Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NC_021252 Amycolatopsis keratiniphila, complete sequence 6 crisprs RT,csa3,WYL,cas4,DEDDh,DinG,casR,cas3 1 4 1 0
NC_023497 Amycolatopsis keratiniphila plasmid pXL100, complete sequence 0 crisprs NA 0 0 0 0

Results visualization

1. NC_021252
Click the left colored region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_021252_1 48862-49263 Orphan NA
9 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_021252_2 483438-483542 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_021252_3 1238420-1238500 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_021252_4 3015840-3015938 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_021252_5 4509171-4509263 Orphan NA
1 spacers
csa3

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_021252_6 5398768-5398854 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NC_021252_1 1.9|49228|18|NC_021252|CRT 49228-49245 18 NC_021252.1 1147175-1147192 1 0.944
NC_021252_1 1.9|49228|18|NC_021252|CRT 49228-49245 18 NC_021252.1 2115333-2115350 1 0.944
NC_021252_1 1.9|49228|18|NC_021252|CRT 49228-49245 18 NC_021252.1 8715769-8715786 1 0.944

1. spacer 1.9|49228|18|NC_021252|CRT matches to position: 1147175-1147192, mismatch: 1, identity: 0.944

gccgccctgctgctggcc	CRISPR spacer
gcggccctgctgctggcc	Protospacer
** ***************

2. spacer 1.9|49228|18|NC_021252|CRT matches to position: 2115333-2115350, mismatch: 1, identity: 0.944

gccgccctgctgctggcc	CRISPR spacer
gccgccgtgctgctggcc	Protospacer
****** ***********

3. spacer 1.9|49228|18|NC_021252|CRT matches to position: 8715769-8715786, mismatch: 1, identity: 0.944

gccgccctgctgctggcc	CRISPR spacer
gccgccctgctgctgacc	Protospacer
***************.**

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NC_021252_1 1.5|49045|21|NC_021252|CRT 49045-49065 21 NC_013856 Azospirillum sp. B510 plasmid pAB510b, complete sequence 553248-553268 1 0.952
NC_021252_1 1.5|49045|21|NC_021252|CRT 49045-49065 21 NZ_CP006368 Aureimonas sp. AU20 plasmid pAU20a, complete sequence 392648-392668 1 0.952
NC_021252_1 1.5|49045|21|NC_021252|CRT 49045-49065 21 NC_016585 Azospirillum lipoferum 4B plasmid AZO_p1, complete sequence 286533-286553 1 0.952
NC_021252_1 1.6|49084|21|NC_021252|CRT 49084-49104 21 NZ_CP046333 Cupriavidus metallidurans strain FDAARGOS_675 plasmid unnamed3 595621-595641 1 0.952
NC_021252_1 1.6|49084|21|NC_021252|CRT 49084-49104 21 NC_007974 Cupriavidus metallidurans CH34 megaplasmid, complete sequence 451610-451630 1 0.952
NC_021252_1 1.6|49084|21|NC_021252|CRT 49084-49104 21 JQ809663 Stenotrophomonas phage Smp131, complete genome 12739-12759 1 0.952
NC_021252_1 1.6|49084|21|NC_021252|CRT 49084-49104 21 NC_014310 Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence 930007-930027 1 0.952
NC_021252_1 1.6|49084|21|NC_021252|CRT 49084-49104 21 NZ_CP022760 Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence 831759-831779 1 0.952
NC_021252_1 1.6|49084|21|NC_021252|CRT 49084-49104 21 NZ_CP022789 Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence 831749-831769 1 0.952
NC_021252_1 1.8|49189|21|NC_021252|CRT 49189-49209 21 NC_013856 Azospirillum sp. B510 plasmid pAB510b, complete sequence 553248-553268 1 0.952
NC_021252_1 1.8|49189|21|NC_021252|CRT 49189-49209 21 NZ_CP006368 Aureimonas sp. AU20 plasmid pAU20a, complete sequence 392648-392668 1 0.952
NC_021252_1 1.8|49189|21|NC_021252|CRT 49189-49209 21 NC_016585 Azospirillum lipoferum 4B plasmid AZO_p1, complete sequence 286533-286553 1 0.952
NC_021252_1 1.6|49084|21|NC_021252|CRT 49084-49104 21 NZ_CP046575 Rhodococcus sp. WAY2 plasmid pRWAY03, complete sequence 48870-48890 2 0.905
NC_021252_1 1.6|49084|21|NC_021252|CRT 49084-49104 21 CP003957 Rhodococcus opacus PD630 plasmid 8, complete sequence 5275-5295 2 0.905
NC_021252_2 2.1|483474|33|NC_021252|CRISPRCasFinder 483474-483506 33 MG948468 Pantoea phage vB_PagS_Vid5, complete genome 4034-4066 10 0.697
NC_021252_2 2.1|483474|33|NC_021252|CRISPRCasFinder 483474-483506 33 NZ_CP028870 Borreliella garinii strain 20047 plasmid lp28-3, complete sequence 23678-23710 11 0.667

1. spacer 1.5|49045|21|NC_021252|CRT matches to NC_013856 (Azospirillum sp. B510 plasmid pAB510b, complete sequence) position: , mismatch: 1, identity: 0.952

gccgggctgctgtgcgccgcc	CRISPR spacer
gccgggctgctgtgggccgcc	Protospacer
************** ******

2. spacer 1.5|49045|21|NC_021252|CRT matches to NZ_CP006368 (Aureimonas sp. AU20 plasmid pAU20a, complete sequence) position: , mismatch: 1, identity: 0.952

gccgggctgctgtgcgccgcc	CRISPR spacer
gccgggctgctgttcgccgcc	Protospacer
************* *******

3. spacer 1.5|49045|21|NC_021252|CRT matches to NC_016585 (Azospirillum lipoferum 4B plasmid AZO_p1, complete sequence) position: , mismatch: 1, identity: 0.952

gccgggctgctgtgcgccgcc	CRISPR spacer
gccgggctgctctgcgccgcc	Protospacer
*********** *********

4. spacer 1.6|49084|21|NC_021252|CRT matches to NZ_CP046333 (Cupriavidus metallidurans strain FDAARGOS_675 plasmid unnamed3) position: , mismatch: 1, identity: 0.952

gccgccaccctgttgctggcc	CRISPR spacer
gccgccaccctgttgctggcg	Protospacer
******************** 

5. spacer 1.6|49084|21|NC_021252|CRT matches to NC_007974 (Cupriavidus metallidurans CH34 megaplasmid, complete sequence) position: , mismatch: 1, identity: 0.952

gccgccaccctgttgctggcc	CRISPR spacer
gccgccaccctgttgctggcg	Protospacer
******************** 

6. spacer 1.6|49084|21|NC_021252|CRT matches to JQ809663 (Stenotrophomonas phage Smp131, complete genome) position: , mismatch: 1, identity: 0.952

gccgccaccctgttgctggcc	CRISPR spacer
gccgccaccctgctgctggcc	Protospacer
************.********

7. spacer 1.6|49084|21|NC_021252|CRT matches to NC_014310 (Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence) position: , mismatch: 1, identity: 0.952

gccgccaccctgttgctggcc	CRISPR spacer
gccgccgccctgttgctggcc	Protospacer
******.**************

8. spacer 1.6|49084|21|NC_021252|CRT matches to NZ_CP022760 (Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.952

gccgccaccctgttgctggcc	CRISPR spacer
gccgccgccctgttgctggcc	Protospacer
******.**************

9. spacer 1.6|49084|21|NC_021252|CRT matches to NZ_CP022789 (Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.952

gccgccaccctgttgctggcc	CRISPR spacer
gccgccgccctgttgctggcc	Protospacer
******.**************

10. spacer 1.8|49189|21|NC_021252|CRT matches to NC_013856 (Azospirillum sp. B510 plasmid pAB510b, complete sequence) position: , mismatch: 1, identity: 0.952

gccgggctgctgtgcgccgcc	CRISPR spacer
gccgggctgctgtgggccgcc	Protospacer
************** ******

11. spacer 1.8|49189|21|NC_021252|CRT matches to NZ_CP006368 (Aureimonas sp. AU20 plasmid pAU20a, complete sequence) position: , mismatch: 1, identity: 0.952

gccgggctgctgtgcgccgcc	CRISPR spacer
gccgggctgctgttcgccgcc	Protospacer
************* *******

12. spacer 1.8|49189|21|NC_021252|CRT matches to NC_016585 (Azospirillum lipoferum 4B plasmid AZO_p1, complete sequence) position: , mismatch: 1, identity: 0.952

gccgggctgctgtgcgccgcc	CRISPR spacer
gccgggctgctctgcgccgcc	Protospacer
*********** *********

13. spacer 1.6|49084|21|NC_021252|CRT matches to NZ_CP046575 (Rhodococcus sp. WAY2 plasmid pRWAY03, complete sequence) position: , mismatch: 2, identity: 0.905

gccgccaccctgttgctggcc	CRISPR spacer
accgccaccctgttgctggcg	Protospacer
.******************* 

14. spacer 1.6|49084|21|NC_021252|CRT matches to CP003957 (Rhodococcus opacus PD630 plasmid 8, complete sequence) position: , mismatch: 2, identity: 0.905

gccgccaccctgttgctggcc	CRISPR spacer
accgccaccctgttgctggcg	Protospacer
.******************* 

15. spacer 2.1|483474|33|NC_021252|CRISPRCasFinder matches to MG948468 (Pantoea phage vB_PagS_Vid5, complete genome) position: , mismatch: 10, identity: 0.697

agcggttaccagcagcgtccgccgcagcagtcg	CRISPR spacer
aatcgttaccagcaccgttcgccgcagcttcaa	Protospacer
*.. ********** ***.*********  . .

16. spacer 2.1|483474|33|NC_021252|CRISPRCasFinder matches to NZ_CP028870 (Borreliella garinii strain 20047 plasmid lp28-3, complete sequence) position: , mismatch: 11, identity: 0.667

agcggttaccagcagcgtccgccgcagcagtcg	CRISPR spacer
ccgccttcccagcagcatccgccgcagcacctt	Protospacer
     ** ********.************ .. 

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 3511652 : 3536360 22 Bacillus_phage(33.33%) protease,tail,plate NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage