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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NC_021235 Lactobacillus fermentum F-6, complete sequence 1 crisprs cas14j,cas3,DEDDh,WYL,csa3,DinG,cas1,cas6e,cas5,cas7,cse2gr11,cas8e 0 32 13 0

Results visualization

1. NC_021235
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_021235_1 1348092-1352667 TypeV,TypeI-E NA
74 spacers
cas14j,DEDDh,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NC_021235_1 1.18|1349157|33|NC_021235|CRISPRCasFinder,CRT 1349157-1349189 33 MN830252 Lactobacillus phage JNU_P1, complete genome 27234-27266 0 1.0
NC_021235_1 1.18|1349157|33|NC_021235|CRISPRCasFinder,CRT 1349157-1349189 33 HQ141410 Lactobacillus phage LF1, complete genome 22566-22598 0 1.0
NC_021235_1 1.24|1349523|33|NC_021235|CRISPRCasFinder,CRT 1349523-1349555 33 MN830253 Lactobacillus phage JNU_P5, complete genome 53466-53498 0 1.0
NC_021235_1 1.26|1349646|33|NC_021235|CRISPRCasFinder,CRT 1349646-1349678 33 MN830253 Lactobacillus phage JNU_P5, complete genome 26115-26147 0 1.0
NC_021235_1 1.62|1351875|33|NC_021235|CRISPRCasFinder,PILER-CR 1351875-1351907 33 KP054477 Lactobacillus phage LfeInf, complete genome 68278-68310 0 1.0
NC_021235_1 1.70|1352363|33|NC_021235|CRISPRCasFinder,PILER-CR 1352363-1352395 33 MK504445 Lactobacillus phage ATCCB, complete genome 49730-49762 0 1.0
NC_021235_1 1.15|1348974|33|NC_021235|CRISPRCasFinder,CRT 1348974-1349006 33 MN830253 Lactobacillus phage JNU_P5, complete genome 26403-26435 1 0.97
NC_021235_1 1.18|1349157|33|NC_021235|CRISPRCasFinder,CRT 1349157-1349189 33 GU323708 Lactobacillus phage phiPYB5, complete genome 20676-20708 1 0.97
NC_021235_1 1.19|1349218|33|NC_021235|CRISPRCasFinder,CRT 1349218-1349250 33 MN830253 Lactobacillus phage JNU_P5, complete genome 21250-21282 1 0.97
NC_021235_1 1.53|1351294|33|NC_021235|CRISPRCasFinder,CRT 1351294-1351326 33 NC_029068 Lactobacillus phage LfeSau, complete genome 13504-13536 1 0.97
NC_021235_1 1.59|1351692|33|NC_021235|CRISPRCasFinder,PILER-CR 1351692-1351724 33 MN830253 Lactobacillus phage JNU_P5, complete genome 26403-26435 1 0.97
NC_021235_1 1.68|1352241|33|NC_021235|CRISPRCasFinder,PILER-CR 1352241-1352273 33 NC_029068 Lactobacillus phage LfeSau, complete genome 16935-16967 1 0.97
NC_021235_1 1.16|1349035|33|NC_021235|CRISPRCasFinder,CRT 1349035-1349067 33 MN830252 Lactobacillus phage JNU_P1, complete genome 26136-26168 2 0.939
NC_021235_1 1.42|1350623|33|NC_021235|CRISPRCasFinder,CRT 1350623-1350655 33 GU323708 Lactobacillus phage phiPYB5, complete genome 18449-18481 2 0.939
NC_021235_1 1.48|1350989|33|NC_021235|CRISPRCasFinder,CRT 1350989-1351021 33 KP054477 Lactobacillus phage LfeInf, complete genome 36546-36578 2 0.939
NC_021235_1 1.52|1351233|33|NC_021235|CRISPRCasFinder,CRT 1351233-1351265 33 NC_029068 Lactobacillus phage LfeSau, complete genome 14183-14215 2 0.939
NC_021235_1 1.60|1351753|33|NC_021235|CRISPRCasFinder,PILER-CR 1351753-1351785 33 MN830252 Lactobacillus phage JNU_P1, complete genome 26136-26168 2 0.939
NC_021235_1 1.66|1352119|33|NC_021235|CRISPRCasFinder,PILER-CR 1352119-1352151 33 KP054477 Lactobacillus phage LfeInf, complete genome 29181-29213 2 0.939
NC_021235_1 1.82|1351873|33|NC_021235|CRT 1351873-1351905 33 KP054477 Lactobacillus phage LfeInf, complete genome 68280-68312 2 0.939
NC_021235_1 1.88|1352239|33|NC_021235|CRT 1352239-1352271 33 NC_029068 Lactobacillus phage LfeSau, complete genome 16937-16969 2 0.939
NC_021235_1 1.90|1352361|33|NC_021235|CRT 1352361-1352393 33 MK504445 Lactobacillus phage ATCCB, complete genome 49728-49760 2 0.939
NC_021235_1 1.79|1351690|33|NC_021235|CRT 1351690-1351722 33 MN830253 Lactobacillus phage JNU_P5, complete genome 26405-26437 3 0.909
NC_021235_1 1.27|1349707|33|NC_021235|CRISPRCasFinder,CRT 1349707-1349739 33 MN830253 Lactobacillus phage JNU_P5, complete genome 27237-27269 4 0.879
NC_021235_1 1.80|1351751|33|NC_021235|CRT 1351751-1351783 33 MN830252 Lactobacillus phage JNU_P1, complete genome 26134-26166 4 0.879
NC_021235_1 1.86|1352117|33|NC_021235|CRT 1352117-1352149 33 KP054477 Lactobacillus phage LfeInf, complete genome 29179-29211 4 0.879
NC_021235_1 1.48|1350989|33|NC_021235|CRISPRCasFinder,CRT 1350989-1351021 33 MT774376 CrAssphage cr55_1, complete genome 58297-58329 6 0.818
NC_021235_1 1.48|1350989|33|NC_021235|CRISPRCasFinder,CRT 1350989-1351021 33 MT774380 CrAssphage cr1_1, complete genome 61884-61916 6 0.818
NC_021235_1 1.4|1348303|33|NC_021235|CRISPRCasFinder,CRT 1348303-1348335 33 AP014341 Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S37-C76, *** SEQUENCING IN PROGRESS *** 25950-25982 7 0.788
NC_021235_1 1.36|1350256|33|NC_021235|CRISPRCasFinder,CRT 1350256-1350288 33 MT778837 Rhizobium phage AF3, complete genome 137419-137451 7 0.788
NC_021235_1 1.36|1350256|33|NC_021235|CRISPRCasFinder,CRT 1350256-1350288 33 MN549361 Rhizobium phage RL2RES, complete genome 74441-74473 7 0.788
NC_021235_1 1.36|1350256|33|NC_021235|CRISPRCasFinder,CRT 1350256-1350288 33 NC_025429 Rhizobium phage vB_RleM_P10VF, complete genome 126023-126055 7 0.788
NC_021235_1 1.54|1351355|34|NC_021235|CRISPRCasFinder,CRT 1351355-1351388 34 NZ_CP045273 Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence 1061631-1061664 7 0.794
NC_021235_1 1.63|1351936|33|NC_021235|CRISPRCasFinder,PILER-CR 1351936-1351968 33 NZ_CP039965 Pseudorhodobacter sp. S12M18 plasmid unnamed1, complete sequence 1345267-1345299 7 0.788
NC_021235_1 1.90|1352361|33|NC_021235|CRT 1352361-1352393 33 MK504442 Lactobacillus phage 3-SAC12, complete genome 21034-21066 7 0.788
NC_021235_1 1.32|1350012|33|NC_021235|CRISPRCasFinder,CRT 1350012-1350044 33 NZ_CP031836 Lactobacillus amylolyticus strain L5 plasmid p1, complete sequence 195842-195874 8 0.758
NC_021235_1 1.32|1350012|33|NC_021235|CRISPRCasFinder,CRT 1350012-1350044 33 NZ_CP020458 Lactobacillus amylolyticus strain L6 plasmid pL6-1, complete sequence 209041-209073 8 0.758
NC_021235_1 1.36|1350256|33|NC_021235|CRISPRCasFinder,CRT 1350256-1350288 33 MN734438 Sphingomonas phage Lucius, complete genome 5466-5498 8 0.758
NC_021235_1 1.36|1350256|33|NC_021235|CRISPRCasFinder,CRT 1350256-1350288 33 MT778839 Rhizobium phage P9VFCI, complete genome 46369-46401 8 0.758
NC_021235_1 1.36|1350256|33|NC_021235|CRISPRCasFinder,CRT 1350256-1350288 33 MN549360 Rhizobium phage RL38J1, complete genome 121054-121086 8 0.758
NC_021235_1 1.40|1350501|33|NC_021235|CRISPRCasFinder,CRT 1350501-1350533 33 MN694638 Marine virus AFVG_250M1093, complete genome 38666-38698 8 0.758
NC_021235_1 1.17|1349096|33|NC_021235|CRISPRCasFinder,CRT 1349096-1349128 33 MN694029 Marine virus AFVG_250M395, complete genome 9619-9651 9 0.727
NC_021235_1 1.36|1350256|33|NC_021235|CRISPRCasFinder,CRT 1350256-1350288 33 NZ_CP007015 Pseudomonas syringae CC1557 plasmid pCC1557, complete sequence 228-260 9 0.727
NC_021235_1 1.36|1350256|33|NC_021235|CRISPRCasFinder,CRT 1350256-1350288 33 MN734439 Sphingomonas phage Kharn, complete genome 5465-5497 9 0.727
NC_021235_1 1.40|1350501|33|NC_021235|CRISPRCasFinder,CRT 1350501-1350533 33 NZ_CP017949 Tenericutes bacterium MO-XQ plasmid unnamed, complete sequence 34848-34880 9 0.727
NC_021235_1 1.53|1351294|33|NC_021235|CRISPRCasFinder,CRT 1351294-1351326 33 NZ_CP054616 Azospirillum oryzae strain KACC 14407 plasmid unnamed2, complete sequence 158072-158104 9 0.727
NC_021235_1 1.54|1351355|34|NC_021235|CRISPRCasFinder,CRT 1351355-1351388 34 NZ_CP033927 Chryseobacterium joostei strain DSM 16927 plasmid unnamed, complete sequence 21847-21880 9 0.735
NC_021235_1 1.61|1351814|33|NC_021235|CRISPRCasFinder,PILER-CR 1351814-1351846 33 MN694029 Marine virus AFVG_250M395, complete genome 9619-9651 9 0.727
NC_021235_1 1.83|1351934|33|NC_021235|CRT 1351934-1351966 33 NZ_CP039965 Pseudorhodobacter sp. S12M18 plasmid unnamed1, complete sequence 1345265-1345297 9 0.727
NC_021235_1 1.36|1350256|33|NC_021235|CRISPRCasFinder,CRT 1350256-1350288 33 NZ_CP007015 Pseudomonas syringae CC1557 plasmid pCC1557, complete sequence 42214-42246 10 0.697
NC_021235_1 1.53|1351294|33|NC_021235|CRISPRCasFinder,CRT 1351294-1351326 33 NZ_CP029831 Azospirillum ramasamyi strain M2T2B2 plasmid unnamed7, complete sequence 406216-406248 10 0.697
NC_021235_1 1.53|1351294|33|NC_021235|CRISPRCasFinder,CRT 1351294-1351326 33 NC_013857 Azospirillum sp. B510 plasmid pAB510c, complete sequence 624607-624639 10 0.697
NC_021235_1 1.54|1351355|34|NC_021235|CRISPRCasFinder,CRT 1351355-1351388 34 NZ_CP039845 Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence 214375-214408 11 0.676

1. spacer 1.18|1349157|33|NC_021235|CRISPRCasFinder,CRT matches to MN830252 (Lactobacillus phage JNU_P1, complete genome) position: , mismatch: 0, identity: 1.0

cggccccgcgcttgatcatcttcatcttttgca	CRISPR spacer
cggccccgcgcttgatcatcttcatcttttgca	Protospacer
*********************************

2. spacer 1.18|1349157|33|NC_021235|CRISPRCasFinder,CRT matches to HQ141410 (Lactobacillus phage LF1, complete genome) position: , mismatch: 0, identity: 1.0

cggccccgcgcttgatcatcttcatcttttgca	CRISPR spacer
cggccccgcgcttgatcatcttcatcttttgca	Protospacer
*********************************

3. spacer 1.24|1349523|33|NC_021235|CRISPRCasFinder,CRT matches to MN830253 (Lactobacillus phage JNU_P5, complete genome) position: , mismatch: 0, identity: 1.0

tagcgattgctaatggcttgatgtggttgctag	CRISPR spacer
tagcgattgctaatggcttgatgtggttgctag	Protospacer
*********************************

4. spacer 1.26|1349646|33|NC_021235|CRISPRCasFinder,CRT matches to MN830253 (Lactobacillus phage JNU_P5, complete genome) position: , mismatch: 0, identity: 1.0

gagtgctgttaaagcacccgattgaatcaacca	CRISPR spacer
gagtgctgttaaagcacccgattgaatcaacca	Protospacer
*********************************

5. spacer 1.62|1351875|33|NC_021235|CRISPRCasFinder,PILER-CR matches to KP054477 (Lactobacillus phage LfeInf, complete genome) position: , mismatch: 0, identity: 1.0

atggtgccatcttcaatgttatccccagaaaag	CRISPR spacer
atggtgccatcttcaatgttatccccagaaaag	Protospacer
*********************************

6. spacer 1.70|1352363|33|NC_021235|CRISPRCasFinder,PILER-CR matches to MK504445 (Lactobacillus phage ATCCB, complete genome) position: , mismatch: 0, identity: 1.0

aatccattgtttaaatcagtaacagtaacgtag	CRISPR spacer
aatccattgtttaaatcagtaacagtaacgtag	Protospacer
*********************************

7. spacer 1.15|1348974|33|NC_021235|CRISPRCasFinder,CRT matches to MN830253 (Lactobacillus phage JNU_P5, complete genome) position: , mismatch: 1, identity: 0.97

gcctggcacaaccgttggcgtcagtgggctatg	CRISPR spacer
gcctggcacaaccgttggcgtcagtggactatg	Protospacer
***************************.*****

8. spacer 1.18|1349157|33|NC_021235|CRISPRCasFinder,CRT matches to GU323708 (Lactobacillus phage phiPYB5, complete genome) position: , mismatch: 1, identity: 0.97

cggccccgcgcttgatcatcttcatcttttgca	CRISPR spacer
cggccccgcgcttaatcatcttcatcttttgca	Protospacer
*************.*******************

9. spacer 1.19|1349218|33|NC_021235|CRISPRCasFinder,CRT matches to MN830253 (Lactobacillus phage JNU_P5, complete genome) position: , mismatch: 1, identity: 0.97

agatgtctaccaggatctaggcaatcagcattg	CRISPR spacer
agatgtataccaggatctaggcaatcagcattg	Protospacer
****** **************************

10. spacer 1.53|1351294|33|NC_021235|CRISPRCasFinder,CRT matches to NC_029068 (Lactobacillus phage LfeSau, complete genome) position: , mismatch: 1, identity: 0.97

attcggccgcaagaccggcccgcttcgtatatg	CRISPR spacer
attcggccgcaagaccggcctgcttcgtatatg	Protospacer
********************.************

11. spacer 1.59|1351692|33|NC_021235|CRISPRCasFinder,PILER-CR matches to MN830253 (Lactobacillus phage JNU_P5, complete genome) position: , mismatch: 1, identity: 0.97

gcctggcacaaccgttggcgtcagtgggctatg	CRISPR spacer
gcctggcacaaccgttggcgtcagtggactatg	Protospacer
***************************.*****

12. spacer 1.68|1352241|33|NC_021235|CRISPRCasFinder,PILER-CR matches to NC_029068 (Lactobacillus phage LfeSau, complete genome) position: , mismatch: 1, identity: 0.97

ttgcggtaggcttccacgttattaaccgttgta	CRISPR spacer
ttgcggtaggcttccacgttattaaccgttgtg	Protospacer
********************************.

13. spacer 1.16|1349035|33|NC_021235|CRISPRCasFinder,CRT matches to MN830252 (Lactobacillus phage JNU_P1, complete genome) position: , mismatch: 2, identity: 0.939

tcggtgctaactggttactacacgtccgctcag	CRISPR spacer
tcagtgctaactggctactacacgtccgctcag	Protospacer
**.***********.******************

14. spacer 1.42|1350623|33|NC_021235|CRISPRCasFinder,CRT matches to GU323708 (Lactobacillus phage phiPYB5, complete genome) position: , mismatch: 2, identity: 0.939

cagccatacagccaaggactctaacagagctga	CRISPR spacer
cagccatacagctaaggattctaacagagctga	Protospacer
************.*****.**************

15. spacer 1.48|1350989|33|NC_021235|CRISPRCasFinder,CRT matches to KP054477 (Lactobacillus phage LfeInf, complete genome) position: , mismatch: 2, identity: 0.939

ttaaataagactgttgatgagcttaatagtaag	CRISPR spacer
ttaaacaagactgttgatgaacttaatagtaag	Protospacer
*****.**************.************

16. spacer 1.52|1351233|33|NC_021235|CRISPRCasFinder,CRT matches to NC_029068 (Lactobacillus phage LfeSau, complete genome) position: , mismatch: 2, identity: 0.939

taggtgacaccgtggcaatcattcgccacgata	CRISPR spacer
taggtgataccgtggcaattattcgccacgata	Protospacer
*******.***********.*************

17. spacer 1.60|1351753|33|NC_021235|CRISPRCasFinder,PILER-CR matches to MN830252 (Lactobacillus phage JNU_P1, complete genome) position: , mismatch: 2, identity: 0.939

tcggtgctaactggttactacacgtccgctcag	CRISPR spacer
tcagtgctaactggctactacacgtccgctcag	Protospacer
**.***********.******************

18. spacer 1.66|1352119|33|NC_021235|CRISPRCasFinder,PILER-CR matches to KP054477 (Lactobacillus phage LfeInf, complete genome) position: , mismatch: 2, identity: 0.939

cgcccttttcttcggtgtacatttcataataca	CRISPR spacer
cgcccttttcttcggtgtacatctcgtaataca	Protospacer
**********************.**.*******

19. spacer 1.82|1351873|33|NC_021235|CRT matches to KP054477 (Lactobacillus phage LfeInf, complete genome) position: , mismatch: 2, identity: 0.939

acatggtgccatcttcaatgttatccccagaaa	CRISPR spacer
caatggtgccatcttcaatgttatccccagaaa	Protospacer
  *******************************

20. spacer 1.88|1352239|33|NC_021235|CRT matches to NC_029068 (Lactobacillus phage LfeSau, complete genome) position: , mismatch: 2, identity: 0.939

acttgcggtaggcttccacgttattaaccgttg	CRISPR spacer
ttttgcggtaggcttccacgttattaaccgttg	Protospacer
 .*******************************

21. spacer 1.90|1352361|33|NC_021235|CRT matches to MK504445 (Lactobacillus phage ATCCB, complete genome) position: , mismatch: 2, identity: 0.939

acaatccattgtttaaatcagtaacagtaacgt	CRISPR spacer
ttaatccattgtttaaatcagtaacagtaacgt	Protospacer
 .*******************************

22. spacer 1.79|1351690|33|NC_021235|CRT matches to MN830253 (Lactobacillus phage JNU_P5, complete genome) position: , mismatch: 3, identity: 0.909

acgcctggcacaaccgttggcgtcagtgggcta	CRISPR spacer
ttgcctggcacaaccgttggcgtcagtggacta	Protospacer
 .***************************.***

23. spacer 1.27|1349707|33|NC_021235|CRISPRCasFinder,CRT matches to MN830253 (Lactobacillus phage JNU_P5, complete genome) position: , mismatch: 4, identity: 0.879

taggatcgccaatcccgttgatggcggatagag	CRISPR spacer
ttggatcaccaatcccgttgatagcggatagaa	Protospacer
* *****.**************.*********.

24. spacer 1.80|1351751|33|NC_021235|CRT matches to MN830252 (Lactobacillus phage JNU_P1, complete genome) position: , mismatch: 4, identity: 0.879

actcggtgctaactggttactacacgtccgctc	CRISPR spacer
cttcagtgctaactggctactacacgtccgctc	Protospacer
 .**.***********.****************

25. spacer 1.86|1352117|33|NC_021235|CRT matches to KP054477 (Lactobacillus phage LfeInf, complete genome) position: , mismatch: 4, identity: 0.879

accgcccttttcttcggtgtacatttcataata	CRISPR spacer
tgcgcccttttcttcggtgtacatctcgtaata	Protospacer
  **********************.**.*****

26. spacer 1.48|1350989|33|NC_021235|CRISPRCasFinder,CRT matches to MT774376 (CrAssphage cr55_1, complete genome) position: , mismatch: 6, identity: 0.818

ttaaataagactgttgatgagcttaatagtaag	CRISPR spacer
ataaagaagactattgatgagcttaattctatg	Protospacer
 **** ******.**************  ** *

27. spacer 1.48|1350989|33|NC_021235|CRISPRCasFinder,CRT matches to MT774380 (CrAssphage cr1_1, complete genome) position: , mismatch: 6, identity: 0.818

ttaaataagactgttgatgagcttaatagtaag	CRISPR spacer
ataaagaagactattgatgagcttaattctatg	Protospacer
 **** ******.**************  ** *

28. spacer 1.4|1348303|33|NC_021235|CRISPRCasFinder,CRT matches to AP014341 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S37-C76, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 7, identity: 0.788

aagcaaaataataaaactagaatagaccgccaa	CRISPR spacer
attgaaaatactaaatctagaatagaccgagaa	Protospacer
*   ****** **** *************  **

29. spacer 1.36|1350256|33|NC_021235|CRISPRCasFinder,CRT matches to MT778837 (Rhizobium phage AF3, complete genome) position: , mismatch: 7, identity: 0.788

-agagcgtcgaagaagtcgtccatcgtttcgata	CRISPR spacer
ccgaac-tcgaagaagtcgtacagcgtttcgcca	Protospacer
  **.* ************* ** ******* .*

30. spacer 1.36|1350256|33|NC_021235|CRISPRCasFinder,CRT matches to MN549361 (Rhizobium phage RL2RES, complete genome) position: , mismatch: 7, identity: 0.788

-agagcgtcgaagaagtcgtccatcgtttcgata	CRISPR spacer
ccgaac-tcgaagaagtcgtacagcgtttcgcca	Protospacer
  **.* ************* ** ******* .*

31. spacer 1.36|1350256|33|NC_021235|CRISPRCasFinder,CRT matches to NC_025429 (Rhizobium phage vB_RleM_P10VF, complete genome) position: , mismatch: 7, identity: 0.788

-agagcgtcgaagaagtcgtccatcgtttcgata	CRISPR spacer
ctgaac-tcgaagaagtcgtacagcgtttcgcca	Protospacer
  **.* ************* ** ******* .*

32. spacer 1.54|1351355|34|NC_021235|CRISPRCasFinder,CRT matches to NZ_CP045273 (Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence) position: , mismatch: 7, identity: 0.794

-aacattttcgttagcaatgctattgatcgattta	CRISPR spacer
caata-tttcgtaaacaatgctattgatcgaaaaa	Protospacer
 **.* ****** *.****************   *

33. spacer 1.63|1351936|33|NC_021235|CRISPRCasFinder,PILER-CR matches to NZ_CP039965 (Pseudorhodobacter sp. S12M18 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.788

aggcgaccaagacattgtcaaactcgtcgaacg-	CRISPR spacer
ttgcgaccaagaccttgtcaaactcg-cggctgc	Protospacer
  *********** ************ **. .* 

34. spacer 1.90|1352361|33|NC_021235|CRT matches to MK504442 (Lactobacillus phage 3-SAC12, complete genome) position: , mismatch: 7, identity: 0.788

acaatccattgtttaaatcagtaacagtaacgt	CRISPR spacer
tcaatccattgtttaaatcagtaactttagttg	Protospacer
 ************************  **..  

35. spacer 1.32|1350012|33|NC_021235|CRISPRCasFinder,CRT matches to NZ_CP031836 (Lactobacillus amylolyticus strain L5 plasmid p1, complete sequence) position: , mismatch: 8, identity: 0.758

tgtaactcagtaaatttaatcttttccatgttg	CRISPR spacer
gctgaatcagtgaatttaatctttgccatgatt	Protospacer
  *.* *****.************ ***** * 

36. spacer 1.32|1350012|33|NC_021235|CRISPRCasFinder,CRT matches to NZ_CP020458 (Lactobacillus amylolyticus strain L6 plasmid pL6-1, complete sequence) position: , mismatch: 8, identity: 0.758

tgtaactcagtaaatttaatcttttccatgttg	CRISPR spacer
gctgaatcagtgaatttaatctttgccatgatt	Protospacer
  *.* *****.************ ***** * 

37. spacer 1.36|1350256|33|NC_021235|CRISPRCasFinder,CRT matches to MN734438 (Sphingomonas phage Lucius, complete genome) position: , mismatch: 8, identity: 0.758

agagcgtcgaagaagtcgtccatcgtttcgata	CRISPR spacer
acattctggaagaagtcgtcgttcgtttcgatg	Protospacer
* * . * ************  **********.

38. spacer 1.36|1350256|33|NC_021235|CRISPRCasFinder,CRT matches to MT778839 (Rhizobium phage P9VFCI, complete genome) position: , mismatch: 8, identity: 0.758

-agagcgtcgaagaagtcgtccatcgtttcgata	CRISPR spacer
ccgaac-tcgaagaagtcgtacagcgtttcgccg	Protospacer
  **.* ************* ** ******* ..

39. spacer 1.36|1350256|33|NC_021235|CRISPRCasFinder,CRT matches to MN549360 (Rhizobium phage RL38J1, complete genome) position: , mismatch: 8, identity: 0.758

-agagcgtcgaagaagtcgtccatcgtttcgata	CRISPR spacer
ccgaac-tcgaagaagtcgtacagcgtttcgccg	Protospacer
  **.* ************* ** ******* ..

40. spacer 1.40|1350501|33|NC_021235|CRISPRCasFinder,CRT matches to MN694638 (Marine virus AFVG_250M1093, complete genome) position: , mismatch: 8, identity: 0.758

tggttggtttcagatagttcatcttcaggtata	CRISPR spacer
tattcttcttctgatagttcatcttcaggtatt	Protospacer
*. *.  .*** ******************** 

41. spacer 1.17|1349096|33|NC_021235|CRISPRCasFinder,CRT matches to MN694029 (Marine virus AFVG_250M395, complete genome) position: , mismatch: 9, identity: 0.727

gtaaaatgaaaataaccattaacgccaaccaag	CRISPR spacer
actcgaataaaataaccattaaagacaaccaag	Protospacer
..  .*  ************** * ********

42. spacer 1.36|1350256|33|NC_021235|CRISPRCasFinder,CRT matches to NZ_CP007015 (Pseudomonas syringae CC1557 plasmid pCC1557, complete sequence) position: , mismatch: 9, identity: 0.727

agagcgtcgaagaagtcgtccatcgtttcgata	CRISPR spacer
cgcgcgtcgaggaagtagtccatcgttgccggg	Protospacer
 * *******.***** ********** * . .

43. spacer 1.36|1350256|33|NC_021235|CRISPRCasFinder,CRT matches to MN734439 (Sphingomonas phage Kharn, complete genome) position: , mismatch: 9, identity: 0.727

agagcgtcgaagaagtcgtccatcgtttcgata	CRISPR spacer
acgttctggaagaagtcgtcgttcgtttcgatg	Protospacer
* . . * ************  **********.

44. spacer 1.40|1350501|33|NC_021235|CRISPRCasFinder,CRT matches to NZ_CP017949 (Tenericutes bacterium MO-XQ plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.727

tggttggtttcagatagttcatcttcaggtata	CRISPR spacer
aatatgaattcagataatttatcttcaggtatg	Protospacer
 .  **. ********.**.************.

45. spacer 1.53|1351294|33|NC_021235|CRISPRCasFinder,CRT matches to NZ_CP054616 (Azospirillum oryzae strain KACC 14407 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.727

attcggccgcaagaccggcccgcttcgtatatg	CRISPR spacer
cagcgtccgcaagaccggcccgcttcgcttcaa	Protospacer
   ** *********************. *  .

46. spacer 1.54|1351355|34|NC_021235|CRISPRCasFinder,CRT matches to NZ_CP033927 (Chryseobacterium joostei strain DSM 16927 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

aacattttcgttagcaatgctattgatcgattta	CRISPR spacer
tttattttctatagcaatgctattgatttatatg	Protospacer
  .******  ****************. ** *.

47. spacer 1.61|1351814|33|NC_021235|CRISPRCasFinder,PILER-CR matches to MN694029 (Marine virus AFVG_250M395, complete genome) position: , mismatch: 9, identity: 0.727

gtaaaatgaaaataaccattaacgccaaccaag	CRISPR spacer
actcgaataaaataaccattaaagacaaccaag	Protospacer
..  .*  ************** * ********

48. spacer 1.83|1351934|33|NC_021235|CRT matches to NZ_CP039965 (Pseudorhodobacter sp. S12M18 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.727

acaggcgaccaagacattgtcaaactcgtcgaa	CRISPR spacer
cgttgcgaccaagaccttgtcaaactcgcggct	Protospacer
    *********** ************. *  

49. spacer 1.36|1350256|33|NC_021235|CRISPRCasFinder,CRT matches to NZ_CP007015 (Pseudomonas syringae CC1557 plasmid pCC1557, complete sequence) position: , mismatch: 10, identity: 0.697

agagcgtcgaagaagtcgtccatcgtttcgata	CRISPR spacer
ctcgcgtcgaggaagtagtccatcgttgccggg	Protospacer
   *******.***** ********** * . .

50. spacer 1.53|1351294|33|NC_021235|CRISPRCasFinder,CRT matches to NZ_CP029831 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed7, complete sequence) position: , mismatch: 10, identity: 0.697

attcggccgcaagaccggcccgcttcgtatatg	CRISPR spacer
cagcgtccgcaagaccggcccgctgcgcttcaa	Protospacer
   ** ****************** **. *  .

51. spacer 1.53|1351294|33|NC_021235|CRISPRCasFinder,CRT matches to NC_013857 (Azospirillum sp. B510 plasmid pAB510c, complete sequence) position: , mismatch: 10, identity: 0.697

attcggccgcaagaccggcccgcttcgtatatg	CRISPR spacer
cagcgtccgcaagaccggcccgctgcgcttcaa	Protospacer
   ** ****************** **. *  .

52. spacer 1.54|1351355|34|NC_021235|CRISPRCasFinder,CRT matches to NZ_CP039845 (Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence) position: , mismatch: 11, identity: 0.676

aacattttcgttagcaatgctattgatcgattta	CRISPR spacer
gacattttcgatagcaatgcaattggctgcacct	Protospacer
.********* ********* ****...*  .. 

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 205014 : 281068 62 Tupanvirus(15.38%) tRNA,transposase,protease NA
DBSCAN-SWA_2 338120 : 346592 10 Enterococcus_phage(33.33%) NA NA
DBSCAN-SWA_3 393703 : 453543 41 Streptococcus_phage(38.46%) holin,integrase,transposase,protease attL 392299:392314|attR 441693:441708
DBSCAN-SWA_4 467688 : 505915 38 Streptococcus_phage(26.67%) tRNA,transposase,protease NA
DBSCAN-SWA_5 660810 : 773716 112 Streptococcus_phage(14.29%) tRNA,transposase,protease NA
DBSCAN-SWA_6 778992 : 898719 103 Streptococcus_phage(27.59%) tRNA,transposase,protease NA
DBSCAN-SWA_7 921824 : 989620 66 Tupanvirus(10.53%) tRNA,transposase,integrase attL 965330:965345|attR 981928:981943
DBSCAN-SWA_8 996416 : 1059768 55 Lactobacillus_phage(23.08%) capsid,integrase,transposase attL 990854:990868|attR 999435:999449
DBSCAN-SWA_9 1265633 : 1270290 7 Lactobacillus_phage(57.14%) integrase,transposase attL 1268408:1268421|attR 1270332:1270345
DBSCAN-SWA_10 1487187 : 1615425 114 Streptococcus_phage(18.75%) tRNA,transposase,protease NA
DBSCAN-SWA_11 1686291 : 1726583 41 Bacillus_phage(20.0%) transposase,protease NA
DBSCAN-SWA_12 1793541 : 1863045 52 Streptococcus_phage(18.75%) transposase NA
DBSCAN-SWA_13 1928501 : 2061623 118 Bacillus_phage(16.13%) tRNA,transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage