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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NC_020834 Mannheimia haemolytica USDA-ARS-USMARC-185, complete sequence 3 crisprs RT,DEDDh,cas3,c2c9_V-U4,cas5,cas8c,cas7,cas4,cas1,cas2,DinG,WYL,PD-DExK 0 40 179 0

Results visualization

1. NC_020834
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_020834_1 1020065-1022288 TypeI NA
33 spacers
cas2,cas1,cas4,cas7,cas8c,cas5,c2c9_V-U4

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_020834_2 1415574-1415648 TypeIV-A,TypeV-U4? NA
1 spacers
DinG

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_020834_3 1653068-1653142 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NC_020834_1 1.5|1020363|36|NC_020834|CRISPRCasFinder 1020363-1020398 36 NC_008201 Mannheimia phage phiMHaA1, complete genome 18740-18775 0 1.0
NC_020834_1 1.5|1020363|36|NC_020834|CRISPRCasFinder 1020363-1020398 36 DQ426905 Bacteriophage phi-MhaA1-BAA410, complete genome 18815-18850 0 1.0
NC_020834_1 1.5|1020363|36|NC_020834|CRISPRCasFinder 1020363-1020398 36 KP137432 Mannheimia phage vB_MhM_535AP1, complete genome 18780-18815 0 1.0
NC_020834_1 1.5|1020363|36|NC_020834|CRISPRCasFinder 1020363-1020398 36 JN255163 Mannheimia phage vB_MhM_1152AP, complete genome 18976-19011 0 1.0
NC_020834_1 1.5|1020363|36|NC_020834|CRISPRCasFinder 1020363-1020398 36 KP137438 Mannheimia phage vB_MhM_2256AP1, complete genome 19141-19176 0 1.0
NC_020834_1 1.5|1020363|36|NC_020834|CRISPRCasFinder 1020363-1020398 36 DQ426904 Bacteriophage phi-MhaA1-PHL101, complete genome 18740-18775 0 1.0
NC_020834_1 1.6|1020431|35|NC_020834|CRISPRCasFinder 1020431-1020465 35 NC_008201 Mannheimia phage phiMHaA1, complete genome 18136-18170 0 1.0
NC_020834_1 1.6|1020431|35|NC_020834|CRISPRCasFinder 1020431-1020465 35 DQ426905 Bacteriophage phi-MhaA1-BAA410, complete genome 18136-18170 0 1.0
NC_020834_1 1.6|1020431|35|NC_020834|CRISPRCasFinder 1020431-1020465 35 KP137432 Mannheimia phage vB_MhM_535AP1, complete genome 18136-18170 0 1.0
NC_020834_1 1.6|1020431|35|NC_020834|CRISPRCasFinder 1020431-1020465 35 JN255163 Mannheimia phage vB_MhM_1152AP, complete genome 18336-18370 0 1.0
NC_020834_1 1.6|1020431|35|NC_020834|CRISPRCasFinder 1020431-1020465 35 KP137438 Mannheimia phage vB_MhM_2256AP1, complete genome 18565-18599 0 1.0
NC_020834_1 1.6|1020431|35|NC_020834|CRISPRCasFinder 1020431-1020465 35 DQ426904 Bacteriophage phi-MhaA1-PHL101, complete genome 18136-18170 0 1.0
NC_020834_1 1.7|1020498|34|NC_020834|CRISPRCasFinder 1020498-1020531 34 NC_008201 Mannheimia phage phiMHaA1, complete genome 18391-18424 0 1.0
NC_020834_1 1.7|1020498|34|NC_020834|CRISPRCasFinder 1020498-1020531 34 DQ426905 Bacteriophage phi-MhaA1-BAA410, complete genome 18466-18499 0 1.0
NC_020834_1 1.7|1020498|34|NC_020834|CRISPRCasFinder 1020498-1020531 34 KP137432 Mannheimia phage vB_MhM_535AP1, complete genome 18431-18464 0 1.0
NC_020834_1 1.7|1020498|34|NC_020834|CRISPRCasFinder 1020498-1020531 34 JN255163 Mannheimia phage vB_MhM_1152AP, complete genome 18627-18660 0 1.0
NC_020834_1 1.7|1020498|34|NC_020834|CRISPRCasFinder 1020498-1020531 34 KP137438 Mannheimia phage vB_MhM_2256AP1, complete genome 18792-18825 0 1.0
NC_020834_1 1.7|1020498|34|NC_020834|CRISPRCasFinder 1020498-1020531 34 DQ426904 Bacteriophage phi-MhaA1-PHL101, complete genome 18391-18424 0 1.0
NC_020834_1 1.9|1020632|35|NC_020834|CRISPRCasFinder 1020632-1020666 35 NC_028853 Mannheimia phage vB_MhS_535AP2, complete genome 16097-16131 0 1.0
NC_020834_1 1.9|1020632|35|NC_020834|CRISPRCasFinder 1020632-1020666 35 KP137439 Mannheimia phage vB_MhS_3927AP1, complete genome 16097-16131 0 1.0
NC_020834_1 1.9|1020632|35|NC_020834|CRISPRCasFinder 1020632-1020666 35 NC_028956 Mannheimia phage vB_MhS_1152AP2, complete genome 16259-16293 0 1.0
NC_020834_1 1.9|1020632|35|NC_020834|CRISPRCasFinder 1020632-1020666 35 NC_028743 Mannheimia phage vB_MhS_587AP2, complete genome 16084-16118 0 1.0
NC_020834_1 1.15|1021028|34|NC_020834|CRISPRCasFinder 1021028-1021061 34 NC_008201 Mannheimia phage phiMHaA1, complete genome 21801-21834 0 1.0
NC_020834_1 1.15|1021028|34|NC_020834|CRISPRCasFinder 1021028-1021061 34 DQ426905 Bacteriophage phi-MhaA1-BAA410, complete genome 21876-21909 0 1.0
NC_020834_1 1.15|1021028|34|NC_020834|CRISPRCasFinder 1021028-1021061 34 KP137432 Mannheimia phage vB_MhM_535AP1, complete genome 21841-21874 0 1.0
NC_020834_1 1.15|1021028|34|NC_020834|CRISPRCasFinder 1021028-1021061 34 JN255163 Mannheimia phage vB_MhM_1152AP, complete genome 22037-22070 0 1.0
NC_020834_1 1.15|1021028|34|NC_020834|CRISPRCasFinder 1021028-1021061 34 KP137438 Mannheimia phage vB_MhM_2256AP1, complete genome 22202-22235 0 1.0
NC_020834_1 1.15|1021028|34|NC_020834|CRISPRCasFinder 1021028-1021061 34 NC_047750 Mannheimia phage vB_MhM_1127AP1, complete genome 22825-22858 0 1.0
NC_020834_1 1.15|1021028|34|NC_020834|CRISPRCasFinder 1021028-1021061 34 NC_028898 Mannheimia phage vB_MhM_587AP1, complete genome 22833-22866 0 1.0
NC_020834_1 1.15|1021028|34|NC_020834|CRISPRCasFinder 1021028-1021061 34 DQ426904 Bacteriophage phi-MhaA1-PHL101, complete genome 21801-21834 0 1.0
NC_020834_1 1.18|1021225|32|NC_020834|CRISPRCasFinder 1021225-1021256 32 NC_028853 Mannheimia phage vB_MhS_535AP2, complete genome 18562-18593 0 1.0
NC_020834_1 1.18|1021225|32|NC_020834|CRISPRCasFinder 1021225-1021256 32 KP137439 Mannheimia phage vB_MhS_3927AP1, complete genome 18562-18593 0 1.0
NC_020834_1 1.18|1021225|32|NC_020834|CRISPRCasFinder 1021225-1021256 32 NC_028956 Mannheimia phage vB_MhS_1152AP2, complete genome 18669-18700 0 1.0
NC_020834_1 1.20|1021355|32|NC_020834|CRISPRCasFinder 1021355-1021386 32 NC_028853 Mannheimia phage vB_MhS_535AP2, complete genome 18562-18593 0 1.0
NC_020834_1 1.20|1021355|32|NC_020834|CRISPRCasFinder 1021355-1021386 32 KP137439 Mannheimia phage vB_MhS_3927AP1, complete genome 18562-18593 0 1.0
NC_020834_1 1.20|1021355|32|NC_020834|CRISPRCasFinder 1021355-1021386 32 NC_028956 Mannheimia phage vB_MhS_1152AP2, complete genome 18669-18700 0 1.0
NC_020834_1 1.21|1021419|34|NC_020834|CRISPRCasFinder 1021419-1021452 34 NC_028766 Mannheimia phage vB_MhM_3927AP2, complete genome 11792-11825 0 1.0
NC_020834_1 1.22|1021485|34|NC_020834|CRISPRCasFinder 1021485-1021518 34 NC_028956 Mannheimia phage vB_MhS_1152AP2, complete genome 7850-7883 0 1.0
NC_020834_1 1.23|1021551|35|NC_020834|CRISPRCasFinder 1021551-1021585 35 NC_028956 Mannheimia phage vB_MhS_1152AP2, complete genome 2680-2714 0 1.0
NC_020834_1 1.25|1021686|36|NC_020834|CRISPRCasFinder 1021686-1021721 36 KP137439 Mannheimia phage vB_MhS_3927AP1, complete genome 23116-23151 0 1.0
NC_020834_1 1.25|1021686|36|NC_020834|CRISPRCasFinder 1021686-1021721 36 NC_028956 Mannheimia phage vB_MhS_1152AP2, complete genome 23223-23258 0 1.0
NC_020834_1 1.27|1021821|34|NC_020834|CRISPRCasFinder 1021821-1021854 34 NC_028956 Mannheimia phage vB_MhS_1152AP2, complete genome 19193-19226 0 1.0
NC_020834_1 1.27|1021821|34|NC_020834|CRISPRCasFinder 1021821-1021854 34 NC_028743 Mannheimia phage vB_MhS_587AP2, complete genome 19018-19051 0 1.0
NC_020834_1 1.30|1022021|37|NC_020834|CRISPRCasFinder 1022021-1022057 37 KP137439 Mannheimia phage vB_MhS_3927AP1, complete genome 27263-27299 0 1.0
NC_020834_1 1.30|1022021|37|NC_020834|CRISPRCasFinder 1022021-1022057 37 NC_028956 Mannheimia phage vB_MhS_1152AP2, complete genome 27371-27407 0 1.0
NC_020834_1 1.37|1020363|37|NC_020834|PILER-CR,CRT 1020363-1020399 37 NC_008201 Mannheimia phage phiMHaA1, complete genome 18740-18776 0 1.0
NC_020834_1 1.37|1020363|37|NC_020834|PILER-CR,CRT 1020363-1020399 37 DQ426905 Bacteriophage phi-MhaA1-BAA410, complete genome 18815-18851 0 1.0
NC_020834_1 1.37|1020363|37|NC_020834|PILER-CR,CRT 1020363-1020399 37 KP137432 Mannheimia phage vB_MhM_535AP1, complete genome 18780-18816 0 1.0
NC_020834_1 1.37|1020363|37|NC_020834|PILER-CR,CRT 1020363-1020399 37 JN255163 Mannheimia phage vB_MhM_1152AP, complete genome 18976-19012 0 1.0
NC_020834_1 1.37|1020363|37|NC_020834|PILER-CR,CRT 1020363-1020399 37 KP137438 Mannheimia phage vB_MhM_2256AP1, complete genome 19141-19177 0 1.0
NC_020834_1 1.37|1020363|37|NC_020834|PILER-CR,CRT 1020363-1020399 37 DQ426904 Bacteriophage phi-MhaA1-PHL101, complete genome 18740-18776 0 1.0
NC_020834_1 1.41|1020632|36|NC_020834|PILER-CR,CRT 1020632-1020667 36 NC_028853 Mannheimia phage vB_MhS_535AP2, complete genome 16097-16132 0 1.0
NC_020834_1 1.41|1020632|36|NC_020834|PILER-CR,CRT 1020632-1020667 36 KP137439 Mannheimia phage vB_MhS_3927AP1, complete genome 16097-16132 0 1.0
NC_020834_1 1.41|1020632|36|NC_020834|PILER-CR,CRT 1020632-1020667 36 NC_028956 Mannheimia phage vB_MhS_1152AP2, complete genome 16259-16294 0 1.0
NC_020834_1 1.41|1020632|36|NC_020834|PILER-CR,CRT 1020632-1020667 36 NC_028743 Mannheimia phage vB_MhS_587AP2, complete genome 16084-16119 0 1.0
NC_020834_1 1.47|1021028|35|NC_020834|PILER-CR,CRT 1021028-1021062 35 NC_008201 Mannheimia phage phiMHaA1, complete genome 21801-21835 0 1.0
NC_020834_1 1.47|1021028|35|NC_020834|PILER-CR,CRT 1021028-1021062 35 DQ426905 Bacteriophage phi-MhaA1-BAA410, complete genome 21876-21910 0 1.0
NC_020834_1 1.47|1021028|35|NC_020834|PILER-CR,CRT 1021028-1021062 35 KP137432 Mannheimia phage vB_MhM_535AP1, complete genome 21841-21875 0 1.0
NC_020834_1 1.47|1021028|35|NC_020834|PILER-CR,CRT 1021028-1021062 35 JN255163 Mannheimia phage vB_MhM_1152AP, complete genome 22037-22071 0 1.0
NC_020834_1 1.47|1021028|35|NC_020834|PILER-CR,CRT 1021028-1021062 35 KP137438 Mannheimia phage vB_MhM_2256AP1, complete genome 22202-22236 0 1.0
NC_020834_1 1.47|1021028|35|NC_020834|PILER-CR,CRT 1021028-1021062 35 NC_047750 Mannheimia phage vB_MhM_1127AP1, complete genome 22825-22859 0 1.0
NC_020834_1 1.47|1021028|35|NC_020834|PILER-CR,CRT 1021028-1021062 35 NC_028898 Mannheimia phage vB_MhM_587AP1, complete genome 22833-22867 0 1.0
NC_020834_1 1.47|1021028|35|NC_020834|PILER-CR,CRT 1021028-1021062 35 DQ426904 Bacteriophage phi-MhaA1-PHL101, complete genome 21801-21835 0 1.0
NC_020834_1 1.50|1021225|33|NC_020834|PILER-CR,CRT 1021225-1021257 33 NC_028853 Mannheimia phage vB_MhS_535AP2, complete genome 18562-18594 0 1.0
NC_020834_1 1.50|1021225|33|NC_020834|PILER-CR,CRT 1021225-1021257 33 KP137439 Mannheimia phage vB_MhS_3927AP1, complete genome 18562-18594 0 1.0
NC_020834_1 1.50|1021225|33|NC_020834|PILER-CR,CRT 1021225-1021257 33 NC_028956 Mannheimia phage vB_MhS_1152AP2, complete genome 18669-18701 0 1.0
NC_020834_1 1.52|1021355|33|NC_020834|PILER-CR,CRT 1021355-1021387 33 NC_028853 Mannheimia phage vB_MhS_535AP2, complete genome 18562-18594 0 1.0
NC_020834_1 1.52|1021355|33|NC_020834|PILER-CR,CRT 1021355-1021387 33 KP137439 Mannheimia phage vB_MhS_3927AP1, complete genome 18562-18594 0 1.0
NC_020834_1 1.52|1021355|33|NC_020834|PILER-CR,CRT 1021355-1021387 33 NC_028956 Mannheimia phage vB_MhS_1152AP2, complete genome 18669-18701 0 1.0
NC_020834_1 1.53|1021419|35|NC_020834|PILER-CR,CRT 1021419-1021453 35 NC_028766 Mannheimia phage vB_MhM_3927AP2, complete genome 11792-11826 0 1.0
NC_020834_1 1.1|1020097|34|NC_020834|CRISPRCasFinder 1020097-1020130 34 NC_008201 Mannheimia phage phiMHaA1, complete genome 20158-20191 1 0.971
NC_020834_1 1.1|1020097|34|NC_020834|CRISPRCasFinder 1020097-1020130 34 DQ426905 Bacteriophage phi-MhaA1-BAA410, complete genome 20233-20266 1 0.971
NC_020834_1 1.1|1020097|34|NC_020834|CRISPRCasFinder 1020097-1020130 34 KP137432 Mannheimia phage vB_MhM_535AP1, complete genome 20198-20231 1 0.971
NC_020834_1 1.1|1020097|34|NC_020834|CRISPRCasFinder 1020097-1020130 34 JN255163 Mannheimia phage vB_MhM_1152AP, complete genome 20394-20427 1 0.971
NC_020834_1 1.1|1020097|34|NC_020834|CRISPRCasFinder 1020097-1020130 34 KP137438 Mannheimia phage vB_MhM_2256AP1, complete genome 20559-20592 1 0.971
NC_020834_1 1.1|1020097|34|NC_020834|CRISPRCasFinder 1020097-1020130 34 NC_047750 Mannheimia phage vB_MhM_1127AP1, complete genome 21145-21178 1 0.971
NC_020834_1 1.1|1020097|34|NC_020834|CRISPRCasFinder 1020097-1020130 34 NC_028898 Mannheimia phage vB_MhM_587AP1, complete genome 21154-21187 1 0.971
NC_020834_1 1.1|1020097|34|NC_020834|CRISPRCasFinder 1020097-1020130 34 DQ426904 Bacteriophage phi-MhaA1-PHL101, complete genome 20158-20191 1 0.971
NC_020834_1 1.11|1020766|34|NC_020834|CRISPRCasFinder 1020766-1020799 34 NC_047750 Mannheimia phage vB_MhM_1127AP1, complete genome 20505-20538 1 0.971
NC_020834_1 1.11|1020766|34|NC_020834|CRISPRCasFinder 1020766-1020799 34 NC_028898 Mannheimia phage vB_MhM_587AP1, complete genome 20514-20547 1 0.971
NC_020834_1 1.14|1020962|34|NC_020834|CRISPRCasFinder 1020962-1020995 34 NC_047750 Mannheimia phage vB_MhM_1127AP1, complete genome 20505-20538 1 0.971
NC_020834_1 1.14|1020962|34|NC_020834|CRISPRCasFinder 1020962-1020995 34 NC_028898 Mannheimia phage vB_MhM_587AP1, complete genome 20514-20547 1 0.971
NC_020834_1 1.38|1020431|36|NC_020834|PILER-CR,CRT 1020431-1020466 36 NC_008201 Mannheimia phage phiMHaA1, complete genome 18136-18171 1 0.972
NC_020834_1 1.38|1020431|36|NC_020834|PILER-CR,CRT 1020431-1020466 36 DQ426905 Bacteriophage phi-MhaA1-BAA410, complete genome 18136-18171 1 0.972
NC_020834_1 1.38|1020431|36|NC_020834|PILER-CR,CRT 1020431-1020466 36 KP137432 Mannheimia phage vB_MhM_535AP1, complete genome 18136-18171 1 0.972
NC_020834_1 1.38|1020431|36|NC_020834|PILER-CR,CRT 1020431-1020466 36 JN255163 Mannheimia phage vB_MhM_1152AP, complete genome 18336-18371 1 0.972
NC_020834_1 1.38|1020431|36|NC_020834|PILER-CR,CRT 1020431-1020466 36 KP137438 Mannheimia phage vB_MhM_2256AP1, complete genome 18565-18600 1 0.972
NC_020834_1 1.38|1020431|36|NC_020834|PILER-CR,CRT 1020431-1020466 36 DQ426904 Bacteriophage phi-MhaA1-PHL101, complete genome 18136-18171 1 0.972
NC_020834_1 1.39|1020498|35|NC_020834|PILER-CR,CRT 1020498-1020532 35 NC_008201 Mannheimia phage phiMHaA1, complete genome 18391-18425 1 0.971
NC_020834_1 1.39|1020498|35|NC_020834|PILER-CR,CRT 1020498-1020532 35 DQ426905 Bacteriophage phi-MhaA1-BAA410, complete genome 18466-18500 1 0.971
NC_020834_1 1.39|1020498|35|NC_020834|PILER-CR,CRT 1020498-1020532 35 KP137432 Mannheimia phage vB_MhM_535AP1, complete genome 18431-18465 1 0.971
NC_020834_1 1.39|1020498|35|NC_020834|PILER-CR,CRT 1020498-1020532 35 JN255163 Mannheimia phage vB_MhM_1152AP, complete genome 18627-18661 1 0.971
NC_020834_1 1.39|1020498|35|NC_020834|PILER-CR,CRT 1020498-1020532 35 KP137438 Mannheimia phage vB_MhM_2256AP1, complete genome 18792-18826 1 0.971
NC_020834_1 1.39|1020498|35|NC_020834|PILER-CR,CRT 1020498-1020532 35 DQ426904 Bacteriophage phi-MhaA1-PHL101, complete genome 18391-18425 1 0.971
NC_020834_1 1.43|1020766|35|NC_020834|PILER-CR,CRT 1020766-1020800 35 NC_047750 Mannheimia phage vB_MhM_1127AP1, complete genome 20505-20539 1 0.971
NC_020834_1 1.43|1020766|35|NC_020834|PILER-CR,CRT 1020766-1020800 35 NC_028898 Mannheimia phage vB_MhM_587AP1, complete genome 20514-20548 1 0.971
NC_020834_1 1.46|1020962|35|NC_020834|PILER-CR,CRT 1020962-1020996 35 NC_047750 Mannheimia phage vB_MhM_1127AP1, complete genome 20505-20539 1 0.971
NC_020834_1 1.46|1020962|35|NC_020834|PILER-CR,CRT 1020962-1020996 35 NC_028898 Mannheimia phage vB_MhM_587AP1, complete genome 20514-20548 1 0.971
NC_020834_1 1.54|1021485|35|NC_020834|PILER-CR,CRT 1021485-1021519 35 NC_028956 Mannheimia phage vB_MhS_1152AP2, complete genome 7850-7884 1 0.971
NC_020834_1 1.55|1021551|36|NC_020834|PILER-CR,CRT 1021551-1021586 36 NC_028956 Mannheimia phage vB_MhS_1152AP2, complete genome 2680-2715 1 0.972
NC_020834_1 1.57|1021686|37|NC_020834|PILER-CR,CRT 1021686-1021722 37 KP137439 Mannheimia phage vB_MhS_3927AP1, complete genome 23115-23151 1 0.973
NC_020834_1 1.57|1021686|37|NC_020834|PILER-CR,CRT 1021686-1021722 37 NC_028956 Mannheimia phage vB_MhS_1152AP2, complete genome 23222-23258 1 0.973
NC_020834_1 1.59|1021821|35|NC_020834|PILER-CR,CRT 1021821-1021855 35 NC_028956 Mannheimia phage vB_MhS_1152AP2, complete genome 19192-19226 1 0.971
NC_020834_1 1.59|1021821|35|NC_020834|PILER-CR,CRT 1021821-1021855 35 NC_028743 Mannheimia phage vB_MhS_587AP2, complete genome 19017-19051 1 0.971
NC_020834_1 1.62|1022021|38|NC_020834|PILER-CR,CRT 1022021-1022058 38 KP137439 Mannheimia phage vB_MhS_3927AP1, complete genome 27262-27299 1 0.974
NC_020834_1 1.62|1022021|38|NC_020834|PILER-CR,CRT 1022021-1022058 38 NC_028956 Mannheimia phage vB_MhS_1152AP2, complete genome 27370-27407 1 0.974
NC_020834_1 1.18|1021225|32|NC_020834|CRISPRCasFinder 1021225-1021256 32 NC_028743 Mannheimia phage vB_MhS_587AP2, complete genome 18494-18525 2 0.938
NC_020834_1 1.20|1021355|32|NC_020834|CRISPRCasFinder 1021355-1021386 32 NC_028743 Mannheimia phage vB_MhS_587AP2, complete genome 18494-18525 2 0.938
NC_020834_1 1.33|1020097|35|NC_020834|PILER-CR,CRT 1020097-1020131 35 NC_008201 Mannheimia phage phiMHaA1, complete genome 20157-20191 2 0.943
NC_020834_1 1.33|1020097|35|NC_020834|PILER-CR,CRT 1020097-1020131 35 DQ426905 Bacteriophage phi-MhaA1-BAA410, complete genome 20232-20266 2 0.943
NC_020834_1 1.33|1020097|35|NC_020834|PILER-CR,CRT 1020097-1020131 35 KP137432 Mannheimia phage vB_MhM_535AP1, complete genome 20197-20231 2 0.943
NC_020834_1 1.33|1020097|35|NC_020834|PILER-CR,CRT 1020097-1020131 35 JN255163 Mannheimia phage vB_MhM_1152AP, complete genome 20393-20427 2 0.943
NC_020834_1 1.33|1020097|35|NC_020834|PILER-CR,CRT 1020097-1020131 35 KP137438 Mannheimia phage vB_MhM_2256AP1, complete genome 20558-20592 2 0.943
NC_020834_1 1.33|1020097|35|NC_020834|PILER-CR,CRT 1020097-1020131 35 NC_047750 Mannheimia phage vB_MhM_1127AP1, complete genome 21144-21178 2 0.943
NC_020834_1 1.33|1020097|35|NC_020834|PILER-CR,CRT 1020097-1020131 35 NC_028898 Mannheimia phage vB_MhM_587AP1, complete genome 21153-21187 2 0.943
NC_020834_1 1.33|1020097|35|NC_020834|PILER-CR,CRT 1020097-1020131 35 DQ426904 Bacteriophage phi-MhaA1-PHL101, complete genome 20157-20191 2 0.943
NC_020834_1 1.4|1020295|36|NC_020834|CRISPRCasFinder 1020295-1020330 36 NC_028743 Mannheimia phage vB_MhS_587AP2, complete genome 15167-15202 3 0.917
NC_020834_1 1.50|1021225|33|NC_020834|PILER-CR,CRT 1021225-1021257 33 NC_028743 Mannheimia phage vB_MhS_587AP2, complete genome 18494-18526 3 0.909
NC_020834_1 1.52|1021355|33|NC_020834|PILER-CR,CRT 1021355-1021387 33 NC_028743 Mannheimia phage vB_MhS_587AP2, complete genome 18494-18526 3 0.909
NC_020834_1 1.36|1020295|37|NC_020834|PILER-CR,CRT 1020295-1020331 37 NC_028743 Mannheimia phage vB_MhS_587AP2, complete genome 15166-15202 4 0.892
NC_020834_2 2.1|1415597|29|NC_020834|CRISPRCasFinder 1415597-1415625 29 MH791397 UNVERIFIED: Enterococcus phage EfsSzw-1, complete genome 22354-22382 5 0.828
NC_020834_3 3.1|1653091|29|NC_020834|CRISPRCasFinder 1653091-1653119 29 MH791397 UNVERIFIED: Enterococcus phage EfsSzw-1, complete genome 22354-22382 5 0.828
NC_020834_1 1.7|1020498|34|NC_020834|CRISPRCasFinder 1020498-1020531 34 NC_047750 Mannheimia phage vB_MhM_1127AP1, complete genome 19383-19416 6 0.824
NC_020834_1 1.7|1020498|34|NC_020834|CRISPRCasFinder 1020498-1020531 34 NC_028898 Mannheimia phage vB_MhM_587AP1, complete genome 19392-19425 6 0.824
NC_020834_1 1.12|1020832|33|NC_020834|CRISPRCasFinder 1020832-1020864 33 EF694690 Campylobacter phage CGC-2007 isolate Cj00-6470 cje0216, cje0217, cje0218, cje0219, cje0220, cje0221, cje0222, cje0223, cje0224, cje0225, cje0226, cje0227, and cje0228 genes, complete cds; cje0229 gene, partial cds; cje0230 and cje0231 genes, complete cds; and cje0232 gene, partial cds 7689-7721 6 0.818
NC_020834_1 1.12|1020832|33|NC_020834|CRISPRCasFinder 1020832-1020864 33 EF694690 Campylobacter phage CGC-2007 isolate Cj00-6470 cje0216, cje0217, cje0218, cje0219, cje0220, cje0221, cje0222, cje0223, cje0224, cje0225, cje0226, cje0227, and cje0228 genes, complete cds; cje0229 gene, partial cds; cje0230 and cje0231 genes, complete cds; and cje0232 gene, partial cds 7698-7730 6 0.818
NC_020834_1 1.12|1020832|33|NC_020834|CRISPRCasFinder 1020832-1020864 33 NZ_CP021063 Bacillus thuringiensis strain ATCC 10792 plasmid poh2, complete sequence 8477-8509 7 0.788
NC_020834_1 1.12|1020832|33|NC_020834|CRISPRCasFinder 1020832-1020864 33 EF694690 Campylobacter phage CGC-2007 isolate Cj00-6470 cje0216, cje0217, cje0218, cje0219, cje0220, cje0221, cje0222, cje0223, cje0224, cje0225, cje0226, cje0227, and cje0228 genes, complete cds; cje0229 gene, partial cds; cje0230 and cje0231 genes, complete cds; and cje0232 gene, partial cds 7707-7739 7 0.788
NC_020834_1 1.12|1020832|33|NC_020834|CRISPRCasFinder 1020832-1020864 33 EF694690 Campylobacter phage CGC-2007 isolate Cj00-6470 cje0216, cje0217, cje0218, cje0219, cje0220, cje0221, cje0222, cje0223, cje0224, cje0225, cje0226, cje0227, and cje0228 genes, complete cds; cje0229 gene, partial cds; cje0230 and cje0231 genes, complete cds; and cje0232 gene, partial cds 7680-7712 7 0.788
NC_020834_1 1.12|1020832|33|NC_020834|CRISPRCasFinder 1020832-1020864 33 CP020756 Bacillus thuringiensis strain ATCC 10792 plasmid pLDW-17, complete sequence 129717-129749 7 0.788
NC_020834_1 1.12|1020832|33|NC_020834|CRISPRCasFinder 1020832-1020864 33 NZ_CP013615 Clostridium perfringens strain JP838 plasmid pJFP838A, complete sequence 355920-355952 7 0.788
NC_020834_1 1.39|1020498|35|NC_020834|PILER-CR,CRT 1020498-1020532 35 NC_047750 Mannheimia phage vB_MhM_1127AP1, complete genome 19383-19417 7 0.8
NC_020834_1 1.39|1020498|35|NC_020834|PILER-CR,CRT 1020498-1020532 35 NC_028898 Mannheimia phage vB_MhM_587AP1, complete genome 19392-19426 7 0.8
NC_020834_1 1.44|1020832|34|NC_020834|PILER-CR,CRT 1020832-1020865 34 EF694690 Campylobacter phage CGC-2007 isolate Cj00-6470 cje0216, cje0217, cje0218, cje0219, cje0220, cje0221, cje0222, cje0223, cje0224, cje0225, cje0226, cje0227, and cje0228 genes, complete cds; cje0229 gene, partial cds; cje0230 and cje0231 genes, complete cds; and cje0232 gene, partial cds 7689-7722 7 0.794
NC_020834_1 1.44|1020832|34|NC_020834|PILER-CR,CRT 1020832-1020865 34 EF694690 Campylobacter phage CGC-2007 isolate Cj00-6470 cje0216, cje0217, cje0218, cje0219, cje0220, cje0221, cje0222, cje0223, cje0224, cje0225, cje0226, cje0227, and cje0228 genes, complete cds; cje0229 gene, partial cds; cje0230 and cje0231 genes, complete cds; and cje0232 gene, partial cds 7698-7731 7 0.794
NC_020834_1 1.12|1020832|33|NC_020834|CRISPRCasFinder 1020832-1020864 33 NC_011412 Clostridium perfringens plasmid pCP8533etx, complete sequence 25483-25515 8 0.758
NC_020834_1 1.12|1020832|33|NC_020834|CRISPRCasFinder 1020832-1020864 33 MH616940 Microviridae sp. isolate ctdg534, complete genome 4646-4678 8 0.758
NC_020834_1 1.12|1020832|33|NC_020834|CRISPRCasFinder 1020832-1020864 33 NC_014533 Gloeothece verrucosa PCC 7822 plasmid Cy782201, complete sequence 639984-640016 8 0.758
NC_020834_1 1.12|1020832|33|NC_020834|CRISPRCasFinder 1020832-1020864 33 KX229736 Campylobacter phage PC5, complete genome 36684-36716 8 0.758
NC_020834_1 1.12|1020832|33|NC_020834|CRISPRCasFinder 1020832-1020864 33 MT773556 Myoviridae sp. isolate BML_4 genomic sequence 116193-116225 8 0.758
NC_020834_1 1.44|1020832|34|NC_020834|PILER-CR,CRT 1020832-1020865 34 NZ_CP021063 Bacillus thuringiensis strain ATCC 10792 plasmid poh2, complete sequence 8477-8510 8 0.765
NC_020834_1 1.44|1020832|34|NC_020834|PILER-CR,CRT 1020832-1020865 34 EF694690 Campylobacter phage CGC-2007 isolate Cj00-6470 cje0216, cje0217, cje0218, cje0219, cje0220, cje0221, cje0222, cje0223, cje0224, cje0225, cje0226, cje0227, and cje0228 genes, complete cds; cje0229 gene, partial cds; cje0230 and cje0231 genes, complete cds; and cje0232 gene, partial cds 7707-7740 8 0.765
NC_020834_1 1.44|1020832|34|NC_020834|PILER-CR,CRT 1020832-1020865 34 EF694690 Campylobacter phage CGC-2007 isolate Cj00-6470 cje0216, cje0217, cje0218, cje0219, cje0220, cje0221, cje0222, cje0223, cje0224, cje0225, cje0226, cje0227, and cje0228 genes, complete cds; cje0229 gene, partial cds; cje0230 and cje0231 genes, complete cds; and cje0232 gene, partial cds 7680-7713 8 0.765
NC_020834_1 1.44|1020832|34|NC_020834|PILER-CR,CRT 1020832-1020865 34 CP020756 Bacillus thuringiensis strain ATCC 10792 plasmid pLDW-17, complete sequence 129716-129749 8 0.765
NC_020834_1 1.44|1020832|34|NC_020834|PILER-CR,CRT 1020832-1020865 34 NZ_CP013615 Clostridium perfringens strain JP838 plasmid pJFP838A, complete sequence 355920-355953 8 0.765
NC_020834_1 1.44|1020832|34|NC_020834|PILER-CR,CRT 1020832-1020865 34 KX229736 Campylobacter phage PC5, complete genome 36684-36717 8 0.765
NC_020834_1 1.10|1020699|35|NC_020834|CRISPRCasFinder 1020699-1020733 35 NZ_LR214939 Mycoplasma salivarium strain NCTC10113 plasmid 2 140714-140748 9 0.743
NC_020834_1 1.12|1020832|33|NC_020834|CRISPRCasFinder 1020832-1020864 33 NZ_CP046304 Staphylococcus hominis strain FDAARGOS_746 plasmid unnamed1, complete sequence 4191-4223 9 0.727
NC_020834_1 1.12|1020832|33|NC_020834|CRISPRCasFinder 1020832-1020864 33 MH572392 Microviridae sp. isolate SD_SF_13, complete genome 2078-2110 9 0.727
NC_020834_1 1.12|1020832|33|NC_020834|CRISPRCasFinder 1020832-1020864 33 LC425521 Uncultured phage DNA, contig: NODE562 7572-7604 9 0.727
NC_020834_1 1.44|1020832|34|NC_020834|PILER-CR,CRT 1020832-1020865 34 NC_011412 Clostridium perfringens plasmid pCP8533etx, complete sequence 25483-25516 9 0.735
NC_020834_1 1.44|1020832|34|NC_020834|PILER-CR,CRT 1020832-1020865 34 MH616940 Microviridae sp. isolate ctdg534, complete genome 4645-4678 9 0.735
NC_020834_1 1.44|1020832|34|NC_020834|PILER-CR,CRT 1020832-1020865 34 MT773556 Myoviridae sp. isolate BML_4 genomic sequence 116192-116225 9 0.735
NC_020834_1 1.6|1020431|35|NC_020834|CRISPRCasFinder 1020431-1020465 35 HM144385 Brochothrix phage NF5, complete genome 32998-33032 10 0.714
NC_020834_1 1.12|1020832|33|NC_020834|CRISPRCasFinder 1020832-1020864 33 NZ_CP054001 Bacteroides fragilis strain FDAARGOS_763 plasmid unnamed1, complete sequence 10966-10998 10 0.697
NC_020834_1 1.12|1020832|33|NC_020834|CRISPRCasFinder 1020832-1020864 33 MH107028 Campylobacter phage CP39, partial genome 1066-1098 10 0.697
NC_020834_1 1.21|1021419|34|NC_020834|CRISPRCasFinder 1021419-1021452 34 NZ_CP035496 Xylanimonas allomyrinae strain 2JSPR-7 plasmid unnamed1, complete sequence 3376-3409 10 0.706
NC_020834_1 1.44|1020832|34|NC_020834|PILER-CR,CRT 1020832-1020865 34 NZ_CP046304 Staphylococcus hominis strain FDAARGOS_746 plasmid unnamed1, complete sequence 4190-4223 10 0.706
NC_020834_1 1.44|1020832|34|NC_020834|PILER-CR,CRT 1020832-1020865 34 MH572392 Microviridae sp. isolate SD_SF_13, complete genome 2077-2110 10 0.706
NC_020834_1 1.44|1020832|34|NC_020834|PILER-CR,CRT 1020832-1020865 34 LC425521 Uncultured phage DNA, contig: NODE562 7571-7604 10 0.706
NC_020834_1 1.44|1020832|34|NC_020834|PILER-CR,CRT 1020832-1020865 34 MH107028 Campylobacter phage CP39, partial genome 1065-1098 10 0.706
NC_020834_1 1.21|1021419|34|NC_020834|CRISPRCasFinder 1021419-1021452 34 NZ_CP017942 Phyllobacterium zundukense strain Tri-48 plasmid unnamed3, complete sequence 197834-197867 11 0.676
NC_020834_1 1.26|1021754|35|NC_020834|CRISPRCasFinder 1021754-1021788 35 NC_014534 Gloeothece verrucosa PCC 7822 plasmid Cy782202, complete sequence 368774-368808 11 0.686
NC_020834_1 1.44|1020832|34|NC_020834|PILER-CR,CRT 1020832-1020865 34 NZ_CP054001 Bacteroides fragilis strain FDAARGOS_763 plasmid unnamed1, complete sequence 10965-10998 11 0.676

1. spacer 1.5|1020363|36|NC_020834|CRISPRCasFinder matches to NC_008201 (Mannheimia phage phiMHaA1, complete genome) position: , mismatch: 0, identity: 1.0

caccgctgctacttcggttatcggagtagtttgcac	CRISPR spacer
caccgctgctacttcggttatcggagtagtttgcac	Protospacer
************************************

2. spacer 1.5|1020363|36|NC_020834|CRISPRCasFinder matches to DQ426905 (Bacteriophage phi-MhaA1-BAA410, complete genome) position: , mismatch: 0, identity: 1.0

caccgctgctacttcggttatcggagtagtttgcac	CRISPR spacer
caccgctgctacttcggttatcggagtagtttgcac	Protospacer
************************************

3. spacer 1.5|1020363|36|NC_020834|CRISPRCasFinder matches to KP137432 (Mannheimia phage vB_MhM_535AP1, complete genome) position: , mismatch: 0, identity: 1.0

caccgctgctacttcggttatcggagtagtttgcac	CRISPR spacer
caccgctgctacttcggttatcggagtagtttgcac	Protospacer
************************************

4. spacer 1.5|1020363|36|NC_020834|CRISPRCasFinder matches to JN255163 (Mannheimia phage vB_MhM_1152AP, complete genome) position: , mismatch: 0, identity: 1.0

caccgctgctacttcggttatcggagtagtttgcac	CRISPR spacer
caccgctgctacttcggttatcggagtagtttgcac	Protospacer
************************************

5. spacer 1.5|1020363|36|NC_020834|CRISPRCasFinder matches to KP137438 (Mannheimia phage vB_MhM_2256AP1, complete genome) position: , mismatch: 0, identity: 1.0

caccgctgctacttcggttatcggagtagtttgcac	CRISPR spacer
caccgctgctacttcggttatcggagtagtttgcac	Protospacer
************************************

6. spacer 1.5|1020363|36|NC_020834|CRISPRCasFinder matches to DQ426904 (Bacteriophage phi-MhaA1-PHL101, complete genome) position: , mismatch: 0, identity: 1.0

caccgctgctacttcggttatcggagtagtttgcac	CRISPR spacer
caccgctgctacttcggttatcggagtagtttgcac	Protospacer
************************************

7. spacer 1.6|1020431|35|NC_020834|CRISPRCasFinder matches to NC_008201 (Mannheimia phage phiMHaA1, complete genome) position: , mismatch: 0, identity: 1.0

gtggcacagtaacacgagcagatgctgataaacgc	CRISPR spacer
gtggcacagtaacacgagcagatgctgataaacgc	Protospacer
***********************************

8. spacer 1.6|1020431|35|NC_020834|CRISPRCasFinder matches to DQ426905 (Bacteriophage phi-MhaA1-BAA410, complete genome) position: , mismatch: 0, identity: 1.0

gtggcacagtaacacgagcagatgctgataaacgc	CRISPR spacer
gtggcacagtaacacgagcagatgctgataaacgc	Protospacer
***********************************

9. spacer 1.6|1020431|35|NC_020834|CRISPRCasFinder matches to KP137432 (Mannheimia phage vB_MhM_535AP1, complete genome) position: , mismatch: 0, identity: 1.0

gtggcacagtaacacgagcagatgctgataaacgc	CRISPR spacer
gtggcacagtaacacgagcagatgctgataaacgc	Protospacer
***********************************

10. spacer 1.6|1020431|35|NC_020834|CRISPRCasFinder matches to JN255163 (Mannheimia phage vB_MhM_1152AP, complete genome) position: , mismatch: 0, identity: 1.0

gtggcacagtaacacgagcagatgctgataaacgc	CRISPR spacer
gtggcacagtaacacgagcagatgctgataaacgc	Protospacer
***********************************

11. spacer 1.6|1020431|35|NC_020834|CRISPRCasFinder matches to KP137438 (Mannheimia phage vB_MhM_2256AP1, complete genome) position: , mismatch: 0, identity: 1.0

gtggcacagtaacacgagcagatgctgataaacgc	CRISPR spacer
gtggcacagtaacacgagcagatgctgataaacgc	Protospacer
***********************************

12. spacer 1.6|1020431|35|NC_020834|CRISPRCasFinder matches to DQ426904 (Bacteriophage phi-MhaA1-PHL101, complete genome) position: , mismatch: 0, identity: 1.0

gtggcacagtaacacgagcagatgctgataaacgc	CRISPR spacer
gtggcacagtaacacgagcagatgctgataaacgc	Protospacer
***********************************

13. spacer 1.7|1020498|34|NC_020834|CRISPRCasFinder matches to NC_008201 (Mannheimia phage phiMHaA1, complete genome) position: , mismatch: 0, identity: 1.0

cagcagccgttgttaccgtggtgcaatgcttgcg	CRISPR spacer
cagcagccgttgttaccgtggtgcaatgcttgcg	Protospacer
**********************************

14. spacer 1.7|1020498|34|NC_020834|CRISPRCasFinder matches to DQ426905 (Bacteriophage phi-MhaA1-BAA410, complete genome) position: , mismatch: 0, identity: 1.0

cagcagccgttgttaccgtggtgcaatgcttgcg	CRISPR spacer
cagcagccgttgttaccgtggtgcaatgcttgcg	Protospacer
**********************************

15. spacer 1.7|1020498|34|NC_020834|CRISPRCasFinder matches to KP137432 (Mannheimia phage vB_MhM_535AP1, complete genome) position: , mismatch: 0, identity: 1.0

cagcagccgttgttaccgtggtgcaatgcttgcg	CRISPR spacer
cagcagccgttgttaccgtggtgcaatgcttgcg	Protospacer
**********************************

16. spacer 1.7|1020498|34|NC_020834|CRISPRCasFinder matches to JN255163 (Mannheimia phage vB_MhM_1152AP, complete genome) position: , mismatch: 0, identity: 1.0

cagcagccgttgttaccgtggtgcaatgcttgcg	CRISPR spacer
cagcagccgttgttaccgtggtgcaatgcttgcg	Protospacer
**********************************

17. spacer 1.7|1020498|34|NC_020834|CRISPRCasFinder matches to KP137438 (Mannheimia phage vB_MhM_2256AP1, complete genome) position: , mismatch: 0, identity: 1.0

cagcagccgttgttaccgtggtgcaatgcttgcg	CRISPR spacer
cagcagccgttgttaccgtggtgcaatgcttgcg	Protospacer
**********************************

18. spacer 1.7|1020498|34|NC_020834|CRISPRCasFinder matches to DQ426904 (Bacteriophage phi-MhaA1-PHL101, complete genome) position: , mismatch: 0, identity: 1.0

cagcagccgttgttaccgtggtgcaatgcttgcg	CRISPR spacer
cagcagccgttgttaccgtggtgcaatgcttgcg	Protospacer
**********************************

19. spacer 1.9|1020632|35|NC_020834|CRISPRCasFinder matches to NC_028853 (Mannheimia phage vB_MhS_535AP2, complete genome) position: , mismatch: 0, identity: 1.0

acatcccgagccaaacggcaagcctatattatctg	CRISPR spacer
acatcccgagccaaacggcaagcctatattatctg	Protospacer
***********************************

20. spacer 1.9|1020632|35|NC_020834|CRISPRCasFinder matches to KP137439 (Mannheimia phage vB_MhS_3927AP1, complete genome) position: , mismatch: 0, identity: 1.0

acatcccgagccaaacggcaagcctatattatctg	CRISPR spacer
acatcccgagccaaacggcaagcctatattatctg	Protospacer
***********************************

21. spacer 1.9|1020632|35|NC_020834|CRISPRCasFinder matches to NC_028956 (Mannheimia phage vB_MhS_1152AP2, complete genome) position: , mismatch: 0, identity: 1.0

acatcccgagccaaacggcaagcctatattatctg	CRISPR spacer
acatcccgagccaaacggcaagcctatattatctg	Protospacer
***********************************

22. spacer 1.9|1020632|35|NC_020834|CRISPRCasFinder matches to NC_028743 (Mannheimia phage vB_MhS_587AP2, complete genome) position: , mismatch: 0, identity: 1.0

acatcccgagccaaacggcaagcctatattatctg	CRISPR spacer
acatcccgagccaaacggcaagcctatattatctg	Protospacer
***********************************

23. spacer 1.15|1021028|34|NC_020834|CRISPRCasFinder matches to NC_008201 (Mannheimia phage phiMHaA1, complete genome) position: , mismatch: 0, identity: 1.0

ggtgacggttcgcccaaagccaagcaaagataat	CRISPR spacer
ggtgacggttcgcccaaagccaagcaaagataat	Protospacer
**********************************

24. spacer 1.15|1021028|34|NC_020834|CRISPRCasFinder matches to DQ426905 (Bacteriophage phi-MhaA1-BAA410, complete genome) position: , mismatch: 0, identity: 1.0

ggtgacggttcgcccaaagccaagcaaagataat	CRISPR spacer
ggtgacggttcgcccaaagccaagcaaagataat	Protospacer
**********************************

25. spacer 1.15|1021028|34|NC_020834|CRISPRCasFinder matches to KP137432 (Mannheimia phage vB_MhM_535AP1, complete genome) position: , mismatch: 0, identity: 1.0

ggtgacggttcgcccaaagccaagcaaagataat	CRISPR spacer
ggtgacggttcgcccaaagccaagcaaagataat	Protospacer
**********************************

26. spacer 1.15|1021028|34|NC_020834|CRISPRCasFinder matches to JN255163 (Mannheimia phage vB_MhM_1152AP, complete genome) position: , mismatch: 0, identity: 1.0

ggtgacggttcgcccaaagccaagcaaagataat	CRISPR spacer
ggtgacggttcgcccaaagccaagcaaagataat	Protospacer
**********************************

27. spacer 1.15|1021028|34|NC_020834|CRISPRCasFinder matches to KP137438 (Mannheimia phage vB_MhM_2256AP1, complete genome) position: , mismatch: 0, identity: 1.0

ggtgacggttcgcccaaagccaagcaaagataat	CRISPR spacer
ggtgacggttcgcccaaagccaagcaaagataat	Protospacer
**********************************

28. spacer 1.15|1021028|34|NC_020834|CRISPRCasFinder matches to NC_047750 (Mannheimia phage vB_MhM_1127AP1, complete genome) position: , mismatch: 0, identity: 1.0

ggtgacggttcgcccaaagccaagcaaagataat	CRISPR spacer
ggtgacggttcgcccaaagccaagcaaagataat	Protospacer
**********************************

29. spacer 1.15|1021028|34|NC_020834|CRISPRCasFinder matches to NC_028898 (Mannheimia phage vB_MhM_587AP1, complete genome) position: , mismatch: 0, identity: 1.0

ggtgacggttcgcccaaagccaagcaaagataat	CRISPR spacer
ggtgacggttcgcccaaagccaagcaaagataat	Protospacer
**********************************

30. spacer 1.15|1021028|34|NC_020834|CRISPRCasFinder matches to DQ426904 (Bacteriophage phi-MhaA1-PHL101, complete genome) position: , mismatch: 0, identity: 1.0

ggtgacggttcgcccaaagccaagcaaagataat	CRISPR spacer
ggtgacggttcgcccaaagccaagcaaagataat	Protospacer
**********************************

31. spacer 1.18|1021225|32|NC_020834|CRISPRCasFinder matches to NC_028853 (Mannheimia phage vB_MhS_535AP2, complete genome) position: , mismatch: 0, identity: 1.0

cgtgcgattccgatttggaccggcacggaagt	CRISPR spacer
cgtgcgattccgatttggaccggcacggaagt	Protospacer
********************************

32. spacer 1.18|1021225|32|NC_020834|CRISPRCasFinder matches to KP137439 (Mannheimia phage vB_MhS_3927AP1, complete genome) position: , mismatch: 0, identity: 1.0

cgtgcgattccgatttggaccggcacggaagt	CRISPR spacer
cgtgcgattccgatttggaccggcacggaagt	Protospacer
********************************

33. spacer 1.18|1021225|32|NC_020834|CRISPRCasFinder matches to NC_028956 (Mannheimia phage vB_MhS_1152AP2, complete genome) position: , mismatch: 0, identity: 1.0

cgtgcgattccgatttggaccggcacggaagt	CRISPR spacer
cgtgcgattccgatttggaccggcacggaagt	Protospacer
********************************

34. spacer 1.20|1021355|32|NC_020834|CRISPRCasFinder matches to NC_028853 (Mannheimia phage vB_MhS_535AP2, complete genome) position: , mismatch: 0, identity: 1.0

cgtgcgattccgatttggaccggcacggaagt	CRISPR spacer
cgtgcgattccgatttggaccggcacggaagt	Protospacer
********************************

35. spacer 1.20|1021355|32|NC_020834|CRISPRCasFinder matches to KP137439 (Mannheimia phage vB_MhS_3927AP1, complete genome) position: , mismatch: 0, identity: 1.0

cgtgcgattccgatttggaccggcacggaagt	CRISPR spacer
cgtgcgattccgatttggaccggcacggaagt	Protospacer
********************************

36. spacer 1.20|1021355|32|NC_020834|CRISPRCasFinder matches to NC_028956 (Mannheimia phage vB_MhS_1152AP2, complete genome) position: , mismatch: 0, identity: 1.0

cgtgcgattccgatttggaccggcacggaagt	CRISPR spacer
cgtgcgattccgatttggaccggcacggaagt	Protospacer
********************************

37. spacer 1.21|1021419|34|NC_020834|CRISPRCasFinder matches to NC_028766 (Mannheimia phage vB_MhM_3927AP2, complete genome) position: , mismatch: 0, identity: 1.0

gtttgcgaagatgacggcatcgagcaagaaacta	CRISPR spacer
gtttgcgaagatgacggcatcgagcaagaaacta	Protospacer
**********************************

38. spacer 1.22|1021485|34|NC_020834|CRISPRCasFinder matches to NC_028956 (Mannheimia phage vB_MhS_1152AP2, complete genome) position: , mismatch: 0, identity: 1.0

cacgcaagggttttgaagctatcggtattcctaa	CRISPR spacer
cacgcaagggttttgaagctatcggtattcctaa	Protospacer
**********************************

39. spacer 1.23|1021551|35|NC_020834|CRISPRCasFinder matches to NC_028956 (Mannheimia phage vB_MhS_1152AP2, complete genome) position: , mismatch: 0, identity: 1.0

gtctattaatgccggtttaaccagtctgaaagaac	CRISPR spacer
gtctattaatgccggtttaaccagtctgaaagaac	Protospacer
***********************************

40. spacer 1.25|1021686|36|NC_020834|CRISPRCasFinder matches to KP137439 (Mannheimia phage vB_MhS_3927AP1, complete genome) position: , mismatch: 0, identity: 1.0

aattgtacctgttgcaattaaatccccattaatcgc	CRISPR spacer
aattgtacctgttgcaattaaatccccattaatcgc	Protospacer
************************************

41. spacer 1.25|1021686|36|NC_020834|CRISPRCasFinder matches to NC_028956 (Mannheimia phage vB_MhS_1152AP2, complete genome) position: , mismatch: 0, identity: 1.0

aattgtacctgttgcaattaaatccccattaatcgc	CRISPR spacer
aattgtacctgttgcaattaaatccccattaatcgc	Protospacer
************************************

42. spacer 1.27|1021821|34|NC_020834|CRISPRCasFinder matches to NC_028956 (Mannheimia phage vB_MhS_1152AP2, complete genome) position: , mismatch: 0, identity: 1.0

tttaccgtttaccgattggattttaatgctagag	CRISPR spacer
tttaccgtttaccgattggattttaatgctagag	Protospacer
**********************************

43. spacer 1.27|1021821|34|NC_020834|CRISPRCasFinder matches to NC_028743 (Mannheimia phage vB_MhS_587AP2, complete genome) position: , mismatch: 0, identity: 1.0

tttaccgtttaccgattggattttaatgctagag	CRISPR spacer
tttaccgtttaccgattggattttaatgctagag	Protospacer
**********************************

44. spacer 1.30|1022021|37|NC_020834|CRISPRCasFinder matches to KP137439 (Mannheimia phage vB_MhS_3927AP1, complete genome) position: , mismatch: 0, identity: 1.0

aggggcgtgtaccgcaatcaattttaattataaccaa	CRISPR spacer
aggggcgtgtaccgcaatcaattttaattataaccaa	Protospacer
*************************************

45. spacer 1.30|1022021|37|NC_020834|CRISPRCasFinder matches to NC_028956 (Mannheimia phage vB_MhS_1152AP2, complete genome) position: , mismatch: 0, identity: 1.0

aggggcgtgtaccgcaatcaattttaattataaccaa	CRISPR spacer
aggggcgtgtaccgcaatcaattttaattataaccaa	Protospacer
*************************************

46. spacer 1.37|1020363|37|NC_020834|PILER-CR,CRT matches to NC_008201 (Mannheimia phage phiMHaA1, complete genome) position: , mismatch: 0, identity: 1.0

caccgctgctacttcggttatcggagtagtttgcacc	CRISPR spacer
caccgctgctacttcggttatcggagtagtttgcacc	Protospacer
*************************************

47. spacer 1.37|1020363|37|NC_020834|PILER-CR,CRT matches to DQ426905 (Bacteriophage phi-MhaA1-BAA410, complete genome) position: , mismatch: 0, identity: 1.0

caccgctgctacttcggttatcggagtagtttgcacc	CRISPR spacer
caccgctgctacttcggttatcggagtagtttgcacc	Protospacer
*************************************

48. spacer 1.37|1020363|37|NC_020834|PILER-CR,CRT matches to KP137432 (Mannheimia phage vB_MhM_535AP1, complete genome) position: , mismatch: 0, identity: 1.0

caccgctgctacttcggttatcggagtagtttgcacc	CRISPR spacer
caccgctgctacttcggttatcggagtagtttgcacc	Protospacer
*************************************

49. spacer 1.37|1020363|37|NC_020834|PILER-CR,CRT matches to JN255163 (Mannheimia phage vB_MhM_1152AP, complete genome) position: , mismatch: 0, identity: 1.0

caccgctgctacttcggttatcggagtagtttgcacc	CRISPR spacer
caccgctgctacttcggttatcggagtagtttgcacc	Protospacer
*************************************

50. spacer 1.37|1020363|37|NC_020834|PILER-CR,CRT matches to KP137438 (Mannheimia phage vB_MhM_2256AP1, complete genome) position: , mismatch: 0, identity: 1.0

caccgctgctacttcggttatcggagtagtttgcacc	CRISPR spacer
caccgctgctacttcggttatcggagtagtttgcacc	Protospacer
*************************************

51. spacer 1.37|1020363|37|NC_020834|PILER-CR,CRT matches to DQ426904 (Bacteriophage phi-MhaA1-PHL101, complete genome) position: , mismatch: 0, identity: 1.0

caccgctgctacttcggttatcggagtagtttgcacc	CRISPR spacer
caccgctgctacttcggttatcggagtagtttgcacc	Protospacer
*************************************

52. spacer 1.41|1020632|36|NC_020834|PILER-CR,CRT matches to NC_028853 (Mannheimia phage vB_MhS_535AP2, complete genome) position: , mismatch: 0, identity: 1.0

acatcccgagccaaacggcaagcctatattatctgt	CRISPR spacer
acatcccgagccaaacggcaagcctatattatctgt	Protospacer
************************************

53. spacer 1.41|1020632|36|NC_020834|PILER-CR,CRT matches to KP137439 (Mannheimia phage vB_MhS_3927AP1, complete genome) position: , mismatch: 0, identity: 1.0

acatcccgagccaaacggcaagcctatattatctgt	CRISPR spacer
acatcccgagccaaacggcaagcctatattatctgt	Protospacer
************************************

54. spacer 1.41|1020632|36|NC_020834|PILER-CR,CRT matches to NC_028956 (Mannheimia phage vB_MhS_1152AP2, complete genome) position: , mismatch: 0, identity: 1.0

acatcccgagccaaacggcaagcctatattatctgt	CRISPR spacer
acatcccgagccaaacggcaagcctatattatctgt	Protospacer
************************************

55. spacer 1.41|1020632|36|NC_020834|PILER-CR,CRT matches to NC_028743 (Mannheimia phage vB_MhS_587AP2, complete genome) position: , mismatch: 0, identity: 1.0

acatcccgagccaaacggcaagcctatattatctgt	CRISPR spacer
acatcccgagccaaacggcaagcctatattatctgt	Protospacer
************************************

56. spacer 1.47|1021028|35|NC_020834|PILER-CR,CRT matches to NC_008201 (Mannheimia phage phiMHaA1, complete genome) position: , mismatch: 0, identity: 1.0

ggtgacggttcgcccaaagccaagcaaagataatg	CRISPR spacer
ggtgacggttcgcccaaagccaagcaaagataatg	Protospacer
***********************************

57. spacer 1.47|1021028|35|NC_020834|PILER-CR,CRT matches to DQ426905 (Bacteriophage phi-MhaA1-BAA410, complete genome) position: , mismatch: 0, identity: 1.0

ggtgacggttcgcccaaagccaagcaaagataatg	CRISPR spacer
ggtgacggttcgcccaaagccaagcaaagataatg	Protospacer
***********************************

58. spacer 1.47|1021028|35|NC_020834|PILER-CR,CRT matches to KP137432 (Mannheimia phage vB_MhM_535AP1, complete genome) position: , mismatch: 0, identity: 1.0

ggtgacggttcgcccaaagccaagcaaagataatg	CRISPR spacer
ggtgacggttcgcccaaagccaagcaaagataatg	Protospacer
***********************************

59. spacer 1.47|1021028|35|NC_020834|PILER-CR,CRT matches to JN255163 (Mannheimia phage vB_MhM_1152AP, complete genome) position: , mismatch: 0, identity: 1.0

ggtgacggttcgcccaaagccaagcaaagataatg	CRISPR spacer
ggtgacggttcgcccaaagccaagcaaagataatg	Protospacer
***********************************

60. spacer 1.47|1021028|35|NC_020834|PILER-CR,CRT matches to KP137438 (Mannheimia phage vB_MhM_2256AP1, complete genome) position: , mismatch: 0, identity: 1.0

ggtgacggttcgcccaaagccaagcaaagataatg	CRISPR spacer
ggtgacggttcgcccaaagccaagcaaagataatg	Protospacer
***********************************

61. spacer 1.47|1021028|35|NC_020834|PILER-CR,CRT matches to NC_047750 (Mannheimia phage vB_MhM_1127AP1, complete genome) position: , mismatch: 0, identity: 1.0

ggtgacggttcgcccaaagccaagcaaagataatg	CRISPR spacer
ggtgacggttcgcccaaagccaagcaaagataatg	Protospacer
***********************************

62. spacer 1.47|1021028|35|NC_020834|PILER-CR,CRT matches to NC_028898 (Mannheimia phage vB_MhM_587AP1, complete genome) position: , mismatch: 0, identity: 1.0

ggtgacggttcgcccaaagccaagcaaagataatg	CRISPR spacer
ggtgacggttcgcccaaagccaagcaaagataatg	Protospacer
***********************************

63. spacer 1.47|1021028|35|NC_020834|PILER-CR,CRT matches to DQ426904 (Bacteriophage phi-MhaA1-PHL101, complete genome) position: , mismatch: 0, identity: 1.0

ggtgacggttcgcccaaagccaagcaaagataatg	CRISPR spacer
ggtgacggttcgcccaaagccaagcaaagataatg	Protospacer
***********************************

64. spacer 1.50|1021225|33|NC_020834|PILER-CR,CRT matches to NC_028853 (Mannheimia phage vB_MhS_535AP2, complete genome) position: , mismatch: 0, identity: 1.0

cgtgcgattccgatttggaccggcacggaagtc	CRISPR spacer
cgtgcgattccgatttggaccggcacggaagtc	Protospacer
*********************************

65. spacer 1.50|1021225|33|NC_020834|PILER-CR,CRT matches to KP137439 (Mannheimia phage vB_MhS_3927AP1, complete genome) position: , mismatch: 0, identity: 1.0

cgtgcgattccgatttggaccggcacggaagtc	CRISPR spacer
cgtgcgattccgatttggaccggcacggaagtc	Protospacer
*********************************

66. spacer 1.50|1021225|33|NC_020834|PILER-CR,CRT matches to NC_028956 (Mannheimia phage vB_MhS_1152AP2, complete genome) position: , mismatch: 0, identity: 1.0

cgtgcgattccgatttggaccggcacggaagtc	CRISPR spacer
cgtgcgattccgatttggaccggcacggaagtc	Protospacer
*********************************

67. spacer 1.52|1021355|33|NC_020834|PILER-CR,CRT matches to NC_028853 (Mannheimia phage vB_MhS_535AP2, complete genome) position: , mismatch: 0, identity: 1.0

cgtgcgattccgatttggaccggcacggaagtc	CRISPR spacer
cgtgcgattccgatttggaccggcacggaagtc	Protospacer
*********************************

68. spacer 1.52|1021355|33|NC_020834|PILER-CR,CRT matches to KP137439 (Mannheimia phage vB_MhS_3927AP1, complete genome) position: , mismatch: 0, identity: 1.0

cgtgcgattccgatttggaccggcacggaagtc	CRISPR spacer
cgtgcgattccgatttggaccggcacggaagtc	Protospacer
*********************************

69. spacer 1.52|1021355|33|NC_020834|PILER-CR,CRT matches to NC_028956 (Mannheimia phage vB_MhS_1152AP2, complete genome) position: , mismatch: 0, identity: 1.0

cgtgcgattccgatttggaccggcacggaagtc	CRISPR spacer
cgtgcgattccgatttggaccggcacggaagtc	Protospacer
*********************************

70. spacer 1.53|1021419|35|NC_020834|PILER-CR,CRT matches to NC_028766 (Mannheimia phage vB_MhM_3927AP2, complete genome) position: , mismatch: 0, identity: 1.0

gtttgcgaagatgacggcatcgagcaagaaactat	CRISPR spacer
gtttgcgaagatgacggcatcgagcaagaaactat	Protospacer
***********************************

71. spacer 1.1|1020097|34|NC_020834|CRISPRCasFinder matches to NC_008201 (Mannheimia phage phiMHaA1, complete genome) position: , mismatch: 1, identity: 0.971

gtcaatttcagcaattcgcccacggcagactaac	CRISPR spacer
gtcaatttcagcgattcgcccacggcagactaac	Protospacer
************.*********************

72. spacer 1.1|1020097|34|NC_020834|CRISPRCasFinder matches to DQ426905 (Bacteriophage phi-MhaA1-BAA410, complete genome) position: , mismatch: 1, identity: 0.971

gtcaatttcagcaattcgcccacggcagactaac	CRISPR spacer
gtcaatttcagcgattcgcccacggcagactaac	Protospacer
************.*********************

73. spacer 1.1|1020097|34|NC_020834|CRISPRCasFinder matches to KP137432 (Mannheimia phage vB_MhM_535AP1, complete genome) position: , mismatch: 1, identity: 0.971

gtcaatttcagcaattcgcccacggcagactaac	CRISPR spacer
gtcaatttcagcgattcgcccacggcagactaac	Protospacer
************.*********************

74. spacer 1.1|1020097|34|NC_020834|CRISPRCasFinder matches to JN255163 (Mannheimia phage vB_MhM_1152AP, complete genome) position: , mismatch: 1, identity: 0.971

gtcaatttcagcaattcgcccacggcagactaac	CRISPR spacer
gtcaatttcagcgattcgcccacggcagactaac	Protospacer
************.*********************

75. spacer 1.1|1020097|34|NC_020834|CRISPRCasFinder matches to KP137438 (Mannheimia phage vB_MhM_2256AP1, complete genome) position: , mismatch: 1, identity: 0.971

gtcaatttcagcaattcgcccacggcagactaac	CRISPR spacer
gtcaatttcagcgattcgcccacggcagactaac	Protospacer
************.*********************

76. spacer 1.1|1020097|34|NC_020834|CRISPRCasFinder matches to NC_047750 (Mannheimia phage vB_MhM_1127AP1, complete genome) position: , mismatch: 1, identity: 0.971

gtcaatttcagcaattcgcccacggcagactaac	CRISPR spacer
gtcaatttcagcgattcgcccacggcagactaac	Protospacer
************.*********************

77. spacer 1.1|1020097|34|NC_020834|CRISPRCasFinder matches to NC_028898 (Mannheimia phage vB_MhM_587AP1, complete genome) position: , mismatch: 1, identity: 0.971

gtcaatttcagcaattcgcccacggcagactaac	CRISPR spacer
gtcaatttcagcgattcgcccacggcagactaac	Protospacer
************.*********************

78. spacer 1.1|1020097|34|NC_020834|CRISPRCasFinder matches to DQ426904 (Bacteriophage phi-MhaA1-PHL101, complete genome) position: , mismatch: 1, identity: 0.971

gtcaatttcagcaattcgcccacggcagactaac	CRISPR spacer
gtcaatttcagcgattcgcccacggcagactaac	Protospacer
************.*********************

79. spacer 1.11|1020766|34|NC_020834|CRISPRCasFinder matches to NC_047750 (Mannheimia phage vB_MhM_1127AP1, complete genome) position: , mismatch: 1, identity: 0.971

cagcagtctgtgcgaacagctcaaatcattaaag	CRISPR spacer
cagcagtcggtgcgaacagctcaaatcattaaag	Protospacer
******** *************************

80. spacer 1.11|1020766|34|NC_020834|CRISPRCasFinder matches to NC_028898 (Mannheimia phage vB_MhM_587AP1, complete genome) position: , mismatch: 1, identity: 0.971

cagcagtctgtgcgaacagctcaaatcattaaag	CRISPR spacer
cagcagtcggtgcgaacagctcaaatcattaaag	Protospacer
******** *************************

81. spacer 1.14|1020962|34|NC_020834|CRISPRCasFinder matches to NC_047750 (Mannheimia phage vB_MhM_1127AP1, complete genome) position: , mismatch: 1, identity: 0.971

cagcagtctgtgcgaacagctcaaatcattaaag	CRISPR spacer
cagcagtcggtgcgaacagctcaaatcattaaag	Protospacer
******** *************************

82. spacer 1.14|1020962|34|NC_020834|CRISPRCasFinder matches to NC_028898 (Mannheimia phage vB_MhM_587AP1, complete genome) position: , mismatch: 1, identity: 0.971

cagcagtctgtgcgaacagctcaaatcattaaag	CRISPR spacer
cagcagtcggtgcgaacagctcaaatcattaaag	Protospacer
******** *************************

83. spacer 1.38|1020431|36|NC_020834|PILER-CR,CRT matches to NC_008201 (Mannheimia phage phiMHaA1, complete genome) position: , mismatch: 1, identity: 0.972

gtggcacagtaacacgagcagatgctgataaacgcc	CRISPR spacer
gtggcacagtaacacgagcagatgctgataaacgct	Protospacer
***********************************.

84. spacer 1.38|1020431|36|NC_020834|PILER-CR,CRT matches to DQ426905 (Bacteriophage phi-MhaA1-BAA410, complete genome) position: , mismatch: 1, identity: 0.972

gtggcacagtaacacgagcagatgctgataaacgcc	CRISPR spacer
gtggcacagtaacacgagcagatgctgataaacgct	Protospacer
***********************************.

85. spacer 1.38|1020431|36|NC_020834|PILER-CR,CRT matches to KP137432 (Mannheimia phage vB_MhM_535AP1, complete genome) position: , mismatch: 1, identity: 0.972

gtggcacagtaacacgagcagatgctgataaacgcc	CRISPR spacer
gtggcacagtaacacgagcagatgctgataaacgct	Protospacer
***********************************.

86. spacer 1.38|1020431|36|NC_020834|PILER-CR,CRT matches to JN255163 (Mannheimia phage vB_MhM_1152AP, complete genome) position: , mismatch: 1, identity: 0.972

gtggcacagtaacacgagcagatgctgataaacgcc	CRISPR spacer
gtggcacagtaacacgagcagatgctgataaacgct	Protospacer
***********************************.

87. spacer 1.38|1020431|36|NC_020834|PILER-CR,CRT matches to KP137438 (Mannheimia phage vB_MhM_2256AP1, complete genome) position: , mismatch: 1, identity: 0.972

gtggcacagtaacacgagcagatgctgataaacgcc	CRISPR spacer
gtggcacagtaacacgagcagatgctgataaacgct	Protospacer
***********************************.

88. spacer 1.38|1020431|36|NC_020834|PILER-CR,CRT matches to DQ426904 (Bacteriophage phi-MhaA1-PHL101, complete genome) position: , mismatch: 1, identity: 0.972

gtggcacagtaacacgagcagatgctgataaacgcc	CRISPR spacer
gtggcacagtaacacgagcagatgctgataaacgct	Protospacer
***********************************.

89. spacer 1.39|1020498|35|NC_020834|PILER-CR,CRT matches to NC_008201 (Mannheimia phage phiMHaA1, complete genome) position: , mismatch: 1, identity: 0.971

cagcagccgttgttaccgtggtgcaatgcttgcgc	CRISPR spacer
cagcagccgttgttaccgtggtgcaatgcttgcgg	Protospacer
********************************** 

90. spacer 1.39|1020498|35|NC_020834|PILER-CR,CRT matches to DQ426905 (Bacteriophage phi-MhaA1-BAA410, complete genome) position: , mismatch: 1, identity: 0.971

cagcagccgttgttaccgtggtgcaatgcttgcgc	CRISPR spacer
cagcagccgttgttaccgtggtgcaatgcttgcgg	Protospacer
********************************** 

91. spacer 1.39|1020498|35|NC_020834|PILER-CR,CRT matches to KP137432 (Mannheimia phage vB_MhM_535AP1, complete genome) position: , mismatch: 1, identity: 0.971

cagcagccgttgttaccgtggtgcaatgcttgcgc	CRISPR spacer
cagcagccgttgttaccgtggtgcaatgcttgcgg	Protospacer
********************************** 

92. spacer 1.39|1020498|35|NC_020834|PILER-CR,CRT matches to JN255163 (Mannheimia phage vB_MhM_1152AP, complete genome) position: , mismatch: 1, identity: 0.971

cagcagccgttgttaccgtggtgcaatgcttgcgc	CRISPR spacer
cagcagccgttgttaccgtggtgcaatgcttgcgg	Protospacer
********************************** 

93. spacer 1.39|1020498|35|NC_020834|PILER-CR,CRT matches to KP137438 (Mannheimia phage vB_MhM_2256AP1, complete genome) position: , mismatch: 1, identity: 0.971

cagcagccgttgttaccgtggtgcaatgcttgcgc	CRISPR spacer
cagcagccgttgttaccgtggtgcaatgcttgcgg	Protospacer
********************************** 

94. spacer 1.39|1020498|35|NC_020834|PILER-CR,CRT matches to DQ426904 (Bacteriophage phi-MhaA1-PHL101, complete genome) position: , mismatch: 1, identity: 0.971

cagcagccgttgttaccgtggtgcaatgcttgcgc	CRISPR spacer
cagcagccgttgttaccgtggtgcaatgcttgcgg	Protospacer
********************************** 

95. spacer 1.43|1020766|35|NC_020834|PILER-CR,CRT matches to NC_047750 (Mannheimia phage vB_MhM_1127AP1, complete genome) position: , mismatch: 1, identity: 0.971

cagcagtctgtgcgaacagctcaaatcattaaaga	CRISPR spacer
cagcagtcggtgcgaacagctcaaatcattaaaga	Protospacer
******** **************************

96. spacer 1.43|1020766|35|NC_020834|PILER-CR,CRT matches to NC_028898 (Mannheimia phage vB_MhM_587AP1, complete genome) position: , mismatch: 1, identity: 0.971

cagcagtctgtgcgaacagctcaaatcattaaaga	CRISPR spacer
cagcagtcggtgcgaacagctcaaatcattaaaga	Protospacer
******** **************************

97. spacer 1.46|1020962|35|NC_020834|PILER-CR,CRT matches to NC_047750 (Mannheimia phage vB_MhM_1127AP1, complete genome) position: , mismatch: 1, identity: 0.971

cagcagtctgtgcgaacagctcaaatcattaaaga	CRISPR spacer
cagcagtcggtgcgaacagctcaaatcattaaaga	Protospacer
******** **************************

98. spacer 1.46|1020962|35|NC_020834|PILER-CR,CRT matches to NC_028898 (Mannheimia phage vB_MhM_587AP1, complete genome) position: , mismatch: 1, identity: 0.971

cagcagtctgtgcgaacagctcaaatcattaaaga	CRISPR spacer
cagcagtcggtgcgaacagctcaaatcattaaaga	Protospacer
******** **************************

99. spacer 1.54|1021485|35|NC_020834|PILER-CR,CRT matches to NC_028956 (Mannheimia phage vB_MhS_1152AP2, complete genome) position: , mismatch: 1, identity: 0.971

cacgcaagggttttgaagctatcggtattcctaag	CRISPR spacer
cacgcaagggttttgaagctatcggtattcctaaa	Protospacer
**********************************.

100. spacer 1.55|1021551|36|NC_020834|PILER-CR,CRT matches to NC_028956 (Mannheimia phage vB_MhS_1152AP2, complete genome) position: , mismatch: 1, identity: 0.972

gtctattaatgccggtttaaccagtctgaaagaacg	CRISPR spacer
gtctattaatgccggtttaaccagtctgaaagaact	Protospacer
*********************************** 

101. spacer 1.57|1021686|37|NC_020834|PILER-CR,CRT matches to KP137439 (Mannheimia phage vB_MhS_3927AP1, complete genome) position: , mismatch: 1, identity: 0.973

aattgtacctgttgcaattaaatccccattaatcgcg	CRISPR spacer
aattgtacctgttgcaattaaatccccattaatcgca	Protospacer
************************************.

102. spacer 1.57|1021686|37|NC_020834|PILER-CR,CRT matches to NC_028956 (Mannheimia phage vB_MhS_1152AP2, complete genome) position: , mismatch: 1, identity: 0.973

aattgtacctgttgcaattaaatccccattaatcgcg	CRISPR spacer
aattgtacctgttgcaattaaatccccattaatcgca	Protospacer
************************************.

103. spacer 1.59|1021821|35|NC_020834|PILER-CR,CRT matches to NC_028956 (Mannheimia phage vB_MhS_1152AP2, complete genome) position: , mismatch: 1, identity: 0.971

tttaccgtttaccgattggattttaatgctagagg	CRISPR spacer
tttaccgtttaccgattggattttaatgctagagt	Protospacer
********************************** 

104. spacer 1.59|1021821|35|NC_020834|PILER-CR,CRT matches to NC_028743 (Mannheimia phage vB_MhS_587AP2, complete genome) position: , mismatch: 1, identity: 0.971

tttaccgtttaccgattggattttaatgctagagg	CRISPR spacer
tttaccgtttaccgattggattttaatgctagagt	Protospacer
********************************** 

105. spacer 1.62|1022021|38|NC_020834|PILER-CR,CRT matches to KP137439 (Mannheimia phage vB_MhS_3927AP1, complete genome) position: , mismatch: 1, identity: 0.974

aggggcgtgtaccgcaatcaattttaattataaccaag	CRISPR spacer
aggggcgtgtaccgcaatcaattttaattataaccaat	Protospacer
************************************* 

106. spacer 1.62|1022021|38|NC_020834|PILER-CR,CRT matches to NC_028956 (Mannheimia phage vB_MhS_1152AP2, complete genome) position: , mismatch: 1, identity: 0.974

aggggcgtgtaccgcaatcaattttaattataaccaag	CRISPR spacer
aggggcgtgtaccgcaatcaattttaattataaccaat	Protospacer
************************************* 

107. spacer 1.18|1021225|32|NC_020834|CRISPRCasFinder matches to NC_028743 (Mannheimia phage vB_MhS_587AP2, complete genome) position: , mismatch: 2, identity: 0.938

cgtgcgattccgatttggaccggcacggaagt	CRISPR spacer
cgtgcgattccgatttggaccggaacagaagt	Protospacer
*********************** **.*****

108. spacer 1.20|1021355|32|NC_020834|CRISPRCasFinder matches to NC_028743 (Mannheimia phage vB_MhS_587AP2, complete genome) position: , mismatch: 2, identity: 0.938

cgtgcgattccgatttggaccggcacggaagt	CRISPR spacer
cgtgcgattccgatttggaccggaacagaagt	Protospacer
*********************** **.*****

109. spacer 1.33|1020097|35|NC_020834|PILER-CR,CRT matches to NC_008201 (Mannheimia phage phiMHaA1, complete genome) position: , mismatch: 2, identity: 0.943

gtcaatttcagcaattcgcccacggcagactaacc	CRISPR spacer
gtcaatttcagcgattcgcccacggcagactaact	Protospacer
************.*********************.

110. spacer 1.33|1020097|35|NC_020834|PILER-CR,CRT matches to DQ426905 (Bacteriophage phi-MhaA1-BAA410, complete genome) position: , mismatch: 2, identity: 0.943

gtcaatttcagcaattcgcccacggcagactaacc	CRISPR spacer
gtcaatttcagcgattcgcccacggcagactaact	Protospacer
************.*********************.

111. spacer 1.33|1020097|35|NC_020834|PILER-CR,CRT matches to KP137432 (Mannheimia phage vB_MhM_535AP1, complete genome) position: , mismatch: 2, identity: 0.943

gtcaatttcagcaattcgcccacggcagactaacc	CRISPR spacer
gtcaatttcagcgattcgcccacggcagactaact	Protospacer
************.*********************.

112. spacer 1.33|1020097|35|NC_020834|PILER-CR,CRT matches to JN255163 (Mannheimia phage vB_MhM_1152AP, complete genome) position: , mismatch: 2, identity: 0.943

gtcaatttcagcaattcgcccacggcagactaacc	CRISPR spacer
gtcaatttcagcgattcgcccacggcagactaact	Protospacer
************.*********************.

113. spacer 1.33|1020097|35|NC_020834|PILER-CR,CRT matches to KP137438 (Mannheimia phage vB_MhM_2256AP1, complete genome) position: , mismatch: 2, identity: 0.943

gtcaatttcagcaattcgcccacggcagactaacc	CRISPR spacer
gtcaatttcagcgattcgcccacggcagactaact	Protospacer
************.*********************.

114. spacer 1.33|1020097|35|NC_020834|PILER-CR,CRT matches to NC_047750 (Mannheimia phage vB_MhM_1127AP1, complete genome) position: , mismatch: 2, identity: 0.943

gtcaatttcagcaattcgcccacggcagactaacc	CRISPR spacer
gtcaatttcagcgattcgcccacggcagactaact	Protospacer
************.*********************.

115. spacer 1.33|1020097|35|NC_020834|PILER-CR,CRT matches to NC_028898 (Mannheimia phage vB_MhM_587AP1, complete genome) position: , mismatch: 2, identity: 0.943

gtcaatttcagcaattcgcccacggcagactaacc	CRISPR spacer
gtcaatttcagcgattcgcccacggcagactaact	Protospacer
************.*********************.

116. spacer 1.33|1020097|35|NC_020834|PILER-CR,CRT matches to DQ426904 (Bacteriophage phi-MhaA1-PHL101, complete genome) position: , mismatch: 2, identity: 0.943

gtcaatttcagcaattcgcccacggcagactaacc	CRISPR spacer
gtcaatttcagcgattcgcccacggcagactaact	Protospacer
************.*********************.

117. spacer 1.4|1020295|36|NC_020834|CRISPRCasFinder matches to NC_028743 (Mannheimia phage vB_MhS_587AP2, complete genome) position: , mismatch: 3, identity: 0.917

ggcaaggtcgagtttcatttggttggagatactaac	CRISPR spacer
ggcaaggtcgagtttcatttggttagaaatactaat	Protospacer
************************.**.*******.

118. spacer 1.50|1021225|33|NC_020834|PILER-CR,CRT matches to NC_028743 (Mannheimia phage vB_MhS_587AP2, complete genome) position: , mismatch: 3, identity: 0.909

cgtgcgattccgatttggaccggcacggaagtc	CRISPR spacer
cgtgcgattccgatttggaccggaacagaagta	Protospacer
*********************** **.***** 

119. spacer 1.52|1021355|33|NC_020834|PILER-CR,CRT matches to NC_028743 (Mannheimia phage vB_MhS_587AP2, complete genome) position: , mismatch: 3, identity: 0.909

cgtgcgattccgatttggaccggcacggaagtc	CRISPR spacer
cgtgcgattccgatttggaccggaacagaagta	Protospacer
*********************** **.***** 

120. spacer 1.36|1020295|37|NC_020834|PILER-CR,CRT matches to NC_028743 (Mannheimia phage vB_MhS_587AP2, complete genome) position: , mismatch: 4, identity: 0.892

ggcaaggtcgagtttcatttggttggagatactaacc	CRISPR spacer
ggcaaggtcgagtttcatttggttagaaatactaatt	Protospacer
************************.**.*******..

121. spacer 2.1|1415597|29|NC_020834|CRISPRCasFinder matches to MH791397 (UNVERIFIED: Enterococcus phage EfsSzw-1, complete genome) position: , mismatch: 5, identity: 0.828

agacctgatactaatctagggtataaaga	CRISPR spacer
aaacctcataataatctagggtataaggc	Protospacer
*.**** *** ***************.* 

122. spacer 3.1|1653091|29|NC_020834|CRISPRCasFinder matches to MH791397 (UNVERIFIED: Enterococcus phage EfsSzw-1, complete genome) position: , mismatch: 5, identity: 0.828

tctttataccctagattagtatcaggtct	CRISPR spacer
gccttataccctagattattatgaggttt	Protospacer
 *.*************** *** ****.*

123. spacer 1.7|1020498|34|NC_020834|CRISPRCasFinder matches to NC_047750 (Mannheimia phage vB_MhM_1127AP1, complete genome) position: , mismatch: 6, identity: 0.824

cagcagccgttgttaccgtggtgcaatgcttgcg	CRISPR spacer
ttctagccgttgctaccgtggtgcagtgcttgcg	Protospacer
.  .********.************.********

124. spacer 1.7|1020498|34|NC_020834|CRISPRCasFinder matches to NC_028898 (Mannheimia phage vB_MhM_587AP1, complete genome) position: , mismatch: 6, identity: 0.824

cagcagccgttgttaccgtggtgcaatgcttgcg	CRISPR spacer
ttctagccgttgctaccgtggtgcagtgcttgcg	Protospacer
.  .********.************.********

125. spacer 1.12|1020832|33|NC_020834|CRISPRCasFinder matches to EF694690 (Campylobacter phage CGC-2007 isolate Cj00-6470 cje0216, cje0217, cje0218, cje0219, cje0220, cje0221, cje0222, cje0223, cje0224, cje0225, cje0226, cje0227, and cje0228 genes, complete cds; cje0229 gene, partial cds; cje0230 and cje0231 genes, complete cds; and cje0232 gene, partial cds) position: , mismatch: 6, identity: 0.818

ttcttattttttgtattttttagatttttatta	CRISPR spacer
tttgtattttttgtattttttgtattttttgta	Protospacer
**. *****************. ******  **

126. spacer 1.12|1020832|33|NC_020834|CRISPRCasFinder matches to EF694690 (Campylobacter phage CGC-2007 isolate Cj00-6470 cje0216, cje0217, cje0218, cje0219, cje0220, cje0221, cje0222, cje0223, cje0224, cje0225, cje0226, cje0227, and cje0228 genes, complete cds; cje0229 gene, partial cds; cje0230 and cje0231 genes, complete cds; and cje0232 gene, partial cds) position: , mismatch: 6, identity: 0.818

ttcttattttttgtattttttagatttttatta	CRISPR spacer
tttgtattttttgtattttttgtattttttgta	Protospacer
**. *****************. ******  **

127. spacer 1.12|1020832|33|NC_020834|CRISPRCasFinder matches to NZ_CP021063 (Bacillus thuringiensis strain ATCC 10792 plasmid poh2, complete sequence) position: , mismatch: 7, identity: 0.788

ttcttattttttgtattttttagatttttatta	CRISPR spacer
ttatatttttttatattttttacatttttatat	Protospacer
** *  ******.********* ********  

128. spacer 1.12|1020832|33|NC_020834|CRISPRCasFinder matches to EF694690 (Campylobacter phage CGC-2007 isolate Cj00-6470 cje0216, cje0217, cje0218, cje0219, cje0220, cje0221, cje0222, cje0223, cje0224, cje0225, cje0226, cje0227, and cje0228 genes, complete cds; cje0229 gene, partial cds; cje0230 and cje0231 genes, complete cds; and cje0232 gene, partial cds) position: , mismatch: 7, identity: 0.788

ttcttattttttgtattttttagatttttatta	CRISPR spacer
tttgtattttttgtattttttgtattttttgtt	Protospacer
**. *****************. ******  * 

129. spacer 1.12|1020832|33|NC_020834|CRISPRCasFinder matches to EF694690 (Campylobacter phage CGC-2007 isolate Cj00-6470 cje0216, cje0217, cje0218, cje0219, cje0220, cje0221, cje0222, cje0223, cje0224, cje0225, cje0226, cje0227, and cje0228 genes, complete cds; cje0229 gene, partial cds; cje0230 and cje0231 genes, complete cds; and cje0232 gene, partial cds) position: , mismatch: 7, identity: 0.788

ttcttattttttgtattttttagatttttatta	CRISPR spacer
tttacattttttgtattttttgtattttttgta	Protospacer
**. .****************. ******  **

130. spacer 1.12|1020832|33|NC_020834|CRISPRCasFinder matches to CP020756 (Bacillus thuringiensis strain ATCC 10792 plasmid pLDW-17, complete sequence) position: , mismatch: 7, identity: 0.788

ttcttattttttgtattttttagatttttatta	CRISPR spacer
ttatatttttttatattttttacatttttatat	Protospacer
** *  ******.********* ********  

131. spacer 1.12|1020832|33|NC_020834|CRISPRCasFinder matches to NZ_CP013615 (Clostridium perfringens strain JP838 plasmid pJFP838A, complete sequence) position: , mismatch: 7, identity: 0.788

ttcttattttttgtattttttagatttttatta	CRISPR spacer
ttatatatttttgtattttttacattttgataa	Protospacer
** *   *************** ***** ** *

132. spacer 1.39|1020498|35|NC_020834|PILER-CR,CRT matches to NC_047750 (Mannheimia phage vB_MhM_1127AP1, complete genome) position: , mismatch: 7, identity: 0.8

cagcagccgttgttaccgtggtgcaatgcttgcgc	CRISPR spacer
ttctagccgttgctaccgtggtgcagtgcttgcgg	Protospacer
.  .********.************.******** 

133. spacer 1.39|1020498|35|NC_020834|PILER-CR,CRT matches to NC_028898 (Mannheimia phage vB_MhM_587AP1, complete genome) position: , mismatch: 7, identity: 0.8

cagcagccgttgttaccgtggtgcaatgcttgcgc	CRISPR spacer
ttctagccgttgctaccgtggtgcagtgcttgcgg	Protospacer
.  .********.************.******** 

134. spacer 1.44|1020832|34|NC_020834|PILER-CR,CRT matches to EF694690 (Campylobacter phage CGC-2007 isolate Cj00-6470 cje0216, cje0217, cje0218, cje0219, cje0220, cje0221, cje0222, cje0223, cje0224, cje0225, cje0226, cje0227, and cje0228 genes, complete cds; cje0229 gene, partial cds; cje0230 and cje0231 genes, complete cds; and cje0232 gene, partial cds) position: , mismatch: 7, identity: 0.794

ttcttattttttgtattttttagatttttattaa	CRISPR spacer
tttgtattttttgtattttttgtattttttgtat	Protospacer
**. *****************. ******  ** 

135. spacer 1.44|1020832|34|NC_020834|PILER-CR,CRT matches to EF694690 (Campylobacter phage CGC-2007 isolate Cj00-6470 cje0216, cje0217, cje0218, cje0219, cje0220, cje0221, cje0222, cje0223, cje0224, cje0225, cje0226, cje0227, and cje0228 genes, complete cds; cje0229 gene, partial cds; cje0230 and cje0231 genes, complete cds; and cje0232 gene, partial cds) position: , mismatch: 7, identity: 0.794

ttcttattttttgtattttttagatttttattaa	CRISPR spacer
tttgtattttttgtattttttgtattttttgtat	Protospacer
**. *****************. ******  ** 

136. spacer 1.12|1020832|33|NC_020834|CRISPRCasFinder matches to NC_011412 (Clostridium perfringens plasmid pCP8533etx, complete sequence) position: , mismatch: 8, identity: 0.758

ttcttattttttgtattttttagatttttatta	CRISPR spacer
tatcgactttttttattttttagatttatattt	Protospacer
* .. *.***** ************** **** 

137. spacer 1.12|1020832|33|NC_020834|CRISPRCasFinder matches to MH616940 (Microviridae sp. isolate ctdg534, complete genome) position: , mismatch: 8, identity: 0.758

ttcttattttttgtattttttagatttttatta	CRISPR spacer
tctgtattttttgtattttttgtattttttgaa	Protospacer
*.. *****************. ******   *

138. spacer 1.12|1020832|33|NC_020834|CRISPRCasFinder matches to NC_014533 (Gloeothece verrucosa PCC 7822 plasmid Cy782201, complete sequence) position: , mismatch: 8, identity: 0.758

ttcttattttttgtattttttagatttttatta	CRISPR spacer
agcaaattttttgaattttttaaattttttcta	Protospacer
  *  ******** ********.****** .**

139. spacer 1.12|1020832|33|NC_020834|CRISPRCasFinder matches to KX229736 (Campylobacter phage PC5, complete genome) position: , mismatch: 8, identity: 0.758

ttcttattttttgtattttttagatttttatta	CRISPR spacer
tagtgattttgtgtattttttagatgtttcgaa	Protospacer
*  * ***** ************** ***   *

140. spacer 1.12|1020832|33|NC_020834|CRISPRCasFinder matches to MT773556 (Myoviridae sp. isolate BML_4 genomic sequence) position: , mismatch: 8, identity: 0.758

ttcttattttttgtattttttagatttttatta	CRISPR spacer
tttgtattttttgaatattttagattttacaaa	Protospacer
**. ********* ** ***********    *

141. spacer 1.44|1020832|34|NC_020834|PILER-CR,CRT matches to NZ_CP021063 (Bacillus thuringiensis strain ATCC 10792 plasmid poh2, complete sequence) position: , mismatch: 8, identity: 0.765

ttcttattttttgtattttttagatttttattaa	CRISPR spacer
ttatatttttttatattttttacatttttatatg	Protospacer
** *  ******.********* ********  .

142. spacer 1.44|1020832|34|NC_020834|PILER-CR,CRT matches to EF694690 (Campylobacter phage CGC-2007 isolate Cj00-6470 cje0216, cje0217, cje0218, cje0219, cje0220, cje0221, cje0222, cje0223, cje0224, cje0225, cje0226, cje0227, and cje0228 genes, complete cds; cje0229 gene, partial cds; cje0230 and cje0231 genes, complete cds; and cje0232 gene, partial cds) position: , mismatch: 8, identity: 0.765

ttcttattttttgtattttttagatttttattaa	CRISPR spacer
tttgtattttttgtattttttgtattttttgttt	Protospacer
**. *****************. ******  *  

143. spacer 1.44|1020832|34|NC_020834|PILER-CR,CRT matches to EF694690 (Campylobacter phage CGC-2007 isolate Cj00-6470 cje0216, cje0217, cje0218, cje0219, cje0220, cje0221, cje0222, cje0223, cje0224, cje0225, cje0226, cje0227, and cje0228 genes, complete cds; cje0229 gene, partial cds; cje0230 and cje0231 genes, complete cds; and cje0232 gene, partial cds) position: , mismatch: 8, identity: 0.765

ttcttattttttgtattttttagatttttattaa	CRISPR spacer
tttacattttttgtattttttgtattttttgtat	Protospacer
**. .****************. ******  ** 

144. spacer 1.44|1020832|34|NC_020834|PILER-CR,CRT matches to CP020756 (Bacillus thuringiensis strain ATCC 10792 plasmid pLDW-17, complete sequence) position: , mismatch: 8, identity: 0.765

ttcttattttttgtattttttagatttttattaa	CRISPR spacer
ttatatttttttatattttttacatttttatatg	Protospacer
** *  ******.********* ********  .

145. spacer 1.44|1020832|34|NC_020834|PILER-CR,CRT matches to NZ_CP013615 (Clostridium perfringens strain JP838 plasmid pJFP838A, complete sequence) position: , mismatch: 8, identity: 0.765

ttcttattttttgtattttttagatttttattaa	CRISPR spacer
ttatatatttttgtattttttacattttgataat	Protospacer
** *   *************** ***** ** * 

146. spacer 1.44|1020832|34|NC_020834|PILER-CR,CRT matches to KX229736 (Campylobacter phage PC5, complete genome) position: , mismatch: 8, identity: 0.765

ttcttattttttgtattttttagatttttattaa	CRISPR spacer
tagtgattttgtgtattttttagatgtttcgaaa	Protospacer
*  * ***** ************** ***   **

147. spacer 1.10|1020699|35|NC_020834|CRISPRCasFinder matches to NZ_LR214939 (Mycoplasma salivarium strain NCTC10113 plasmid 2) position: , mismatch: 9, identity: 0.743

aattaacaaaatggatgaaatatgaaaatcacaaa	CRISPR spacer
gcacaaaaaaatgaatgaaatatgaaaattaataa	Protospacer
.  .** ******.***************.*  **

148. spacer 1.12|1020832|33|NC_020834|CRISPRCasFinder matches to NZ_CP046304 (Staphylococcus hominis strain FDAARGOS_746 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.727

ttcttatt-----ttttgtattttttagatttttatta	CRISPR spacer
-----actaacaattttgtaagttttagatttttattt	Protospacer
     *.*     *******  *************** 

149. spacer 1.12|1020832|33|NC_020834|CRISPRCasFinder matches to MH572392 (Microviridae sp. isolate SD_SF_13, complete genome) position: , mismatch: 9, identity: 0.727

ttcttattttttgtattttttagatttttatta	CRISPR spacer
cgatgattttttgtatttttttggtttttttag	Protospacer
.  * **************** *.***** * .

150. spacer 1.12|1020832|33|NC_020834|CRISPRCasFinder matches to LC425521 (Uncultured phage DNA, contig: NODE562) position: , mismatch: 9, identity: 0.727

ttcttattttttgtattttttagatttttatta	CRISPR spacer
gatattctttttgtgtttttttgatttttatca	Protospacer
  . * .*******.****** *********.*

151. spacer 1.44|1020832|34|NC_020834|PILER-CR,CRT matches to NC_011412 (Clostridium perfringens plasmid pCP8533etx, complete sequence) position: , mismatch: 9, identity: 0.735

ttcttattttttgtattttttagatttttattaa	CRISPR spacer
tatcgactttttttattttttagatttatatttt	Protospacer
* .. *.***** ************** ****  

152. spacer 1.44|1020832|34|NC_020834|PILER-CR,CRT matches to MH616940 (Microviridae sp. isolate ctdg534, complete genome) position: , mismatch: 9, identity: 0.735

ttcttattttttgtattttttagatttttattaa	CRISPR spacer
tctgtattttttgtattttttgtattttttgaat	Protospacer
*.. *****************. ******   * 

153. spacer 1.44|1020832|34|NC_020834|PILER-CR,CRT matches to MT773556 (Myoviridae sp. isolate BML_4 genomic sequence) position: , mismatch: 9, identity: 0.735

ttcttattttttgtattttttagatttttattaa	CRISPR spacer
tttgtattttttgaatattttagattttacaaag	Protospacer
**. ********* ** ***********    *.

154. spacer 1.6|1020431|35|NC_020834|CRISPRCasFinder matches to HM144385 (Brochothrix phage NF5, complete genome) position: , mismatch: 10, identity: 0.714

gtggcacagtaacacgagcagatgctgataaacgc	CRISPR spacer
atcgaccagtaacacgaccagatgttgataattat	Protospacer
.* *  *********** ******.****** ...

155. spacer 1.12|1020832|33|NC_020834|CRISPRCasFinder matches to NZ_CP054001 (Bacteroides fragilis strain FDAARGOS_763 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.697

ttcttattttttgtattttttagatttttatta	CRISPR spacer
aataggttctttgtattctttagatttttaatt	Protospacer
  .  .**.********.************ * 

156. spacer 1.12|1020832|33|NC_020834|CRISPRCasFinder matches to MH107028 (Campylobacter phage CP39, partial genome) position: , mismatch: 10, identity: 0.697

ttcttattttttgtattttttagatttttatta	CRISPR spacer
catagattttgtgtattttttagatgtttcgaa	Protospacer
. .  ***** ************** ***   *

157. spacer 1.21|1021419|34|NC_020834|CRISPRCasFinder matches to NZ_CP035496 (Xylanimonas allomyrinae strain 2JSPR-7 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.706

gtttgcgaagatgacggcatcgagcaagaaacta	CRISPR spacer
gagcgcgaagaggacggcctcgagcaagccgccg	Protospacer
*  .******* ****** *********  .*..

158. spacer 1.44|1020832|34|NC_020834|PILER-CR,CRT matches to NZ_CP046304 (Staphylococcus hominis strain FDAARGOS_746 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.706

ttcttatt-----ttttgtattttttagatttttattaa	CRISPR spacer
-----actaacaattttgtaagttttagatttttatttt	Protospacer
     *.*     *******  ***************  

159. spacer 1.44|1020832|34|NC_020834|PILER-CR,CRT matches to MH572392 (Microviridae sp. isolate SD_SF_13, complete genome) position: , mismatch: 10, identity: 0.706

ttcttattttttgtattttttagatttttattaa	CRISPR spacer
cgatgattttttgtatttttttggtttttttagg	Protospacer
.  * **************** *.***** * ..

160. spacer 1.44|1020832|34|NC_020834|PILER-CR,CRT matches to LC425521 (Uncultured phage DNA, contig: NODE562) position: , mismatch: 10, identity: 0.706

ttcttattttttgtattttttagatttttattaa	CRISPR spacer
gatattctttttgtgtttttttgatttttatcag	Protospacer
  . * .*******.****** *********.*.

161. spacer 1.44|1020832|34|NC_020834|PILER-CR,CRT matches to MH107028 (Campylobacter phage CP39, partial genome) position: , mismatch: 10, identity: 0.706

ttcttattttttgtattttttagatttttattaa	CRISPR spacer
catagattttgtgtattttttagatgtttcgaaa	Protospacer
. .  ***** ************** ***   **

162. spacer 1.21|1021419|34|NC_020834|CRISPRCasFinder matches to NZ_CP017942 (Phyllobacterium zundukense strain Tri-48 plasmid unnamed3, complete sequence) position: , mismatch: 11, identity: 0.676

gtttgcgaagatgacggcatcgagcaagaaacta	CRISPR spacer
gacgtcgaagatgacggcagcgagcaggacgagg	Protospacer
* .  ************** ******.** .  .

163. spacer 1.26|1021754|35|NC_020834|CRISPRCasFinder matches to NC_014534 (Gloeothece verrucosa PCC 7822 plasmid Cy782202, complete sequence) position: , mismatch: 11, identity: 0.686

ttaaatctaaagctaaagctattttattaattaaa	CRISPR spacer
cccgatctaaagctaaaattattttattagattgg	Protospacer
.. .*************..**********. * ..

164. spacer 1.44|1020832|34|NC_020834|PILER-CR,CRT matches to NZ_CP054001 (Bacteroides fragilis strain FDAARGOS_763 plasmid unnamed1, complete sequence) position: , mismatch: 11, identity: 0.676

ttcttattttttgtattttttagatttttattaa	CRISPR spacer
aataggttctttgtattctttagatttttaattt	Protospacer
  .  .**.********.************ *  

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 7320 4 Pseudomonas_phage(50.0%) NA NA
DBSCAN-SWA_2 11290 : 13174 1 uncultured_Mediterranean_phage(100.0%) NA NA
DBSCAN-SWA_3 27202 : 29351 2 Brevibacillus_phage(50.0%) tRNA NA
DBSCAN-SWA_4 35599 : 38197 1 Cafeteria_roenbergensis_virus(100.0%) NA NA
DBSCAN-SWA_5 53590 : 55442 2 Synechococcus_phage(50.0%) NA NA
DBSCAN-SWA_6 59026 : 64691 6 Bacillus_virus(25.0%) tRNA NA
DBSCAN-SWA_7 69981 : 71991 1 Vibrio_phage(100.0%) NA NA
DBSCAN-SWA_8 99198 : 99618 1 Salmonella_phage(100.0%) NA NA
DBSCAN-SWA_9 105051 : 106194 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_10 112573 : 113320 1 Escherichia_phage(100.0%) NA NA
DBSCAN-SWA_11 133741 : 135274 2 Synechococcus_phage(100.0%) NA NA
DBSCAN-SWA_12 144243 : 145677 1 Mycobacterium_phage(100.0%) NA NA
DBSCAN-SWA_13 162065 : 173037 7 uncultured_Caudovirales_phage(50.0%) NA NA
DBSCAN-SWA_14 178343 : 179591 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_15 192401 : 202556 8 Mannheimia_phage(40.0%) protease,transposase NA
DBSCAN-SWA_16 207562 : 208204 1 Klosneuvirus(100.0%) NA NA
DBSCAN-SWA_17 214814 : 218976 4 Tupanvirus(50.0%) tRNA NA
DBSCAN-SWA_18 232533 : 237671 6 Erwinia_phage(33.33%) tRNA NA
DBSCAN-SWA_19 244695 : 245754 1 Tupanvirus(100.0%) NA NA
DBSCAN-SWA_20 258685 : 269044 10 Pandoravirus(20.0%) NA NA
DBSCAN-SWA_21 281243 : 292698 11 Wolbachia_phage(20.0%) tRNA NA
DBSCAN-SWA_22 301191 : 301698 1 Clostridium_phage(100.0%) NA NA
DBSCAN-SWA_23 305381 : 308411 1 Herpes_simplex_virus(100.0%) NA NA
DBSCAN-SWA_24 314511 : 317871 4 Ostreococcus_lucimarinus_virus(50.0%) NA NA
DBSCAN-SWA_25 322045 : 322798 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_26 325846 : 330504 8 Ralstonia_phage(33.33%) NA NA
DBSCAN-SWA_27 338723 : 340931 2 Organic_Lake_phycodnavirus(50.0%) integrase attL 339534:339550|attR 342226:342242
DBSCAN-SWA_28 344343 : 348212 2 Bodo_saltans_virus(50.0%) NA NA
DBSCAN-SWA_29 355143 : 358490 2 Streptococcus_phage(50.0%) NA NA
DBSCAN-SWA_30 367734 : 370412 5 Salicola_phage(33.33%) NA NA
DBSCAN-SWA_31 375485 : 375863 1 Wolbachia_phage(100.0%) NA NA
DBSCAN-SWA_32 381590 : 382340 1 Bodo_saltans_virus(100.0%) NA NA
DBSCAN-SWA_33 385858 : 396595 9 Vibrio_phage(25.0%) tRNA NA
DBSCAN-SWA_34 400261 : 401610 2 Clostridium_phage(50.0%) NA NA
DBSCAN-SWA_35 427614 : 429978 1 Lactococcus_phage(100.0%) NA NA
DBSCAN-SWA_36 439146 : 439419 1 Burkholderia_virus(100.0%) NA NA
DBSCAN-SWA_37 447211 : 448084 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_38 454275 : 467836 15 Bacillus_virus(12.5%) NA NA
DBSCAN-SWA_39 471606 : 473244 1 Only_Syngen_Nebraska_virus(100.0%) NA NA
DBSCAN-SWA_40 488319 : 494789 5 Tupanvirus(33.33%) tRNA NA
DBSCAN-SWA_41 500738 : 502034 1 Moraxella_phage(100.0%) NA NA
DBSCAN-SWA_42 509526 : 516300 7 Bacillus_phage(66.67%) tRNA NA
DBSCAN-SWA_43 519752 : 531321 11 Acinetobacter_phage(16.67%) tRNA NA
DBSCAN-SWA_44 544707 : 545970 1 Aeromonas_phage(100.0%) NA NA
DBSCAN-SWA_45 549322 : 550788 2 Prochlorococcus_phage(50.0%) NA NA
DBSCAN-SWA_46 555712 : 567392 10 Mycoplasma_phage(40.0%) NA NA
DBSCAN-SWA_47 571600 : 572254 1 Anomala_cuprea_entomopoxvirus(100.0%) NA NA
DBSCAN-SWA_48 576438 : 583355 7 Haemophilus_phage(33.33%) transposase NA
DBSCAN-SWA_49 591015 : 593385 1 Iris_mild_mosaic_virus(100.0%) NA NA
DBSCAN-SWA_50 602680 : 603799 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_51 614833 : 616891 1 Serratia_phage(100.0%) NA NA
DBSCAN-SWA_52 624485 : 632113 8 Orpheovirus(25.0%) NA NA
DBSCAN-SWA_53 636429 : 637077 1 Acaryochloris_phage(100.0%) NA NA
DBSCAN-SWA_54 646974 : 648033 1 Proteus_phage(100.0%) NA NA
DBSCAN-SWA_55 654104 : 662600 7 Catovirus(33.33%) NA NA
DBSCAN-SWA_56 674141 : 674969 1 Vibrio_phage(100.0%) NA NA
DBSCAN-SWA_57 679100 : 681294 3 Staphylococcus_phage(50.0%) NA NA
DBSCAN-SWA_58 690910 : 692952 2 uncultured_Mediterranean_phage(50.0%) tRNA NA
DBSCAN-SWA_59 696913 : 700833 3 Bacillus_thuringiensis_phage(33.33%) NA NA
DBSCAN-SWA_60 709014 : 711887 4 uncultured_Caudovirales_phage(25.0%) transposase NA
DBSCAN-SWA_61 729972 : 731738 2 Moumouvirus(50.0%) NA NA
DBSCAN-SWA_62 741486 : 742671 1 Klosneuvirus(100.0%) NA NA
DBSCAN-SWA_63 754696 : 757314 2 Lactococcus_phage(50.0%) NA NA
DBSCAN-SWA_64 760953 : 871947 108 Mannheimia_phage(36.21%) tRNA,portal,integrase,terminase,protease,tail,holin attL 849927:849943|attR 874188:874204
DBSCAN-SWA_65 880098 : 880767 1 Moraxella_phage(100.0%) NA NA
DBSCAN-SWA_66 893830 : 895830 2 uncultured_virus(50.0%) NA NA
DBSCAN-SWA_67 911821 : 913753 1 Tupanvirus(100.0%) NA NA
DBSCAN-SWA_68 923972 : 928459 2 Liberibacter_phage(50.0%) NA NA
DBSCAN-SWA_69 954745 : 955678 1 Mannheimia_phage(100.0%) transposase NA
DBSCAN-SWA_70 960749 : 970861 9 Tupanvirus(20.0%) NA NA
DBSCAN-SWA_71 987858 : 1002737 9 Bacillus_phage(42.86%) NA NA
DBSCAN-SWA_72 1008949 : 1010549 2 Helicobacter_phage(50.0%) transposase NA
DBSCAN-SWA_73 1024101 : 1025604 1 Tupanvirus(100.0%) tRNA NA
DBSCAN-SWA_74 1036832 : 1144202 108 Mannheimia_phage(59.57%) tRNA,portal,head,integrase,terminase,capsid,tail,holin attL 1025438:1025456|attR 1109447:1109465
DBSCAN-SWA_75 1154267 : 1161761 5 Bodo_saltans_virus(33.33%) tRNA NA
DBSCAN-SWA_76 1165378 : 1173565 5 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_77 1178410 : 1179280 1 Tetraselmis_virus(100.0%) NA NA
DBSCAN-SWA_78 1189066 : 1198711 1 Moraxella_phage(100.0%) NA NA
DBSCAN-SWA_79 1206372 : 1212657 4 Colwellia_phage(33.33%) NA NA
DBSCAN-SWA_80 1231067 : 1232762 2 Escherichia_phage(50.0%) NA NA
DBSCAN-SWA_81 1236549 : 1242916 3 Phage_21(50.0%) NA NA
DBSCAN-SWA_82 1253354 : 1258582 4 Mannheimia_phage(50.0%) transposase NA
DBSCAN-SWA_83 1265385 : 1267107 1 Yellowstone_lake_phycodnavirus(100.0%) NA NA
DBSCAN-SWA_84 1273784 : 1277120 3 Citrobacter_phage(33.33%) NA NA
DBSCAN-SWA_85 1281362 : 1286185 3 Edwardsiella_phage(33.33%) NA NA
DBSCAN-SWA_86 1292229 : 1298797 6 Streptococcus_phage(33.33%) protease NA
DBSCAN-SWA_87 1311580 : 1312984 1 Indivirus(100.0%) tRNA NA
DBSCAN-SWA_88 1317725 : 1319396 1 Escherichia_phage(100.0%) tRNA NA
DBSCAN-SWA_89 1322730 : 1391556 64 Escherichia_phage(10.0%) tRNA,transposase,integrase,protease,tail attL 1323514:1323529|attR 1343007:1343022
DBSCAN-SWA_90 1397978 : 1416901 16 Bacillus_phage(28.57%) transposase NA
DBSCAN-SWA_91 1424895 : 1434280 11 Caulobacter_virus(20.0%) transposase NA
DBSCAN-SWA_92 1459195 : 1461247 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_93 1467888 : 1478145 9 Escherichia_phage(20.0%) NA NA
DBSCAN-SWA_94 1488872 : 1498649 12 Bacillus_virus(14.29%) NA NA
DBSCAN-SWA_95 1504134 : 1512474 7 Pandoravirus(20.0%) capsid,integrase,tail attL 1508723:1508742|attR 1512828:1512847
DBSCAN-SWA_96 1539923 : 1544496 4 Staphylococcus_phage(50.0%) NA NA
DBSCAN-SWA_97 1554672 : 1556109 1 Acinetobacter_phage(100.0%) NA NA
DBSCAN-SWA_98 1561218 : 1566570 5 Staphylococcus_phage(66.67%) tRNA NA
DBSCAN-SWA_99 1573933 : 1591504 21 Streptococcus_phage(22.22%) NA NA
DBSCAN-SWA_100 1603437 : 1613960 14 Caulobacter_phage(20.0%) transposase NA
DBSCAN-SWA_101 1622469 : 1626889 5 Streptococcus_phage(50.0%) NA NA
DBSCAN-SWA_102 1631102 : 1642850 16 Mannheimia_phage(33.33%) transposase NA
DBSCAN-SWA_103 1646542 : 1652855 3 Enterobacterial_phage(50.0%) transposase NA
DBSCAN-SWA_104 1663713 : 1666308 5 Wolbachia_phage(66.67%) NA NA
DBSCAN-SWA_105 1670579 : 1673371 2 Planktothrix_phage(50.0%) NA NA
DBSCAN-SWA_106 1683380 : 1684808 1 uncultured_Mediterranean_phage(100.0%) NA NA
DBSCAN-SWA_107 1688091 : 1704445 12 Staphylococcus_phage(16.67%) NA NA
DBSCAN-SWA_108 1717514 : 1720990 5 Elephant_endotheliotropic_herpesvirus(25.0%) NA NA
DBSCAN-SWA_109 1725369 : 1732119 5 Staphylococcus_phage(60.0%) NA NA
DBSCAN-SWA_110 1738040 : 1739111 1 Pseudomonas_phage(100.0%) NA NA
DBSCAN-SWA_111 1748275 : 1764633 12 uncultured_Mediterranean_phage(16.67%) tRNA NA
DBSCAN-SWA_112 1768599 : 1777182 10 Morganella_phage(20.0%) tRNA NA
DBSCAN-SWA_113 1781179 : 1782224 2 uncultured_Caudovirales_phage(100.0%) NA NA
DBSCAN-SWA_114 1793208 : 1799271 6 uncultured_Caudovirales_phage(25.0%) NA NA
DBSCAN-SWA_115 1805603 : 1810275 5 Mannheimia_phage(50.0%) transposase NA
DBSCAN-SWA_116 1817727 : 1822320 4 uncultured_Mediterranean_phage(66.67%) NA NA
DBSCAN-SWA_117 1828881 : 1830033 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_118 1833356 : 1834391 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_119 1837594 : 1845445 5 Pandoravirus(25.0%) tRNA NA
DBSCAN-SWA_120 1852711 : 1859016 4 Escherichia_phage(50.0%) NA NA
DBSCAN-SWA_121 1866521 : 1873580 7 Planktothrix_phage(25.0%) NA NA
DBSCAN-SWA_122 1884753 : 1887288 2 Tupanvirus(50.0%) NA NA
DBSCAN-SWA_123 1894017 : 1894749 1 Salmonella_phage(100.0%) NA NA
DBSCAN-SWA_124 1904756 : 1910158 7 Acinetobacter_phage(40.0%) protease NA
DBSCAN-SWA_125 1913268 : 1914285 1 Tupanvirus(100.0%) NA NA
DBSCAN-SWA_126 1920047 : 1920785 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_127 1923906 : 1947331 17 Tetraselmis_virus(22.22%) NA NA
DBSCAN-SWA_128 1952221 : 1959320 2 Tupanvirus(50.0%) tRNA NA
DBSCAN-SWA_129 1963266 : 1963845 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_130 1967923 : 1970346 2 Bacillus_virus(50.0%) NA NA
DBSCAN-SWA_131 1978434 : 1982779 4 Ostreococcus_lucimarinus_virus(50.0%) NA NA
DBSCAN-SWA_132 1994270 : 1997966 5 Burkholderia_phage(66.67%) tRNA NA
DBSCAN-SWA_133 2012775 : 2015388 1 Acinetobacter_phage(100.0%) NA NA
DBSCAN-SWA_134 2022284 : 2024916 2 Staphylococcus_phage(50.0%) NA NA
DBSCAN-SWA_135 2029675 : 2029918 1 Dickeya_phage(100.0%) NA NA
DBSCAN-SWA_136 2039256 : 2040081 1 Mimivirus(100.0%) NA NA
DBSCAN-SWA_137 2060388 : 2062804 3 Tupanvirus(50.0%) NA NA
DBSCAN-SWA_138 2076115 : 2077696 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_139 2081561 : 2082974 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_140 2086967 : 2095757 7 Klosneuvirus(33.33%) tRNA NA
DBSCAN-SWA_141 2105290 : 2116409 9 Vibrio_phage(25.0%) NA NA
DBSCAN-SWA_142 2119848 : 2125650 7 Lake_Baikal_phage(33.33%) NA NA
DBSCAN-SWA_143 2132531 : 2148069 10 Hokovirus(20.0%) NA NA
DBSCAN-SWA_144 2151757 : 2153515 2 Klosneuvirus(50.0%) NA NA
DBSCAN-SWA_145 2162325 : 2163183 1 Mollivirus(100.0%) NA NA
DBSCAN-SWA_146 2172717 : 2176122 4 Synechococcus_phage(50.0%) transposase NA
DBSCAN-SWA_147 2185185 : 2186175 1 Wolbachia_phage(100.0%) NA NA
DBSCAN-SWA_148 2190993 : 2195647 6 uncultured_Caudovirales_phage(50.0%) transposase NA
DBSCAN-SWA_149 2199677 : 2202143 1 Escherichia_phage(100.0%) NA NA
DBSCAN-SWA_150 2211899 : 2215354 3 Stx_converting_phage(50.0%) NA NA
DBSCAN-SWA_151 2219128 : 2224515 9 Escherichia_phage(33.33%) NA NA
DBSCAN-SWA_152 2237029 : 2239975 1 Klosneuvirus(100.0%) NA NA
DBSCAN-SWA_153 2247887 : 2249078 1 Klosneuvirus(100.0%) NA NA
DBSCAN-SWA_154 2257398 : 2258898 1 Organic_Lake_phycodnavirus(100.0%) NA NA
DBSCAN-SWA_155 2267415 : 2269344 1 Rhodobacter_phage(100.0%) transposase,integrase attL 2256666:2256679|attR 2275711:2275724
DBSCAN-SWA_156 2273117 : 2274158 1 Mannheimia_phage(100.0%) transposase NA
DBSCAN-SWA_157 2279272 : 2280892 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_158 2283960 : 2286741 1 Catovirus(100.0%) NA NA
DBSCAN-SWA_159 2303376 : 2303619 1 Vibrio_phage(100.0%) NA NA
DBSCAN-SWA_160 2316923 : 2318468 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_161 2340493 : 2343138 2 Paramecium_bursaria_Chlorella_virus(50.0%) NA NA
DBSCAN-SWA_162 2346955 : 2351124 3 Bacillus_virus(33.33%) NA NA
DBSCAN-SWA_163 2360337 : 2361249 1 Mycobacterium_phage(100.0%) NA NA
DBSCAN-SWA_164 2368150 : 2369185 1 Salmonella_phage(100.0%) NA NA
DBSCAN-SWA_165 2378251 : 2381961 4 Escherichia_phage(100.0%) NA NA
DBSCAN-SWA_166 2389885 : 2391208 1 Erwinia_phage(100.0%) NA NA
DBSCAN-SWA_167 2396819 : 2398946 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_168 2415085 : 2418556 4 Haemophilus_phage(66.67%) transposase NA
DBSCAN-SWA_169 2426304 : 2428738 3 Tetraselmis_virus(50.0%) NA NA
DBSCAN-SWA_170 2443713 : 2451588 5 Burkholderia_phage(33.33%) NA NA
DBSCAN-SWA_171 2456457 : 2457987 1 Anomala_cuprea_entomopoxvirus(100.0%) NA NA
DBSCAN-SWA_172 2471560 : 2473408 1 Tupanvirus(100.0%) NA NA
DBSCAN-SWA_173 2480011 : 2487507 11 Mannheimia_phage(81.82%) transposase,tail NA
DBSCAN-SWA_174 2490815 : 2491808 1 Heterosigma_akashiwo_virus(100.0%) NA NA
DBSCAN-SWA_175 2499330 : 2500464 1 Halovirus(100.0%) NA NA
DBSCAN-SWA_176 2510447 : 2511953 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_177 2521688 : 2522762 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_178 2532570 : 2533218 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_179 2536475 : 2543763 5 Catovirus(66.67%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage