasFinder matches to NZ_CP012965 (Rhodobacter sphaeroides strain MBTLJ-8 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.793

ttacagccccgccagcgtaaccagtttgg	CRISPR spacer
gatcagccccgccagcgtgaccagttcgt	Protospacer
   ***************.*******.* 

6. spacer 24.1|1810514|29|NC_020546|CRISPRCasFinder matches to CP047035 (Rhodobacter sphaeroides strain DSM 158 plasmid pC, complete sequence) position: , mismatch: 6, identity: 0.793

ttacagccccgccagcgtaaccagtttgg	CRISPR spacer
gatcagccccgccagcgtgaccagttcgt	Protospacer
   ***************.*******.* 

7. spacer 24.1|1810514|29|NC_020546|CRISPRCasFinder matches to NZ_CP047041 (Rhodobacter sphaeroides strain 2.4.1 substr. H2 plasmid pC, complete sequence) position: , mismatch: 6, identity: 0.793

ttacagccccgccagcgtaaccagtttgg	CRISPR spacer
gatcagccccgccagcgtgaccagttcgt	Protospacer
   ***************.*******.* 

8. spacer 24.1|1810514|29|NC_020546|CRISPRCasFinder matches to NZ_CP015214 (Rhodobacter sphaeroides strain MBTLJ-13 plasmid c, complete sequence) position: , mismatch: 6, identity: 0.793

ttacagccccgccagcgtaaccagtttgg	CRISPR spacer
gatcagccccgccagcgtgaccagttcgt	Protospacer
   ***************.*******.* 

9. spacer 24.1|1810514|29|NC_020546|CRISPRCasFinder matches to NZ_CP030275 (Rhodobacter sphaeroides 2.4.1 plasmid pC, complete sequence) position: , mismatch: 6, identity: 0.793

ttacagccccgccagcgtaaccagtttgg	CRISPR spacer
gatcagccccgccagcgtgaccagttcgt	Protospacer
   ***************.*******.* 

10. spacer 24.1|1810514|29|NC_020546|CRISPRCasFinder matches to NZ_CP015292 (Rhodobacter sphaeroides strain MBTLJ-20 plasmid d, complete sequence) position: , mismatch: 6, identity: 0.793

ttacagccccgccagcgtaaccagtttgg	CRISPR spacer
gatcagccccgccagcgtgaccagttcgt	Protospacer
   ***************.*******.* 

11. spacer 13.16|797581|33|NC_020546|PILER-CR matches to NC_047872 (Listeria phage LMTA-94, complete genome) position: , mismatch: 7, identity: 0.788

ctcgcattgtcattttaattacctccttagttt	CRISPR spacer
ttttaactgtcattttaattaccaccttggttt	Protospacer
.*.  *.**************** ****.****

12. spacer 13.16|797581|33|NC_020546|PILER-CR matches to KJ591605 (Listeria phage LMTA-57, complete genome) position: , mismatch: 7, identity: 0.788

ctcgcattgtcattttaattacctccttagttt	CRISPR spacer
ttttaactgtcattttaattaccaccttggttt	Protospacer
.*.  *.**************** ****.****

13. spacer 13.16|797581|33|NC_020546|PILER-CR matches to NC_042048 (Listeria phage LMTA-34, complete genome) position: , mismatch: 7, identity: 0.788

ctcgcattgtcattttaattacctccttagttt	CRISPR spacer
ttttaactgtcattttaattaccaccttggttt	Protospacer
.*.  *.**************** ****.****

14. spacer 13.16|797581|33|NC_020546|PILER-CR matches to NC_024360 (Listeria phage LMSP-25, complete genome) position: , mismatch: 7, identity: 0.788

ctcgcattgtcattttaattacctccttagttt	CRISPR spacer
ttttaactgtcattttaattaccaccttggttt	Protospacer
.*.  *.**************** ****.****

15. spacer 13.16|797581|33|NC_020546|PILER-CR matches to MN172529 (Listeria phage LP-039, complete genome) position: , mismatch: 7, identity: 0.788

ctcgcattg----tcattttaattacctccttagttt	CRISPR spacer
----gattgttgttcattttaattaccacctttgttt	Protospacer
     ****    ************** **** ****

16. spacer 13.16|797581|33|NC_020546|PILER-CR matches to MN172529 (Listeria phage LP-039, complete genome) position: , mismatch: 7, identity: 0.788

ctcgcattg----tcattttaattacctccttagttt	CRISPR spacer
----gattgttgttcattttaattaccacctttgttt	Protospacer
     ****    ************** **** ****

17. spacer 13.16|797581|33|NC_020546|PILER-CR matches to KJ591604 (Listeria phage LMTA-148, complete genome) position: , mismatch: 7, identity: 0.788

ctcgcattg----tcattttaattacctccttagttt	CRISPR spacer
----gattgttgttcattttaattaccacctttgttt	Protospacer
     ****    ************** **** ****

18. spacer 13.16|797581|33|NC_020546|PILER-CR matches to KJ094033 (Listeria phage LP-048, complete genome) position: , mismatch: 7, identity: 0.788

ctcgcattg----tcattttaattacctccttagttt	CRISPR spacer
----gattgttgttcattttaattaccacctttgttt	Protospacer
     ****    ************** **** ****

19. spacer 13.27|797576|33|NC_020546|CRISPRCasFinder,CRT matches to NC_047872 (Listeria phage LMTA-94, complete genome) position: , mismatch: 7, identity: 0.788

ctcgcattgtcattttaattacctccttagttt	CRISPR spacer
ttttaactgtcattttaattaccaccttggttt	Protospacer
.*.  *.**************** ****.****

20. spacer 13.27|797576|33|NC_020546|CRISPRCasFinder,CRT matches to KJ591605 (Listeria phage LMTA-57, complete genome) position: , mismatch: 7, identity: 0.788

ctcgcattgtcattttaattacctccttagttt	CRISPR spacer
ttttaactgtcattttaattaccaccttggttt	Protospacer
.*.  *.**************** ****.****

21. spacer 13.27|797576|33|NC_020546|CRISPRCasFinder,CRT matches to NC_042048 (Listeria phage LMTA-34, complete genome) position: , mismatch: 7, identity: 0.788

ctcgcattgtcattttaattacctccttagttt	CRISPR spacer
ttttaactgtcattttaattaccaccttggttt	Protospacer
.*.  *.**************** ****.****

22. spacer 13.27|797576|33|NC_020546|CRISPRCasFinder,CRT matches to NC_024360 (Listeria phage LMSP-25, complete genome) position: , mismatch: 7, identity: 0.788

ctcgcattgtcattttaattacctccttagttt	CRISPR spacer
ttttaactgtcattttaattaccaccttggttt	Protospacer
.*.  *.**************** ****.****

23. spacer 13.27|797576|33|NC_020546|CRISPRCasFinder,CRT matches to MN172529 (Listeria phage LP-039, complete genome) position: , mismatch: 7, identity: 0.788

ctcgcattg----tcattttaattacctccttagttt	CRISPR spacer
----gattgttgttcattttaattaccacctttgttt	Protospacer
     ****    ************** **** ****

24. spacer 13.27|797576|33|NC_020546|CRISPRCasFinder,CRT matches to MN172529 (Listeria phage LP-039, complete genome) position: , mismatch: 7, identity: 0.788

ctcgcattg----tcattttaattacctccttagttt	CRISPR spacer
----gattgttgttcattttaattaccacctttgttt	Protospacer
     ****    ************** **** ****

25. spacer 13.27|797576|33|NC_020546|CRISPRCasFinder,CRT matches to KJ591604 (Listeria phage LMTA-148, complete genome) position: , mismatch: 7, identity: 0.788

ctcgcattg----tcattttaattacctccttagttt	CRISPR spacer
----gattgttgttcattttaattaccacctttgttt	Protospacer
     ****    ************** **** ****

26. spacer 13.27|797576|33|NC_020546|CRISPRCasFinder,CRT matches to KJ094033 (Listeria phage LP-048, complete genome) position: , mismatch: 7, identity: 0.788

ctcgcattg----tcattttaattacctccttagttt	CRISPR spacer
----gattgttgttcattttaattaccacctttgttt	Protospacer
     ****    ************** **** ****

27. spacer 13.42|798572|33|NC_020546|CRISPRCasFinder,CRT,PILER-CR matches to NC_010070 (Burkholderia multivorans ATCC 17616 plasmid pBMUL01, complete sequence) position: , mismatch: 7, identity: 0.788

ttggcgaac---ttgaccacgagcgggacgccgatg	CRISPR spacer
---acgagccagttgacgacgagcgtgacgccgatg	Protospacer
   .***.*   ***** ******* **********

28. spacer 13.42|798572|33|NC_020546|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013369 (Burkholderia ubonensis strain RF23-BP41 plasmid pRF23, complete sequence) position: , mismatch: 7, identity: 0.788

ttggcgaac---ttgaccacgagcgggacgccgatg	CRISPR spacer
---acgagccagttgacgacgagcgtgacgccgatg	Protospacer
   .***.*   ***** ******* **********

29. spacer 13.42|798572|33|NC_020546|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP028965 (Burkholderia sp. IDO3 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.788

ttggcgaac---ttgaccacgagcgggacgccgatg	CRISPR spacer
---acgagccagttgacgacgagcgtgacgccgatg	Protospacer
   .***.*   ***** ******* **********

30. spacer 13.42|798572|33|NC_020546|CRISPRCasFinder,CRT,PILER-CR matches to NC_010802 (Burkholderia multivorans ATCC 17616 plasmid pTGL1, complete sequence) position: , mismatch: 7, identity: 0.788

ttggcgaac---ttgaccacgagcgggacgccgatg	CRISPR spacer
---acgagccagttgacgacgagcgtgacgccgatg	Protospacer
   .***.*   ***** ******* **********

31. spacer 13.103|802663|33|NC_020546|CRT,PILER-CR,CRISPRCasFinder matches to NC_002679 (Mesorhizobium japonicum MAFF 303099 plasmid pMLa, complete sequence) position: , mismatch: 7, identity: 0.788

atctgtg-agccgacttctttcagattctgcgag	CRISPR spacer
-gcagcgtaggcgacttcgttcagattctgcgac	Protospacer
  * *.* ** ******* ************** 

32. spacer 13.111|803196|31|NC_020546|CRT matches to NZ_CP015205 (Rhodococcus sp. 008 plasmid pR8C2, complete sequence) position: , mismatch: 7, identity: 0.774

ggcaagaccagcgaacgcgaataccgcatca	CRISPR spacer
agcaagaccggcgaacgcggataccaccgcg	Protospacer
.********.*********.*****.*  *.

33. spacer 13.111|803196|31|NC_020546|CRT matches to NZ_CP025960 (Rhodococcus qingshengii strain djl-6-2 plasmid pDJL1, complete sequence) position: , mismatch: 7, identity: 0.774

ggcaagaccagcgaacgcgaataccgcatca	CRISPR spacer
agcaagaccggcgaacgcggataccaccgcg	Protospacer
.********.*********.*****.*  *.

34. spacer 13.111|803196|31|NC_020546|CRT matches to NZ_CP007256 (Rhodococcus erythropolis R138 plasmid pCRE138, complete sequence) position: , mismatch: 7, identity: 0.774

ggcaagaccagcgaacgcgaataccgcatca	CRISPR spacer
agcaagaccggcgaacgcggataccaccgcg	Protospacer
.********.*********.*****.*  *.

35. spacer 24.1|1810514|29|NC_020546|CRISPRCasFinder matches to NZ_CP023549 (Rhodobacter sp. CZR27 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.759

ttacagccccgccagcgtaaccagtttgg	CRISPR spacer
gatcagccccgccagcgtgaccagctcgt	Protospacer
   ***************.*****.*.* 

36. spacer 24.1|1810514|29|NC_020546|CRISPRCasFinder matches to NZ_CP023549 (Rhodobacter sp. CZR27 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.759

ttacagccccgccagcgtaaccagtttgg	CRISPR spacer
gatcagccccgccagcgtgaccagctcgt	Protospacer
   ***************.*****.*.* 

37. spacer 24.1|1810514|29|NC_020546|CRISPRCasFinder matches to NZ_CP023550 (Rhodobacter sp. CZR27 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.759

ttacagccccgccagcgtaaccagtttgg	CRISPR spacer
gatcagccccgccagcgtgaccagctcgt	Protospacer
   ***************.*****.*.* 

38. spacer 9.1|520795|29|NC_020546|CRISPRCasFinder matches to NZ_CP018172 (Mesorhizobium oceanicum strain B7 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.724

actcctcaaactggttacgctgggagcag	CRISPR spacer
cgacgcagaactggttacgctgggtgcag	Protospacer
   * . .**************** ****

39. spacer 13.16|797581|33|NC_020546|PILER-CR matches to MK360024 (Enterococcus phage vB_EfaS_Max, complete genome) position: , mismatch: 8, identity: 0.758

ctcgcattgtcattttaattacctccttagttt	CRISPR spacer
catattttgtcatttttatttcctccttagttg	Protospacer
* ... ********** *** *********** 

40. spacer 13.16|797581|33|NC_020546|PILER-CR matches to NC_042101 (Enterococcus phage PMBT2, complete genome) position: , mismatch: 8, identity: 0.758

ctcgcattgtcattttaattacctccttagttt	CRISPR spacer
catattttgtcatttttatttcctccttagttg	Protospacer
* ... ********** *** *********** 

41. spacer 13.16|797581|33|NC_020546|PILER-CR matches to MK982307 (Enterococcus phage MSF2, complete genome) position: , mismatch: 8, identity: 0.758

ctcgcattgtcattttaattacctccttagttt	CRISPR spacer
tttttgttgtcatttttatttcctccttagttg	Protospacer
.*. ..********** *** *********** 

42. spacer 13.16|797581|33|NC_020546|PILER-CR matches to MK721186 (Enterococcus phage vB_EfaS_Ef5.2, complete genome) position: , mismatch: 8, identity: 0.758

ctcgcattgtcattttaattacctccttagttt	CRISPR spacer
catattttgtcatttttatttcctccttagttg	Protospacer
* ... ********** *** *********** 

43. spacer 13.16|797581|33|NC_020546|PILER-CR matches to NC_042021 (Enterococcus phage phiSHEF2, complete genome) position: , mismatch: 8, identity: 0.758

ctcgcattgtcattttaattacctccttagttt	CRISPR spacer
catattttgtcatttttatttcctccttagttg	Protospacer
* ... ********** *** *********** 

44. spacer 13.16|797581|33|NC_020546|PILER-CR matches to NZ_CP040830 (Paenibacillus polymyxa strain ZF129 plasmid pAP1, complete sequence) position: , mismatch: 8, identity: 0.758

ctcgcattgtcattttaattacctccttagttt	CRISPR spacer
gttgagtaatcattttaataacctccttggttt	Protospacer
 *.* .* .********** ********.****

45. spacer 13.27|797576|33|NC_020546|CRISPRCasFinder,CRT matches to MK360024 (Enterococcus phage vB_EfaS_Max, complete genome) position: , mismatch: 8, identity: 0.758

ctcgcattgtcattttaattacctccttagttt	CRISPR spacer
catattttgtcatttttatttcctccttagttg	Protospacer
* ... ********** *** *********** 

46. spacer 13.27|797576|33|NC_020546|CRISPRCasFinder,CRT matches to NC_042101 (Enterococcus phage PMBT2, complete genome) position: , mismatch: 8, identity: 0.758

ctcgcattgtcattttaattacctccttagttt	CRISPR spacer
catattttgtcatttttatttcctccttagttg	Protospacer
* ... ********** *** *********** 

47. spacer 13.27|797576|33|NC_020546|CRISPRCasFinder,CRT matches to MK982307 (Enterococcus phage MSF2, complete genome) position: , mismatch: 8, identity: 0.758

ctcgcattgtcattttaattacctccttagttt	CRISPR spacer
tttttgttgtcatttttatttcctccttagttg	Protospacer
.*. ..********** *** *********** 

48. spacer 13.27|797576|33|NC_020546|CRISPRCasFinder,CRT matches to MK721186 (Enterococcus phage vB_EfaS_Ef5.2, complete genome) position: , mismatch: 8, identity: 0.758

ctcgcattgtcattttaattacctccttagttt	CRISPR spacer
catattttgtcatttttatttcctccttagttg	Protospacer
* ... ********** *** *********** 

49. spacer 13.27|797576|33|NC_020546|CRISPRCasFinder,CRT matches to NC_042021 (Enterococcus phage phiSHEF2, complete genome) position: , mismatch: 8, identity: 0.758

ctcgcattgtcattttaattacctccttagttt	CRISPR spacer
catattttgtcatttttatttcctccttagttg	Protospacer
* ... ********** *** *********** 

50. spacer 13.27|797576|33|NC_020546|CRISPRCasFinder,CRT matches to NZ_CP040830 (Paenibacillus polymyxa strain ZF129 plasmid pAP1, complete sequence) position: , mismatch: 8, identity: 0.758

ctcgcattgtcattttaattacctccttagttt	CRISPR spacer
gttgagtaatcattttaataacctccttggttt	Protospacer
 *.* .* .********** ********.****

51. spacer 13.33|797974|33|NC_020546|CRISPRCasFinder,CRT matches to JX100810 (Caulobacter phage CcrColossus, complete genome) position: , mismatch: 8, identity: 0.758

gttgactg-cacggttggcaaggtggacgtgttc	CRISPR spacer
-cggatagtcacgtttggcaaggtggtcgtgttg	Protospacer
 . **. * **** ************ ****** 

52. spacer 13.44|798706|34|NC_020546|CRISPRCasFinder,CRT,PILER-CR matches to NC_021056 (Streptomyces sp. PAMC 26508 plasmid pSP01, complete sequence) position: , mismatch: 8, identity: 0.765

tccgcctcgcgacgctcctgctcggtgacctgca	CRISPR spacer
tccgcctcgcgacgctcgtcctcgctctcgtccc	Protospacer
***************** * **** *  * * * 

53. spacer 13.44|798706|34|NC_020546|CRISPRCasFinder,CRT,PILER-CR matches to NC_016110 (Streptomyces pratensis ATCC 33331 plasmid pSFLA01, complete sequence) position: , mismatch: 8, identity: 0.765

tccgcctcgcgacgctcctgctcggtgacctgca	CRISPR spacer
tccgcctcgcgacgctcgtcctcgctctcgtccc	Protospacer
***************** * **** *  * * * 

54. spacer 13.104|802729|34|NC_020546|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP049158 (Caballeronia sp. SBC1 plasmid pSBC1_2, complete sequence) position: , mismatch: 8, identity: 0.765

cgcgcttgccgagtaccagctggtctggctggtg	CRISPR spacer
tgcgcttgccgaggaccagcttgtcgcgatcgta	Protospacer
.************ ******* ***  * * **.

55. spacer 13.104|802729|34|NC_020546|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP049318 (Caballeronia sp. SBC2 plasmid pSBC2-2, complete sequence) position: , mismatch: 8, identity: 0.765

cgcgcttgccgagtaccagctggtctggctggtg	CRISPR spacer
tgcgcttgccgaggaccagcttgtcgcgatcgta	Protospacer
.************ ******* ***  * * **.

56. spacer 13.104|802729|34|NC_020546|CRT,PILER-CR,CRISPRCasFinder matches to KP027201 (Mycobacterium phage Sbash, complete genome) position: , mismatch: 8, identity: 0.765

cgcgcttgccgagtaccagctggtctggctggtg	CRISPR spacer
cgcccttgccgagtaccagcttgtgcgcgacgtg	Protospacer
*** ***************** ** .*    ***

57. spacer 13.111|803196|31|NC_020546|CRT matches to NZ_CP010871 (Confluentimicrobium sp. EMB200-NS6 strain EMBL200_NS6 plasmid pNS6002, complete sequence) position: , mismatch: 8, identity: 0.742

ggcaagaccagcgaacgcgaataccgcatca	CRISPR spacer
atcaagaccagcgaacgcgagtacgagttcg	Protospacer
. ******************.*** .  **.

58. spacer 13.111|803196|31|NC_020546|CRT matches to NZ_CP017300 (Rhodococcus sp. YL-1 plasmid pYLC1, complete sequence) position: , mismatch: 8, identity: 0.742

ggcaagaccagcgaacgcgaataccgcatca	CRISPR spacer
agcaagaccggcgaacgcggataccaccgag	Protospacer
.********.*********.*****.*   .

59. spacer 13.16|797581|33|NC_020546|PILER-CR matches to NC_047872 (Listeria phage LMTA-94, complete genome) position: , mismatch: 9, identity: 0.727

ctcgcattgtcattttaattacctccttagttt	CRISPR spacer
ttactacattcattttaattaccacctttgttt	Protospacer
.*  .*.  ************** **** ****

60. spacer 13.16|797581|33|NC_020546|PILER-CR matches to KJ591605 (Listeria phage LMTA-57, complete genome) position: , mismatch: 9, identity: 0.727

ctcgcattgtcattttaattacctccttagttt	CRISPR spacer
ttactacattcattttaattaccacctttgttt	Protospacer
.*  .*.  ************** **** ****

61. spacer 13.16|797581|33|NC_020546|PILER-CR matches to NC_042048 (Listeria phage LMTA-34, complete genome) position: , mismatch: 9, identity: 0.727

ctcgcattgtcattttaattacctccttagttt	CRISPR spacer
ttactacattcattttaattaccacctttgttt	Protospacer
.*  .*.  ************** **** ****

62. spacer 13.16|797581|33|NC_020546|PILER-CR matches to NC_024360 (Listeria phage LMSP-25, complete genome) position: , mismatch: 9, identity: 0.727

ctcgcattgtcattttaattacctccttagttt	CRISPR spacer
ttactacattcattttaattaccacctttgttt	Protospacer
.*  .*.  ************** **** ****

63. spacer 13.16|797581|33|NC_020546|PILER-CR matches to KJ535721 (Listeria phage List-36, complete genome) position: , mismatch: 9, identity: 0.727

ctcgcattgtcattttaattacctccttagttt	CRISPR spacer
ttactacgttcattttaattaccacctttgttt	Protospacer
.*  .*.  ************** **** ****

64. spacer 13.27|797576|33|NC_020546|CRISPRCasFinder,CRT matches to NC_047872 (Listeria phage LMTA-94, complete genome) position: , mismatch: 9, identity: 0.727

ctcgcattgtcattttaattacctccttagttt	CRISPR spacer
ttactacattcattttaattaccacctttgttt	Protospacer
.*  .*.  ************** **** ****

65. spacer 13.27|797576|33|NC_020546|CRISPRCasFinder,CRT matches to KJ591605 (Listeria phage LMTA-57, complete genome) position: , mismatch: 9, identity: 0.727

ctcgcattgtcattttaattacctccttagttt	CRISPR spacer
ttactacattcattttaattaccacctttgttt	Protospacer
.*  .*.  ************** **** ****

66. spacer 13.27|797576|33|NC_020546|CRISPRCasFinder,CRT matches to NC_042048 (Listeria phage LMTA-34, complete genome) position: , mismatch: 9, identity: 0.727

ctcgcattgtcattttaattacctccttagttt	CRISPR spacer
ttactacattcattttaattaccacctttgttt	Protospacer
.*  .*.  ************** **** ****

67. spacer 13.27|797576|33|NC_020546|CRISPRCasFinder,CRT matches to NC_024360 (Listeria phage LMSP-25, complete genome) position: , mismatch: 9, identity: 0.727

ctcgcattgtcattttaattacctccttagttt	CRISPR spacer
ttactacattcattttaattaccacctttgttt	Protospacer
.*  .*.  ************** **** ****

68. spacer 13.27|797576|33|NC_020546|CRISPRCasFinder,CRT matches to KJ535721 (Listeria phage List-36, complete genome) position: , mismatch: 9, identity: 0.727

ctcgcattgtcattttaattacctccttagttt	CRISPR spacer
ttactacgttcattttaattaccacctttgttt	Protospacer
.*  .*.  ************** **** ****

69. spacer 13.48|798971|34|NC_020546|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP030205 (Salmonella enterica strain SA20083530 plasmid pSA20083530.2, complete sequence) position: , mismatch: 9, identity: 0.735

caccatcgcttgtcccttttgtttctccctcaca	CRISPR spacer
gaccatcgctggtctcttttgtttcctgcgcatt	Protospacer
 ********* ***.**********.. * **. 

70. spacer 13.75|800781|34|NC_020546|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020909 (Rhizobium etli strain NXC12 plasmid pRetNXC12c, complete sequence) position: , mismatch: 9, identity: 0.735

ctccgcacgcctctcgggagaccatgcggcacgt	CRISPR spacer
tcgcgcacgcctttcggcagaccatgcgcttcgc	Protospacer
.. *********.**** ********** . **.

71. spacer 13.76|800848|33|NC_020546|CRISPRCasFinder,CRT,PILER-CR matches to NC_009427 (Novosphingobium aromaticivorans DSM 12444 plasmid pNL2, complete sequence) position: , mismatch: 9, identity: 0.727

cctagtcctttccatcagccgcgagcaatgtcg	CRISPR spacer
gcttggcctttccatcagccgcgagatcgcccg	Protospacer
 ** * *******************     .**

72. spacer 13.80|801114|36|NC_020546|CRISPRCasFinder,CRT,PILER-CR matches to DQ115853 (Cyanobacteria phage AS-1 contig_46 genomic sequence) position: , mismatch: 9, identity: 0.75

---cgagataaagggaagccgctggaggacttgcagaag	CRISPR spacer
gactggggc---ggcaagccgctggaggacctgcagaag	Protospacer
   .*.*..   ** ***************.********

73. spacer 13.83|801319|33|NC_020546|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010421 (Azotobacter chroococcum NCIMB 8003 plasmid pAcX50f, complete sequence) position: , mismatch: 9, identity: 0.727

aatttcacctgcatcagcttgcttgtggtgtgt	CRISPR spacer
ggtgaagactgcatcaggttgctcgtggtgtgt	Protospacer
..*   . ********* *****.*********

74. spacer 13.86|801518|34|NC_020546|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017076 (Novosphingobium resinovorum strain SA1 plasmid pSA1, complete sequence) position: , mismatch: 9, identity: 0.735

accgtgaacgggcccatgccgtccggcgtgcggc	CRISPR spacer
ccagtgaacgtgctcatgccgtccggcacgggcg	Protospacer
 * ******* **.*************..* *  

75. spacer 13.86|801518|34|NC_020546|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR536451 (Methylocella tundrae isolate MTUNDRAET4 annotated genome plasmid 2) position: , mismatch: 9, identity: 0.735

---accgtgaacgggcccatgccgtccggcgtgcggc	CRISPR spacer
cggggcgt---cgggcgcatgccgtccggcgcgcgcg	Protospacer
   . ***   ***** **************.***  

76. spacer 13.7|796975|34|NC_020546|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032995 (Escherichia coli strain W5-6 plasmid p3_W5-6, complete sequence) position: , mismatch: 10, identity: 0.706

ctccctttaggattcctgttggattggtgtcagc	CRISPR spacer
accagtttagcactcctgttggattggtgtgtat	Protospacer
 .*  ***** *.*****************  ..

77. spacer 13.7|796975|34|NC_020546|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KX518744 (Escherichia coli strain HYEC7 plasmid pHYEC7-110, complete sequence) position: , mismatch: 10, identity: 0.706

ctccctttaggattcctgttggattggtgtcagc	CRISPR spacer
accagtttagcactcctgttggattggtgtgtat	Protospacer
 .*  ***** *.*****************  ..

78. spacer 13.7|796975|34|NC_020546|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041286 (Escherichia coli strain 54 plasmid p54-tetX, complete sequence) position: , mismatch: 10, identity: 0.706

ctccctttaggattcctgttggattggtgtcagc	CRISPR spacer
accagtttagcactcctgttggattggtgtgtat	Protospacer
 .*  ***** *.*****************  ..

79. spacer 13.7|796975|34|NC_020546|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053729 (Escherichia coli strain CP61_Sichuan plasmid pCP61-IncFIB, complete sequence) position: , mismatch: 10, identity: 0.706

ctccctttaggattcctgttggattggtgtcagc	CRISPR spacer
accagtttagcactcctgttggattggtgtgtat	Protospacer
 .*  ***** *.*****************  ..

80. spacer 13.7|796975|34|NC_020546|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053738 (Escherichia coli strain CP8-3_Sichuan plasmid pCP8-3-IncFIB, complete sequence) position: , mismatch: 10, identity: 0.706

ctccctttaggattcctgttggattggtgtcagc	CRISPR spacer
accagtttagcactcctgttggattggtgtgtat	Protospacer
 .*  ***** *.*****************  ..

81. spacer 13.7|796975|34|NC_020546|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP047092 (Salmonella sp. S13 plasmid pS13-3, complete sequence) position: , mismatch: 10, identity: 0.706

ctccctttaggattcctgttggattggtgtcagc	CRISPR spacer
accagtttagcactcctgttggattggtgtgtat	Protospacer
 .*  ***** *.*****************  ..

82. spacer 13.7|796975|34|NC_020546|PILER-CR,CRISPRCasFinder,CRT matches to KX023259 (Escherichia coli plasmid pSCE516-4, complete sequence) position: , mismatch: 10, identity: 0.706

ctccctttaggattcctgttggattggtgtcagc	CRISPR spacer
accagtttagcactcctgttggattggtgtgtat	Protospacer
 .*  ***** *.*****************  ..

83. spacer 13.7|796975|34|NC_020546|PILER-CR,CRISPRCasFinder,CRT matches to KX023259 (Escherichia coli plasmid pSCE516-4, complete sequence) position: , mismatch: 10, identity: 0.706

ctccctttaggattcctgttggattggtgtcagc	CRISPR spacer
accagtttagcactcctgttggattggtgtgtat	Protospacer
 .*  ***** *.*****************  ..

84. spacer 13.7|796975|34|NC_020546|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046001 (Escherichia coli strain 1916D6 plasmid p1916D6-1, complete sequence) position: , mismatch: 10, identity: 0.706

ctccctttaggattcctgttggattggtgtcagc	CRISPR spacer
accagtttagcactcctgttggattggtgtgtat	Protospacer
 .*  ***** *.*****************  ..

85. spacer 13.7|796975|34|NC_020546|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012682 (Salmonella enterica subsp. enterica serovar Typhimurium strain 33676 plasmid p33676_IncA/C, complete sequence) position: , mismatch: 10, identity: 0.706

ctccctttaggattcctgttggattggtgtcagc	CRISPR spacer
accagtttagcactcctgttggattggtgtgtat	Protospacer
 .*  ***** *.*****************  ..

86. spacer 13.7|796975|34|NC_020546|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045188 (Escherichia coli strain NT1F31 plasmid pNT1F31-tetX4, complete sequence) position: , mismatch: 10, identity: 0.706

ctccctttaggattcctgttggattggtgtcagc	CRISPR spacer
accagtttagcactcctgttggattggtgtgtat	Protospacer
 .*  ***** *.*****************  ..

87. spacer 13.7|796975|34|NC_020546|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044301 (Escherichia coli strain P59A plasmid pP59A-3, complete sequence) position: , mismatch: 10, identity: 0.706

ctccctttaggattcctgttggattggtgtcagc	CRISPR spacer
accagtttagcactcctgttggattggtgtgtat	Protospacer
 .*  ***** *.*****************  ..

88. spacer 13.7|796975|34|NC_020546|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP038140 (Escherichia coli strain G3X16-2 plasmid pG3X16-2-3, complete sequence) position: , mismatch: 10, identity: 0.706

ctccctttaggattcctgttggattggtgtcagc	CRISPR spacer
accagtttagcactcctgttggattggtgtgtat	Protospacer
 .*  ***** *.*****************  ..

89. spacer 13.7|796975|34|NC_020546|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024144 (Escherichia coli strain 14EC029 plasmid p14EC029c, complete sequence) position: , mismatch: 10, identity: 0.706

ctccctttaggattcctgttggattggtgtcagc	CRISPR spacer
accagtttagcactcctgttggattggtgtgtat	Protospacer
 .*  ***** *.*****************  ..

90. spacer 13.7|796975|34|NC_020546|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024130 (Escherichia coli strain 14EC001 plasmid p14EC001c, complete sequence) position: , mismatch: 10, identity: 0.706

ctccctttaggattcctgttggattggtgtcagc	CRISPR spacer
accagtttagcactcctgttggattggtgtgtat	Protospacer
 .*  ***** *.*****************  ..

91. spacer 13.7|796975|34|NC_020546|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011429 (Salmonella enterica subsp. enterica serovar Typhimurium strain YU39 isolate YUHS 05-78 plasmid pYU39_IncA/C, complete sequence) position: , mismatch: 10, identity: 0.706

ctccctttaggattcctgttggattggtgtcagc	CRISPR spacer
accagtttagcactcctgttggattggtgtgtat	Protospacer
 .*  ***** *.*****************  ..

92. spacer 13.7|796975|34|NC_020546|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032491 (Salmonella enterica subsp. enterica serovar Typhimurium strain SL26 plasmid pSL26_IncA/C2, complete sequence) position: , mismatch: 10, identity: 0.706

ctccctttaggattcctgttggattggtgtcagc	CRISPR spacer
accagtttagcactcctgttggattggtgtgtat	Protospacer
 .*  ***** *.*****************  ..

93. spacer 13.7|796975|34|NC_020546|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050174 (Escherichia coli strain STB20-1 plasmid pSTB20-1T, complete sequence) position: , mismatch: 10, identity: 0.706

ctccctttaggattcctgttggattggtgtcagc	CRISPR spacer
accagtttagcactcctgttggattggtgtgtat	Protospacer
 .*  ***** *.*****************  ..

94. spacer 13.7|796975|34|NC_020546|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041453 (Escherichia coli strain YPE3 plasmid pYPE3-92k-tetX4, complete sequence) position: , mismatch: 10, identity: 0.706

ctccctttaggattcctgttggattggtgtcagc	CRISPR spacer
accagtttagcactcctgttggattggtgtgtat	Protospacer
 .*  ***** *.*****************  ..

95. spacer 13.7|796975|34|NC_020546|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041629 (Escherichia coli strain PE15 plasmid pPE15-IncF, complete sequence) position: , mismatch: 10, identity: 0.706

ctccctttaggattcctgttggattggtgtcagc	CRISPR spacer
accagtttagcactcctgttggattggtgtgtat	Protospacer
 .*  ***** *.*****************  ..

96. spacer 13.7|796975|34|NC_020546|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041443 (Escherichia coli strain YPE12 plasmid pYPE12-101k-tetX4, complete sequence) position: , mismatch: 10, identity: 0.706

ctccctttaggattcctgttggattggtgtcagc	CRISPR spacer
accagtttagcactcctgttggattggtgtgtat	Protospacer
 .*  ***** *.*****************  ..

97. spacer 13.7|796975|34|NC_020546|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MK656937 (Escherichia coli strain T3 plasmid pT3, complete sequence) position: , mismatch: 10, identity: 0.706

ctccctttaggattcctgttggattggtgtcagc	CRISPR spacer
accagtttagcactcctgttggattggtgtgtat	Protospacer
 .*  ***** *.*****************  ..

98. spacer 13.7|796975|34|NC_020546|PILER-CR,CRISPRCasFinder,CRT matches to MT219826 (Escherichia coli strain RW8-1 plasmid pRW8-1_122k_tetX, complete sequence) position: , mismatch: 10, identity: 0.706

ctccctttaggattcctgttggattggtgtcagc	CRISPR spacer
accagtttagcactcctgttggattggtgtgtat	Protospacer
 .*  ***** *.*****************  ..

99. spacer 13.7|796975|34|NC_020546|PILER-CR,CRISPRCasFinder,CRT matches to MT219817 (Escherichia coli strain RF148-2 plasmid pRF148-2_101k_tetX, complete sequence) position: , mismatch: 10, identity: 0.706

ctccctttaggattcctgttggattggtgtcagc	CRISPR spacer
accagtttagcactcctgttggattggtgtgtat	Protospacer
 .*  ***** *.*****************  ..

100. spacer 13.7|796975|34|NC_020546|PILER-CR,CRISPRCasFinder,CRT matches to MT219818 (Escherichia coli strain RF148-1 plasmid pRF148-1_119k_tetX, complete sequence) position: , mismatch: 10, identity: 0.706

ctccctttaggattcctgttggattggtgtcagc	CRISPR spacer
accagtttagcactcctgttggattggtgtgtat	Protospacer
 .*  ***** *.*****************  ..

101. spacer 13.7|796975|34|NC_020546|PILER-CR,CRISPRCasFinder,CRT matches to MT219819 (Escherichia coli strain RF52-1 plasmid pRF52-1_119k_tetX, complete sequence) position: , mismatch: 10, identity: 0.706

ctccctttaggattcctgttggattggtgtcagc	CRISPR spacer
accagtttagcactcctgttggattggtgtgtat	Protospacer
 .*  ***** *.*****************  ..

102. spacer 13.7|796975|34|NC_020546|PILER-CR,CRISPRCasFinder,CRT matches to MT219820 (Escherichia coli strain RF108-2 plasmid pRF108-2_97k_tetX, complete sequence) position: , mismatch: 10, identity: 0.706

ctccctttaggattcctgttggattggtgtcagc	CRISPR spacer
accagtttagcactcctgttggattggtgtgtat	Protospacer
 .*  ***** *.*****************  ..

103. spacer 13.7|796975|34|NC_020546|PILER-CR,CRISPRCasFinder,CRT matches to MT219823 (Escherichia coli strain RF10-1 plasmid pRF10-1_119k_tetX, complete sequence) position: , mismatch: 10, identity: 0.706

ctccctttaggattcctgttggattggtgtcagc	CRISPR spacer
accagtttagcactcctgttggattggtgtgtat	Protospacer
 .*  ***** *.*****************  ..

104. spacer 13.56|799505|35|NC_020546|CRISPRCasFinder,CRT,PILER-CR matches to HM144385 (Brochothrix phage NF5, complete genome) position: , mismatch: 10, identity: 0.714

acgagtgcttggacgattgacggcactttaaacat	CRISPR spacer
gaaacagcttggacgattgacggtacttttaatgc	Protospacer
. .*  *****************.***** **...

105. spacer 13.73|800648|34|NC_020546|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP048308 (Escherichia coli strain 9 plasmid p009_D, complete sequence) position: , mismatch: 10, identity: 0.706

attaccgaagggatcagcgcataatgtcctgcga	CRISPR spacer
atcaccgaagggatcagcgcaaaattaatcggct	Protospacer
**.****************** ***   ..*   

106. spacer 13.75|800781|34|NC_020546|CRISPRCasFinder,CRT,PILER-CR matches to NC_007765 (Rhizobium etli CFN 42 plasmid p42e, complete sequence) position: , mismatch: 10, identity: 0.706

ctccgcacgcctctcgggagaccatgcggcacgt	CRISPR spacer
tcgcgcacgcctttcggcagaccatgcgctttgc	Protospacer
.. *********.**** ********** . .*.

107. spacer 13.102|802596|34|NC_020546|CRT,PILER-CR,CRISPRCasFinder matches to MN694551 (Marine virus AFVG_250M1007, complete genome) position: , mismatch: 10, identity: 0.706

agtctcttcttccaatcatcagattcagccattt	CRISPR spacer
ggtctctttttccaaacatcagattttgtttgtc	Protospacer
.*******.****** *********. *..  *.

108. spacer 13.8|797042|34|NC_020546|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KR611317 (Rickettsia endosymbiont of Ixodes pacificus strain Humboldt plasmid pREIP, complete sequence) position: , mismatch: 11, identity: 0.676

ttcgaatgagccggataaggaatatgattttatc	CRISPR spacer
actaaatgagcctgatgaggaatatgatgatgaa	Protospacer
 ...******** ***.***********  *.  

109. spacer 13.44|798706|34|NC_020546|CRISPRCasFinder,CRT,PILER-CR matches to JX100810 (Caulobacter phage CcrColossus, complete genome) position: , mismatch: 11, identity: 0.676

tccgcctcgcgacgctcctgctcggtgacctgca	CRISPR spacer
aaggcctcgcggcgctcctcctcggtgaaggtgg	Protospacer
   ********.******* ********     .

110. spacer 13.44|798706|34|NC_020546|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP027024 (Streptomyces sp. WAC00288 plasmid p2, complete sequence) position: , mismatch: 11, identity: 0.676

tccgcctcgcgacgctcctgctcggtgacctgca	CRISPR spacer
aggagctggcggcgctcctgctcggtgacaccta	Protospacer
   . ** ***.***************** . .*

111. spacer 13.44|798706|34|NC_020546|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP053905 (Hymenobacter sp. BRD67 plasmid unnamed1, complete sequence) position: , mismatch: 11, identity: 0.676

tccgcctcgcgacgctcctgctcggtgacctgca	CRISPR spacer
aggtcgaagcgacgctcctgctcgaagacctggc	Protospacer
    *   ****************. ******  

112. spacer 13.86|801518|34|NC_020546|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032322 (Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence) position: , mismatch: 11, identity: 0.676

accgtgaacgggcccatgccgtccggcgtgcggc	CRISPR spacer
gaggacaacgggcgcgtgccgtccggcgtgtcct	Protospacer
.  *  ******* *.**************.  .

113. spacer 13.86|801518|34|NC_020546|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022367 (Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence) position: , mismatch: 11, identity: 0.676

accgtgaacgggcccatgccgtccggcgtgcggc	CRISPR spacer
gaggacaacgggcgcgtgccgtccggcgtgtcct	Protospacer
.  *  ******* *.**************.  .

114. spacer 13.86|801518|34|NC_020546|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032346 (Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence) position: , mismatch: 11, identity: 0.676

accgtgaacgggcccatgccgtccggcgtgcggc	CRISPR spacer
gaggacaacgggcgcgtgccgtccggcgtgtcct	Protospacer
.  *  ******* *.**************.  .

115. spacer 13.104|802729|34|NC_020546|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP053909 (Hymenobacter sp. BRD128 plasmid unnamed1, complete sequence) position: , mismatch: 11, identity: 0.676

cgcgcttgccgagtaccagctggtctggctggtg	CRISPR spacer
aagaagaggcgagcaccagctggtcgggctggtt	Protospacer
 . .   * ****.*********** ******* 

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage