CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NC_020556	Helicobacter pylori OK310 plasmid pHPOK310, complete sequence	0 crisprs	NA	0	0	0	0
NC_020509	Helicobacter pylori OK310, complete genome	2 crisprs	cas2,DEDDh	1	3	1	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NC_020509_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_020509_1

135191-135288

Orphan

Consensus_repeat	Method
CTTTCTTGTTCTAACTCTATCTCACTCTTATTTGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_020509_1

>merge|NC_020509|1|135191-135288|CRISPRCasFinder
CTTTCTTGTTCTAACTCTATCTCACTCTTATTTGCTTTTTGTTTTTCTTGTTCTGTTTTCTGTCTTTCTTGTTCTAACTCTATCCCACTCTTATTTGC

>NC_020509|1|1|135191-135288|CRISPRCasFinder
CTTTCTTGTTCTAACTCTATCTCACTCTTATTTGC	TTTTTGTTTTTCTTGTTCTGTTTTCTGT
CTTTCTTGTTCTAACTCTATCCCACTCTTATTTGC

Protein	Signature genes	Signature genes Name	Protein_function
NC_020509.1\|WP_015428574.1\|133373_134300_+\|radical-SAM-protein	unknown	unknown	gnl\|CDD\|223803
NC_020509.1\|WP_015428581.1\|143914_144784_+\|hypothetical-protein	unknown	unknown	unknown
NC_020509.1\|WP_015428571.1\|127206_127503_+\|hypothetical-protein	unknown	unknown	unknown
NC_020509.1\|WP_015428578.1\|141310_141661_+\|50S-ribosomal-protein-L20	unknown	unknown	gnl\|CDD\|179959
NC_020509.1\|WP_015428583.1\|147009_148251_-\|HAAAP-family-serine/threonine-permease	unknown	unknown	gnl\|CDD\|273283
NC_020509.1\|WP_015428582.1\|145642_147010_-\|L-serine-ammonia-lyase	unknown	unknown	gnl\|CDD\|273233
NC_020509.1\|WP_015428567.1\|121857_122775_-\|cysteine-synthase-family-protein	unknown	unknown	gnl\|CDD\|107204
NC_020509.1\|WP_015428580.1\|143077_143509_+\|DUF1104-domain-containing-protein	unknown	unknown	gnl\|CDD\|368949
NC_020509.1\|WP_000009993.1\|129460_131005_-\|flagellin-B	unknown	unknown	gnl\|CDD\|237440
NC_020509.1\|WP_041199901.1\|127514_129398_-\|motility-associated-factor-glycosyltransferase-family-protein	unknown	unknown	gnl\|CDD\|225324
NC_020509.1\|WP_015428579.1\|141860_142721_+\|outer-membrane-protein	unknown	unknown	gnl\|CDD\|280099
NC_020509.1\|WP_000089218.1\|140429_141041_+\|translation-initiation-factor-IF-3	unknown	unknown	gnl\|CDD\|129272
NC_020509.1\|WP_015428573.1\|131170_133381_+\|type-I-DNA-topoisomerase	unknown	unknown	gnl\|CDD\|235516
NC_020509.1\|WP_038419362.1\|126547_127186_+\|class-II-aldolase/adducin-family-protein	unknown	unknown	gnl\|CDD\|180279
NC_020509.1\|WP_015428570.1\|125496_126327_-\|HrcA-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|235174
NC_020509.1\|WP_015428568.1\|123028_124891_-\|molecular-chaperone-DnaK	unknown	unknown	gnl\|CDD\|234715
NC_020509.1\|WP_015428576.1\|135797_138236_-\|pyruvate,-water-dikinase	unknown	unknown	gnl\|CDD\|235809
NC_020509.1\|WP_015428577.1\|138594_140433_+\|threonine--tRNA-ligase	unknown	unknown	gnl\|CDD\|237050
NC_020509.1\|WP_001125545.1\|141021_141216_+\|50S-ribosomal-protein-L35	unknown	unknown	gnl\|CDD\|234676
NC_020509.1\|WP_015428569.1\|124921_125497_-\|nucleotide-exchange-factor-GrpE	unknown	unknown	gnl\|CDD\|184538

Protein	Function_ID	Function_description	E-value
NC_020509.1\|WP_015428574.1\|133373_134300_+\|radical-SAM-protein	gnl\|CDD\|223803	COG0731, COG0731, Fe-S oxidoreductases [Energy production and conversion].	4.07918e-88
NC_020509.1\|WP_015428582.1\|145642_147010_-\|L-serine-ammonia-lyase	gnl\|CDD\|273233	TIGR00720, hypothetical_protein_NEICINOT_00681, L-serine dehydratase, iron-sulfur-dependent, single chain form. This enzyme is also called serine deaminase and L-serine dehydratase 1. L-serine ammonia-lyase converts serine into pyruvate in the gluconeogenesis pathway from serine. This enzyme is comprised of a single chain in Escherichia coli, Mycobacterium tuberculosis, and several other species, but has separate alpha and beta chains in Bacillus subtilis and related species. The beta and alpha chains are homologous to the N-terminal and C-terminal regions, respectively, but are rather deeply branched in a UPGMA tree. This enzyme requires iron and dithiothreitol for activation in vitro, and is a predicted 4Fe-4S protein. Escherichia coli Pseudomonas aeruginosa have two copies of this protein. [Energy metabolism, Amino acids and amines, Energy metabolism, Glycolysis/gluconeogenesis].	0
NC_020509.1\|WP_038419362.1\|126547_127186_+\|class-II-aldolase/adducin-family-protein	gnl\|CDD\|180279	PRK05834, PRK05834, hypothetical protein; Provisional.	1.24115e-108
NC_020509.1\|WP_015428578.1\|141310_141661_+\|50S-ribosomal-protein-L20	gnl\|CDD\|179959	PRK05185, rplT, 50S ribosomal protein L20; Provisional.	6.36986e-61
NC_020509.1\|WP_015428583.1\|147009_148251_-\|HAAAP-family-serine/threonine-permease	gnl\|CDD\|273283	TIGR00814, membrane_transport_protein_YhjV, serine transporter. The Hydroxy/Aromatic Amino Acid Permease (HAAAP) Family- serine/threonine subfamily (TC 2.A.42.2) The HAAAP family includes well characterized aromatic amino acid:H+ symport permeases and hydroxy amino acid permeases. This subfamily is specific for hydroxy amino acid transporters and includes the serine permease, SdaC, of E. coli, and the threonine permease, TdcC, of E. coli.//added GO terms, none avaialbelf or ser/thr specifically [SS 2/6/05] [Transport and binding proteins, Amino acids, peptides and amines].	1.89853e-177
NC_020509.1\|WP_015428567.1\|121857_122775_-\|cysteine-synthase-family-protein	gnl\|CDD\|107204	cd01561, CBS_like, CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase. CBS is a unique heme-containing enzyme that catalyzes a pyridoxal 5'-phosphate (PLP)-dependent condensation of serine and homocysteine to give cystathionine. Deficiency of CBS leads to homocystinuria, an inherited disease of sulfur metabolism characterized by increased levels of the toxic metabolite homocysteine. Cysteine synthase on the other hand catalyzes the last step of cysteine biosynthesis. This subgroup also includes an O-Phosphoserine sulfhydrylase found in hyperthermophilic archaea which produces L-cysteine from sulfide and the more thermostable O-phospho-L-serine.	6.0002e-139
NC_020509.1\|WP_015428580.1\|143077_143509_+\|DUF1104-domain-containing-protein	gnl\|CDD\|368949	pfam06518, DUF1104, Protein of unknown function (DUF1104). This family consists of several hypothetical proteins of unknown function which appear to be found largely in Helicobacter pylori.	3.3595e-24
NC_020509.1\|WP_000009993.1\|129460_131005_-\|flagellin-B	gnl\|CDD\|237440	PRK13588, PRK13588, flagellin B; Provisional.	0
NC_020509.1\|WP_015428577.1\|138594_140433_+\|threonine--tRNA-ligase	gnl\|CDD\|237050	PRK12305, thrS, threonyl-tRNA synthetase; Reviewed.	0
NC_020509.1\|WP_015428579.1\|141860_142721_+\|outer-membrane-protein	gnl\|CDD\|280099	pfam01856, HP_OMP, Helicobacter outer membrane protein. This family seems confined to Helicobacter. It is predicted to be an outer membrane protein based on its pattern of alternating hydrophobic amino acids similar to porins.	1.96937e-49
NC_020509.1\|WP_000089218.1\|140429_141041_+\|translation-initiation-factor-IF-3	gnl\|CDD\|129272	TIGR00168, Translation_initiation_factor_IF-3, translation initiation factor IF-3. infC uses abnormal initiation codons such as AUA, AUC, and CUG which render its expression particularly sensitive to excess of its gene product IF-3 thereby regulating its own expression [Protein synthesis, Translation factors].	1.96689e-75
NC_020509.1\|WP_015428573.1\|131170_133381_+\|type-I-DNA-topoisomerase	gnl\|CDD\|235516	PRK05582, PRK05582, type I DNA topoisomerase.	0
NC_020509.1\|WP_041199901.1\|127514_129398_-\|motility-associated-factor-glycosyltransferase-family-protein	gnl\|CDD\|225324	COG2604, COG2604, Uncharacterized protein conserved in bacteria [Function unknown].	0
NC_020509.1\|WP_015428570.1\|125496_126327_-\|HrcA-family-transcriptional-regulator	gnl\|CDD\|235174	PRK03911, PRK03911, HrcA family transcriptional regulator.	4.82448e-122
NC_020509.1\|WP_015428568.1\|123028_124891_-\|molecular-chaperone-DnaK	gnl\|CDD\|234715	PRK00290, dnaK, molecular chaperone DnaK; Provisional.	0
NC_020509.1\|WP_015428576.1\|135797_138236_-\|pyruvate,-water-dikinase	gnl\|CDD\|235809	PRK06464, PRK06464, phosphoenolpyruvate synthase; Validated.	0
NC_020509.1\|WP_001125545.1\|141021_141216_+\|50S-ribosomal-protein-L35	gnl\|CDD\|234676	PRK00172, rpmI, 50S ribosomal protein L35; Reviewed.	1.08326e-15
NC_020509.1\|WP_015428569.1\|124921_125497_-\|nucleotide-exchange-factor-GrpE	gnl\|CDD\|184538	PRK14149, PRK14149, heat shock protein GrpE; Provisional.	5.45356e-104

>NC_020509.1|WP_015428574.1|133373_134300_+|radical-SAM-protein
MAKENLPVVFGPVLSRRFGKSLGVDLSPSKKQCNYNCIYCELGKAKPIERMEEVVKVETLISAIQNALNNLTTPIDVLTITANGEPTLYPHLLELIQSIKPFLKGVKTLILSNGSLFYEPKVQQALKEFDIVKFSLDAIDLKAFERVDKPYSKDIDKILEGILSFSQIYQGQLVAEVLLIKGVNDSANNLKRIADFLKKINVARVDLSTIDRPSSFKAPKLSEDELLKCSLFFEGLCVSLPKRSIAQAKKLISCGIDELLALISKRPLSAEEAPLILDPNTFKHLETLLNHKQITIKKVGSLEFYCAF
>NC_020509.1|WP_015428573.1|131170_133381_+|type-I-DNA-topoisomerase
MKHLIIVESPAKAKTIKNFLDKNYEVIASKGHVRDLSKFALGIKIDETGFTPNYVVDKDHKELVKQIIELSKKASTTYIATDEDREGEAIGYHVACLIGGKLENYPRIVFHEITQNAILNALKTPRQIDMSKVNAQQARRFLDRIVGFKLSSLISSKITKGLSAGRVQSAALKLVIDKEREIKAFKPLTYFTLDAYFEPHLEAQLISYKGNKLKAQELIDKKEAQEIKNELEKESYTISSIIKKSKKSPTPPPFMTSTLQQSASSLLGFSPTKTMSIAQKLYEGVATPQGVMGVITYMRTDSLNIAKEALEEARNKILKDYGKDYLPPKAKVYSSKNKNAQEAHEAIRPTSIILEPNALKDYLKPEELKLYTLIYKRFLASQMQDALFESQSVVVACEKGEFKSSGRKLLFDGYYKILGNDDKDKLLPNLKENDPIKLEKLESNAHVTEPPARYSEASLIKVLESLGIGRPSTYAPTISLLQNRDYIKVEKKQISALESAFKVIEILEKHFEEIVDSKFSASLEEELDNIAQNKADYQQVLKDFYYPFMDKIEAGKKNIISQKVHEKTGQSCPKCGGELVKKNSRYGEFIACNNYPKCKYVKQTENTNDGFKQELCEKCGGEMVQKFSRNGAFLACNNYPECKNTKSLKNTPNANEIIEGVKCPECGGDIALKRSKKGSFYGCNNYPKCRFLSNHKPINKRCEKCHYLMSERIYRKKKAHECIQCKECVFLEEDDG
>NC_020509.1|WP_000009993.1|129460_131005_-|flagellin-B
MSFRINTNIAALTSHAVGVQNNRDLSSSLEKLSSGLRINKAADDSSGMAIADSLRSQSANLGQAIRNANDAIGMVQTADKAMDEQIKILDTIKTKAVQAAQDGQTLESRKALQSDIQRLLEELDNIANTTSFNGQQMLSGSFSNKEFQIGAYSNTTVKASIGSTSSDKIGHVRMETSSFSAEGMLASAAAQNLTEVGLNFKQVNGVNDYKIETVRISTSAGTGIGALSEIINRFSNTLGVRASYNVMATGGTPVQSGTVKDLTINGVEIGTVNDVHKNDADGRLINAINSVKDRTGVEASLDIQGRINLHSIDGRAISVHATSASGQVFGGGNFAGISGTQHAVIGRLTLTRTDARDIIVSGVNFSHVGFHSAQGVAEYTVNLRAVRGIFDANVASAAGANANGAQAETNSQGIGAGVTSLKGAMIVMDMADSARTQLDKIRSDMGSVQMELVTTINNISVTQVNVKAAESQIRDVDFAEESANFSKYNILAQSGSFAMAQANAVQQNVLRLLQ
>NC_020509.1|WP_041199901.1|127514_129398_-|motility-associated-factor-glycosyltransferase-family-protein
MDIYQKNLQALSKKDPLLFAQLKAIKENKKYEVFLGNDSANFNLLDKETNTPLFEKGPLDSSLELYKNSEIYMLYPYLYYFGLGNGVFYRLLLGNENLKRLVVIEPEIEVIFIVLNLLDFSTEILENRLILLHAAFCHYNMIASLFDMDKKSRLYARMYDLKLFNAYYERYSHQMIEINQHFTRALEHGAISVGNDAKDALIGIKQHASNLPEVIKSPSLVDFVSALKNRDTAIIVSTGPSLNKQLPLLKEVAPYATLFCIDASFPILAKAGIKPDIVLSLERVDLTAKFYEETPLDFQEGVIFALTSIVHKRLIQAIKKGVKQFSFRPFGYTNLFGLHQYGYVGIGMSAANMAYELVVHSRFKRCVFIGQDLSFSQSGNSHASGAIYGDREIKPKKDKDKIFTEKYGGNGEVETTLVWKLFLEFFEKDIFNTPYKLEVINATEGGARIKGTKEMPFKEVCEKIDKSKPKPPINLTYPTQSEQAKNLRIAKQKCEEIIQYANEKKTQVEEVFLKVAPFLEEVEKLHEEKKLEELDFKKLENLSTEIDNIKELFDDKQFNSYFMDAIQSYIFHQELHIAEIVCKKTNNEDELRAKQLEYIYAHKYWLFSLAGGIDCVIEAIKMALKEW
>NC_020509.1|WP_015428571.1|127206_127503_+|hypothetical-protein
MTINTHYTPNFTQLQTLNNINNDATIKDRNQVEQDLQQSNIQDGFSQDNTQNAPDFDRLQALNAINNDGEIKDKSQVAKNLVGGENTPEIYSSLDTYA
>NC_020509.1|WP_038419362.1|126547_127186_+|class-II-aldolase/adducin-family-protein
MPSMNTHTRGIDSNLILSLQSISLSMFRKGFFGLYQGSISARIGTNQFVINKRNAVFDQLNENTLLVLHDKIDYRWKEASLDSPIHASVYREFLDAKFIAYARPPYSLAYSLRHNRLLPRDYLGYRSLGEEISIFNPKDYDSWQERADTEILRQLQESKKYFVFIKGCGIFAYHRELSKLMEIFDLIENSCKVLRLGDLMDYCYNDDPRLSV
>NC_020509.1|WP_015428570.1|125496_126327_-|HrcA-family-transcriptional-regulator
MVIDEIFQIMMLRRIKVGSNLNKKESLLDAFVKTYLQILEPISSKRLKELTNLKISCATIRNYFQTLSKEGMLYQAHSSGARLPTFKAFENYWQKSLRFEVLKVNEKRLKSASENFGLFTLLKKPSLERLERVIECEKRFLILDFLAFSCAMSYSVKMEKFLLELVGRSVKEVRSIAASVNALSLARQLERLEYSNTQITRFNLMGLKTLLNSPLFFDILGGKVLERLKKGLHFIEPDCMLVTRPIEFQNKQMQLLCVGKLECDYEGFFQTISKEE
>NC_020509.1|WP_015428569.1|124921_125497_-|nucleotide-exchange-factor-GrpE
MKDGHNQEHDHLSQKEPESCKKACACNEQQGEEIQEASEKECEIKEDFELKYQEMREKYLRVHADFENVKKRLERDKSMALEYAYEKIALDLLPVIDALLGAHRSAIEVDKESALTKGLELTMEKLHEVLARHGIEGIECLEEFDPNFHNAIMQVKSEEKENGKIVQVLQQGYKYKGRVLRPAMVSIAKND
>NC_020509.1|WP_015428568.1|123028_124891_-|molecular-chaperone-DnaK
MGKVIGIDLGTTNSAMAVYEGNEAKIIANKEGKNTTPSIVAFTDKGEILVGESAKRQAVTNPEKTIYSIKRIMGLMFNEDKAKEAEKRLPYKIVDRNGACAIEISGKVYTPQEISAKILMKLKEDAESYLGESVTEAVITVPAYFNDSQRKATKEAGTIAGLNVLRIINEPTSAALAYGLDKKESEKIMVYDLGGGTFDVTVLETGDNVVEVLATGGDAFLGGDDFDNRVIDFLALEFKSETGIEIKNDVMALQRLKEAAENAKKELSSAMETEINLPFITADATGPKHLVKKLTRAKFESLTEDLVEETISKIESVIKDAGLTKNEISEVVMVGGSTRIPKVQERVKAFINKELNKSVNPDEVVAVGASIQGGVLKGDVKDVLLLDVTPLSLGIETLGGVMTKVIDRGTTIPAKKSQVFSTAEDNQPAVSIMVLQGERELARDNKSLGKFDLQGIAPAPRGVPQIEVTFDIDANGILTVSAQDKNTGKSQEIKISGSSGLSDSEIEKMVKDAELHKEEDARKKEVIEARNHADSLAHQTQKSLDEHKANLNENDANEIQNAINALKECVKNDNATKAELEDKTKLLAQAAQKLGEAMANKNNAEQPKKKDDDVIDAEVE
>NC_020509.1|WP_015428567.1|121857_122775_-|cysteine-synthase-family-protein
MIITTMQDAIGRTPVFKFTSKDYPIPTKSAIYAKLEHLNPGGSIKDRLGQYLIEEGFRTGKITSKTTIIEPTAGNTGIALALVALKHHLKTIFVVPEKFSTEKQQIMRALGAKVINTPTSEGILGAIKKSKELAESIPDSYLPLQFENPNNPAAYYHTLAPEIVQELGTGLTSFVAGIGSGGTFAGTARYLKERIPAIRLIGVEPEGSILNGGEPGPHEIEGIGVEFIPPFFANLDIDGFETISDEEGFSYTRELAKKNGLLVGSSSGAAFVAALKEVQRLPEGSQVLTIFPDVADRYLSKGIYL
>NC_020509.1|WP_015428576.1|135797_138236_-|pyruvate,-water-dikinase
MRYIKFFKELNNKNVNLVGGKNASIGEMFQELVPIGIKVPDGFAITSEAYWYLLEQGGAKQKIIELLENVDATEIDVLKIRSKQIRELIFGTPFPSDLRDEIFQAYEILSQQYHMKEADVAVRSSATAEDLPDASFAGQQDTYLNIKGKTELIHYIKSCLASLFTDRAISYRASRGFDHLKVALSVGVQKMVRADKGSAGVMFSIDTETGFKDAVFITSAWGLGENVVGGTINPDEFYVFKPTLEQNKRPIIKRQLGNKTQKMVYAPRGSEHPTRNIKTTKKEWQSFSLSDEDVLILAKYAIEIEKHYSKEAKQYRPMDIEWAKDGDSGEIFIVQARPETVQSQKTKEESQVFEKFKFKNPNEKKEIILQGRAIGSKIGSGKVRIINDLEHMNSFKEGEILVTDNTDPDWEPCMKKASAVITNRGGRTCHAAIVAREIGVPAIVGVSGATDSLYTGMEITVSCAEGEEGYVYAGIYEHEIERVELSNMQETQTKIYINIGNPEKAFGFSQLPNHGVGLARMEMIILNQIKAHPLALVDLHHKKSVKEKNEIENLMAGYANPKDFFVKKIAEGIGMISAAFYPKPVIVRTSDFKSNEYMRMLGGSSYEPNEENPMLGYRGASRYYSESYNEAFSWECEALALVREEMGLTNMKVMIPFLRTIEEGKKVLEILRKNNLESGKNGLEIYIMCELPVNVILADDFLSLFDGFSIGSNDLTQLTLGVDRDSELVSHVFDERNEAMLKMFKKAIEACKRHNKYCGICGQAPSDYPEVTEFLVKEGITSISLNPDSVIPTWNAVAKLEKELKDHGLTTH
>NC_020509.1|WP_015428577.1|138594_140433_+|threonine--tRNA-ligase
MSAELIAVYKDEQIIDLESAKVLGLSDGIKALNGTEPIYFDDSPLALEVIRHSCAHLLAQSLKALYPDAKFFVGPVVEEGFYYDFKTASKISEEDLPKIEAKMKEFAKLKLAITKEVLTREQALERFKGDELKHAVMSKISGDAFGVYQQGEFEDLCKGPHLPNTRFLNHFKLTKLAGAYLGGDENNEMLIRIYGIAFATKEGLKDYLFQIEEAKKRDHRKLGVELELFSFDDEIGAGLPLWLPKGARLRKRIEDLLSKALLLRGYEPVKGPEILKSDVWKISGHYDNYKENMYFTTIDEQEYGIKPMNCVGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDAHIFCSFEQIQSEVSAILDFTHKIMQAFDFNYEMELSTRPAKSIGDDKVWEKATNALKEALKEHRIDYKIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDMNLPERFKLAFTNEHNHAEQPVMIHRAILGSFERFIAILSEHFGGNFPFFVAPTQIALIPINEEHHVFALKLKEALKKHDIFVEVLDKNDSLNKKVRSAEKQKIPMILVLGNEEVETEILSIRDREKQAQYKMPLKEFLNMVESKMQEVSF
>NC_020509.1|WP_000089218.1|140429_141041_+|translation-initiation-factor-IF-3
MSRNEVLLNGDINFKEVRCVGDNGEVYGIISSKEALNIAQNLGLDLVLISASAKPPVCKVMDYNKFRYQNEKKIKEAKKKQKQIEIKEIKLSTQIAQNDINYKVKHAREFIESNKHVKFKVVLKGRESQNSKAGLDVLFRVQTMMQDLANPEKEPKTEGRFVSWMFVPKAKEAPKNEKKTKENNPPFNRINLMKGEDHAKNED
>NC_020509.1|WP_001125545.1|141021_141216_+|50S-ribosomal-protein-L35
MPKMKTNRGASKRFKVKKNLIKRGSAFKSHILTKKSPKRKANLNAPKHVHHTNVHSVMSLLCRA
>NC_020509.1|WP_015428578.1|141310_141661_+|50S-ribosomal-protein-L20
MRVKTGVVRRRRHKKILKLARGFYSGRRKHFRKAKEQLERSMYYAFRDRKQKKREFRSLWVVRINAACRMHNTSYSRFMHALKVAGVELDRKVLADMAMNDMQAFESVLESVKEHL
>NC_020509.1|WP_015428579.1|141860_142721_+|outer-membrane-protein
MKKSVIVGAISLAMTSLLSAETPKQEKAIKTSPTKKGERNAAFIGIDYQLGMLSTTAQNCSHGNCNGNQSGAYGSNTPNMPTASNPTGGLTHGALGTRGYKGLSNQQYAINGFGFVVGYKHFFKKSPQFGMRYYGFFDFASSYYKYYTYNDYGMRDARKGSQSFMFGYGAGTDVLFNPAIFNRENLHFGFFVGVAIGGTSWGPTNYYFKDLADEYKGSFHPSNFQVLVNGGIRLGTKHQGFEIGLKIQTIRNNYYTASADNVPEGTTYRFTFHRPYAFYWRYIVSF
>NC_020509.1|WP_015428580.1|143077_143509_+|DUF1104-domain-containing-protein
MKKLAFSLLFTGTFLGLFLNASDFKSMDNKQLLEQAGKVAPSEVPEFRAEVNKRLATMKEEERKNYKADFKKAMDKNLASLSQEDRNKRKKEILEVIANKKKTMTMKEYRQMGLDLHDCACEDPFHDHEKKGKKGKKPSHHQH
>NC_020509.1|WP_015428581.1|143914_144784_+|hypothetical-protein
MKRILFFLVATTFLLRAETDSATINTTIDPNVMFSESSTGNVKKDRKRVLKSMVNLEKERVKNFNQYSETKMSKGDLSAFGAFFKGSLESCVDQKICYYEHKNGKVSFVVNDREKFYKHVLKDLGTELSLPLFNWLYKGSDFGALHEQFGDMYDGYIKYLISMVRISQKEKARKLDAVTLKKMEDQAEKDTKAAFQKRSSGELESHTDSPEFISSSKKTQNASNPDLDSTTNANALKETASKEPEISSKKEKKSKKKRRLSKKEKQQQALQQEFEKQISDSSKSENIAK
>NC_020509.1|WP_015428582.1|145642_147010_-|L-serine-ammonia-lyase
MASFSILSIFKIGVGPSSSHTIGPMEAGARFCGLLKGVLDQVMRVQITLHGSLALTGKGHLSDEAVLIGLHGIYANELELTTKKALLHEALENKVLKLANQHCIHFDYSKDLIFDNKPLSRHQNALILKAFNAKNEVLKEETYYSVGGGFVYTEKELDNLSEEGGNESVAYDFSSAKELLELCQKHQKNIAEIVRLREEAMKNRPDAMMAKIYHAMLECYDNGANSKEKYLPGSLRVTRLAPSIKTRLEKHPTSGKDPLALIDYISLYARAIAEENASGGKVVTAPTNGACAVVPSVLLYAKNHLFENLSQKAINDFLLTSAAIGYLYKKNASLSGAEAGCQAEIGVASSMAAGGLACLCQASTQQVLIASEIAMEHHLGLTCDPVGGLVQIPCIERNVLGAIKAISASKLALEDEYKPKVSLDEVIATMYATGKDMNEKYKETSLGGLAKTLKC
>NC_020509.1|WP_015428583.1|147009_148251_-|HAAAP-family-serine/threonine-permease
MAQEKALIRDPKKLNAFDLRWMASLFGTAVGAGILFLPIRAGGHGVWAIVVMSAIIFPLTYLGHRALAYFIGSKDKEDITMVVRSHFGAQWGFLITLLYFFAIYPICLAYGVGITNVFDHFFTNQLHLVPFHRGLLAVALVSLMMLVMVFNATIVTRICNALVYPLCLILLLFSLYLIPYWQGANLFVMPSFKEFVLAIWLTLPVLVFSFNHSPIISTFTQNVEKEYGAFKEYKLNQIELGTSLMLLGFVMFFVFSCVMCLNADDFAKAREQNIPILSYFANTLNNPLINYAGPVVAFLAIFSSFFGHYYGAKEGLEGIIIQSLKLKKTSKTLSVSVTIFLWLTITLVAYINPNILDFIENLGGPIIALILFVMPMIAFYSVSSLKRFRNLKVDIFVFVFGSLTALSVFLGLF

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Crispr_ID: NC_020509_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_020509_2

935649-935851

Orphan

Consensus_repeat	Method
AACAGCAATTTCAATCAAGGGACTTA	CRISPRCasFinder

3 spacers

The CRISPR arrays of NC_020509_2

>merge|NC_020509|2|935649-935851|CRISPRCasFinder
AAAACGAACTTCAATCAAGGGACTTACAAATTCACTAACAGCGCTAACTTAAACTTCAACAACAGCAATTTCAATCAAGGGACTTACAACTTTAGTAGCGCTCAATCTGCTTTTGAAAACAGCAATTTCAATCAAGGCACTTATAGCTTTACTGACAATACAGGTTTAAACTTTGATAACGACACCTTCAATCAAGGCACTTA

>NC_020509|2|2|935649-935851|CRISPRCasFinder
AAAACGAACTTCAATCAAGGGACTTA	CAAATTCACTAACAGCGCTAACTTAAACTTCAAC
AACAGCAATTTCAATCAAGGGACTTA	CAACTTTAGTAGCGCTCAATCTGCTTTTGAA
AACAGCAATTTCAATCAAGGCACTTA	TAGCTTTACTGACAATACAGGTTTAAACTTTGAT
AACGACACCTTCAATCAAGGCACTTA

Protein	Signature genes	Signature genes Name	Protein_function
NC_020509.1\|WP_015429155.1\|933805_934801_+\|type-I-glyceraldehyde-3-phosphate-dehydrogenase	unknown	unknown	gnl\|CDD\|273675
NC_020509.1\|WP_015429150.1\|922617_924210_+\|Hop-family-adhesin-AlpB	unknown	unknown	gnl\|CDD\|280099
NC_020509.1\|WP_015429160.1\|949203_949806_+\|6-pyruvoyl-tetrahydropterin-synthase-family-protein	unknown	unknown	gnl\|CDD\|223792
NC_020509.1\|WP_162470977.1\|945323_946274_+\|zinc-metalloprotease-HtpX	unknown	unknown	gnl\|CDD\|235081
NC_020509.1\|WP_015429158.1\|946274_946817_+\|GTP-cyclohydrolase-I-FolE	unknown	unknown	gnl\|CDD\|129173
NC_020509.1\|WP_015428824.1\|942126_943227_+\|Hop-family-outer-membrane-protein-HopJ/HopK	unknown	unknown	gnl\|CDD\|280099
NC_020509.1\|WP_001240253.1\|932969_933662_-\|Bax-inhibitor-1/YccA-family-protein	unknown	unknown	gnl\|CDD\|198414
NC_020509.1\|WP_001115888.1\|943279_943486_-\|4-oxalocrotonate-tautomerase-family-protein	unknown	unknown	gnl\|CDD\|129125
NC_020509.1\|WP_015429152.1\|926557_928999_-\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|273808
NC_020509.1\|WP_041199931.1\|917040_918180_+\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|223897
NC_020509.1\|WP_015429157.1\|944209_945355_+\|tRNA-pseudouridine(13)-synthase-TruD	unknown	unknown	gnl\|CDD\|272903
NC_020509.1\|WP_015429154.1\|929612_932870_-\|carbamoyl-phosphate-synthase-large-subunit	unknown	unknown	gnl\|CDD\|235393
NC_020509.1\|WP_015429153.1\|929176_929608_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376519
NC_020509.1\|WP_015429151.1\|924756_926301_-\|outer-membrane-beta-barrel-protein-HofG	unknown	unknown	gnl\|CDD\|334957
NC_020509.1\|WP_015429159.1\|946832_947744_+\|polyprenyl-synthetase-family-protein	unknown	unknown	gnl\|CDD\|223220
NC_020509.1\|WP_015429148.1\|918195_920226_+\|ATP-dependent-helicase	unknown	unknown	gnl\|CDD\|223288
NC_020509.1\|WP_000041797.1\|948540_949200_+\|hypothetical-protein	unknown	unknown	unknown
NC_020509.1\|WP_001099598.1\|943631_944213_+\|recombination-protein-RecR	unknown	unknown	gnl\|CDD\|273176
NC_020509.1\|WP_015429149.1\|921042_922596_+\|Hop-family-adhesin-AlpA	unknown	unknown	gnl\|CDD\|280099
NC_020509.1\|WP_000722456.1\|947740_948544_+\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732

Protein	Function_ID	Function_description	E-value
NC_020509.1\|WP_015429155.1\|933805_934801_+\|type-I-glyceraldehyde-3-phosphate-dehydrogenase	gnl\|CDD\|273675	TIGR01534, Glyceraldehyde-3-phosphate_dehydrogenase, glyceraldehyde-3-phosphate dehydrogenase, type I. This model represents glyceraldehyde-3-phosphate dehydrogenase (GAPDH), the enzyme responsible for the interconversion of 1,3-diphosphoglycerate and glyceraldehyde-3-phosphate, a central step in glycolysis and gluconeogenesis. Forms exist which utilize NAD (EC 1.2.1.12), NADP (EC 1.2.1.13) or either (1.2.1.59). In some species, NAD- and NADP- utilizing forms exist, generally being responsible for reactions in the anabolic and catabolic directions respectively. Two Pfam models cover the two functional domains of this protein; pfam00044 represents the N-terminal NAD(P)-binding domain and pfam02800 represents the C-terminal catalytic domain. An additional form of gap gene is found in gamma proteobacteria and is responsible for the conversion of erythrose-4-phosphate (E4P) to 4-phospho-erythronate in the biosynthesis of pyridoxine. This pathway of pyridoxine biosynthesis appears to be limited, however, to a relatively small number of bacterial species although it is prevalent among the gamma-proteobacteria. This enzyme is described by TIGR001532. These sequences generally score between trusted and noise to this GAPDH model due to the close evolutionary relationship. There exists the possiblity that some forms of GAPDH may be bifunctional and act on E4P in species which make pyridoxine and via hydroxythreonine and lack a separate E4PDH enzyme (for instance, the GAPDH from Bacillus stearothermophilus has been shown to posess a limited E4PD activity as well as a robust GAPDH activity). There are a great number of sequences in the databases which score between trusted and noise to this model, nearly all of them due to fragmentary sequences. It seems that study of this gene has been carried out in many species utilizing PCR probes which exclude the extreme ends of the consenses used to define this model. The noise level is set relative not to E4PD, but the next closest outliers, the class II GAPDH's (found in archaea, TIGR01546) and aspartate semialdehyde dehydrogenase (ASADH, TIGR01296) both of which have highest-scoring hits around -225 to the prior model. [Energy metabolism, Glycolysis/gluconeogenesis].	1.29167e-158
NC_020509.1\|WP_015429150.1\|922617_924210_+\|Hop-family-adhesin-AlpB	gnl\|CDD\|280099	pfam01856, HP_OMP, Helicobacter outer membrane protein. This family seems confined to Helicobacter. It is predicted to be an outer membrane protein based on its pattern of alternating hydrophobic amino acids similar to porins.	8.17015e-53
NC_020509.1\|WP_015429160.1\|949203_949806_+\|6-pyruvoyl-tetrahydropterin-synthase-family-protein	gnl\|CDD\|223792	COG0720, COG0720, 6-pyruvoyl-tetrahydropterin synthase [Coenzyme metabolism].	1.68812e-21
NC_020509.1\|WP_162470977.1\|945323_946274_+\|zinc-metalloprotease-HtpX	gnl\|CDD\|235081	PRK02870, PRK02870, heat shock protein HtpX; Provisional.	0
NC_020509.1\|WP_015429158.1\|946274_946817_+\|GTP-cyclohydrolase-I-FolE	gnl\|CDD\|129173	TIGR00063, GTP_cyclohydrolase_1, GTP cyclohydrolase I. alternate names: Punch (Drosophila),GTP cyclohydrolase I (EC 3.5.4.16) catalyzes the biosynthesis of formic acid and dihydroneopterin triphosphate from GTP. This reaction is the first step in the biosynthesis of tetrahydrofolate in prokaryotes, of tetrahydrobiopterin in vertebrates, and of pteridine-containing pigments in insects. [Biosynthesis of cofactors, prosthetic groups, and carriers, Folic acid].	6.10478e-104
NC_020509.1\|WP_015428824.1\|942126_943227_+\|Hop-family-outer-membrane-protein-HopJ/HopK	gnl\|CDD\|280099	pfam01856, HP_OMP, Helicobacter outer membrane protein. This family seems confined to Helicobacter. It is predicted to be an outer membrane protein based on its pattern of alternating hydrophobic amino acids similar to porins.	6.37452e-46
NC_020509.1\|WP_001240253.1\|932969_933662_-\|Bax-inhibitor-1/YccA-family-protein	gnl\|CDD\|198414	cd10432, BI-1-like_bacterial, Bacterial BAX inhibitor (BI)-1/YccA-like proteins. This family is comprised of bacterial relatives of the mammalian members of the BAX inhibitor (BI)-1 like family of small transmembrane proteins, which have been shown to have an antiapoptotic effect either by stimulating the antiapoptotic function of Bcl-2, a well-characterized oncogene, or by inhibiting the proapoptotic effect of Bax, another member of the Bcl-2 family. In plants, BI-1 like proteins play a role in pathogen resistance. A characterized prokaryotic member, Escherichia coli YccA, has been shown to interact with ATP-dependent protease FtsH, which degrades abnormal membrane proteins as part of a quality control mechanism to keep the integrity of biological membranes.	1.09145e-52
NC_020509.1\|WP_001115888.1\|943279_943486_-\|4-oxalocrotonate-tautomerase-family-protein	gnl\|CDD\|129125	TIGR00013, Probable_tautomerase_K2, 4-oxalocrotonate tautomerase family enzyme. 4-oxalocrotonate tautomerase is a homohexamer in which each monomer is very small, at about 62 amino acids. Pro-1 of the mature protein serves as a general base. The enzyme functions in meta-cleavage pathways of aromatic hydrocarbon catabolism. Because several Arg residues located near the active site in the crystal structure of Pseudomonas putida are not conserved among all members of this family, because the literature describes a general role in the isomerization of beta,gamma-unsaturated enones to their alpha,beta-isomers, and because of the presence of fairly distantly related paralogs in Campylobacter jejuni, the family is regarded as not necessarily uniform in function. [Energy metabolism, Other].	4.5194e-26
NC_020509.1\|WP_015429152.1\|926557_928999_-\|TonB-dependent-receptor	gnl\|CDD\|273808	TIGR01786, hemoglobin-haptoglobin-binding_protein, TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein. This model represents a family of TonB-dependent outer membrane receptor/transporters acting on iron-containing proteins such as hemoglobin, transferrin and lactoferrin. Two subfamily models with a narrower scope are contained within this model, the heme/hemoglobin receptor family protein model (TIGR01785) and the transferrin/lactoferrin receptor family model (TIGR01776). Accessions which score above trusted to this model while not scoring above trusted to the more specific models are most likely to be hemoglobin transporters. Nearly all of the species containing trusted hits to this model have access to hemoglobin, transferrin or lactoferrin or related proteins in their biological niche. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins].	2.32529e-43
NC_020509.1\|WP_041199931.1\|917040_918180_+\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|223897	COG0827, COG0827, Adenine-specific DNA methylase [DNA replication, recombination, and repair].	4.0838e-52
NC_020509.1\|WP_015429157.1\|944209_945355_+\|tRNA-pseudouridine(13)-synthase-TruD	gnl\|CDD\|272903	TIGR00094, tRNA_pseudouridine_synthase_D, tRNA pseudouridine synthase, TruD family. an EGAD loading error caused one member to be called surE, but that's an adjacent gene. MJ11364 is a strong partial match from 50 to 230 aa. [Protein synthesis, tRNA and rRNA base modification].	4.92791e-139
NC_020509.1\|WP_015429154.1\|929612_932870_-\|carbamoyl-phosphate-synthase-large-subunit	gnl\|CDD\|235393	PRK05294, carB, carbamoyl-phosphate synthase large subunit.	0
NC_020509.1\|WP_015429153.1\|929176_929608_-\|hypothetical-protein	gnl\|CDD\|376519	pfam01300, Sua5_yciO_yrdC, Telomere recombination. This domain has been shown to bind preferentially to dsRNA. The domain is found in SUA5 as well as HypF and YrdC. It has also been shown to be required for telomere recombniation in yeast.	9.60777e-05
NC_020509.1\|WP_015429151.1\|924756_926301_-\|outer-membrane-beta-barrel-protein-HofG	gnl\|CDD\|334957	pfam02521, HP_OMP_2, Putative outer membrane protein. This family consists of putative outer membrane proteins from Helicobacter pylori (campylobacter pylori).	3.95574e-179
NC_020509.1\|WP_015429159.1\|946832_947744_+\|polyprenyl-synthetase-family-protein	gnl\|CDD\|223220	COG0142, IspA, Geranylgeranyl pyrophosphate synthase [Coenzyme metabolism].	1.10874e-75
NC_020509.1\|WP_015429148.1\|918195_920226_+\|ATP-dependent-helicase	gnl\|CDD\|223288	COG0210, UvrD, Superfamily I DNA and RNA helicases [DNA replication, recombination, and repair].	3.62297e-134
NC_020509.1\|WP_001099598.1\|943631_944213_+\|recombination-protein-RecR	gnl\|CDD\|273176	TIGR00615, Recombination_protein_RecR, recombination protein RecR. All proteins in this family for which functions are known are involved in the initiation of recombination and recombinational repair. RecF is also required. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair].	4.16127e-98
NC_020509.1\|WP_015429149.1\|921042_922596_+\|Hop-family-adhesin-AlpA	gnl\|CDD\|280099	pfam01856, HP_OMP, Helicobacter outer membrane protein. This family seems confined to Helicobacter. It is predicted to be an outer membrane protein based on its pattern of alternating hydrophobic amino acids similar to porins.	1.62272e-54
NC_020509.1\|WP_000722456.1\|947740_948544_+\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	4.42832e-126

>NC_020509.1|WP_015429155.1|933805_934801_+|type-I-glyceraldehyde-3-phosphate-dehydrogenase
MKIFINGFGRIGRCVLRAILERSDNPQLEVIGINDPANWEILAYLLEHDSAHGLLNKETRYSNHKLIIGSLEIPVFNSIKDLRGVDVIIECSGKFLEPKTLENYLLLGAKKVLLSAPFMGEYDEKQYPTLVYGVNHSLYQNQAIVSNASCTTNAIAPICAILDKAFGIKEGMLTTIHSYTSDQRLIDLAHPLDKRRSRAAASNIIPTTTKAALALHKVLPNLKNKMHGHSVRVPSLDVSMIDLSLFLEKKAPKDPINDLLVEASKGVLKGVLEIDLKERVSSDFISNPSSVIIALDLTFTLENMVKIMGWYDNEWGYSHRLVDMAQFMYHY
>NC_020509.1|WP_001240253.1|932969_933662_-|Bax-inhibitor-1/YccA-family-protein
MALYDRANSHNAYAENSLLHESELVGFVKTTYKFFAGSLLLATIGALLGLMNFQAVVQYKWVFFIAEIAALFGLMFSKSKPGLNLFMLFAFTSLSGVTLVPLLGMVIAKAGLGAIWQALGMTTIVFGLMSVYALKTKNDLANMGKMLFIALIVVVVCSLINLFLGSPMFQVVIAGASAILFSLYIAYDTQNIVKGMYDSPIDAAVSLYLDFLNVFISILQIIGIFSDRDK
>NC_020509.1|WP_015429154.1|929612_932870_-|carbamoyl-phosphate-synthase-large-subunit
MPKRTDISNILLIGSGPIVIGQACEFDYSGTQSCKTLKSLGYRVILINSNPATVMTDPEFSHQTYIQPITPENIAAIIKKEKIDAILPTMGGQTALNAVMQMHQKGMLEGVELLGAKIEAIKKGEDRQAFKEAMLKIGMDLPRGRYAYSELEALEAINEIGFPAIIRASFTLAGGGSGVAYNIEEFQELAKNALDASPINEILIEESLLGWKEYEMEVIRDSKDNCIIVCCIENIDPMGVHTGDSITIAPSLTLTDKEYQRMRDASFAILREIGVDTGGSNVQFAIHPETLRMVVIEMNPRVSRSSALASKATGFPIAKVATMLAVGFSLDEIQNDITNTPASFEPSLDYIVVKIPRFAFEKFAGVSSTLGTSMKSIGEVMAIGGNFLEALQKALCSLENNWLGFESLSKDLEIIKKEIRRPNFKRLLYIADAFRLGVCVDEVFELCQIDRWFLSQIQKLVKAEESINSSVLTDAKKLRGLKNLGFSDARIAAKIKENENLEVSPFEVELARMNLQIAPNFEEVDTCAAEFLSLTPYLYSTYAPNPLPPIENKQEKKEKKILIIGSGPNRIGQGIEFDYCCVHASFALKDLNIKSVMLNCNPETVSTDYDTSDTLYFEPIHFECVKSIIQREHVDGVIVHFGGQTPLKLAKDLAKMQAPIIGTPFKVIDIAEDREKFSLFLKELDIKQPENGMAKSVDEAYSIANVIGFPIIVRPSYVLGGQHMQILENIEELHHYLESVTHALEISPKNPLLIDKFLEKAVELDVDAICDKKEVYIAGILQHIEEAGIHSGDSACFIPSTLSPKILDEIERVSAKIALHLGVVGLLNIQFAVHHNTLYLIEVNPRASRTVPFLSKALGVPLAKVATRVMVLKDLKEALKFYDKKNIVGYSKGVYKPKMPHFVALKEAVFPFNKLYGSDLILGPEMKSTGEVMGIARTLGLAFFKAQTACFNPIKNKGLIFVSIKDKDKEEACVLMKRLVQLGFELCATEGTHKALEKAGVESLKVLKISEGRPNVMDLMMNGEISMAINTSDHKSQDDAKLIRASVLKNHVSYFTTLSAIEVLILALEESSKEDELLALQDYLK
>NC_020509.1|WP_015429153.1|929176_929608_-|hypothetical-protein
MALVYLAQSDTTIGLLSKDSEKLNALKNRPKNQSVLIESADFTTLKSLVRAPNAFKNLIRRSAKTTFIYPNSKAVRVVRGRHGDFLKRFKTLYSTSANLTQCAYDKEIASKLADVIVSDERGLFESSSSKIFRLYKGKKVRVR
>NC_020509.1|WP_015429152.1|926557_928999_-|TonB-dependent-receptor
MNDKRFRKYWSFSLFLSLLGMFELEAKEEEKEERKTERKKDQKKNAQHTLGKVTTQAAKIFNYNNQTTISSKELERRQANQISDMFRRNPNINVGGGAVIAQKIYVRGIEDRLARVTVDGAAQMGASYGHQGNTIIDPGMLKSVVVTKGAAQASAGPMALIGAIKMETRSASDFIPKGKDYAMSGAVTFLTNFGDRETVMGAYRNNHFDMLLYYTHQNIFYYRDGDNATKDLFRPKADNKVTGSPSEQNNVMAKINGYLSERDTLNLSYNMTRDNANRPLRANFTGTFLPYSCGDFNAFPNEKNPSDCLFENDASLFKTYSVNLVHNVSLNYEREGGSRFGDPKLKINGYTSIRNVQIDPLFRPNDIAAIIPFTPNPELGGENECVAQGGIYDAVKQTCSITFKSLGGGSVVANKNLFIINSGFNANVIHTIDHKNDNLFEYGLNYQNLTTFDKAIPNSELVKPGDAPDACLRVTGPNDPNINGRCQRNGATANVIGVYAQANYTLHPMVTLGAGTRYDVYTLVDKDWQLHITQGFSPSAALNVSPLENLNFRLSYAYVTRGPMPGGLVWMRQDNLRYNRNLKPEIGQNVEFNTEYSSKYFDFRAAGFVQLISNYINQFSSTLFVTNLPAQDIIYVPGYEVSGTAKYKGFSLGLSVARSWPSLKGRLIADVYELAATTGNVFILTASYTIPRTGLSITWLSRFVTDLSYCSYSPYRNGPTDIDRRPSNCPKTPGIFYVHKPGYGVSSFFVTYKPTYKKLEGLSLNAVFNNVFNQQYIDQASPVMSPDEPNQDKYARGMAEPGFNARFEISYKF
>NC_020509.1|WP_015429151.1|924756_926301_-|outer-membrane-beta-barrel-protein-HofG
MRQEKYFLTSSLSLLSFLLCPAEAFDYRFSGRVENFSKIGFNNSQINTKKGIYPTESFIDIVTLAQVKVNLLPKGTENHRLSFSLGGAIAAIPYDKTKNDINQANGKIFGSIVENFIGGYHGYFFNKYLGPAYAGTSQSASYHARPYVVDTAFLRYDYKDVFGFKAGRYEANIDFMSGSNQGWEVYYQPYKTETQRLRFWWWSSFGRGLAFNSWIYEFFATVPYLKKGGNPSNSNDFINYGWHGITTTYSYKGLDAQFFYYFAPKTYNAPGFKLVYDTNRNFENVGFRSQSMIMTTFPLYYRGWYNPETKTYSLEDSTPHGSLLGRNGVTLNIRQVFWWDNFNWSIGFYNTFGNSDAFLGSHTMPRGNNTSYISNEISVTTRHAGMIGYDFWDNTAYDGLADAITNANTFTFYTSVGGIHKRFAWHVFGRISHANKNALGQLGRANEYSLQFNASYAFTESVFLNFRITYYGARINKGYQVGYFGAPKFNNPDGDFSANYQDRSYMMTNLTLKF
>NC_020509.1|WP_015429150.1|922617_924210_+|Hop-family-adhesin-AlpB
MKQNLKPFKMIKENLMTQSQKVRFLAPLSLALSLSFNQVGAEEDGGFMTFGYELGQVVQQVKNPGKIKAEELAGLLNSTTTNNTNINIAGTGGNVAGTLGNLFMNQLGNLIDLYPTLNTSSIHQCGATNSGSSGSTAATTGSPSNSSCFQGNLSLYNEMVSSIKTLSQDLKNNIFQGNNNTTSANLSNQLSELNTASVYLTYMNSFLNANNQAGGIFQNNTNQTYGSGVTAQQIAYVLKQASVTMGPSGNGGAAGAFLDAALAQHVFNSANAGNDLSAKEFTSLVQNIVDTSQNALTLANNANISNSTGYQVSYGGNIDQARSTQLLNNTTNTLAKVAALNNELKANPWLGNFAAGNSSQVNAFNGFITKIGYKQFFGENKNVGLRYYGFFSYNGAGVGNGPTYNQVNLLTYGVGTDVLYNVFSRSFGSRSLNAGFFGGIQLAGDTYISTLRNSPQLASRPTATKFQFLFDVGLRMNFGILKKDLKSHNQHSIEIGVQVPTIYNTYYKTGGAEVKYYRPYSVYWVYGYAF
>NC_020509.1|WP_015429149.1|921042_922596_+|Hop-family-adhesin-AlpA
MIKKNRTLFLSLALCASISYAEDDGGFFTVGYQLGQVMQDVQNPGGTKRDELARELNADVTNNILNNNTGGNVAGALSNAFSQYLYSLLGAYPEKLNGNDVSANALLGGAVGSGTCAAAGTAGGNSLTTQSACTAAGYYWLPSLSNRVLSTIGSQTNYGTNTNFPNMQQQLTYLNAANVFFNAMNKALETKNGASGTSGVTGSNGQTYSEQAIQYLRGQQNILNNAANLLKQDELLLEAFNSAVAANIGNKEFNSAVFTGLVQGIIDQSQSVYNELSKNPISGSAFNSATNSQLTNQANAVQGRANQLPNALYNAQVTLDKINALNNQVRSMPYLPQFRAGNSRATNILNGFYTKVGYKQFFGKKRNIGLRYYGFFSYNGASVGFRSTQNNVGLYTYGVGTDVLYNIFSRSYQNRSVDMGFFSGIQLAGETFQSTLRDDPNVKLHGKINNTHFQFLFDFGMRMNFGKLDGKSNRHNQHTVEFGVVVPTIYNTYYKSAGTTVKYFRPYSVYWSYGYSF
>NC_020509.1|WP_015429148.1|918195_920226_+|ATP-dependent-helicase
MLETLQLNPEQLKAAKALKGYNLVIASAGTGKTSTIVGRILYLLDNGIKPEEILLLTFTNKASNEMIARVAKYSKTSSKIEAGTFHAVAYRYLKEHYPNLSLKQPKELKKLLESIVDTKNALTDDDKKPYTSQHLYALYSLYTNALKQEDFSAWLSNKNPEHTPYAAFYENILDEFENTKKKHNYIDYNDLLLLFKQAMLERPSPYKEVLCDEFQDTNPLQESILDAINPPSLFCVGDYDQSIYAFNGADISIISNFTQKYKNAQVFTLTKNYRSSKEILDLANQVIQHNERIYPKNLEVVKSGHFNKPALLNYSDNIAQCQDIAKRIVMRKNFKEVAVIFRNNASADQLEAALRSHNVPSKRKGSASFFESKEVALALDICALIFNPKDIMAAIHVLSHISDIGSNTAKDIHEALMLLGNGDLKSALIQPNKETKIYTKKKEITSMGLFEEIFALENSSRFNSVIDKAFHSHPVLMHPKISLNGAKMLSDFFILYTKAPTHSPRALIKHILESAFFQTFKTRLLKERSKNKDGSYNEFKKLQAQKRFHEKMDLLSSLAKNYQNLGRFLNGTLIGSSEATQGEGVNLLSVHASKGLEFKDVYIIDLMEGRFPNHKLMNTGGGIEEERRLFYVAITRAKENLWLSYAKNELRENAKPKEHKPSVFLYEAGLLKPDLK
>NC_020509.1|WP_041199931.1|917040_918180_+|class-I-SAM-dependent-methyltransferase
MENFLNNLDIKTLGQVFTPKNIVDFMLTLKHNHGSVLEPSAGDGSFLKRLKKAVGIEIDPKICPKNALCMDFFDYPLENQFDTIIGNPPYVKHKDIAPSTKEKLHYSLFDERSNLYLFFIEKAIKHLKPKGELIFITPRDFLKSTSSVKLNEWIYKEGTITHFFELGDQKVFPNAMPNCVIFRFCKGNFSRIANDCLQFLCKKGILYFLNQSYTQKLSEVFKVKVGAVSGCDKIFKNEKYGNLEFVTSITKRTNVLEKMVFVNKPNDYLLQHKDSLMQRKIKKFNEANWFEWGRMHHISPKKRIYVNTKTRQKNPFFIHQCPNYDGSILALFPYNQNLDLQNLCDKLNAINWQELGFVCDGRFLFSQRSLENALLPKDF
>NC_020509.1|WP_015428824.1|942126_943227_+|Hop-family-outer-membrane-protein-HopJ/HopK
MQKTLFSFLSLPLFLSFCIAEENGAYASVGFEYSISHAIQHNNPFLNQERIQIISNAQNKIYKLNQVKNEITSMPKTFAYINNNLKNHSQLTPTEMQAEKYYLQSTFQNIEKIITLSGGVASNPQLVQALEKIQEPTTNPLEFEENLKNLEVQFNQSQNRMLSSLSSQIAQISNSLNALDPSSYSKNISNMYGVTLNVGYKHFFTKKKNQGFRYYLFYDYGYTNFGFVGNGFDGLGKMNNHLYGLGIDYLYNFIDNSQKHSSVGFYAGFALAGSSWVGSGLSMWVSETDFINNYLTGYQAKMHTSFFQIPLNFGVRVNVNRHNGFEMGLKIPLAVNSFYETHGKGLNTSLFFKRLVVFNVSYVYSF
>NC_020509.1|WP_001115888.1|943279_943486_-|4-oxalocrotonate-tautomerase-family-protein
MPFINIKLVPENGGPTNEQKQQLIEGVSDLMVKVLNKNKASVVVIIDEVDSNNYGLGGESVHHLRQKN
>NC_020509.1|WP_001099598.1|943631_944213_+|recombination-protein-RecR
MNTYKNSLNHFLNLVDCLEKIPNVGKKSAFKMAYHLGLENPYLALKITHALENALENLKTCASCNALSESEVCEICSDESRQNSQLCMVLHPRDVFILEDLKDFLGRYYVLNSIEEVDFNALEKRLIEENIKEIIFAFPPTLANDSLMLYIEDKLQHFHLTFTKIAQGVPTGVNFENIDSVSLSRAFNSRIKA
>NC_020509.1|WP_015429157.1|944209_945355_+|tRNA-pseudouridine(13)-synthase-TruD
MNLNFMPLLHAYNHASIDFHFNSSARDFCVHEVPLYEFSNTGEHAVIQVRKSGLSTLEMLQVFSQILGVRIAELGYAGLKDKNALTTQYISLPKKYAPLLEKNTHNLQERNLKILSLNYHHNKIKLGHLKGNRFFMRFKKMTPLNAQKTEQVLEQIVQFGMPNYFGPQRFGKFNDNHQEGLKILQNQTKFAHQKLNAFLISSYQSYLFNALLSKRLEISKIISAFSLKENLEFFKQKNLNINPNTLKALKNQAHPFKILEGDVMCHYPYGKFFDALELEKESERFLKKEAAPTGLLDGKKALYAKNLSLEIEKEFQHNLLNSHAKTLGSRRFFWVFAENITSQYVKEKAQFELGFYLPKGSYASALLKEIKHEKGENNDEF
>NC_020509.1|WP_162470977.1|945323_946274_+|zinc-metalloprotease-HtpX
MRKEKIMTNFEKIIAQNRLKTNAVLATYCVIFAFIGLLVDVIRINANDLGIALFKLMTFQIFPTITMIMFLVAFVIIVVCIQNFSSIMLSGDEYKLIDSSKVLSSKENQIYRLLLELLEEAKLHFEPKLYIIKAPYMNAFASGWNESNSLIALTSALIERLDRDELKAVIAHELSHIRHNDIRLTMCVGILSNIMLLAANFSVYFFMGNRKNSGANLARMILLVLQIILPFLTLLLQMYLSRTREYMADSGAAFLMHDNKPMIRALQKISNDYKENDYKDADTNSTRSAAYLFSAEMFSTHPSIENRIQSLSRRVI
>NC_020509.1|WP_015429158.1|946274_946817_+|GTP-cyclohydrolase-I-FolE
MENFFNQFFENIGEDKNREGLKETPKRVQELWKFLYKGYKEDPRVALKSAYFQGVCDEMIVAQNIEFYSTCEHHLLPFLGNISLGYIPKEKIVGISAIAKLIEIYSRRLQIQERLTTQIAETFDEIIEPRGVIVICEAKHLCMSMQGVQKQNVIIKTSVLKGLFKKDPKTRAEFIQLLKS
>NC_020509.1|WP_015429159.1|946832_947744_+|polyprenyl-synthetase-family-protein
MNNPNLSFYYNECERFESFLNHHHLHLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGKKDYSNQQTEYFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSFELLSNSLLESHIIVELIKILSANGGIKGMVLGQALDCYFENTPLNLEQLTFLHEHKTAKLISASLMMGLVASGIKDEELFKWLQAFGLKMGLCFQVLDDIIDVTQDEEESGKTTHLDGVKNSFVNLLGLEKASGYAQTLKTEVLDDLNLLKPAYPLLQENLNALLNTLFKGKT
>NC_020509.1|WP_000722456.1|947740_948544_+|5'/3'-nucleotidase-SurE
MKKILLTNDDGYHAKGIKALEQALEEMAEIYVVAPKHEKSACSQCITITAPLRAEKIKGKEGRHYRIDDGTPSDCVYLAINELFKHVCFDLVISGINLGSNMGEDTIYSGTVAGAIEGTIQGVPSIAISQILSNKNKNTPLSFDLAQKIIQDLVQNIFTNGYPLKGRKLLNVNVPNCSLQEYKGECITPKGYRLYKKEVHKRTDPKNESYFWLGLHPLEWQKRENEDRLSDFDAIASNHVSITPLNLDLTSYDDLKNLESWHKGMLK
>NC_020509.1|WP_000041797.1|948540_949200_+|hypothetical-protein
MSKNHRLAFLGLIVGVLFFFSACQHRLHMGYYSEVTGDYLFNYNSTIVVAYDRSDAMTSYYINVIVYELQKLGFYNVFTQAEFPLDKAKNVIYARIVRNISAVPFYQYNYQLIDQVNKPCYFLGGQFYCSQTPTDYYAINGFSEQILMSANSHFILDWYDVVLQKRVLYVDGSVSGRTCGYQMLYRDLIKSTIKRIDFNRPERYYYNLRLPLYQPCYRE
>NC_020509.1|WP_015429160.1|949203_949806_+|6-pyruvoyl-tetrahydropterin-synthase-family-protein
MVIRRLYQFCASHVVRNCSSLKCAQNIHGHNYEVEVFIETNRLDNANMALDFGLMQQEMQVFIESFDHAHHFWDKESDEFQRFIENHCVRYVKCSFNLSAESYALMFLYYLTRILQKSVFSNDEGELKISSVRVHETKNGYAESFLKDLENPHFKSLVHNHCVSFSQGIQSLWHDKDFFNKIISDEKQCFFHAKPLHQIP

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	NC_020509.1	135100-135127	2	0.929

1. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to position: 135100-135127, mismatch: 2, identity: 0.929

tttttgtttttcttgttctgttttctgt	CRISPR spacer
tttttgtttttcttgttctgtcttttgt	Protospacer
*********************.**.***

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	NZ_CP019918	Borreliella burgdorferi strain PAbe plasmid p_cp32-5-1, complete sequence	20481-20508	3	0.893
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	NZ_CP019918	Borreliella burgdorferi strain PAbe plasmid p_cp32-5-1, complete sequence	51224-51251	3	0.893
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	NC_000948	Borreliella burgdorferi B31 plasmid cp32-1, complete sequence	27272-27299	3	0.893
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	NC_000953	Borreliella burgdorferi B31 plasmid cp32-8, complete sequence	27407-27434	3	0.893
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	NZ_CP019846	Borreliella burgdorferi plasmid cp32-1, complete sequence	27248-27275	3	0.893
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	NZ_CP019849	Borreliella burgdorferi plasmid cp32-5, complete sequence	27196-27223	3	0.893
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	NZ_CP019756	Borreliella burgdorferi strain B31_NRZ isolate B31 plasmid p_cp32-1_1, complete sequence	27197-27224	3	0.893
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	NZ_CP019756	Borreliella burgdorferi strain B31_NRZ isolate B31 plasmid p_cp32-1_1, complete sequence	57940-57967	3	0.893
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	NZ_CP030046	Enterococcus faecalis strain C54 plasmid pC54, complete sequence	26261-26288	3	0.893
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	NC_018979	Borrelia burgdorferi 297 plasmid 297_cp32-12, complete sequence	27344-27371	4	0.857
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	NC_018981	Borrelia burgdorferi 297 plasmid 297_cp32-5, complete sequence	27185-27212	4	0.857
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	NC_019003	Borrelia burgdorferi 297 plasmid 297_cp32-1, complete sequence	27451-27478	4	0.857
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	MN693011	Marine virus AFVG_117M58, complete genome	42494-42521	4	0.857
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	KX119177	Helicobacter phage SwA626G, complete genome	7846-7873	4	0.857
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	NZ_CP013848	Clostridium botulinum strain Af650 plasmid pRSJ14_1, complete sequence	19034-19061	4	0.857
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	MG649966	Vibrio virus Ceto, complete genome	72538-72565	5	0.821
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	NC_042094	Vibrio phage Ceto, complete genome	72538-72565	5	0.821
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	NZ_CP007453	Peptoclostridium acidaminophilum DSM 3953 strain al-2 plasmid EAL2_808p, complete sequence	746219-746246	5	0.821
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	KT345706	Vibrio phage vB_VorS-PVo5, complete genome	3117-3144	5	0.821
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	NZ_CP031899	Escherichia coli O113:H21 strain FWSEC0010 plasmid unnamed1, complete sequence	38845-38872	5	0.821
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	NZ_CP028382	Escherichia coli strain RM10466 plasmid pRM10466-1, complete sequence	117776-117803	5	0.821
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	NZ_CP027441	Escherichia coli strain 2012C-4502 plasmid unnamed, complete sequence	54657-54684	5	0.821
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	NZ_CP027372	Escherichia coli strain 2015C-3905 plasmid unnamed	59642-59669	5	0.821
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	NC_007365	Escherichia coli EH41 plasmid pO113, complete sequence	123821-123848	5	0.821
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	NZ_CP024291	Escherichia coli O178:H19 strain 2012C-4431 plasmid unnamed2, complete sequence	34562-34589	5	0.821
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	KM983328	Clostridium phage phiCT453B, complete genome	32388-32415	5	0.821
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	MH648920	Microviridae sp. isolate cthi004, complete genome	3998-4025	5	0.821
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	MN694392	Marine virus AFVG_250M8, complete genome	25571-25598	5	0.821
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	NZ_CP027585	Escherichia coli strain 00-3076 plasmid unnamed, complete sequence	50665-50692	5	0.821
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	NZ_CP027451	Escherichia coli strain 2014C-3097 plasmid unnamed2, complete sequence	53900-53927	5	0.821
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	MN694558	Marine virus AFVG_250M9, complete genome	14015-14042	5	0.821
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	MN694640	Marine virus AFVG_250M10, complete genome	14023-14050	5	0.821
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	NC_049857	Lactococcus phage P1048, complete genome	14007-14034	5	0.821
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	DQ222855	Bacillus anthracis phage Gamma isolate 53, complete genome	27056-27083	5	0.821
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	DQ289555	Bacillus anthracis phage W Beta, complete genome	29856-29883	5	0.821
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	NC_007814	Bacillus phage Fah, complete genome	29663-29690	5	0.821
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	DQ150593	Bacillus anthracis bacteriophage Fah, complete sequence	29663-29690	5	0.821
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	DQ222853	Bacillus anthracis phage Gamma isolate 51, complete genome	27695-27722	5	0.821
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	DQ221100	Bacteriophage gamma putative terminase small subunit, putative terminase large subunit, putative portal protein, putative prohead protease, putative phage structural protein, putative DNA packaging protein, putative head-tail adaptor, phage related proteins, putative major tail protein, phage related protein, putative tail tape measure protein, phage related protein, putative minor structural protein, putative holin, N-acetylmuramoyl-L-alanine amidase (PlyG), putative lipoprotein, putative transcriptional regulator, conserved hypothetical proteins, FtsK/SpoIIIE family protein, phage related protein, conserved hypothetical protein, putative transcriptional regulator, putative site-specific recombinase, conserved hypothetical protein, putative transcriptional regulators, putative antirepressor, conserved hypothetical protein, putative DNA replication proteins, conserved hypothetical protein, phage related proteins, conserved hypothetical protein, putative transglycosylase, and putative endonuclease genes, complete cds	29663-29690	5	0.821
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	DQ221100	Bacteriophage gamma putative terminase small subunit, putative terminase large subunit, putative portal protein, putative prohead protease, putative phage structural protein, putative DNA packaging protein, putative head-tail adaptor, phage related proteins, putative major tail protein, phage related protein, putative tail tape measure protein, phage related protein, putative minor structural protein, putative holin, N-acetylmuramoyl-L-alanine amidase (PlyG), putative lipoprotein, putative transcriptional regulator, conserved hypothetical proteins, FtsK/SpoIIIE family protein, phage related protein, conserved hypothetical protein, putative transcriptional regulator, putative site-specific recombinase, conserved hypothetical protein, putative transcriptional regulators, putative antirepressor, conserved hypothetical protein, putative DNA replication proteins, conserved hypothetical protein, phage related proteins, conserved hypothetical protein, putative transglycosylase, and putative endonuclease genes, complete cds	29699-29726	5	0.821
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	DQ222851	Bacillus anthracis phage Cherry, complete genome	27057-27084	5	0.821
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	DQ289556	Bacillus anthracis phage Gamma isolate d'Herelle, complete genome	27824-27851	5	0.821
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	NC_007734	Bacillus phage WBeta, complete genome	29856-29883	5	0.821
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	KY963369	Bacillus phage Tavor_SA, complete genome	31225-31252	5	0.821
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	NC_007458	Bacillus phage Gamma, complete genome	27695-27722	5	0.821
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	MN694140	Marine virus AFVG_250M934, complete genome	599-626	5	0.821
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	KX119203	Helicobacter phage PtB89G, complete genome	7673-7700	5	0.821
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	NZ_CP024036	Bacillus aryabhattai strain K13 plasmid unnamed1	45218-45245	6	0.786
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	NZ_CP023318	Bacillus megaterium strain A plasmid p1, complete sequence	55711-55738	6	0.786
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	KF302032	UNVERIFIED: Pseudoalteromonas phage HS5, complete genome	33345-33372	6	0.786
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	HM588722	Pseudoalteromonas phage H105/1, complete genome	23153-23180	6	0.786
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	NZ_CP014118	Staphylococcus epidermidis strain FDAARGOS_153 plasmid unnamed1, complete sequence	17118-17145	6	0.786
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	KF302033	UNVERIFIED: Pseudoalteromonas phage HS1, complete genome	32949-32976	6	0.786
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	NZ_CP015592	Bacillus cereus strain AR156 plasmid pAR460, complete sequence	355566-355593	6	0.786
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	NZ_CP033793	Bacillus sp. FDAARGOS_527 plasmid unnamed6, complete sequence	14569-14596	6	0.786
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	AP014285	Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S24-C125, * SEQUENCING IN PROGRESS *	3556-3583	6	0.786
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	AP013502	Uncultured Mediterranean phage uvMED DNA, complete genome, group G2, isolate: uvMED-CGR-C14A-MedDCM-OCT-S23-C10	26363-26390	6	0.786
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	AP013505	Uncultured Mediterranean phage uvMED DNA, complete genome, group G2, isolate: uvMED-CGR-C14A-MedDCM-OCT-S38-C26	26580-26607	6	0.786
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	AP013504	Uncultured Mediterranean phage uvMED DNA, complete genome, group G2, isolate: uvMED-CGR-C14A-MedDCM-OCT-S34-C29	25322-25349	6	0.786
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	AP013795	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C14A-MedDCM-OCT-S43-C156, * SEQUENCING IN PROGRESS *	9013-9040	6	0.786
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	AP013506	Uncultured Mediterranean phage uvMED DNA, complete genome, group G2, isolate: uvMED-CGR-C14A-MedDCM-OCT-S42-C35	12735-12762	6	0.786
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	AP013786	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C14A-MedDCM-OCT-S31-C108, * SEQUENCING IN PROGRESS *	5206-5233	6	0.786
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	GU943055	Uncultured phage MedDCM-OCT-S04-C26 genomic sequence	24780-24807	6	0.786
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	AP013791	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C14A-MedDCM-OCT-S36-C101, * SEQUENCING IN PROGRESS *	11837-11864	6	0.786
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	LC425524	Uncultured phage DNA, contig: NODE656	5827-5854	6	0.786
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	AP013793	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C14A-MedDCM-OCT-S39-C151, * SEQUENCING IN PROGRESS *	6939-6966	6	0.786
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	AP013787	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C14A-MedDCM-OCT-S32-C104, * SEQUENCING IN PROGRESS *	11837-11864	6	0.786
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	NZ_LR214999	Mycoplasma conjunctivae strain NCTC10147 plasmid 3	59451-59478	6	0.786
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	LR214965	Mycoplasma fermentans strain NCTC10117 genome assembly, plasmid: 11	49043-49070	6	0.786
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	MK449010	Streptococcus phage Javan90, complete genome	1430-1457	6	0.786
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	AP013783	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C14A-MedDCM-OCT-S24-C161, * SEQUENCING IN PROGRESS *	6579-6606	6	0.786
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	MK448798	Streptococcus phage Javan533, complete genome	1434-1461	6	0.786
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	KX011028	Staphylococcus phage pSco-10, complete genome	78754-78781	6	0.786
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	MF775688	Lactococcus phage LP0004b, complete genome	19976-20003	6	0.786
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	MK448681	Streptococcus phage Javan141, complete genome	1432-1459	6	0.786
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	AP014448	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C14A-MedDCM-OCT-S35-C81, * SEQUENCING IN PROGRESS *, 2 ordered pieces	13384-13411	6	0.786
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	AP013794	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C14A-MedDCM-OCT-S41-C142, * SEQUENCING IN PROGRESS *	7352-7379	6	0.786
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	MN871511	UNVERIFIED: Vibrio phage vspsw1, complete genome	103528-103555	6	0.786
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	MF775694	Lactococcus phage LP0212, complete genome	19517-19544	6	0.786
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	MF775696	Lactococcus phage LP0509, complete genome	19517-19544	6	0.786
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	AP013796	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C14A-MedDCM-OCT-S44-C315, * SEQUENCING IN PROGRESS *	593-620	6	0.786
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	MF448557	Lactococcus phage 37201, complete genome	20495-20522	6	0.786
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	NC_013155	Lactococcus phage CB13, complete genome	20020-20047	6	0.786
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	MN871505	UNVERIFIED: Vibrio phage ValDsh2, complete genome	8286-8313	6	0.786
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	KP793102	Lactococcus phage 936 group phage PhiA.16, complete genome	18682-18709	6	0.786
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	MF775701	Lactococcus phage LP1110, complete genome	19517-19544	6	0.786
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	MF775693	Lactococcus phage LP0209, complete genome	19517-19544	6	0.786
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	MN693111	Marine virus AFVG_25M354, complete genome	29951-29978	6	0.786
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	NC_049402	Lactococcus phage 38507, complete genome	18189-18216	6	0.786
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	MF775697	Lactococcus phage LP0604, complete genome	19517-19544	6	0.786
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	MF775699	Lactococcus phage LP1005, complete genome	19516-19543	6	0.786
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	MT442039	Vibrio phage vB_ValS_X1, partial genome	8134-8161	6	0.786
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	MF775700	Lactococcus phage LP1011, complete genome	19517-19544	6	0.786
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	KP793103	Lactococcus phage 936 group phage Phi19, complete genome	18681-18708	6	0.786
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	NC_049423	Lactococcus phage LP0903, complete genome	20003-20030	6	0.786
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	NC_049401	Lactococcus phage 38503, complete genome	16805-16832	6	0.786
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	KP793104	Lactococcus phage 936 group phage PhiB1127, complete genome	18884-18911	6	0.786
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	KP793109	Lactococcus phage 936 group phage PhiC0139, complete genome	18884-18911	6	0.786
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	NC_049414	Lactococcus phage 96403, complete genome	16903-16930	6	0.786
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	AP013503	Uncultured Mediterranean phage uvMED DNA, complete genome, group G2, isolate: uvMED-CGR-C14A-MedDCM-OCT-S29-C22	32253-32280	6	0.786
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	MK301439	Lactococcus phage AV09, complete genome	18682-18709	6	0.786
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	MF775691	Lactococcus phage LP0109, complete genome	19527-19554	6	0.786
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	MN871510	UNVERIFIED: Vibrio phage valsw3, complete genome	92198-92225	6	0.786
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	KP793106	Lactococcus phage 936 group phage PhiA1127, complete genome	19127-19154	6	0.786
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	AP013785	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C14A-MedDCM-OCT-S30-C161, * SEQUENCING IN PROGRESS *	7141-7168	6	0.786
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	AP013789	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C14A-MedDCM-OCT-S33-C266, * SEQUENCING IN PROGRESS *	593-620	6	0.786
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	MK448783	Streptococcus phage Javan503, complete genome	1355-1382	6	0.786
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	MK448967	Streptococcus phage Javan510, complete genome	1434-1461	6	0.786
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	MH925094	UNVERIFIED: Vibrio phage VspSw_1, complete genome	8333-8360	6	0.786
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	KY349816	Streptococcus phage Str01, complete genome	23599-23626	6	0.786
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	NC_049369	Lactococcus phage 936 group phage PhiLj, complete genome	18695-18722	6	0.786
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	MK448833	Streptococcus phage Javan87, complete genome	1430-1457	6	0.786
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	NC_049482	Lactococcus phage CHPC362, complete genome	19002-19029	6	0.786
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	MF775702	Lactococcus phage LP1407, complete genome	19497-19524	6	0.786
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	AP013784	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C14A-MedDCM-OCT-S27-C105, * SEQUENCING IN PROGRESS *	10391-10418	6	0.786
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	NC_004588	Streptococcus prophage 315.5, complete genome	1583-1610	6	0.786
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	MF775695	Lactococcus phage LP0304, complete genome	19517-19544	6	0.786
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	NC_018878	Bacillus thuringiensis Bt407 plasmid BTB_502p, complete sequence	410314-410341	7	0.75
NC_020509_1	1.1\|135226\|28\|NC_020509\|CRISPRCasFinder	135226-135253	28	NZ_CP014848	Bacillus thuringiensis strain HD12 plasmid pHD120017, complete sequence	10847-10874	7	0.75
NC_020509_2	2.2\|935735\|31\|NC_020509\|CRISPRCasFinder	935735-935765	31	NZ_CP018028	Alteromonas mediterranea strain CP49 plasmid MCP49-600, complete sequence	471239-471269	8	0.742
NC_020509_2	2.2\|935735\|31\|NC_020509\|CRISPRCasFinder	935735-935765	31	NZ_CP018025	Alteromonas mediterranea strain CP48 plasmid pAMCP48-600, complete sequence	464647-464677	8	0.742
NC_020509_2	2.3\|935792\|34\|NC_020509\|CRISPRCasFinder	935792-935825	34	NZ_CP046399	Bacillus sp. A260 plasmid unnamed11, complete sequence	13864-13897	11	0.676

1. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to NZ_CP019918 (Borreliella burgdorferi strain PAbe plasmid p_cp32-5-1, complete sequence) position: , mismatch: 3, identity: 0.893

tttttgtttttcttgttctgttttctgt	CRISPR spacer
tttttgtttttcttgttctgcttttcgt	Protospacer
********************.***..**

2. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to NZ_CP019918 (Borreliella burgdorferi strain PAbe plasmid p_cp32-5-1, complete sequence) position: , mismatch: 3, identity: 0.893

tttttgtttttcttgttctgttttctgt	CRISPR spacer
tttttgtttttcttgttctgcttttcgt	Protospacer
********************.***..**

3. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to NC_000948 (Borreliella burgdorferi B31 plasmid cp32-1, complete sequence) position: , mismatch: 3, identity: 0.893

tttttgtttttcttgttctgttttctgt	CRISPR spacer
tttttgtttttcttgttctgcttttcgt	Protospacer
********************.***..**

4. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to NC_000953 (Borreliella burgdorferi B31 plasmid cp32-8, complete sequence) position: , mismatch: 3, identity: 0.893

tttttgtttttcttgttctgttttctgt	CRISPR spacer
tttttgtttttcttgttctgcttttcgt	Protospacer
********************.***..**

5. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to NZ_CP019846 (Borreliella burgdorferi plasmid cp32-1, complete sequence) position: , mismatch: 3, identity: 0.893

tttttgtttttcttgttctgttttctgt	CRISPR spacer
tttttgtttttcttgttctgcttttcgt	Protospacer
********************.***..**

6. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to NZ_CP019849 (Borreliella burgdorferi plasmid cp32-5, complete sequence) position: , mismatch: 3, identity: 0.893

tttttgtttttcttgttctgttttctgt	CRISPR spacer
tttttgtttttcttgttctgcttttcgt	Protospacer
********************.***..**

7. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to NZ_CP019756 (Borreliella burgdorferi strain B31_NRZ isolate B31 plasmid p_cp32-1_1, complete sequence) position: , mismatch: 3, identity: 0.893

tttttgtttttcttgttctgttttctgt	CRISPR spacer
tttttgtttttcttgttctgcttttcgt	Protospacer
********************.***..**

8. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to NZ_CP019756 (Borreliella burgdorferi strain B31_NRZ isolate B31 plasmid p_cp32-1_1, complete sequence) position: , mismatch: 3, identity: 0.893

tttttgtttttcttgttctgttttctgt	CRISPR spacer
tttttgtttttcttgttctgcttttcgt	Protospacer
********************.***..**

9. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to NZ_CP030046 (Enterococcus faecalis strain C54 plasmid pC54, complete sequence) position: , mismatch: 3, identity: 0.893

tttttgtttttcttgttctgttttctgt	CRISPR spacer
tgtttgtttttctggttcttttttctgt	Protospacer
* *********** ***** ********

10. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to NC_018979 (Borrelia burgdorferi 297 plasmid 297_cp32-12, complete sequence) position: , mismatch: 4, identity: 0.857

tttttgtttttcttgttctgttttctgt	CRISPR spacer
tttttgtttttctttttctgcttttcgt	Protospacer
************** *****.***..**

11. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to NC_018981 (Borrelia burgdorferi 297 plasmid 297_cp32-5, complete sequence) position: , mismatch: 4, identity: 0.857

tttttgtttttcttgttctgttttctgt	CRISPR spacer
tttttgtttttctttttctgcttttcgt	Protospacer
************** *****.***..**

12. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to NC_019003 (Borrelia burgdorferi 297 plasmid 297_cp32-1, complete sequence) position: , mismatch: 4, identity: 0.857

tttttgtttttcttgttctgttttctgt	CRISPR spacer
tttttgtttttctttttctgcttttcgt	Protospacer
************** *****.***..**

13. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to MN693011 (Marine virus AFVG_117M58, complete genome) position: , mismatch: 4, identity: 0.857

tttttgtttttcttgttctgttttctgt	CRISPR spacer
ttttggtttttctttttctgtttttttt	Protospacer
**** ********* *********.* *

14. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to KX119177 (Helicobacter phage SwA626G, complete genome) position: , mismatch: 4, identity: 0.857

tttttgtttttcttgttctgttttctgt-	CRISPR spacer
tttttgtttttgttgttcta-tttctatg	Protospacer
*********** *******. *****.*

15. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to NZ_CP013848 (Clostridium botulinum strain Af650 plasmid pRSJ14_1, complete sequence) position: , mismatch: 4, identity: 0.857

tttttgtttttcttgttctgttttctgt-	CRISPR spacer
ttttagtttttcttcttctg-tttctata	Protospacer
**** ********* ***** *****.*

16. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to MG649966 (Vibrio virus Ceto, complete genome) position: , mismatch: 5, identity: 0.821

tttttgtttttcttgttctgttttctgt	CRISPR spacer
attttgttttccttcttctgttttctca	Protospacer
 *********.*** ***********

17. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to NC_042094 (Vibrio phage Ceto, complete genome) position: , mismatch: 5, identity: 0.821

tttttgtttttcttgttctgttttctgt	CRISPR spacer
attttgttttccttcttctgttttctca	Protospacer
 *********.*** ***********

18. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to NZ_CP007453 (Peptoclostridium acidaminophilum DSM 3953 strain al-2 plasmid EAL2_808p, complete sequence) position: , mismatch: 5, identity: 0.821

tttttgtttttcttgttctgttttctgt	CRISPR spacer
tttttgtttttattgttatgttttcgac	Protospacer
*********** ***** ******* ..

19. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to KT345706 (Vibrio phage vB_VorS-PVo5, complete genome) position: , mismatch: 5, identity: 0.821

tttttgtttttcttgttctgttttctgt	CRISPR spacer
attttgttttccttcttctgttttctca	Protospacer
 *********.*** ***********

20. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to NZ_CP031899 (Escherichia coli O113:H21 strain FWSEC0010 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.821

tttttgtttttcttgttctgttttctgt	CRISPR spacer
tttttgtttttctttttttgtttttctt	Protospacer
************** **.******.. *

21. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to NZ_CP028382 (Escherichia coli strain RM10466 plasmid pRM10466-1, complete sequence) position: , mismatch: 5, identity: 0.821

tttttgtttttcttgttctgttttctgt	CRISPR spacer
tttttgtttttctttttttgtttttctt	Protospacer
************** **.******.. *

22. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to NZ_CP027441 (Escherichia coli strain 2012C-4502 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.821

tttttgtttttcttgttctgttttctgt	CRISPR spacer
tttttgtttttctttttttgtttttctt	Protospacer
************** **.******.. *

23. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to NZ_CP027372 (Escherichia coli strain 2015C-3905 plasmid unnamed) position: , mismatch: 5, identity: 0.821

tttttgtttttcttgttctgttttctgt	CRISPR spacer
tttttgtttttctttttttgtttttctt	Protospacer
************** **.******.. *

24. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to NC_007365 (Escherichia coli EH41 plasmid pO113, complete sequence) position: , mismatch: 5, identity: 0.821

tttttgtttttcttgttctgttttctgt	CRISPR spacer
tttttgtttttctttttttgtttttctt	Protospacer
************** **.******.. *

25. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to NZ_CP024291 (Escherichia coli O178:H19 strain 2012C-4431 plasmid unnamed2, complete sequence) position: , mismatch: 5, identity: 0.821

tttttgtttttcttgttctgttttctgt	CRISPR spacer
tttttgtttttctttttttgtttttctt	Protospacer
************** **.******.. *

26. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to KM983328 (Clostridium phage phiCT453B, complete genome) position: , mismatch: 5, identity: 0.821

tttttgtttttcttgttctgttttctgt	CRISPR spacer
attttgtttttcttcttctgttatccat	Protospacer
 ************* ******* **..*

27. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to MH648920 (Microviridae sp. isolate cthi004, complete genome) position: , mismatch: 5, identity: 0.821

tttttgtttttcttgttctgttttctgt	CRISPR spacer
tttttgtttttcttgatctgcttttgat	Protospacer
*************** ****.***. .*

28. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to MN694392 (Marine virus AFVG_250M8, complete genome) position: , mismatch: 5, identity: 0.821

tttttgtttttcttgttctgttttctgt	CRISPR spacer
tttttctttttcttgttttgttttttaa	Protospacer
***** ***********.******.*.

29. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to NZ_CP027585 (Escherichia coli strain 00-3076 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.821

tttttgtttttcttgttctgttttctgt	CRISPR spacer
tttttgtttttctttttttgtttttctt	Protospacer
************** **.******.. *

30. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to NZ_CP027451 (Escherichia coli strain 2014C-3097 plasmid unnamed2, complete sequence) position: , mismatch: 5, identity: 0.821

tttttgtttttcttgttctgttttctgt	CRISPR spacer
tttttgtttttctttttttgtttttctt	Protospacer
************** **.******.. *

31. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to MN694558 (Marine virus AFVG_250M9, complete genome) position: , mismatch: 5, identity: 0.821

tttttgtttttcttgttctgttttctgt	CRISPR spacer
tttttctttttcttgttttgttttttaa	Protospacer
***** ***********.******.*.

32. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to MN694640 (Marine virus AFVG_250M10, complete genome) position: , mismatch: 5, identity: 0.821

tttttgtttttcttgttctgttttctgt	CRISPR spacer
tttttctttttcttgttttgttttttaa	Protospacer
***** ***********.******.*.

33. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to NC_049857 (Lactococcus phage P1048, complete genome) position: , mismatch: 5, identity: 0.821

tttttgtttttcttgttctgttttctgt	CRISPR spacer
tttttgtttttccttttctgttttgttc	Protospacer
************.* ********* * .

34. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to DQ222855 (Bacillus anthracis phage Gamma isolate 53, complete genome) position: , mismatch: 5, identity: 0.821

tttttgtttttcttgttctgttttctgt	CRISPR spacer
tttttgtttttctttttctttttctttt	Protospacer
************** **** ***..* *

35. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to DQ289555 (Bacillus anthracis phage W Beta, complete genome) position: , mismatch: 5, identity: 0.821

tttttgtttttcttgttctgttttctgt	CRISPR spacer
tttttgtttttctttttctttttctttt	Protospacer
************** **** ***..* *

36. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to NC_007814 (Bacillus phage Fah, complete genome) position: , mismatch: 5, identity: 0.821

tttttgtttttcttgttctgttttctgt	CRISPR spacer
tttttgtttttctttttctttttctttt	Protospacer
************** **** ***..* *

37. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to DQ150593 (Bacillus anthracis bacteriophage Fah, complete sequence) position: , mismatch: 5, identity: 0.821

tttttgtttttcttgttctgttttctgt	CRISPR spacer
tttttgtttttctttttctttttctttt	Protospacer
************** **** ***..* *

38. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to DQ222853 (Bacillus anthracis phage Gamma isolate 51, complete genome) position: , mismatch: 5, identity: 0.821

tttttgtttttcttgttctgttttctgt	CRISPR spacer
tttttgtttttctttttctttttctttt	Protospacer
************** **** ***..* *

39. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to DQ221100 (Bacteriophage gamma putative terminase small subunit, putative terminase large subunit, putative portal protein, putative prohead protease, putative phage structural protein, putative DNA packaging protein, putative head-tail adaptor, phage related proteins, putative major tail protein, phage related protein, putative tail tape measure protein, phage related protein, putative minor structural protein, putative holin, N-acetylmuramoyl-L-alanine amidase (PlyG), putative lipoprotein, putative transcriptional regulator, conserved hypothetical proteins, FtsK/SpoIIIE family protein, phage related protein, conserved hypothetical protein, putative transcriptional regulator, putative site-specific recombinase, conserved hypothetical protein, putative transcriptional regulators, putative antirepressor, conserved hypothetical protein, putative DNA replication proteins, conserved hypothetical protein, phage related proteins, conserved hypothetical protein, putative transglycosylase, and putative endonuclease genes, complete cds) position: , mismatch: 5, identity: 0.821

tttttgtttttcttgttctgttttctgt	CRISPR spacer
tttttgtttttctttttctttttctttt	Protospacer
************** **** ***..* *

40. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to DQ221100 (Bacteriophage gamma putative terminase small subunit, putative terminase large subunit, putative portal protein, putative prohead protease, putative phage structural protein, putative DNA packaging protein, putative head-tail adaptor, phage related proteins, putative major tail protein, phage related protein, putative tail tape measure protein, phage related protein, putative minor structural protein, putative holin, N-acetylmuramoyl-L-alanine amidase (PlyG), putative lipoprotein, putative transcriptional regulator, conserved hypothetical proteins, FtsK/SpoIIIE family protein, phage related protein, conserved hypothetical protein, putative transcriptional regulator, putative site-specific recombinase, conserved hypothetical protein, putative transcriptional regulators, putative antirepressor, conserved hypothetical protein, putative DNA replication proteins, conserved hypothetical protein, phage related proteins, conserved hypothetical protein, putative transglycosylase, and putative endonuclease genes, complete cds) position: , mismatch: 5, identity: 0.821

tttttgtttttcttgttctgttttctgt	CRISPR spacer
tttttgtttttctttttctttttctttt	Protospacer
************** **** ***..* *

41. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to DQ222851 (Bacillus anthracis phage Cherry, complete genome) position: , mismatch: 5, identity: 0.821

tttttgtttttcttgttctgttttctgt	CRISPR spacer
tttttgtttttctttttctttttctttt	Protospacer
************** **** ***..* *

42. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to DQ289556 (Bacillus anthracis phage Gamma isolate d'Herelle, complete genome) position: , mismatch: 5, identity: 0.821

tttttgtttttcttgttctgttttctgt	CRISPR spacer
tttttgtttttctttttctttttctttt	Protospacer
************** **** ***..* *

43. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to NC_007734 (Bacillus phage WBeta, complete genome) position: , mismatch: 5, identity: 0.821

tttttgtttttcttgttctgttttctgt	CRISPR spacer
tttttgtttttctttttctttttctttt	Protospacer
************** **** ***..* *

44. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to KY963369 (Bacillus phage Tavor_SA, complete genome) position: , mismatch: 5, identity: 0.821

tttttgtttttcttgttctgttttctgt	CRISPR spacer
tttttctttttcttcttctgtttctttt	Protospacer
***** ******** ********..* *

45. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to NC_007458 (Bacillus phage Gamma, complete genome) position: , mismatch: 5, identity: 0.821

tttttgtttttcttgttctgttttctgt	CRISPR spacer
tttttgtttttctttttctttttctttt	Protospacer
************** **** ***..* *

46. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to MN694140 (Marine virus AFVG_250M934, complete genome) position: , mismatch: 5, identity: 0.821

tttttgtttttcttgttctgttttctgt	CRISPR spacer
tttttgtttttcctgttctttttcccgc	Protospacer
************.****** ***.*.*.

47. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to KX119203 (Helicobacter phage PtB89G, complete genome) position: , mismatch: 5, identity: 0.821

tttttgtttttcttgttctgttttctgt	CRISPR spacer
gttttgtttttcttgttctttgttgttt	Protospacer
 ****************** * ** * *

48. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to NZ_CP024036 (Bacillus aryabhattai strain K13 plasmid unnamed1) position: , mismatch: 6, identity: 0.786

tttttgtttttcttgttctgttttctgt	CRISPR spacer
attttgttttttttgttatgttttcaag	Protospacer
 **********.***** ******* .

49. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to NZ_CP023318 (Bacillus megaterium strain A plasmid p1, complete sequence) position: , mismatch: 6, identity: 0.786

tttttgtttttcttgttctgttttctgt	CRISPR spacer
attttgttttttttgttatgttttcaag	Protospacer
 **********.***** ******* .

50. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to KF302032 (UNVERIFIED: Pseudoalteromonas phage HS5, complete genome) position: , mismatch: 6, identity: 0.786

tttttgtttttcttgttctgttttctgt	CRISPR spacer
tttctgtttttcttattctgtttttcag	Protospacer
***.**********.*********...

51. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to HM588722 (Pseudoalteromonas phage H105/1, complete genome) position: , mismatch: 6, identity: 0.786

tttttgtttttcttgttctgttttctgt	CRISPR spacer
tttctgtttttcttattctgtttttcag	Protospacer
***.**********.*********...

52. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to NZ_CP014118 (Staphylococcus epidermidis strain FDAARGOS_153 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.786

tttttgtttttcttgttctgttttctgt	CRISPR spacer
ttgttgtttttcttgttctgttaaatca	Protospacer
** *******************   *

53. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to KF302033 (UNVERIFIED: Pseudoalteromonas phage HS1, complete genome) position: , mismatch: 6, identity: 0.786

tttttgtttttcttgttctgttttctgt	CRISPR spacer
tttctgtttttcttattctgtttttcag	Protospacer
***.**********.*********...

54. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to NZ_CP015592 (Bacillus cereus strain AR156 plasmid pAR460, complete sequence) position: , mismatch: 6, identity: 0.786

tttttgtttttcttgttctgttttctgt	CRISPR spacer
cttttgtttttcttgttccgcttttttc	Protospacer
.*****************.*.***.* .

55. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to NZ_CP033793 (Bacillus sp. FDAARGOS_527 plasmid unnamed6, complete sequence) position: , mismatch: 6, identity: 0.786

tttttgtttttcttgttctgttttctgt	CRISPR spacer
ttcttctttttcttgttctgtttgattg	Protospacer
**.** *****************  *

56. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to AP014285 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S24-C125, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 6, identity: 0.786

tttttgtttttcttgttctgttttctgt	CRISPR spacer
tttttcttcttcttgttctgtttccata	Protospacer
***** **.**************.*

57. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to AP013502 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G2, isolate: uvMED-CGR-C14A-MedDCM-OCT-S23-C10) position: , mismatch: 6, identity: 0.786

tttttgtttttcttgttctgttttctgt	CRISPR spacer
cagttgttcttcttgttcttttttcttt	Protospacer
.  *****.********** ****** *

58. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to AP013505 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G2, isolate: uvMED-CGR-C14A-MedDCM-OCT-S38-C26) position: , mismatch: 6, identity: 0.786

tttttgtttttcttgttctgttttctgt	CRISPR spacer
cagttgttcttcttgttcttttttcttt	Protospacer
.  *****.********** ****** *

59. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to AP013504 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G2, isolate: uvMED-CGR-C14A-MedDCM-OCT-S34-C29) position: , mismatch: 6, identity: 0.786

tttttgtttttcttgttctgttttctgt	CRISPR spacer
cagttgttcttcttgttcttttttcttt	Protospacer
.  *****.********** ****** *

60. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to AP013795 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C14A-MedDCM-OCT-S43-C156, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 6, identity: 0.786

tttttgtttttcttgttctgttttctgt	CRISPR spacer
cagttgttcttcttgttcttttttcttt	Protospacer
.  *****.********** ****** *

61. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to AP013506 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G2, isolate: uvMED-CGR-C14A-MedDCM-OCT-S42-C35) position: , mismatch: 6, identity: 0.786

tttttgtttttcttgttctgttttctgt	CRISPR spacer
cagttgttcttcttgttcttttttcttt	Protospacer
.  *****.********** ****** *

62. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to AP013786 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C14A-MedDCM-OCT-S31-C108, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 6, identity: 0.786

tttttgtttttcttgttctgttttctgt	CRISPR spacer
cagttgttcttcttgttcttttttcttt	Protospacer
.  *****.********** ****** *

63. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to GU943055 (Uncultured phage MedDCM-OCT-S04-C26 genomic sequence) position: , mismatch: 6, identity: 0.786

tttttgtttttcttgttctgttttctgt	CRISPR spacer
cagttgttcttcttgttcttttttcttt	Protospacer
.  *****.********** ****** *

64. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to AP013791 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C14A-MedDCM-OCT-S36-C101, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 6, identity: 0.786

tttttgtttttcttgttctgttttctgt	CRISPR spacer
cagttgttcttcttgttcttttttcttt	Protospacer
.  *****.********** ****** *

65. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to LC425524 (Uncultured phage DNA, contig: NODE656) position: , mismatch: 6, identity: 0.786

tttttgtttttcttgttctgttttctgt	CRISPR spacer
ccgttgtttttcttgttctattttttct	Protospacer
.. ****************.****.* *

66. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to AP013793 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C14A-MedDCM-OCT-S39-C151, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 6, identity: 0.786

tttttgtttttcttgttctgttttctgt	CRISPR spacer
cagttgttcttcttgttcttttttcttt	Protospacer
.  *****.********** ****** *

67. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to AP013787 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C14A-MedDCM-OCT-S32-C104, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 6, identity: 0.786

tttttgtttttcttgttctgttttctgt	CRISPR spacer
cagttgttcttcttgttcttttttcttt	Protospacer
.  *****.********** ****** *

68. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to NZ_LR214999 (Mycoplasma conjunctivae strain NCTC10147 plasmid 3) position: , mismatch: 6, identity: 0.786

tttttgtttttcttgttctgttttctgt	CRISPR spacer
attttgtttttcttgtttagttttagtt	Protospacer
 ****************. *****   *

69. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to LR214965 (Mycoplasma fermentans strain NCTC10117 genome assembly, plasmid: 11) position: , mismatch: 6, identity: 0.786

tttttgtttttcttgttctgttttctgt	CRISPR spacer
attttgtttttcttgtttagttttagtt	Protospacer
 ****************. *****   *

70. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to MK449010 (Streptococcus phage Javan90, complete genome) position: , mismatch: 6, identity: 0.786

tttttgtttttcttgttctgttttctgt	CRISPR spacer
attttgttttcctttttctgtttttagc	Protospacer
 *********.*** *********. *.

71. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to AP013783 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C14A-MedDCM-OCT-S24-C161, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 6, identity: 0.786

tttttgtttttcttgttctgttttctgt	CRISPR spacer
cagttgttcttcttgttcttttttcttt	Protospacer
.  *****.********** ****** *

72. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to MK448798 (Streptococcus phage Javan533, complete genome) position: , mismatch: 6, identity: 0.786

tttttgtttttcttgttctgttttctgt	CRISPR spacer
attttgttttcctttttctgtttttagc	Protospacer
 *********.*** *********. *.

73. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to KX011028 (Staphylococcus phage pSco-10, complete genome) position: , mismatch: 6, identity: 0.786

tttttgtttttcttgttctgttttctgt	CRISPR spacer
atgttgtttttcttggtctgtttttgat	Protospacer
 * ************ ********. .*

74. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to MF775688 (Lactococcus phage LP0004b, complete genome) position: , mismatch: 6, identity: 0.786

tttttgtttttcttgttctgttttctgt	CRISPR spacer
tttttgtttttcttgctctttttagcat	Protospacer
***************.*** ***  ..*

75. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to MK448681 (Streptococcus phage Javan141, complete genome) position: , mismatch: 6, identity: 0.786

tttttgtttttcttgttctgttttctgt	CRISPR spacer
attttgttttcctttttctgtttttagc	Protospacer
 *********.*** *********. *.

76. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to AP014448 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C14A-MedDCM-OCT-S35-C81, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces) position: , mismatch: 6, identity: 0.786

tttttgtttttcttgttctgttttctgt	CRISPR spacer
cagttgttcttcttgttcttttttcttt	Protospacer
.  *****.********** ****** *

77. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to AP013794 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C14A-MedDCM-OCT-S41-C142, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 6, identity: 0.786

tttttgtttttcttgttctgttttctgt	CRISPR spacer
cagttgttcttcttgttcttttttcttt	Protospacer
.  *****.********** ****** *

78. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to MN871511 (UNVERIFIED: Vibrio phage vspsw1, complete genome) position: , mismatch: 6, identity: 0.786

tttttgtttttcttgttctgttttctgt	CRISPR spacer
tgcttctttttcttgttctgtttgcttg	Protospacer
* .** ***************** **

79. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to MF775694 (Lactococcus phage LP0212, complete genome) position: , mismatch: 6, identity: 0.786

tttttgtttttcttgttctgttttctgt	CRISPR spacer
tttttgtttttcttgctctttttagcat	Protospacer
***************.*** ***  ..*

80. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to MF775696 (Lactococcus phage LP0509, complete genome) position: , mismatch: 6, identity: 0.786

tttttgtttttcttgttctgttttctgt	CRISPR spacer
tttttgtttttcttgctctttttagcat	Protospacer
***************.*** ***  ..*

81. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to AP013796 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C14A-MedDCM-OCT-S44-C315, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 6, identity: 0.786

tttttgtttttcttgttctgttttctgt	CRISPR spacer
cagttgttcttcttgttcttttttcttt	Protospacer
.  *****.********** ****** *

82. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to MF448557 (Lactococcus phage 37201, complete genome) position: , mismatch: 6, identity: 0.786

tttttgtttttcttgttctgttttctgt	CRISPR spacer
tttttgtttttcttgctctttttagcat	Protospacer
***************.*** ***  ..*

83. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to NC_013155 (Lactococcus phage CB13, complete genome) position: , mismatch: 6, identity: 0.786

tttttgtttttcttgttctgttttctgt	CRISPR spacer
tttttgtttttcttgctctttttagcat	Protospacer
***************.*** ***  ..*

84. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to MN871505 (UNVERIFIED: Vibrio phage ValDsh2, complete genome) position: , mismatch: 6, identity: 0.786

tttttgtttttcttgttctgttttctgt	CRISPR spacer
tgcttctttttcttgttctgtttgcttg	Protospacer
* .** ***************** **

85. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to KP793102 (Lactococcus phage 936 group phage PhiA.16, complete genome) position: , mismatch: 6, identity: 0.786

tttttgtttttcttgttctgttttctgt	CRISPR spacer
tttttgtttttcttgctctttttagcat	Protospacer
***************.*** ***  ..*

86. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to MF775701 (Lactococcus phage LP1110, complete genome) position: , mismatch: 6, identity: 0.786

tttttgtttttcttgttctgttttctgt	CRISPR spacer
tttttgtttttcttgctctttttagcat	Protospacer
***************.*** ***  ..*

87. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to MF775693 (Lactococcus phage LP0209, complete genome) position: , mismatch: 6, identity: 0.786

tttttgtttttcttgttctgttttctgt	CRISPR spacer
tttttgtttttcttgctctttttagcat	Protospacer
***************.*** ***  ..*

88. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to MN693111 (Marine virus AFVG_25M354, complete genome) position: , mismatch: 6, identity: 0.786

tttttgtttttcttgttctgttttctgt	CRISPR spacer
tttttgttttttttgttctttttctaat	Protospacer
***********.******* ***.. .*

89. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to NC_049402 (Lactococcus phage 38507, complete genome) position: , mismatch: 6, identity: 0.786

tttttgtttttcttgttctgttttctgt	CRISPR spacer
tttttgtttttcttgctctttttagcat	Protospacer
***************.*** ***  ..*

90. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to MF775697 (Lactococcus phage LP0604, complete genome) position: , mismatch: 6, identity: 0.786

tttttgtttttcttgttctgttttctgt	CRISPR spacer
tttttgtttttcttgctctttttagcat	Protospacer
***************.*** ***  ..*

91. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to MF775699 (Lactococcus phage LP1005, complete genome) position: , mismatch: 6, identity: 0.786

tttttgtttttcttgttctgttttctgt	CRISPR spacer
tttttgtttttcttgctctttttagcat	Protospacer
***************.*** ***  ..*

92. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to MT442039 (Vibrio phage vB_ValS_X1, partial genome) position: , mismatch: 6, identity: 0.786

tttttgtttttcttgttctgttttctgt	CRISPR spacer
tgcttctttttcttgttctgtttgcttg	Protospacer
* .** ***************** **

93. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to MF775700 (Lactococcus phage LP1011, complete genome) position: , mismatch: 6, identity: 0.786

tttttgtttttcttgttctgttttctgt	CRISPR spacer
tttttgtttttcttgctctttttagcat	Protospacer
***************.*** ***  ..*

94. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to KP793103 (Lactococcus phage 936 group phage Phi19, complete genome) position: , mismatch: 6, identity: 0.786

tttttgtttttcttgttctgttttctgt	CRISPR spacer
tttttgtttttcttgctctttttagcat	Protospacer
***************.*** ***  ..*

95. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to NC_049423 (Lactococcus phage LP0903, complete genome) position: , mismatch: 6, identity: 0.786

tttttgtttttcttgttctgttttctgt	CRISPR spacer
tttttgtttttcttgctctttttagcat	Protospacer
***************.*** ***  ..*

96. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to NC_049401 (Lactococcus phage 38503, complete genome) position: , mismatch: 6, identity: 0.786

tttttgtttttcttgttctgttttctgt	CRISPR spacer
tttttgtttttcttgctctttttagcat	Protospacer
***************.*** ***  ..*

97. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to KP793104 (Lactococcus phage 936 group phage PhiB1127, complete genome) position: , mismatch: 6, identity: 0.786

tttttgtttttcttgttctgttttctgt	CRISPR spacer
tttttgtttttcttgctctttttagcat	Protospacer
***************.*** ***  ..*

98. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to KP793109 (Lactococcus phage 936 group phage PhiC0139, complete genome) position: , mismatch: 6, identity: 0.786

tttttgtttttcttgttctgttttctgt	CRISPR spacer
tttttgtttttcttgctctttttagcat	Protospacer
***************.*** ***  ..*

99. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to NC_049414 (Lactococcus phage 96403, complete genome) position: , mismatch: 6, identity: 0.786

tttttgtttttcttgttctgttttctgt	CRISPR spacer
tttttgtttttcttgctctttttagcat	Protospacer
***************.*** ***  ..*

100. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to AP013503 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G2, isolate: uvMED-CGR-C14A-MedDCM-OCT-S29-C22) position: , mismatch: 6, identity: 0.786

tttttgtttttcttgttctgttttctgt	CRISPR spacer
cagttgttcttcttgttcttttttcttt	Protospacer
.  *****.********** ****** *

101. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to MK301439 (Lactococcus phage AV09, complete genome) position: , mismatch: 6, identity: 0.786

tttttgtttttcttgttctgttttctgt	CRISPR spacer
tttttgtttttcttgctctttttagcat	Protospacer
***************.*** ***  ..*

102. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to MF775691 (Lactococcus phage LP0109, complete genome) position: , mismatch: 6, identity: 0.786

tttttgtttttcttgttctgttttctgt	CRISPR spacer
tttttgtttttcttgctctttttagcat	Protospacer
***************.*** ***  ..*

103. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to MN871510 (UNVERIFIED: Vibrio phage valsw3, complete genome) position: , mismatch: 6, identity: 0.786

tttttgtttttcttgttctgttttctgt	CRISPR spacer
tgcttctttttcttgttctgtttgcttg	Protospacer
* .** ***************** **

104. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to KP793106 (Lactococcus phage 936 group phage PhiA1127, complete genome) position: , mismatch: 6, identity: 0.786

tttttgtttttcttgttctgttttctgt	CRISPR spacer
tttttgtttttcttgctctttttagcat	Protospacer
***************.*** ***  ..*

105. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to AP013785 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C14A-MedDCM-OCT-S30-C161, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 6, identity: 0.786

tttttgtttttcttgttctgttttctgt	CRISPR spacer
cagttgttcttcttgttcttttttcttt	Protospacer
.  *****.********** ****** *

106. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to AP013789 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C14A-MedDCM-OCT-S33-C266, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 6, identity: 0.786

tttttgtttttcttgttctgttttctgt	CRISPR spacer
cagttgttcttcttgttcttttttcttt	Protospacer
.  *****.********** ****** *

107. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to MK448783 (Streptococcus phage Javan503, complete genome) position: , mismatch: 6, identity: 0.786

tttttgtttttcttgttctgttttctgt	CRISPR spacer
attttgttttcctttttctgtttttagc	Protospacer
 *********.*** *********. *.

108. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to MK448967 (Streptococcus phage Javan510, complete genome) position: , mismatch: 6, identity: 0.786

tttttgtttttcttgttctgttttctgt	CRISPR spacer
attttgttttcctttttctgtttttagc	Protospacer
 *********.*** *********. *.

109. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to MH925094 (UNVERIFIED: Vibrio phage VspSw_1, complete genome) position: , mismatch: 6, identity: 0.786

tttttgtttttcttgttctgttttctgt	CRISPR spacer
tgcttctttttcttgttctgtttgcttg	Protospacer
* .** ***************** **

110. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to KY349816 (Streptococcus phage Str01, complete genome) position: , mismatch: 6, identity: 0.786

tttttgtttttcttgttctgttttctgt	CRISPR spacer
attttgttttcctttttctgtttttagc	Protospacer
 *********.*** *********. *.

111. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to NC_049369 (Lactococcus phage 936 group phage PhiLj, complete genome) position: , mismatch: 6, identity: 0.786

tttttgtttttcttgttctgttttctgt	CRISPR spacer
tttttgtttttcttgctctttttagcat	Protospacer
***************.*** ***  ..*

112. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to MK448833 (Streptococcus phage Javan87, complete genome) position: , mismatch: 6, identity: 0.786

tttttgtttttcttgttctgttttctgt	CRISPR spacer
attttgttttcctttttctgtttttagc	Protospacer
 *********.*** *********. *.

113. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to NC_049482 (Lactococcus phage CHPC362, complete genome) position: , mismatch: 6, identity: 0.786

tttttgtttttcttgttctgttttctgt	CRISPR spacer
tttttgtttttcttgctctttttagcat	Protospacer
***************.*** ***  ..*

114. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to MF775702 (Lactococcus phage LP1407, complete genome) position: , mismatch: 6, identity: 0.786

tttttgtttttcttgttctgttttctgt	CRISPR spacer
tttttgtttttcttgctctttttagcat	Protospacer
***************.*** ***  ..*

115. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to AP013784 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C14A-MedDCM-OCT-S27-C105, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 6, identity: 0.786

tttttgtttttcttgttctgttttctgt	CRISPR spacer
cagttgttcttcttgttcttttttcttt	Protospacer
.  *****.********** ****** *

116. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to NC_004588 (Streptococcus prophage 315.5, complete genome) position: , mismatch: 6, identity: 0.786

tttttgtttttcttgttctgttttctgt	CRISPR spacer
attttgttttcctttttctgtttttagc	Protospacer
 *********.*** *********. *.

117. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to MF775695 (Lactococcus phage LP0304, complete genome) position: , mismatch: 6, identity: 0.786

tttttgtttttcttgttctgttttctgt	CRISPR spacer
tttttgtttttcttgctctttttagcat	Protospacer
***************.*** ***  ..*

118. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to NC_018878 (Bacillus thuringiensis Bt407 plasmid BTB_502p, complete sequence) position: , mismatch: 7, identity: 0.75

tttttgtttttcttgttctgttttctgt	CRISPR spacer
aatttctttttctttttctgttttcaaa	Protospacer
  *** ******** ********** .

119. spacer 1.1|135226|28|NC_020509|CRISPRCasFinder matches to NZ_CP014848 (Bacillus thuringiensis strain HD12 plasmid pHD120017, complete sequence) position: , mismatch: 7, identity: 0.75

tttttgtttttcttgttctgttttctgt	CRISPR spacer
tttctgtttttcttgttttgtttgaatc	Protospacer
***.*************.*****    .

120. spacer 2.2|935735|31|NC_020509|CRISPRCasFinder matches to NZ_CP018028 (Alteromonas mediterranea strain CP49 plasmid MCP49-600, complete sequence) position: , mismatch: 8, identity: 0.742

caactttagtagcgctcaatctgcttttgaa	CRISPR spacer
ctctctaagtagcgctgactctgcttttgat	Protospacer
*  ..* ********* * ***********

121. spacer 2.2|935735|31|NC_020509|CRISPRCasFinder matches to NZ_CP018025 (Alteromonas mediterranea strain CP48 plasmid pAMCP48-600, complete sequence) position: , mismatch: 8, identity: 0.742

caactttagtagcgctcaatctgcttttgaa	CRISPR spacer
ctctctaagtagcgctgactctgcttttgat	Protospacer
*  ..* ********* * ***********

122. spacer 2.3|935792|34|NC_020509|CRISPRCasFinder matches to NZ_CP046399 (Bacillus sp. A260 plasmid unnamed11, complete sequence) position: , mismatch: 11, identity: 0.676

tagctttactgacaatacaggtttaaactttgat	CRISPR spacer
tgaagatactgacaaaacagatttaaacttattc	Protospacer
*..   ********* ****.*********   .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1407193 : 1418097

Bacillus_phage(28.57%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_015429480.1\|1407193_1409869_-	DNA polymerase I	A0A142F1Q9	Bacillus_phage	3.1e-46	28.6
WP_041199948.1\|1409934_1410549_-	restriction endonuclease subunit S	A0A2H4J2Z3	uncultured_Caudovirales_phage	9.9e-25	50.4
WP_015429482.1\|1410520_1411144_-	restriction endonuclease subunit S	A0A1W6JNN3	Staphylococcus_phage	2.3e-05	29.1
WP_015429483.1\|1411140_1413180_-	N-6 DNA methylase	A0A2H4JBT5	uncultured_Caudovirales_phage	1.9e-213	58.4
WP_015429484.1\|1413212_1413788_-	ComF family protein	NA	NA	NA	NA
WP_015429485.1\|1413775_1414351_-	dTMP kinase	Q2XUX0	environmental_halophage	6.4e-10	29.6
WP_015429486.1\|1414352_1414826_-	pantetheine-phosphate adenylyltransferase	A0A1B1IVQ3	uncultured_Mediterranean_phage	3.7e-27	44.2
WP_015429487.1\|1414825_1415389_-	UbiX family flavin prenyltransferase	NA	NA	NA	NA
WP_015429488.1\|1415398_1416055_-	flagellar basal body P-ring formation protein FlgA	NA	NA	NA	NA
WP_015429489.1\|1416051_1418097_-	DNA helicase UvrD	A7KV33	Bacillus_phage	2.2e-92	34.9

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NC_020509

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection