CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Prophage number
NZ_CP011979	Klebsiella pneumoniae DMC1097 plasmid pDMC1097-20.222kb, complete sequence	0 crisprs	NA	0
NZ_CP011978	Klebsiella pneumoniae DMC1097 plasmid pDMC1097-77.775kb, complete sequence	0 crisprs	NA	0
NZ_CP011977	Klebsiella pneumoniae DMC1097 plasmid pDMC1097-218.836kb, complete sequence	0 crisprs	cas3,csa3,RT	2
NZ_CP011976	Klebsiella pneumoniae DMC1097 chromosome, complete genome	1 crisprs	csa3,cas3,RT,DEDDh,DinG,WYL	13

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

9754 : 64834

Escherichia_phage(48.0%)

transposase,integrase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001138064.1\|9754_12721_-\|transposase	Tn3-like element TnAs3 family transposase	A0A1B0V7H9	Salmonella_phage	0.0e+00	73.6
WP_000147567.1\|12723_13284_-	recombinase family protein	A0A1B0V7I5	Salmonella_phage	4.0e-49	86.2
WP_000454193.1\|13409_13760_-	DUF3330 domain-containing protein	NA	NA	NA	NA
WP_000845039.1\|13962_14976_-\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	1.0e-71	45.5
WP_001083725.1\|15120_15618_+	trimethoprim-resistant dihydrofolate reductase DfrA12	A0A0A0PL85	Bacillus_phage	7.5e-23	40.9
WP_001336345.1\|15729_16020_+	DUF1010 domain-containing protein	NA	NA	NA	NA
WP_001206356.1\|16025_16817_+	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA2	NA	NA	NA	NA
WP_000679427.1\|16980_17328_+	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA
WP_000259031.1\|17321_18161_+	sulfonamide-resistant dihydropteroate synthase Sul1	A0A0B5J4J5	Pandoravirus	5.0e-11	27.2
WP_000376616.1\|18288_18492_+	hypothetical protein	NA	NA	NA	NA
WP_000184001.1\|18647_19853_+	chromate efflux transporter	NA	NA	NA	NA
WP_000130000.1\|19863_20169_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_001389365.1\|20395_21160_+\|transposase	IS6-like element IS6100 family transposase	A0A077SL39	Escherichia_phage	4.3e-86	65.7
WP_001137892.1\|21652_22237_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_000004159.1\|22236_23475_-	MFS transporter	NA	NA	NA	NA
WP_000219391.1\|23471_24377_-	Mph(A) family macrolide 2'-phosphotransferase	NA	NA	NA	NA
WP_001067855.1\|24498_25203_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_000018329.1\|25353_26169_+	aminoglycoside O-phosphotransferase APH(3')-Ia	A0A193DTG4	Autographa_californica_nuclear_polyhedrosis_virus	6.1e-163	100.0
WP_001067855.1\|26358_27063_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_044117068.1\|28366_29035_+\|transposase	IS6 family transposase	A0A077SL39	Escherichia_phage	1.9e-130	99.5
WP_000948429.1\|30589_31789_-\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_000957857.1\|31798_31987_-	hypothetical protein	NA	NA	NA	NA
WP_001067855.1\|32642_33347_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_002904004.1\|33483_34344_+	class A extended-spectrum beta-lactamase SHV-12	A0A077SL40	Escherichia_phage	2.2e-155	99.3
WP_002903955.1\|35387_36290_+	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	2.6e-159	99.7
WP_000957857.1\|36659_36848_+	hypothetical protein	NA	NA	NA	NA
WP_000948429.1\|36857_38057_+\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_000776034.1\|39155_39587_+	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	1.6e-29	53.3
WP_001754953.1\|39586_40858_+	Y-family DNA polymerase	F1C5A5	Cronobacter_phage	5.4e-150	63.7
WP_000064119.1\|40939_41914_-	ParB/RepB/Spo0J family partition protein	Q38420	Escherichia_phage	5.0e-87	54.1
WP_000368714.1\|41913_43119_-	AAA family ATPase	A0A077SL49	Escherichia_phage	2.4e-163	69.6
WP_000339857.1\|43533_43803_+	hypothetical protein	NA	NA	NA	NA
WP_004118283.1\|43979_44846_-	replication initiation protein	A0A222YYK1	Escherichia_phage	1.5e-23	31.1
WP_032409716.1\|45375_45480_+	hypothetical protein	NA	NA	NA	NA
WP_000764642.1\|45608_45866_+	hypothetical protein	NA	NA	NA	NA
WP_000015958.1\|45923_46700_-\|integrase	phage integrase family protein	I3WFA4	Macacine_betaherpesvirus	6.4e-53	92.9
WP_000129823.1\|46696_47440_-	hypothetical protein	NA	NA	NA	NA
WP_000493378.1\|47490_47841_-	hypothetical protein	NA	NA	NA	NA
WP_001261276.1\|48414_48645_+	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA
WP_000754566.1\|48641_49058_+	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA
WP_001143775.1\|50794_53800_-\|transposase	Tn3-like element Tn3 family transposase	Q1MVP5	Enterobacteria_phage	0.0e+00	99.3
WP_001235713.1\|53961_54519_+	recombinase family protein	Q1MVP4	Enterobacteria_phage	7.0e-94	100.0
WP_001067855.1\|55214_55919_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_004153729.1\|56774_57602_+	phosphonate ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.6e-20	37.6
WP_004152695.1\|57598_58462_+	phosphate/phosphite/phosphonate ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_004152694.1\|58470_59298_+	phosphonate ABC transporter, permease protein PhnE	NA	NA	NA	NA
WP_004152693.1\|59306_60317_+	phosphonate dehydrogenase PtxD	A0A1V0SBV6	Catovirus	1.4e-15	25.1
WP_004152692.1\|60310_61180_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_000019473.1\|62388_63369_-\|transposase	IS5-like element ISKpn26 family transposase	Q38213	Escherichia_phage	8.9e-185	99.1
WP_004118209.1\|64570_64834_-\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_2

70321 : 94837

Escherichia_phage(50.0%)

protease,transposase,integrase

attL 67168:67183|attR 92653:92668

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
67168:67183	attL	NA	NA	NA	NA
WP_004152113.1\|70321_71284_+\|protease	M48 family metalloprotease	NA	NA	NA	NA
WP_020314316.1\|73126_74473_-\|transposase	ISNCY family transposase	NA	NA	NA	NA
WP_003026803.1\|74684_75167_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_003026799.1\|75154_75421_-	DUF1778 domain-containing protein	NA	NA	NA	NA
WP_004152108.1\|75596_75851_-	hypothetical protein	NA	NA	NA	NA
WP_004152107.1\|75926_76184_-	hypothetical protein	NA	NA	NA	NA
WP_004152106.1\|76232_76436_-	hemolysin expression modulator Hha	NA	NA	NA	NA
WP_004152105.1\|76469_76838_-	hypothetical protein	NA	NA	NA	NA
WP_004152104.1\|76881_77376_-	DNA-binding protein	NA	NA	NA	NA
WP_004152103.1\|77406_77982_-	hypothetical protein	NA	NA	NA	NA
WP_004152102.1\|77969_78239_-	hypothetical protein	NA	NA	NA	NA
WP_020315560.1\|78675_79365_+	RES family NAD+ phosphorylase	NA	NA	NA	NA
WP_004193995.1\|79396_80086_-	hypothetical protein	NA	NA	NA	NA
WP_001568025.1\|80638_80857_+	type II toxin-antitoxin system antitoxin CcdA	NA	NA	NA	NA
WP_001568026.1\|80858_81164_+	type II toxin-antitoxin system toxin CcdB	NA	NA	NA	NA
WP_017899885.1\|81332_81728_+	hypothetical protein	NA	NA	NA	NA
WP_022644730.1\|81754_82078_+	hypothetical protein	NA	NA	NA	NA
WP_020315256.1\|82074_83091_+	hypothetical protein	NA	NA	NA	NA
WP_004197635.1\|83288_84083_+\|integrase	phage integrase family protein	I3WFA4	Macacine_betaherpesvirus	5.5e-52	88.7
WP_006788217.1\|84498_84678_-	hypothetical protein	NA	NA	NA	NA
WP_004197649.1\|84797_85424_-	ParA family plasmid-partitioning AAA ATPase	A0A222YXS3	Escherichia_phage	2.9e-40	43.6
WP_022644731.1\|86056_86932_-	RepB family plasmid replication initiator protein	Q71TL8	Escherichia_phage	1.9e-82	57.1
WP_000948429.1\|88011_89211_-\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_000957857.1\|89220_89409_-	hypothetical protein	NA	NA	NA	NA
WP_000215515.1\|89678_90035_-	cupin domain-containing protein	NA	NA	NA	NA
WP_001293886.1\|90024_90426_-	DUF86 domain-containing protein	NA	NA	NA	NA
WP_001247892.1\|90422_90713_-	nucleotidyltransferase	NA	NA	NA	NA
WP_015065644.1\|90787_93754_+\|transposase	Tn3-like element ISPa38 family transposase	A0A1B0V7H9	Salmonella_phage	0.0e+00	73.2
92653:92668	attR	NA	NA	NA	NA
WP_000427623.1\|93832_94837_+\|transposase	IS110-like element IS4321 family transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP011976

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP011976_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011976_1

4546809-4546903

Orphan

Consensus_repeat	Method
ACTATGGTTTTTATGGTTTTTATT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP011976_1

>merge|NZ_CP011976|1|4546809-4546903|CRISPRCasFinder
TTAATGGTCACTATGGTTTTTATGGTTTTTATTCGCTGAACTGCCCGGGAGTGATATATCTCTGATTTATGACTGTGGTTTTTATGGTTTTTATT

>NZ_CP011976|1|1|4546809-4546903|CRISPRCasFinder
TTAATGGTCACTATGGTTTTTATG	GTTTTTATTCGCTGAACTGCCCGGGAGTGATATATCTCTGATTTATG
ACTGTGGTTTTTATGGTTTTTATT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011976.1\|WP_020317459.1\|4534207_4535917_+\|ribulokinase	unknown	unknown	gnl\|CDD\|235221
NZ_CP011976.1\|WP_002888329.1\|4552864_4554151_+\|peptidylprolyl-isomerase-SurA	unknown	unknown	gnl\|CDD\|236758
NZ_CP011976.1\|WP_002888353.1\|4537567_4538263_+\|L-ribulose-5-phosphate-4-epimerase	unknown	unknown	gnl\|CDD\|236181
NZ_CP011976.1\|WP_002888357.1\|4535927_4537430_+\|L-arabinose-isomerase	unknown	unknown	gnl\|CDD\|179503
NZ_CP011976.1\|WP_002888323.1\|4555966_4556344_+\|Co2+/Mg2+-efflux-protein-ApaG	unknown	unknown	gnl\|CDD\|180098
NZ_CP011976.1\|WP_002888320.1\|4557452_4557932_-\|type-3-dihydrofolate-reductase	unknown	unknown	gnl\|CDD\|182714
NZ_CP011976.1\|WP_002888373.1\|4532128_4532896_-\|DedA-family-protein	unknown	unknown	gnl\|CDD\|223659
NZ_CP011976.1\|WP_002888370.1\|4533024_4533870_-\|arabinose-operon-transcriptional-regulator-AraC	unknown	unknown	gnl\|CDD\|236717
NZ_CP011976.1\|WP_002888324.1\|4555142_4555964_+\|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	unknown	unknown	gnl\|CDD\|234708
NZ_CP011976.1\|WP_002888345.1\|4545355_4546720_-\|2-hydroxycarboxylate-transporter-family-protein	unknown	unknown	gnl\|CDD\|377030
NZ_CP011976.1\|WP_002888337.1\|4548659_4549358_+\|response-regulator	unknown	unknown	gnl\|CDD\|226931
NZ_CP011976.1\|WP_004151368.1\|4540983_4543890_+\|RNA-polymerase-associated-protein-RapA	unknown	unknown	gnl\|CDD\|235319
NZ_CP011976.1\|WP_002888327.1\|4554156_4555146_+\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	unknown	unknown	gnl\|CDD\|234696
NZ_CP011976.1\|WP_002888348.1\|4543902_4544562_+\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	unknown	unknown	gnl\|CDD\|236659
NZ_CP011976.1\|WP_002888349.1\|4538438_4540796_+\|DNA-polymerase-II	unknown	unknown	gnl\|CDD\|235595
NZ_CP011976.1\|WP_004147026.1\|4550461_4552810_+\|LPS-assembly-protein-LptD	unknown	unknown	gnl\|CDD\|235158
NZ_CP011976.1\|WP_002888347.1\|4544636_4545176_-\|citrate-lyase-holo-[acyl-carrier-protein]-synthase	unknown	unknown	gnl\|CDD\|163145
NZ_CP011976.1\|WP_002888321.1\|4556348_4557197_+\|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)-ApaH	unknown	unknown	gnl\|CDD\|273208
NZ_CP011976.1\|WP_002888340.1\|4547044_4548670_+\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|225827
NZ_CP011976.1\|WP_002888332.1\|4549390_4550218_-\|co-chaperone-DjlA	unknown	unknown	gnl\|CDD\|236512

Protein	Function_ID	Function_description	E-value
NZ_CP011976.1\|WP_020317459.1\|4534207_4535917_+\|ribulokinase	gnl\|CDD\|235221	PRK04123, PRK04123, ribulokinase; Provisional.	0
NZ_CP011976.1\|WP_002888329.1\|4552864_4554151_+\|peptidylprolyl-isomerase-SurA	gnl\|CDD\|236758	PRK10770, PRK10770, peptidyl-prolyl cis-trans isomerase SurA; Provisional.	0
NZ_CP011976.1\|WP_002888353.1\|4537567_4538263_+\|L-ribulose-5-phosphate-4-epimerase	gnl\|CDD\|236181	PRK08193, araD, L-ribulose-5-phosphate 4-epimerase AraD.	0
NZ_CP011976.1\|WP_002888357.1\|4535927_4537430_+\|L-arabinose-isomerase	gnl\|CDD\|179503	PRK02929, PRK02929, L-arabinose isomerase; Provisional.	0
NZ_CP011976.1\|WP_002888323.1\|4555966_4556344_+\|Co2+/Mg2+-efflux-protein-ApaG	gnl\|CDD\|180098	PRK05461, apaG, CO2+/MG2+ efflux protein ApaG; Reviewed.	7.84855e-74
NZ_CP011976.1\|WP_002888320.1\|4557452_4557932_-\|type-3-dihydrofolate-reductase	gnl\|CDD\|182714	PRK10769, folA, type 3 dihydrofolate reductase.	1.71656e-127
NZ_CP011976.1\|WP_002888373.1\|4532128_4532896_-\|DedA-family-protein	gnl\|CDD\|223659	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown].	1.35562e-48
NZ_CP011976.1\|WP_002888370.1\|4533024_4533870_-\|arabinose-operon-transcriptional-regulator-AraC	gnl\|CDD\|236717	PRK10572, PRK10572, arabinose operon transcriptional regulator AraC.	0
NZ_CP011976.1\|WP_002888324.1\|4555142_4555964_+\|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	gnl\|CDD\|234708	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA.	3.65731e-147
NZ_CP011976.1\|WP_002888345.1\|4545355_4546720_-\|2-hydroxycarboxylate-transporter-family-protein	gnl\|CDD\|377030	pfam03390, 2HCT, 2-hydroxycarboxylate transporter family. The 2-hydroxycarboxylate transporter family is a family of secondary transporters found exclusively in the bacterial kingdom. They function in the metabolism of the di- and tricarboxylates malate and citrate, mostly in fermentative pathways involving decarboxylation of malate or oxaloacetate.	4.87969e-169
NZ_CP011976.1\|WP_002888337.1\|4548659_4549358_+\|response-regulator	gnl\|CDD\|226931	COG4565, CitB, Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms].	5.03078e-66
NZ_CP011976.1\|WP_004151368.1\|4540983_4543890_+\|RNA-polymerase-associated-protein-RapA	gnl\|CDD\|235319	PRK04914, PRK04914, RNA polymerase-associated protein RapA.	0
NZ_CP011976.1\|WP_002888327.1\|4554156_4555146_+\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	gnl\|CDD\|234696	PRK00232, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed.	0
NZ_CP011976.1\|WP_002888348.1\|4543902_4544562_+\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	gnl\|CDD\|236659	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA.	2.4454e-161
NZ_CP011976.1\|WP_002888349.1\|4538438_4540796_+\|DNA-polymerase-II	gnl\|CDD\|235595	PRK05762, PRK05762, DNA polymerase II; Reviewed.	0
NZ_CP011976.1\|WP_004147026.1\|4550461_4552810_+\|LPS-assembly-protein-LptD	gnl\|CDD\|235158	PRK03761, PRK03761, LPS assembly outer membrane complex protein LptD; Provisional.	0
NZ_CP011976.1\|WP_002888347.1\|4544636_4545176_-\|citrate-lyase-holo-[acyl-carrier-protein]-synthase	gnl\|CDD\|163145	TIGR03124, citrate_citX, holo-ACP synthase CitX. Members of this protein family are the CitX protein, or CitX domain of the CitXG bifunctional protein, of the citrate lyase system. CitX transfers the prosthetic group 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA to the citrate lyase gamma chain, an acyl carrier protein. This enzyme may be designated holo-ACP synthase, holo-citrate lyase synthase, or apo-citrate lyase phosphoribosyl-dephospho-CoA transferase. In a few genera, including Haemophilus, this protein occurs as a fusion protein with CitG (2.7.8.25), an enzyme involved in prosthetic group biosynthesis. This CitX family is easily separated from the holo-ACP synthases of other enzyme systems. [Energy metabolism, Fermentation, Protein fate, Protein modification and repair].	5.54697e-86
NZ_CP011976.1\|WP_002888321.1\|4556348_4557197_+\|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)-ApaH	gnl\|CDD\|273208	TIGR00668, Bis5'-nucleosyl-tetraphosphatase_symmetrical, bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Diadenosine 5',5"'-P1,P4-tetraphosphate (Ap4A) is a regulatory metabolite of stress conditions. It is hydrolyzed to two ADP by this enzyme. Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase. [Cellular processes, Adaptations to atypical conditions].	0
NZ_CP011976.1\|WP_002888340.1\|4547044_4548670_+\|sensor-histidine-kinase	gnl\|CDD\|225827	COG3290, CitA, Signal transduction histidine kinase regulating citrate/malate metabolism [Signal transduction mechanisms].	6.55037e-173
NZ_CP011976.1\|WP_002888332.1\|4549390_4550218_-\|co-chaperone-DjlA	gnl\|CDD\|236512	PRK09430, djlA, co-chaperone DjlA.	2.63694e-164

>NZ_CP011976.1|WP_002888345.1|4545355_4546720_-|2-hydroxycarboxylate-transporter-family-protein
MSTTDNAFSATLEPIDTPKTTLKQRWWHIMDNWKVGIVPLPLFLLAGGLIALDCLGGKLPSDIVVMVATLAFFGFACGEFGKRLPVLGKLGAAAICATFIPSALVHYGLLPDVVIESTTKFYKSTNILYLYICCIIVGSIMSMNRTTLIQGFLKIFFPMLCGEVVGMLVGIGVGTLLGMEPFQVFFFIVLPIMAGGVGEGAIPLSMGYAALMHMEQGVALGRVLPMVMLGSLTAIVISGCLNQLGKRFPHLTGEGQLMPNRSHETRSLSESEGVSGKTDVGTLASGALLAVLLYMMGMLGHKLIGLPAPVGMLFLAVLLKLANVVSPRLQEGSQMVYKFFRTAVTYPILFAVGVAITPWQELVNAFTLTNLLVIVSTVSALVATGFLVGKKIGMHPIDVAIVSCCQSGQGGTGDVAILTAGNRMSLMPFAQIATRIGGAINVSLGLLFLSHYLA
>NZ_CP011976.1|WP_002888347.1|4544636_4545176_-|citrate-lyase-holo-[acyl-carrier-protein]-synthase
MSVDTPAQAGVSIDALLAAKEQRAARQADWLAHYQQPVISLTLVTPGAVKDSIRYRNMMGVALQACDQLLWKHRWQTLDRQVLWLPTGPEALWCVAHPASEIKAMCSTLEQSHPLGRLWDIDVICPQNGLVGRQSLGESQRRCLLCDEPAHACARSRRHDTDLVVARVEQMIDAWFARD
>NZ_CP011976.1|WP_002888348.1|4543902_4544562_+|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA
MAMENYNPPQDPWLVILYQDEHIMVVNKPSGLLSVPGRLEEHKDSVMTRIQRDFPQAESVHRLDMATSGVIVVALNKAAERELKRQFREREPKKQYVARVWGHPQPAEGLVDLPLICDWPNRPKQKVCYETGKAAQTEYEVLEYAEDNTARVRLKPITGRSHQLRVHMLALGHPILGDRFYATPEALAMAPRLLLHAETLTITHPAYGNAMTFRAPIDF
>NZ_CP011976.1|WP_004151368.1|4540983_4543890_+|RNA-polymerase-associated-protein-RapA
MPFTLGQRWISDTESELGLGTVVALDARMVTLLFPAIGENRLYSRNDSPITRVMFNPGDTITSHEGWQLHVDKVNEENGLLSYTGTRLDTQEANVTLREVLLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKFQSEQYRMPWSGLRGQRTSLIPHQLHIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIVVPETLQHQWLVEMLRRFNLRFSLFDDERYAEAQHDAYNPFETEQLVICSLDFVRRSKQRLEHLCDAEWDLMVVDEAHHLVWSEEAPSREYQAIEQLAERVPGILLLTATPEQLGMESHFARLRLLDPNRFHDFEQFVEEQQNYRPVADAVALLLAGNKLSDSELNTLGDLIGEQDIEPLLQAANSDREDAQAARQELISMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIRLPLPTQYQTAIKVSGIMGARKTAEERARDMLYPEQIYQEFEGDTGTWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASNLVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTVYDSVHDELINYLAAPESIDGFDDLIKSCRQQHDALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTSLIAFSMNLFDIVGINQDDRGENLIVLTPSDHMLVPDFPGLPEDGCTITFERDVALSREDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLLELIYVVEAQAPKQLQLNRFLPATPVRMLLDKNGNNLAAQVEFESFNRQLSAVNRHTGSKLVNAVQQDVHAILQQGEAQIAKAAQGLIDAARNEADEKLTAELSRLEALKAVNPNIRDDELAGIESNRQQVMDALAQAGWRLDALRLIVVTHQ
>NZ_CP011976.1|WP_002888349.1|4538438_4540796_+|DNA-polymerase-II
MTQPRAGFLLTRHWRDTPQGTELSFWLATDDGPLQVTLPPQESVAFIPEAQRAQAERLLQGEKGLRFAPLALKDFHRQPIVGLYCRAHRQLMRLEKMLRDSGVTVYEGDIRPPERYLMERFITAPVWVEGETRGSQLVNARMKPNPDYRPPLKWVSLDIETSRHGELYCIGLEGCGQRVVYMLGPEPETPPDVDFELVFIASRPLLLEKLNAWFAEHDPDVLIGWNVVQFDLRVLQKHAERYRIPLRLGRGNSELEWREHGFKNGVFFAQANGRLIIDGIDALKSAFWNFSSFSLEAVARELLGEGKAIDNPWDRMDEIDRRFHEDKPALAIYNLQDCELVTRIFHKTEIMPFLLERATVNGLPADRHGGSVAAFSHLYFPRMHRLGYVAPNLGDVPPQASPGGYVMDSRPGLYDSVLVLDYKSLYPSIIRTFLIDPVGLIEGLAQPDDQHSIEGFLGARFSRDKHCLPGIVSQIWHGRDEAKRQHNKPLSQALKIIMNAFYGVLGTSACRFFDPRLASSITMRGHAIMRQTKALIEAKGYDVIYGDTDSTFVWLKRPHSEAQAAEIGRELVSHVNAWWAQELSKSQLTSALELEYETHFCRFLMPTIRGADTGSKKRYAGMIQEGDAQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNQPYQDYVRETIARLMNGELDEQLVYRKRLRRPLAEYQRNVPPHVRAARLADEHNLKLGRAQQYQQRGTIKYVWTTSGPEPVDYQQSPLDYDHYLTKQLQPVAEGILPFVNDDFATIVTGQLGLF
>NZ_CP011976.1|WP_002888353.1|4537567_4538263_+|L-ribulose-5-phosphate-4-epimerase
MLEDLKRQVLEANLALPKHNLVTLTWGNVSAVDREKGVFVIKPSGVDYRVMTADDMVVVSLESGEVVEGNKKPSSDTPTHRLLYQAFPTLGGIVHTHSRHATIWAQAGQSIPATGTTHADYFYGPVPCTRLMTDAEINGDYEWETGNVIVETFRQQGIDPAQMPGVLVHSHGPFAWGKNAEDAVHNAIVLEEIAYMGIFCRQLAPQLPAMQQTLLDKHYLRKHGAKAYYGQ
>NZ_CP011976.1|WP_002888357.1|4535927_4537430_+|L-arabinose-isomerase
MTIFDNYEVWFVIGSQHLYGPEALRQVTKHAEHVVNSLNAEAKLPCKLVLKPLGTTPDEITHICRDANYDDKCAGLVVWLHTFSPAKMWINGLTILNKPLLQFHTQYNAALPWDSIDMDFMNLNQTAHGGREFGFIGARMRQQHSVVTGHWQDKEAHQRIGGWMRQAVSKQDTRHLKVCRFGDNMREVAVTDGDKVAAQIKFGFSVNTWAVGDLVQVVNSISDGDISALVDEYESSYRLTPAAQVHGEKRQNVLDAARIELGMKRFLEQGGFHAFTTTFEDLHGLKQLPGLAVQRLMQQGYGFAGEGDWKTAALLRIMKVMSTGLQGGTSFMEDYTYHFDNGNDLVLGSHMLEVCPTIATVEKPILDVQPLGIGGKADPARLIFNTQTGPAIVASLIDLGDRFRLLVNTIETVPTPHDLPKLPVANALWKAQPDLRTASEAWIIAGGAHHTVFSHALNLDDMRQFAELHDIELTVIDNDTRLPSFKDALRWNEVYYGSKR
>NZ_CP011976.1|WP_020317459.1|4534207_4535917_+|ribulokinase
MAIAIGLDFGSDSVRALAVECASGAELATSVEWYPRWREGQYCDGANNRFRHHPRDYIESMEAALKSVLASLSAEQRADVVGIGVDSTGSTPAPVDAEGNVLALREEFADNPNAMFVLWKDHTAVEEAEAITHLCHQPGKEDYSRYIGGIYSSEWFWAKILHVTREDSAVAQAAASWVELCDWVPALLSGTTRPQDLRRGRCSAGHKSLWHESWGGLPPASFFDELDPIINQHLAWPLFTDTWTADVPVGTLSAEWAQRLGLSQSVAISGGAFDCHMGAVGAGAQPNALVKVIGTSTCDILIADKESVGERTVKGICGQVDGSVVPHFIGMEAGQSAFGDIYAWFGRILGWPLEQLAQQQPALREQIKASQKQLLPALTEAWANNPSLEHLPVVLDWFNGRRTPNANQRLKGVITDLNLATDAPALFGGLIAATAFGARAIMECFTEQGIPVNNVMALGGIARKNQVIMQACCDVLNRPLQIVASDQCCALGAAIFAAVAAGVYDDIPAAQQRMASQVETTLQPRPAQAQRFEQLYQRYQQWSVSAEQHYLPSAAKAEKAPQSKAALTH
>NZ_CP011976.1|WP_002888370.1|4533024_4533870_-|arabinose-operon-transcriptional-regulator-AraC
MAETQNDPLLPGYSFNAHLVTGLTPIEAQGYLDFFIDRPLGMKGYILNLTIRGEGVINNHGEQFVCRPGDMLLFPPGEIHHYGRHPDASEWYHQWVYFRPRAYWHEWLNWPTIFAQTGFFRPDEQWQARFGELFGQIVDAGQGAGRYSELLAINLLEQLLLRRMEAINESLHPPLDNRVREACQYISDHLADSHFDIASVAQHVCLSPSRLSHLFRQQLGVSVLGWREDQRISQAKLLLSTTRMPIATVGRNVGFEDQLYFSRVFKKCTGASPSEFRAGCE
>NZ_CP011976.1|WP_002888373.1|4532128_4532896_-|DedA-family-protein
MQALLEHFITQSTVYSLLAVMLVAFLESLALVGLILPGTVMMAGLGALIGGGEVNFWQAWLAGIVGCLLGDWISFWLGWRFKKPLHRWSFMKKNRALLEKTEHALHQHSMITILIGRFVGPTRPLVPMVAGMLDLPVAKFVLPNIIGCLLWPPLYFLPGILAGAAIDIPADENSASFKWLLLGAALLAWLAGWLCWRLWRSAKTSGDRLTRWLPRGRLLWLSPLMVALAATALTFVFRHPLMPVYLAILHKVIAR
>NZ_CP011976.1|WP_002888340.1|4547044_4548670_+|sensor-histidine-kinase
MKLSFQYKLFISLVAFFSVLFIALGIYYYFDASRQLYQEMSARAKIQAEEIALMPNLRQQVSRHDPQAIQAFMQQIAAHSDASFIVIGDRQGVHLFHSVHPEWVGTRLVGGDNQAVLEGKSITTIRKGGLGVSLRSKTPIVDDAGRVIGIVSVGYLTSYLDSITLTKVINIFIAAVLLLIALFIFSWYFTRSIKKQIFSLEPREIGLLVRQQKAMMESIFEGVIVIDRQRRIEVINHAARSLLGLSQPARQLRGQSIDSVISPQPFFASGDMLERDTHDELCRFNQLTVLASRVRIMLENTLQGWVITFRDRNEINALTAQLSQVKRYVDNLRIMRHEQLNRMTTLSGLLHMGHYDEAIRYIQAQSEHAQELLDFISSHFHSPTLCGLLLGKATRAREKGVALSFDPACRIDRPLPSLMESELISIIGNLLDNAIEATQRAELPHEPVEVLIQLNARELIIEVADRGVGIRPDIRERIFERGVTTKTRGDHGIGLYLIEHYVTQAGGTIEVADNAPRGTIFTLFIPADAHACPQPEAHDAS
>NZ_CP011976.1|WP_002888337.1|4548659_4549358_+|response-regulator
MHHDLVDVLIIEDESELARLHAELVQKHPRLRLAGMAASLAQARQLLHATPPQLVLLDNYLPDGKGVTLMTDPALATSQCSVIFITAASDMETCSQAIRNGAFDYILKPVSWKRLSQSLERFIQFYDQQREWKIVDQQNVDSLYQLQAKNYRVDSGSKGIEEKTLALVQGLFSDREAHCFSVDEVVSAAGLSKTTARRYLEHGVETGFLEVEMLYGKIGHPRRLYRRAKVKS
>NZ_CP011976.1|WP_002888332.1|4549390_4550218_-|co-chaperone-DjlA
MQYLGKVIGVAVALLMGGGFWGVVLGFLVGHMFDRARSRRLNLFANQQERQSLFFSTTFEVMGHLTKSKGRVTEADIHVANVLMDRMNLHGASRTAAQQAFRDGKADNYPLREKMRQLRSVCFGRFDLIRMFLEIQLQAAFADGELHPNEREVLFVIADELGISRAQFDQFLRMMQGGAQFGGGSQQRSYGQHGGNAGWQQAQRGPTLEDACNVLGVKPTDDAATVKRAYRKLMNEHHPDKLVAKGLPPEMMEMAKQKAQEIQKAWELIKEQRGF
>NZ_CP011976.1|WP_004147026.1|4550461_4552810_+|LPS-assembly-protein-LptD
MKKRIPSLLATMIASALYSQQGLAADLATQCMLGVPSYDRPLVEGRPGDLPVTINADHAKGNYPDNAVFTGNVDINQGNSRLRADEVQLHQQQAAGQAQPVRTVDALGNVHYDDNQVILKGPKAWSNLNTKDTNVWQGDYQMVGRQGRGTADLMKQRGENRYTILENGSFTSCLPGSDTWSVVGSEVIHDREEQVAEIWNARFKLGSVPIFYSPYLQLPVGDKRRSGFLIPNAKYSTKNGVEFSLPYYWNIAPNFDATITPHYMNKRGGVMWENEFRYLTQLGSGLTEFDYLPSDKVYEDDHSSDSNSRRWLFYWNHSGVIDQVWRLNADYTKVSDPDYFNDFSSKYGSSTDGYATQKFSAGYVNQNFDATVSTKQFQVFDRESSNSYSAEPQLDVNYYQNDVGPFDTHLYGQVAHFVNSNNNMPEATRVHFEPTINLPLSNGWGSLNTEAKLLATHYQQSNLDKYNAANGTDYKESVSRVMPQFKVDGKMVFERDLQEGFTQTLEPRVQYLYVPYRDQSEIGNYDSTLLQSDYTGLFRDRTYSGLDRIASANQVTTGLTSRVYDAAAVERFNISVGQIYYFTESRTGDDNINWENNDTTGSLVWAGDTYWRIADEWGLRGGIQYDTRLDNVATGNGTIEYRRDENRLVQLNYRYASPEYIQATLPSYSTAAQYKQGISQVGMTASWPIVDRWSVVGAYYYDTNTRKAANQMLGVQYNSCCYAIRLGYERKVNGWNSNDNGGESKYDNTFGINIELRGLSSNYGLGTQQMLRSNILPYQSSL
>NZ_CP011976.1|WP_002888329.1|4552864_4554151_+|peptidylprolyl-isomerase-SurA
MKNWKTLLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAGQAGQQLPDDATLRHQILERLIMDQIVLQMGQKMGVKISDDQLDQAIANIAKQNNMTLDQMRSRLAYEGINYNTYRNQIRKEMLISEVRNNEVRRRITVLPQEVEALAKQIGDQNDASTELNLSHILIPLPENPTSDEVAAAQEQANSIVEQARNGANFGKLAITYSADQQALKGGQMGWGRIQELPGIFAQALSTAKKGDIVGPIRSGVGFHILKVNDLRGGTQNISVTEVHARHILLKPSPIMNDAQAQAKLEQIAAEIKSGKITFAQAAKTYSEDPGSANQGGDLGWATPDIFDPAFRDALMRLNKGQTSGPVHSSFGWHLIELLDSRQVDRTDAAQKDRAYRMLMNRKFSEEAATWMQEQRASAYVKILSN
>NZ_CP011976.1|WP_002888327.1|4554156_4555146_+|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA
MPETRKVVITPGEPAGIGPDLVVQLAQRDWPVELVICADGALLTDRAKRLGLPLSLLPYDPAQPPVPQRAGTLTLLNVPLNVPAEPGVLNVQNGAYVVETLARACDGCLSGEFAALVTGPVHKGNINDAGIAFTGHTEFFEERAKASKVVMMLATEELRVALVTTHLPLKAISEAITPELLREIITILDHDLRTKFGIAQPHVLVCGLNPHAGEGGHMGTEEIDTIIPVLEEMRAKGMNLSGPLPADTLFQPKYLDHADAVLAMYHDQGLPVLKYQGFGRGVNITLGLPFIRTSVDHGTALELAGQGKADVGSFITALNLAIKMIVNTQ
>NZ_CP011976.1|WP_002888324.1|4555142_4555964_+|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA
MNNRVHQGHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALTEPVGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTMNFGELAEKMGQPLRVFGNLPYNISTPLMFHLFSYTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYCQVIPVLEVPPSAFTPPPKVDSAVVRLVPHSTMPYPVKEIRVLSRITTEAFNQRRKTIRNSLGNLFSVEVLTELGIDPAMRAENISVAQYCLMANWLSDNLPTKES
>NZ_CP011976.1|WP_002888323.1|4555966_4556344_+|Co2+/Mg2+-efflux-protein-ApaG
MIHSPRVCVQVQSVYIESQSSPEEERYVFAYTVTIRNLGRSQVQLLGRYWLITNGHGRETEVQGEGVVGEQPHIPAGGEYQYTSGAVIETPLGTMQGHYEMIDIDGAPFRIEIPVFRLAVPTLIH
>NZ_CP011976.1|WP_002888321.1|4556348_4557197_+|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)-ApaH
MSTYLIGDVHGCYDELIALLAQVEFDPRRDTLWLTGDLVARGPGSLEVLRYVKSLGDSVRLVLGNHDLHLLAVFAGISRNKPKDRLKPLLEAPDADELLNWLRRQPLLQVDEEKKLVMAHAGITPQWDLETAQQCARDVEAVLSSDSYPFFLDAMYGDMPNHWSNELSGLARLRFISNAFTRMRYCFPNGQLDMYSKEAPEDAPAPLKPWFAIPGPVSNAYSIAFGHWASLEGRGTPEGIYALDTGCCWGGELTCLRWEDKQYFTQPSNRQKSLDEGEAVAS
>NZ_CP011976.1|WP_002888320.1|4557452_4557932_-|type-3-dihydrofolate-reductase
MISLIAALAVDRVIGMENAMPWNLPADLAWFKRNTLNKPVVMGRLTWESIGRPLPGRKNIVISSKPGSDDRVQWVSSVEEAIAACGDVEEIMVIGGGRVYEQFLPKAQKLYLTHIDAEVEGDTHFPDYDPDEWESVFSEFHDADAQNSHSYCFEILERR

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

445193 : 478452

uncultured_Caudovirales_phage(75.0%)

head,tail,protease,tRNA,integrase,portal,capsid,terminase

attL 462802:462819|attR 478797:478814

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002919147.1\|445193_446141_-\|tRNA	methionyl-tRNA formyltransferase	E3SNR5	Prochlorococcus_phage	2.2e-07	37.2
WP_002919144.1\|446155_446665_-	peptide deformylase	E3SLL2	Synechococcus_phage	2.6e-18	40.3
WP_002919139.1\|446793_447918_+	DNA-protecting protein DprA	NA	NA	NA	NA
WP_002919137.1\|447889_448363_+	DUF494 domain-containing protein	NA	NA	NA	NA
WP_004145330.1\|448388_448931_+	topoisomerase DNA-binding C4 zinc finger domain-containing protein	NA	NA	NA	NA
WP_002919132.1\|448935_449508_+	L-threonylcarbamoyladenylate synthase type 1 TsaC	NA	NA	NA	NA
WP_002919126.1\|449511_450330_+	shikimate dehydrogenase	NA	NA	NA	NA
WP_002919125.1\|450326_450584_+	DUF1488 domain-containing protein	NA	NA	NA	NA
WP_002919123.1\|450559_451114_-	gamma carbonic anhydrase family protein	NA	NA	NA	NA
WP_002919103.1\|456910_457132_-	membrane protein	NA	NA	NA	NA
WP_002919102.1\|457425_460536_-	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA
WP_002919101.1\|460548_461688_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_004150972.1\|462066_462717_+	acrEF/envCD operon transcriptional regulator	NA	NA	NA	NA
462802:462819	attL	NA	NA	NA	NA
WP_004150971.1\|462992_464219_+\|integrase	site-specific integrase	A0A2H4JB45	uncultured_Caudovirales_phage	1.8e-150	62.2
WP_004150970.1\|464311_465253_+	hypothetical protein	NA	NA	NA	NA
WP_001547839.1\|465434_465719_+	AlpA family phage regulatory protein	NA	NA	NA	NA
WP_004150969.1\|465729_466509_+	phage antirepressor KilAC domain-containing protein	Q8HA02	Enterobacteria_phage	6.2e-40	51.5
WP_106918304.1\|466960_467230_+	host cell division inhibitor Icd-like protein	A0A2H4JGW3	uncultured_Caudovirales_phage	2.4e-44	94.4
WP_001549752.1\|467222_467411_+	hypothetical protein	NA	NA	NA	NA
WP_004150967.1\|467403_467718_+	hypothetical protein	NA	NA	NA	NA
WP_004150966.1\|467714_468083_+	hypothetical protein	A0A2H4JCX7	uncultured_Caudovirales_phage	3.7e-51	81.1
WP_001549749.1\|468079_468445_+	hypothetical protein	NA	NA	NA	NA
WP_004150965.1\|468444_470580_+	DUF927 domain-containing protein	A0A1W6JPG0	Morganella_phage	3.4e-205	62.4
WP_004150964.1\|470922_471258_+	hypothetical protein	NA	NA	NA	NA
WP_004150963.1\|471306_471819_-	hypothetical protein	NA	NA	NA	NA
WP_001549743.1\|472082_473249_+\|capsid	phage major capsid protein	A0A2H4JED2	uncultured_Caudovirales_phage	9.8e-207	95.9
WP_001547826.1\|473300_473861_+\|head,protease	HK97 family phage prohead protease	A0A2H4JB68	uncultured_Caudovirales_phage	1.2e-98	95.7
WP_004150962.1\|473862_475104_+\|portal	phage portal protein	A0A2H4JFJ9	uncultured_Caudovirales_phage	1.0e-230	96.5
WP_004150961.1\|475100_475436_+\|head	phage head closure protein	A0A2H4JHK5	uncultured_Caudovirales_phage	3.7e-26	57.8
WP_001547824.1\|475432_475732_+\|head,tail	phage gp6-like head-tail connector protein	A0A2H4JD08	uncultured_Caudovirales_phage	3.4e-39	80.8
WP_004150959.1\|475731_476175_+	HNH endonuclease	A0A2H4JAS8	uncultured_Caudovirales_phage	2.8e-77	91.8
WP_004150957.1\|476167_476320_+	hypothetical protein	A0A2H4JCY9	uncultured_Caudovirales_phage	2.4e-17	88.0
WP_000113647.1\|476450_476807_+\|terminase	phage terminase small subunit P27 family	A0A2H4JHS3	uncultured_Caudovirales_phage	5.5e-60	99.2
WP_004150955.1\|476790_478452_+\|terminase	terminase large subunit	A0A2H4JB64	uncultured_Caudovirales_phage	0.0e+00	98.0
478797:478814	attR	NA	NA	NA	NA

DBSCAN-SWA_2

1207680 : 1281816

Salmonella_phage(78.26%)

head,tail,integrase,tRNA,portal,capsid,lysis,terminase,plate

attL 1205974:1206020|attR 1242541:1242587

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1205974:1206020	attL	NA	NA	NA	NA
WP_004151020.1\|1207680_1208706_-\|integrase	site-specific integrase	A0A1S6L016	Salmonella_phage	1.5e-190	93.8
WP_004151019.1\|1208708_1209338_-	phage repressor protein CI	A0A1S6KZZ7	Salmonella_phage	1.4e-61	54.5
WP_001397669.1\|1209460_1209703_+	hypothetical protein	A0A1S6KZZ6	Salmonella_phage	4.0e-38	98.8
WP_004151018.1\|1209735_1210245_+	phage regulatory CII family protein	A0A1S6L008	Salmonella_phage	1.1e-77	85.8
WP_004151017.1\|1210252_1210453_+	DUF2724 domain-containing protein	A0A1S6L005	Salmonella_phage	4.5e-19	68.8
WP_004144796.1\|1210416_1210755_+	DUF5347 domain-containing protein	A0A218M4I7	Erwinia_phage	6.2e-29	58.0
WP_004151016.1\|1210822_1211056_+	DUF2732 family protein	A0A1S6L021	Salmonella_phage	6.0e-31	90.9
WP_004151014.1\|1211055_1211283_+	TraR/DksA family transcriptional regulator	A0A1S6L007	Salmonella_phage	5.1e-35	92.0
WP_004151013.1\|1211279_1212131_+	DNA adenine methylase	A0A1S6L011	Salmonella_phage	2.2e-115	75.4
WP_004151012.1\|1212127_1214512_+	replication endonuclease	A0A1S6L028	Salmonella_phage	0.0e+00	87.9
WP_004151011.1\|1214674_1214863_+	hypothetical protein	A0A1S6L006	Salmonella_phage	2.2e-23	90.3
WP_004151010.1\|1214874_1215108_+	DinI family protein	A0A0M4S6H1	Salmonella_phage	2.0e-34	96.1
WP_004151009.1\|1215203_1215887_-	hypothetical protein	NA	NA	NA	NA
WP_004151008.1\|1215873_1216953_-	hypothetical protein	NA	NA	NA	NA
WP_004151007.1\|1216952_1217954_-	hypothetical protein	NA	NA	NA	NA
WP_024940854.1\|1218475_1218745_+	hypothetical protein	D2IZW1	Enterococcus_phage	1.4e-15	41.3
WP_004151006.1\|1218801_1219845_-\|portal	phage portal protein	A0A1S6KZW5	Salmonella_phage	3.1e-172	85.6
WP_019405037.1\|1219844_1221608_-\|terminase	terminase ATPase subunit family protein	A0A1S6KZW3	Salmonella_phage	0.0e+00	91.8
WP_004151004.1\|1221748_1222582_+\|capsid	GPO family capsid scaffolding protein	A0A1S6KZW9	Salmonella_phage	4.4e-100	77.6
WP_004151003.1\|1222598_1223651_+\|capsid	phage major capsid protein, P2 family	A0A1S6KZZ3	Salmonella_phage	6.8e-175	91.0
WP_004134644.1\|1223654_1224308_+\|terminase	terminase endonuclease subunit	A0A1S6KZX1	Salmonella_phage	1.9e-90	80.0
WP_004151002.1\|1224403_1224868_+\|head	head completion/stabilization protein	A0A1S6KZW8	Salmonella_phage	1.5e-73	85.7
WP_004151001.1\|1224867_1225071_+\|tail	tail protein X	E5G6M9	Salmonella_phage	9.8e-30	89.6
WP_004134639.1\|1225074_1225290_+	hypothetical protein	E5G6N0	Salmonella_phage	6.1e-30	88.7
WP_004151000.1\|1225270_1225780_+	lysozyme	E5G6N1	Salmonella_phage	1.6e-81	85.2
WP_004150999.1\|1225784_1226168_+	hypothetical protein	A0A1S6KZZ2	Salmonella_phage	1.9e-18	45.4
WP_004150998.1\|1226164_1226593_+\|lysis	LysB family phage lysis regulatory protein	A0A1S6KZX8	Salmonella_phage	7.1e-54	82.5
WP_072093160.1\|1226567_1226726_+	hypothetical protein	A0A1S6KZX6	Salmonella_phage	9.0e-15	75.0
WP_004150997.1\|1226688_1227111_+\|tail	phage tail protein	A0A1S6KZY0	Salmonella_phage	8.2e-63	83.2
WP_004150996.1\|1227103_1227550_+	phage virion morphogenesis protein	A0A1S6L001	Salmonella_phage	2.5e-54	72.3
WP_004150995.1\|1227572_1228439_-	hypothetical protein	NA	NA	NA	NA
WP_004150994.1\|1228533_1229106_+\|plate	phage baseplate assembly protein V	E5G6N6	Salmonella_phage	1.4e-76	70.8
WP_004150993.1\|1229102_1229465_+	GPW/gp25 family protein	A0A1S6KZZ4	Salmonella_phage	8.4e-48	85.6
WP_004150992.1\|1229451_1230360_+\|plate	baseplate assembly protein	E5G6N8	Salmonella_phage	1.9e-109	68.9
WP_004152935.1\|1230352_1231024_+\|tail	phage tail protein I	A0A1S6L000	Salmonella_phage	3.2e-61	58.9
WP_004150990.1\|1231025_1232975_+	CotH kinase family protein	Q6QI97	Burkholderia_phage	1.0e-06	38.9
WP_004200602.1\|1232984_1234103_+	hypothetical protein	A0A248XD67	Klebsiella_phage	4.4e-55	38.0
WP_004150988.1\|1234154_1235228_+\|tail	phage tail protein	A0A1S6KZZ8	Salmonella_phage	6.6e-40	53.6
WP_004150987.1\|1235376_1236549_+\|tail	phage tail sheath protein	A0A1S6KZY7	Salmonella_phage	3.4e-207	91.5
WP_004150986.1\|1236558_1237074_+\|tail	phage major tail tube protein	E5G6P8	Salmonella_phage	1.4e-80	84.2
WP_004150985.1\|1237126_1237426_+\|tail	phage tail assembly protein	E5G6P9	Salmonella_phage	8.2e-33	78.0
WP_002896220.1\|1237440_1237560_+\|tail	GpE family phage tail protein	E5G6Q0	Salmonella_phage	2.2e-13	87.2
WP_004150984.1\|1237552_1240183_+\|tail	phage tail tape measure protein	E5FFG5	Burkholderia_phage	8.9e-115	41.9
WP_004150983.1\|1240179_1240665_+\|tail	phage tail protein	E5G6Q2	Salmonella_phage	5.2e-61	80.1
WP_004150982.1\|1240661_1241756_+	phage late control D family protein	E5G6Q3	Salmonella_phage	2.4e-170	83.6
WP_004150981.1\|1241822_1242041_+	ogr/Delta-like zinc finger family protein	Q53ZE7	Salmonella_virus	1.9e-26	72.2
WP_004150980.1\|1242068_1242446_-	hypothetical protein	NA	NA	NA	NA
WP_002914164.1\|1243049_1243532_-	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	2.3e-29	47.4
1242541:1242587	attR	NA	NA	NA	NA
WP_004188817.1\|1243642_1244119_+	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA
WP_002914161.1\|1244108_1244399_+	RnfH family protein	NA	NA	NA	NA
WP_002914160.1\|1244465_1244807_-	outer membrane protein assembly factor BamE	NA	NA	NA	NA
WP_002914159.1\|1244954_1246616_-	DNA repair protein RecN	NA	NA	NA	NA
WP_002914158.1\|1246702_1247581_-	NAD(+) kinase	NA	NA	NA	NA
WP_002914155.1\|1247705_1248296_+	nucleotide exchange factor GrpE	NA	NA	NA	NA
WP_004149392.1\|1248415_1249702_-	HlyC/CorC family transporter	NA	NA	NA	NA
WP_002914153.1\|1249721_1250513_-	inner membrane protein YpjD	NA	NA	NA	NA
WP_002914152.1\|1250676_1252041_+	signal recognition particle protein	NA	NA	NA	NA
WP_002914149.1\|1252300_1252549_+	30S ribosomal protein S16	NA	NA	NA	NA
WP_004150977.1\|1252567_1253116_+	ribosome maturation factor RimM	NA	NA	NA	NA
WP_002914147.1\|1253147_1253915_+\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
WP_002914145.1\|1253954_1254302_+	50S ribosomal protein L19	NA	NA	NA	NA
WP_002914119.1\|1254421_1254880_+	DUF2946 domain-containing protein	NA	NA	NA	NA
WP_002914118.1\|1254936_1256307_+	PepSY domain-containing protein	NA	NA	NA	NA
WP_002914117.1\|1256315_1256798_-	OmpA family protein	NA	NA	NA	NA
WP_002914116.1\|1256811_1258035_-	diguanylate cyclase DgcN	NA	NA	NA	NA
WP_004174804.1\|1258027_1258537_-	YfiR family protein	NA	NA	NA	NA
WP_002914114.1\|1258879_1259950_+	3-deoxy-7-phosphoheptulonate synthase AroF	A0A0F6R6T6	Escherichia_coli_O157_typing_phage	1.8e-90	51.5
WP_002914113.1\|1259959_1261081_+	bifunctional chorismate mutase/prephenate dehydrogenase	NA	NA	NA	NA
WP_002914112.1\|1261143_1262016_+	SMP-30/gluconolactonase/LRE family protein	NA	NA	NA	NA
WP_004150975.1\|1262012_1263173_-	bifunctional chorismate mutase/prephenate dehydratase	NA	NA	NA	NA
WP_100250063.1\|1263273_1263321_-	pheA operon leader peptide PheL	NA	NA	NA	NA
WP_002914111.1\|1263427_1263763_-	ribosome-associated translation inhibitor RaiA	NA	NA	NA	NA
WP_004145664.1\|1264033_1264771_-	outer membrane protein assembly factor BamD	NA	NA	NA	NA
WP_002914110.1\|1264902_1265883_+	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	NA	NA	NA	NA
WP_002914109.1\|1265879_1266611_+	polyphenol oxidase	NA	NA	NA	NA
WP_004150973.1\|1266740_1269314_+	ATP-dependent chaperone ClpB	H6X3M6	Enterobacteria_phage	6.9e-128	35.4
WP_002914097.1\|1275279_1276578_+	MFS transporter	Q6JIH2	Burkholderia_virus	3.1e-44	31.5
WP_002914095.1\|1276581_1276905_-	YfiM family lipoprotein	NA	NA	NA	NA
WP_002914094.1\|1276946_1278302_-	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA
WP_004151994.1\|1278422_1281083_-	protein lysine acetyltransferase	NA	NA	NA	NA
WP_002914092.1\|1281117_1281816_-\|tRNA	tRNA-uridine aminocarboxypropyltransferase	NA	NA	NA	NA

DBSCAN-SWA_3

1358640 : 1405252

Salmonella_phage(44.0%)

tail,integrase,holin,capsid,terminase

attL 1361204:1361218|attR 1372384:1372398

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004151980.1\|1358640_1360107_+	IMP dehydrogenase	A0A1V0SHK8	Klosneuvirus	1.2e-87	38.7
WP_004151979.1\|1360174_1361752_+	glutamine-hydrolyzing GMP synthase	NA	NA	NA	NA
1361204:1361218	attL	NA	NA	NA	NA
WP_004152549.1\|1361944_1363195_+\|integrase	tyrosine-type recombinase/integrase	A0A1X9TCT6	Enterobacter_phage	1.4e-206	85.3
WP_004152548.1\|1363211_1363403_-	hypothetical protein	NA	NA	NA	NA
WP_004152547.1\|1363399_1363582_-	hypothetical protein	NA	NA	NA	NA
WP_004152546.1\|1363578_1364172_-	adenine methylase	T1SA14	Salmonella_phage	4.3e-110	92.4
WP_004152545.1\|1364168_1364327_-	DUF1317 family protein	T1SAR0	Salmonella_phage	1.9e-17	78.8
WP_004153052.1\|1364319_1364613_-	PerC family transcriptional regulator	T1S9J5	Salmonella_phage	8.9e-32	71.1
WP_004152543.1\|1364722_1364971_-	AlpA family phage regulatory protein	A0A0F6TJ45	Escherichia_coli_O157_typing_phage	1.1e-27	69.5
WP_004152542.1\|1365022_1366045_-	recombination protein RecT	Q858E1	Salmonella_phage	2.4e-180	95.3
WP_004152541.1\|1366054_1366954_-	YqaJ viral recombinase family protein	Q858E0	Salmonella_phage	1.5e-159	93.0
WP_004164029.1\|1366950_1367250_-	hypothetical protein	A0A0F6R7M4	Escherichia_coli_O157_typing_phage	2.1e-20	54.5
WP_004164037.1\|1367246_1367396_-	hypothetical protein	G9L6A5	Escherichia_phage	7.9e-13	84.2
WP_004152539.1\|1367616_1368198_-	helix-turn-helix transcriptional regulator	Q858D7	Salmonella_phage	1.9e-65	64.8
WP_004152538.1\|1368351_1368585_+	hypothetical protein	T1SAR5	Salmonella_phage	9.2e-24	66.2
WP_004152537.1\|1368731_1368941_+	hypothetical protein	A0A193GYW4	Enterobacter_phage	1.8e-26	78.3
WP_004207253.1\|1368940_1369708_+	hypothetical protein	A0A193GZ86	Enterobacter_phage	8.9e-140	91.4
WP_004152535.1\|1369704_1370490_+	replication protein	A0A193GYX1	Enterobacter_phage	8.2e-133	87.4
WP_004152534.1\|1370609_1370957_+	DUF1064 domain-containing protein	A0A0F6R8N5	Escherichia_coli_O157_typing_phage	5.0e-50	82.6
WP_004152532.1\|1371149_1371560_+	hypothetical protein	A0A2P1MXC5	Escherichia_phage	3.1e-14	42.2
WP_004152531.1\|1371543_1371735_+	hypothetical protein	NA	NA	NA	NA
WP_004152530.1\|1371731_1372157_+	hypothetical protein	NA	NA	NA	NA
WP_004152529.1\|1372153_1372897_+	hypothetical protein	A6N3G8	Burkholderia_virus	1.5e-19	59.5
1372384:1372398	attR	NA	NA	NA	NA
WP_004152528.1\|1372896_1373067_+	hypothetical protein	A0A2R2Z308	Escherichia_phage	2.5e-15	69.6
WP_004141386.1\|1373067_1373280_+	hypothetical protein	A0A0F6TJE4	Escherichia_coli_O157_typing_phage	8.1e-11	45.5
WP_004152527.1\|1373276_1373945_+	DUF551 domain-containing protein	Q6UAT8	Klebsiella_phage	1.5e-05	52.5
WP_004152526.1\|1373937_1374177_+	hypothetical protein	G8C7S3	Escherichia_phage	4.6e-10	48.0
WP_004152525.1\|1374176_1374515_+	hypothetical protein	A0A193GYX4	Enterobacter_phage	4.7e-45	80.0
WP_004178082.1\|1374611_1376099_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.2e-31	35.5
WP_004152524.1\|1376499_1376757_+	hypothetical protein	NA	NA	NA	NA
WP_004152523.1\|1376834_1377419_+\|terminase	terminase small subunit	T1SBI8	Salmonella_phage	2.4e-89	88.1
WP_020314691.1\|1377415_1378891_+	hypothetical protein	Q858H3	Salmonella_phage	3.2e-279	92.7
WP_004152473.1\|1378934_1379456_-	DUF2829 domain-containing protein	A0A1B0VMG3	Pseudomonas_phage	7.8e-47	55.2
WP_004152472.1\|1380161_1380365_+	hypothetical protein	NA	NA	NA	NA
WP_004152471.1\|1380368_1382048_+\|tail	tail protein	T1S9Z7	Salmonella_phage	3.4e-192	58.9
WP_004152470.1\|1382044_1382350_+	hypothetical protein	Q2A090	Sodalis_phage	1.1e-16	51.3
WP_019404949.1\|1382352_1383030_+	peptidase	T1SAP9	Salmonella_phage	2.0e-50	63.6
WP_004152467.1\|1383042_1384050_+\|capsid	phage capsid protein	T1S9H9	Salmonella_phage	2.7e-181	92.5
WP_004152466.1\|1384059_1384452_+	hypothetical protein	T1SA71	Salmonella_phage	1.5e-55	89.9
WP_004152465.1\|1384444_1384723_+	hypothetical protein	T1SA01	Salmonella_phage	6.7e-21	58.9
WP_004153043.1\|1384771_1385383_+	hypothetical protein	T1SAQ2	Salmonella_phage	1.2e-46	48.8
WP_004152463.1\|1385382_1387860_+	hypothetical protein	G9L6D0	Escherichia_phage	3.6e-267	56.5
WP_004152462.1\|1387861_1388332_+	hypothetical protein	Q858G2	Salmonella_phage	7.3e-44	55.3
WP_004152461.1\|1388324_1388822_+	hypothetical protein	A0A0F6TJ56	Escherichia_coli_O157_typing_phage	5.7e-23	40.5
WP_004243852.1\|1388834_1391579_+	hypothetical protein	A0A193GYI3	Enterobacter_phage	1.2e-93	39.2
WP_004152459.1\|1391578_1394968_+	hypothetical protein	G9L6D4	Escherichia_phage	6.3e-121	42.0
WP_004152458.1\|1394977_1395592_+	hypothetical protein	NA	NA	NA	NA
WP_004152457.1\|1395866_1396265_-	hypothetical protein	NA	NA	NA	NA
WP_004152456.1\|1396269_1396452_-	hypothetical protein	NA	NA	NA	NA
WP_004152455.1\|1396642_1397338_-	hypothetical protein	A0A193GYJ9	Enterobacter_phage	4.4e-61	52.7
WP_157833602.1\|1397421_1397610_-	ash family protein	NA	NA	NA	NA
WP_004152454.1\|1397718_1397916_-	type II toxin-antitoxin system HicA family toxin	A0A0M4RCZ9	Salmonella_phage	2.0e-19	69.8
WP_004152453.1\|1397919_1398177_-	DUF1902 domain-containing protein	A0A0M4R2Z9	Salmonella_phage	2.3e-12	54.1
WP_004152452.1\|1398267_1398564_-	hypothetical protein	T1SA06	Salmonella_phage	6.2e-25	65.5
WP_004221284.1\|1398715_1401085_+\|tail	phage tail fibers	A0A2H5BN49	Klebsiella_phage	9.1e-268	79.5
WP_004229092.1\|1401093_1401246_+	hypothetical protein	A0A2H5BN82	Klebsiella_phage	1.9e-06	54.3
WP_004146394.1\|1401369_1401774_+	membrane protein	T1SA79	Salmonella_phage	9.3e-56	84.1
WP_004146393.1\|1401760_1402066_+\|holin	phage holin family protein	A0A193GYK3	Enterobacter_phage	2.7e-39	82.4
WP_004152706.1\|1402055_1402685_+	glycoside hydrolase family 19 protein	Q858F0	Salmonella_phage	3.1e-90	76.4
WP_004152707.1\|1402681_1403164_+	DUF2514 domain-containing protein	Q858E9	Salmonella_phage	3.0e-61	80.6
WP_004152009.1\|1403383_1405252_-	sulfatase-like hydrolase/transferase	A0A2P0VMN7	Tetraselmis_virus	2.6e-07	22.6

DBSCAN-SWA_4

1733976 : 1740883

Planktothrix_phage(33.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004175147.1\|1733976_1734840_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	5.7e-10	27.5
WP_002912638.1\|1734850_1735624_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.5e-25	36.3
WP_004151134.1\|1735866_1736763_-	lipid kinase YegS	A0A1V0SBJ0	Catovirus	6.1e-15	29.8
WP_002912635.1\|1737005_1738367_-\|tRNA	tRNA 5-hydroxyuridine modification protein YegQ	Q6DW11	Phage_TP	2.5e-206	94.5
WP_002912634.1\|1738685_1739408_-	two-component system response regulator BaeR	W8CYM9	Bacillus_phage	6.4e-31	33.2
WP_004151135.1\|1739404_1740883_-	two-component system sensor histidine kinase BaeS	W8CYF6	Bacillus_phage	1.1e-29	28.3

DBSCAN-SWA_5

1777450 : 1785075

Enterobacteria_phage(28.57%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004152488.1\|1777450_1778857_+	NADP-dependent phosphogluconate dehydrogenase	M4QQM4	Ostreococcus_lucimarinus_virus	4.7e-38	28.7
WP_004152487.1\|1779081_1780146_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	3.4e-105	55.0
WP_004152486.1\|1780172_1781042_+	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	9.8e-111	67.0
WP_004152485.1\|1781073_1781964_+	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	2.8e-28	33.6
WP_004152484.1\|1781978_1782533_+	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A291LA62	Escherichia_phage	3.8e-52	58.2
WP_004152483.1\|1782713_1783880_+	UDP-glucose 6-dehydrogenase	M1I798	Paramecium_bursaria_Chlorella_virus	4.1e-112	54.7
WP_004152482.1\|1784073_1785075_+	NAD-dependent epimerase	E3T4Y8	Cafeteria_roenbergensis_virus	1.2e-30	28.6

DBSCAN-SWA_6

2025906 : 2082394

Staphylococcus_phage(16.67%)

transposase,plate,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002910830.1\|2025906_2026653_+\|protease	proteasome-type protease	NA	NA	NA	NA
WP_002910809.1\|2027091_2028078_+	fatty acid desaturase	NA	NA	NA	NA
WP_004151439.1\|2028070_2028871_+	PhnD/SsuA/transferrin family substrate-binding protein	NA	NA	NA	NA
WP_002910767.1\|2028857_2029031_-	hypothetical protein	NA	NA	NA	NA
WP_004219597.1\|2029328_2029472_-	hypothetical protein	NA	NA	NA	NA
WP_002910764.1\|2029648_2030590_+	transcriptional regulator TdcA	NA	NA	NA	NA
WP_002910762.1\|2030683_2031673_+	bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB	NA	NA	NA	NA
WP_004145486.1\|2031698_2033030_+	threonine/serine transporter TdcC	NA	NA	NA	NA
WP_002910759.1\|2033057_2034266_+	propionate kinase	NA	NA	NA	NA
WP_004152312.1\|2034294_2036589_+	formate C-acetyltransferase	A0A2P0VNR5	Tetraselmis_virus	2.3e-159	41.8
WP_004225356.1\|2036640_2036787_-	hypothetical protein	NA	NA	NA	NA
WP_002910729.1\|2037076_2038135_+	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_002910727.1\|2038244_2039159_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
WP_002910725.1\|2039168_2040446_+	high-affinity branched-chain amino acid ABC transporter permease LivM	NA	NA	NA	NA
WP_002910722.1\|2040442_2041318_+	ATP-binding cassette domain-containing protein	W8CYL7	Bacillus_phage	9.5e-05	41.5
WP_002910721.1\|2041314_2042034_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	2.5e-11	26.0
WP_002910720.1\|2042039_2042933_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_002910719.1\|2043216_2044860_+	phosphoenolpyruvate carboxykinase (ATP)	A0A2H4PQN1	Staphylococcus_phage	9.8e-136	50.4
WP_002910717.1\|2044909_2045386_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_002910715.1\|2045484_2046411_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_004152313.1\|2046714_2048010_+	MFS transporter	Q6JIH2	Burkholderia_virus	1.3e-61	36.8
WP_004899032.1\|2048021_2048831_+	substrate-binding domain-containing protein	NA	NA	NA	NA
WP_004152315.1\|2048805_2049705_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_002910657.1\|2049814_2050297_-	cold shock domain-containing protein	NA	NA	NA	NA
WP_002910654.1\|2050487_2051186_+	RluA family pseudouridine synthase	A0A2H4UV25	Bodo_saltans_virus	2.6e-05	27.2
WP_002910652.1\|2051211_2051751_-	DUF2058 domain-containing protein	NA	NA	NA	NA
WP_002910650.1\|2051865_2052195_-	gamma-glutamylcyclotransferase	NA	NA	NA	NA
WP_002910645.1\|2052763_2054104_+\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_004152316.1\|2054100_2054754_+	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_004152317.1\|2054757_2056455_+	OmpA family protein	NA	NA	NA	NA
WP_004152319.1\|2059418_2060774_+	S-type pyocin domain-containing protein	NA	NA	NA	NA
WP_002910593.1\|2060774_2061284_+	hypothetical protein	NA	NA	NA	NA
WP_002910591.1\|2061280_2061787_+	hypothetical protein	NA	NA	NA	NA
WP_002910589.1\|2061881_2062034_+	hypothetical protein	NA	NA	NA	NA
WP_002910586.1\|2062023_2062533_+	hypothetical protein	NA	NA	NA	NA
WP_022644641.1\|2064138_2065107_+\|transposase	IS5 family transposase	A0A1B0VFY5	Salmonella_phage	6.5e-180	96.3
WP_004199326.1\|2065248_2065431_+	hypothetical protein	NA	NA	NA	NA
WP_004153085.1\|2065427_2065757_+	hypothetical protein	NA	NA	NA	NA
WP_002910551.1\|2065753_2066260_+	hypothetical protein	NA	NA	NA	NA
WP_004227470.1\|2066641_2067730_+	hypothetical protein	NA	NA	NA	NA
WP_002910547.1\|2067776_2068082_+	hypothetical protein	NA	NA	NA	NA
WP_002910544.1\|2068103_2068997_+	SUMF1/EgtB/PvdO family nonheme iron enzyme	A0A7H6	Microcystis_virus	6.7e-14	30.5
WP_004217423.1\|2069042_2069159_+	hypothetical protein	NA	NA	NA	NA
WP_004152633.1\|2069180_2070074_+	SUMF1/EgtB/PvdO family nonheme iron enzyme	A0A075BSL8	Microcystis_phage	1.7e-12	27.3
WP_038435084.1\|2070099_2070228_+	hypothetical protein	NA	NA	NA	NA
WP_002910539.1\|2070249_2071143_+	SUMF1/EgtB/PvdO family nonheme iron enzyme	A0A075BSL8	Microcystis_phage	2.8e-12	27.1
WP_004152632.1\|2071318_2072209_+	SUMF1/EgtB/PvdO family nonheme iron enzyme	A0A7H6	Microcystis_virus	4.1e-11	29.8
WP_000019473.1\|2072545_2073526_+\|transposase	IS5-like element ISKpn26 family transposase	Q38213	Escherichia_phage	8.9e-185	99.1
WP_171815252.1\|2073583_2073886_+	hypothetical protein	NA	NA	NA	NA
WP_072093174.1\|2074146_2074332_+	hypothetical protein	NA	NA	NA	NA
WP_002910497.1\|2074629_2074896_+	PAAR domain-containing protein	NA	NA	NA	NA
WP_004198077.1\|2074899_2076057_+	hypothetical protein	NA	NA	NA	NA
WP_004152262.1\|2076040_2079451_+	type VI secretion protein VasK	NA	NA	NA	NA
WP_002910495.1\|2079584_2081348_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_004152910.1\|2081377_2082394_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA

DBSCAN-SWA_7

2751245 : 2762132

Escherichia_phage(87.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004151613.1\|2751245_2754353_+	beta-galactosidase	L0N6M2	Herpes_simplex_virus	0.0e+00	59.6
WP_004151612.1\|2754407_2755673_+	MFS transporter	NA	NA	NA	NA
WP_001620097.1\|2755703_2756792_-	AAA family ATPase	A0A077SLJ9	Escherichia_phage	8.0e-211	100.0
WP_002904006.1\|2756878_2757139_-	hypothetical protein	A0A077SK33	Escherichia_phage	3.5e-40	97.7
WP_004176269.1\|2757436_2758297_+	class A broad-spectrum beta-lactamase SHV-11	A0A077SL40	Escherichia_phage	2.2e-155	99.3
WP_002210513.1\|2758317_2759079_-	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	1.9e-134	100.0
WP_004151610.1\|2759339_2760242_+	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	7.7e-159	99.3
WP_004151609.1\|2760253_2761519_+	four-carbon acid sugar kinase family protein	A0A077SLJ7	Escherichia_phage	6.6e-233	99.5
WP_002210516.1\|2761511_2762132_+	aldolase	A0A077SK32	Escherichia_phage	8.0e-115	100.0

DBSCAN-SWA_8

2950827 : 3023630

uncultured_Caudovirales_phage(35.29%)

transposase,integrase,holin,terminase,plate

attL 3014743:3014757|attR 3020752:3020766

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002902268.1\|2950827_2951913_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_004151598.1\|2951876_2953631_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_004151599.1\|2955302_2958728_-	type VI secretion protein VasK	NA	NA	NA	NA
WP_002902254.1\|2958711_2959851_-	hypothetical protein	NA	NA	NA	NA
WP_002902252.1\|2959847_2960105_-	PAAR domain-containing protein	NA	NA	NA	NA
WP_004151601.1\|2960149_2962567_-	DUF2235 domain-containing protein	NA	NA	NA	NA
WP_002902180.1\|2962554_2963085_-	T6SS immunity phospholipase A1-binding lipoprotein Tli1-KP	NA	NA	NA	NA
WP_002902178.1\|2963152_2963683_-	T6SS immunity phospholipase A1-binding lipoprotein Tli1-KP	NA	NA	NA	NA
WP_002902176.1\|2963751_2964282_-	T6SS immunity phospholipase A1-binding lipoprotein Tli1-KP	NA	NA	NA	NA
WP_002902174.1\|2964349_2964880_-	T6SS immunity phospholipase A1-binding lipoprotein Tli1-KP	NA	NA	NA	NA
WP_002902172.1\|2964948_2965479_-	T6SS immunity phospholipase A1-binding lipoprotein Tli1-KP	NA	NA	NA	NA
WP_002902169.1\|2965542_2966322_-	DUF4123 domain-containing protein	NA	NA	NA	NA
WP_004228410.1\|2966322_2968692_-	type VI secretion system tip protein VgrG	A0A2H4JCD4	uncultured_Caudovirales_phage	9.1e-18	33.8
WP_002902163.1\|2968693_2971348_-	type VI secretion system ATPase TssH	K4FB40	Cronobacter_phage	2.5e-96	33.4
WP_002902160.1\|2971612_2972104_-	type VI secretion system effector Hcp	NA	NA	NA	NA
WP_004151602.1\|2972108_2973815_-	OmpA family protein	NA	NA	NA	NA
WP_004151603.1\|2973811_2974501_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_004218490.1\|2974497_2975841_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_002902148.1\|2975850_2977395_-	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_002902144.1\|2977437_2977929_-	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_002902136.1\|2978774_2979023_+	DinI-like family protein	S5MQI1	Escherichia_phage	1.4e-25	70.4
WP_002902133.1\|2979245_2979530_-	hypothetical protein	NA	NA	NA	NA
WP_002902131.1\|2979634_2979844_-	hypothetical protein	NA	NA	NA	NA
WP_002902128.1\|2979840_2980572_-	hypothetical protein	NA	NA	NA	NA
WP_004218487.1\|2980582_2981311_-	hypothetical protein	NA	NA	NA	NA
WP_004152577.1\|2983661_2983859_-	hypothetical protein	NA	NA	NA	NA
WP_004152576.1\|2983858_2984725_-	hypothetical protein	A0A2H4IYR0	uncultured_Caudovirales_phage	1.9e-34	64.5
WP_004152575.1\|2984724_2985498_-	DUF2612 domain-containing protein	A0A2H4J1A9	uncultured_Caudovirales_phage	2.8e-77	54.4
WP_004152574.1\|2985494_2986691_-\|plate	baseplate J/gp47 family protein	A0A0M4RD32	Salmonella_phage	3.9e-158	72.9
WP_004152573.1\|2986690_2987044_-	hypothetical protein	A0A2H4J629	uncultured_Caudovirales_phage	2.3e-50	80.3
WP_004152572.1\|2987045_2987699_-	hypothetical protein	A0A2H4J8H6	uncultured_Caudovirales_phage	1.0e-59	63.5
WP_004152571.1\|2987752_2988319_-	hypothetical protein	NA	NA	NA	NA
WP_004199301.1\|2988361_2988544_-	hypothetical protein	NA	NA	NA	NA
WP_004152570.1\|2988593_2988935_-	hypothetical protein	A0A2H4J1A5	uncultured_Caudovirales_phage	1.8e-23	46.6
WP_004152569.1\|2988934_2989957_-	hypothetical protein	A0A2H4J1B2	uncultured_Caudovirales_phage	9.2e-100	54.2
WP_004217362.1\|2989959_2990187_-	hypothetical protein	A0A2H4J495	uncultured_Caudovirales_phage	4.6e-20	56.0
WP_004152567.1\|2990262_2990862_-	hypothetical protein	A0A2H4J1B3	uncultured_Caudovirales_phage	9.9e-54	57.6
WP_004152566.1\|2990861_2992865_-	lytic transglycosylase domain-containing protein	A0A2H4J9N7	uncultured_Caudovirales_phage	1.2e-247	63.6
WP_004152565.1\|2992854_2993007_-	hypothetical protein	A0A2H4J1A2	uncultured_Caudovirales_phage	7.6e-19	88.0
WP_004152564.1\|2993042_2993468_-	hypothetical protein	A0A2H4J2V6	uncultured_Caudovirales_phage	2.6e-40	63.4
WP_085955245.1\|2993794_2994986_+\|transposase	IS3-like element ISKpn18 family transposase	U5P429	Shigella_phage	3.5e-50	43.5
WP_004152178.1\|2994927_2995218_-	DUF3277 family protein	A0A2H4J619	uncultured_Caudovirales_phage	2.6e-23	85.5
WP_004152177.1\|2995228_2996374_-	DUF3383 domain-containing protein	A0A2H4J8G4	uncultured_Caudovirales_phage	6.3e-166	76.9
WP_004152176.1\|2996377_2996818_-	hypothetical protein	A0A2H4J1A0	uncultured_Caudovirales_phage	1.6e-40	51.7
WP_001116156.1\|2996912_2997299_-	hypothetical protein	A0A2H4J1A4	uncultured_Caudovirales_phage	1.1e-48	78.2
WP_000834982.1\|2997298_2997805_-	hypothetical protein	NA	NA	NA	NA
WP_000113538.1\|2997801_2998221_-	DUF4054 domain-containing protein	A0A0M5M3S2	Salmonella_phage	3.3e-40	60.7
WP_000725700.1\|2998189_2998471_-	hypothetical protein	NA	NA	NA	NA
WP_001132269.1\|2998510_2999452_-	DUF2184 domain-containing protein	A0A2H4J191	uncultured_Caudovirales_phage	1.7e-137	77.1
WP_000528476.1\|2999463_2999958_-	hypothetical protein	A0A2H4JHM9	uncultured_Caudovirales_phage	4.2e-50	62.7
WP_004199270.1\|2999961_3001164_-	DUF2213 domain-containing protein	A0A0M4R5A6	Salmonella_phage	2.6e-106	54.1
WP_004152174.1\|3001215_3001764_-	hypothetical protein	A0A0M4REK0	Salmonella_phage	3.0e-49	56.3
WP_004152173.1\|3001819_3003271_-	DUF1073 domain-containing protein	A0A0M4S6U1	Salmonella_phage	3.8e-192	68.8
WP_004152172.1\|3003508_3004909_-\|terminase	PBSX family phage terminase large subunit	A0A077KAW0	Edwardsiella_phage	9.4e-188	69.0
WP_004218030.1\|3004859_3005348_-	hypothetical protein	NA	NA	NA	NA
WP_004152170.1\|3005713_3006034_-	hypothetical protein	NA	NA	NA	NA
WP_004153952.1\|3006268_3006658_-	lipase chaperone	A0A192Y6H8	Salmonella_phage	9.4e-21	49.2
WP_004152169.1\|3006654_3007185_-	lysozyme	K7PLY1	Enterobacteria_phage	2.7e-79	77.1
WP_004146526.1\|3007187_3007436_-\|holin	class II holin family protein	NA	NA	NA	NA
WP_004152167.1\|3007841_3008624_-	antitermination protein	F1C595	Cronobacter_phage	7.2e-113	76.8
WP_004198239.1\|3008620_3009097_-	hypothetical protein	A0A286N2Q1	Klebsiella_phage	1.8e-90	100.0
WP_004198233.1\|3009093_3010056_-	toprim domain-containing protein	A0A286N2Q0	Klebsiella_phage	4.8e-183	99.4
WP_004198228.1\|3010057_3011716_-	DEAD/DEAH box helicase	A0A286N2P9	Klebsiella_phage	0.0e+00	96.0
WP_004152162.1\|3012292_3012514_-	helix-turn-helix transcriptional regulator	A0A286S2C1	Klebsiella_phage	3.0e-32	100.0
WP_004152161.1\|3012611_3013280_+	LexA family transcriptional regulator	A0A286S2B2	Klebsiella_phage	2.4e-125	99.5
WP_004152160.1\|3013450_3013765_+	hypothetical protein	A0A286S1T9	Klebsiella_phage	1.0e-49	100.0
WP_004152159.1\|3013757_3013946_+	hypothetical protein	A0A286S1P8	Klebsiella_phage	4.6e-26	100.0
WP_004152158.1\|3014115_3014481_+	hypothetical protein	A0A286S1Q6	Klebsiella_phage	6.9e-58	99.2
WP_004152157.1\|3014473_3014728_+	hypothetical protein	A0A286SGR4	Klebsiella_phage	3.1e-41	97.6
WP_004177208.1\|3014699_3014918_+	hypothetical protein	A0A286S1P6	Klebsiella_phage	6.6e-32	98.6
3014743:3014757	attL	NA	NA	NA	NA
WP_004152156.1\|3014914_3015340_+	hypothetical protein	A0A286S1S2	Klebsiella_phage	3.5e-53	77.9
WP_004152155.1\|3015336_3015531_+	hypothetical protein	NA	NA	NA	NA
WP_004152154.1\|3015527_3016355_+	hypothetical protein	Q8W654	Enterobacteria_phage	5.5e-111	84.0
WP_004152153.1\|3016459_3016978_+	hypothetical protein	A0A286S1S7	Klebsiella_phage	1.7e-94	98.8
WP_004154298.1\|3016983_3017694_+	Rha family transcriptional regulator	A0A286S260	Klebsiella_phage	2.1e-111	88.3
WP_004152151.1\|3017683_3017908_+	hypothetical protein	A0A286S2B3	Klebsiella_phage	3.1e-29	89.2
WP_004152150.1\|3017904_3018117_+	hypothetical protein	A0A286S2B6	Klebsiella_phage	3.4e-33	98.6
WP_014343018.1\|3018359_3018593_+	hypothetical protein	NA	NA	NA	NA
WP_004198245.1\|3018665_3018812_+	hypothetical protein	A0A1B5FPC2	Escherichia_phage	2.9e-15	70.8
WP_004152148.1\|3018771_3019014_+	hypothetical protein	A0A0M4RTZ2	Salmonella_phage	2.2e-20	73.8
WP_004152147.1\|3018994_3020176_-\|integrase	site-specific integrase	A0A0M4QX09	Salmonella_phage	5.6e-202	84.2
WP_016197745.1\|3020372_3020921_+	DJ-1/PfpI family protein	NA	NA	NA	NA
3020752:3020766	attR	NA	NA	NA	NA
WP_004152145.1\|3021119_3022652_-	HD domain-containing protein	A0A1B1ISR1	uncultured_Mediterranean_phage	1.1e-21	30.0
WP_004152144.1\|3022868_3023630_-	SDR family oxidoreductase	Q06VL0	Trichoplusia_ni_ascovirus	2.4e-20	32.5

DBSCAN-SWA_9

3079940 : 3152030

Enterobacterial_phage(25.0%)

tail,protease,integrase,portal,holin,terminase

attL 3068547:3068562|attR 3153330:3153345

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3068547:3068562	attL	NA	NA	NA	NA
WP_002901758.1\|3079940_3080987_-\|protease	protease SohB	NA	NA	NA	NA
WP_004148112.1\|3081031_3081247_-	hypothetical protein	NA	NA	NA	NA
WP_002901754.1\|3081241_3082003_+	YciK family oxidoreductase	A0A0N9R355	Chrysochromulina_ericina_virus	1.6e-08	23.2
WP_002901749.1\|3081999_3082590_+	cob(I)yrinic acid a,c-diamide adenosyltransferase	NA	NA	NA	NA
WP_002901746.1\|3082649_3083552_-	23S rRNA pseudouridine(2605) synthase RluB	NA	NA	NA	NA
WP_004151909.1\|3083833_3084730_-	transcriptional regulator GcvA	NA	NA	NA	NA
WP_002901739.1\|3084841_3085750_+	EamA family transporter	NA	NA	NA	NA
WP_002901738.1\|3085771_3086392_-	threonylcarbamoyl-AMP synthase	NA	NA	NA	NA
WP_002901735.1\|3086408_3087272_-	5'-3' exoribonuclease	NA	NA	NA	NA
WP_004198226.1\|3087560_3089123_+	anthranilate synthase component 1	NA	NA	NA	NA
WP_004148109.1\|3089122_3090718_+	bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD	A0A0N7IRD9	Acinetobacter_phage	2.8e-47	36.5
WP_002901733.1\|3090721_3092080_+	bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF	A0A0P0IR83	Acinetobacter_phage	3.3e-36	40.4
WP_002901730.1\|3092089_3093283_+	tryptophan synthase subunit beta	NA	NA	NA	NA
WP_002901728.1\|3093282_3094092_+	tryptophan synthase subunit alpha	NA	NA	NA	NA
WP_002901726.1\|3094310_3095570_-	glycerate kinase	NA	NA	NA	NA
WP_002901724.1\|3095572_3096661_-	tartrate dehydrogenase	NA	NA	NA	NA
WP_002901722.1\|3096675_3097986_-	MFS transporter	NA	NA	NA	NA
WP_002901720.1\|3098114_3099023_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_002901718.1\|3099065_3099524_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_002901714.1\|3099598_3100546_+	zinc-binding alcohol dehydrogenase family protein	NA	NA	NA	NA
WP_004151911.1\|3100654_3100855_-	hypothetical protein	NA	NA	NA	NA
WP_004151912.1\|3100973_3101681_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_004151913.1\|3101990_3104276_+	catecholate siderophore receptor Fiu	NA	NA	NA	NA
WP_004151914.1\|3104324_3105002_+	PKHD-type hydroxylase YbiX	A0A127KM56	Cyanophage	3.3e-21	33.8
WP_020315055.1\|3105378_3106671_-\|tail	tail fiber domain-containing protein	A0A0P0IDN1	Klebsiella_phage	7.5e-208	89.3
WP_020317845.1\|3106703_3114908_-	DUF1983 domain-containing protein	A0A0P0IKE4	Klebsiella_phage	0.0e+00	69.4
WP_020315039.1\|3116871_3117462_-\|tail	tail assembly protein	K7PHE5	Enterobacteria_phage	4.7e-72	72.4
WP_020315033.1\|3117510_3117924_-	lipoprotein	G8C7Q7	Escherichia_phage	3.7e-52	65.7
WP_020315057.1\|3117966_3118677_-	C40 family peptidase	Q6UAW4	Klebsiella_phage	1.0e-137	91.5
WP_020315054.1\|3118678_3119434_-\|tail	phage minor tail protein L	Q6UAW5	Klebsiella_phage	2.5e-134	87.3
WP_020315047.1\|3119430_3119778_-\|tail	phage tail protein	K7PJT2	Enterobacteria_phage	5.4e-36	63.5
WP_020315061.1\|3119828_3122975_-\|tail	phage tail tape measure protein	E4WL33	Enterobacteria_phage	0.0e+00	71.6
WP_071599137.1\|3122958_3123273_-\|tail	phage tail assembly protein T	E4WL32	Enterobacteria_phage	1.7e-41	76.0
WP_020315038.1\|3123293_3123722_-\|tail	phage minor tail protein G	M9NZD7	Enterobacteria_phage	1.7e-36	60.7
WP_020315046.1\|3123732_3124476_-\|tail	phage tail protein	K7PKX6	Enterobacterial_phage	3.1e-113	84.2
WP_004122971.1\|3124484_3124886_-\|tail	tail protein	K7PHM6	Enterobacterial_phage	1.4e-56	77.1
WP_020315398.1\|3124882_3125461_-\|tail	phage tail protein	K7PMB7	Enterobacterial_phage	1.6e-77	79.7
WP_032422412.1\|3125464_3125740_-	DNA breaking-rejoining protein	K7PH55	Enterobacterial_phage	9.2e-23	66.2
WP_004122973.1\|3125732_3126059_-	DUF2190 family protein	K7PJY3	Enterobacterial_phage	1.6e-34	65.7
WP_020319759.1\|3126140_3128162_-\|protease	Clp protease ClpP	K7PKX4	Enterobacterial_phage	0.0e+00	82.3
WP_032422410.1\|3128112_3129615_-\|portal	phage portal protein	K7PHM5	Enterobacterial_phage	5.1e-248	83.8
WP_020315048.1\|3129614_3129827_-	hypothetical protein	A5LH28	Enterobacteria_phage	2.9e-24	80.0
WP_020315040.1\|3129823_3131926_-\|terminase	phage terminase large subunit family protein	K7PH52	Enterobacterial_phage	0.0e+00	84.1
WP_020315053.1\|3131925_3132414_-	DUF1441 family protein	K7PJY2	Enterobacterial_phage	7.8e-73	87.7
WP_020315023.1\|3132645_3132960_-	hypothetical protein	Q6UAS0	Klebsiella_phage	2.0e-29	63.8
WP_020315022.1\|3133064_3133373_-	hypothetical protein	NA	NA	NA	NA
WP_020315035.1\|3133454_3133931_-	DUF2514 domain-containing protein	NA	NA	NA	NA
WP_032425500.1\|3133963_3134494_-	lysozyme	G9L6J6	Escherichia_phage	1.8e-83	83.2
WP_004111739.1\|3134471_3134708_-\|holin	class II holin family protein	A5LH82	Enterobacteria_phage	4.0e-27	82.6
WP_071599135.1\|3135072_3135819_+	TIGR04255 family protein	NA	NA	NA	NA
WP_020315027.1\|3136008_3136188_+	hypothetical protein	NA	NA	NA	NA
WP_020315056.1\|3136191_3136809_+	hypothetical protein	A0A2D1GNI4	Pseudomonas_phage	1.4e-31	36.4
WP_020315059.1\|3136837_3137185_-	phage antitermination protein Q	A0A0P0ZCW0	Stx2-converting_phage	8.3e-53	83.2
WP_020315049.1\|3137197_3138229_-	DUF968 domain-containing protein	S5MW46	Escherichia_phage	2.4e-95	49.3
WP_020315031.1\|3138428_3138821_-	repressor LexA	K7PHB4	Enterobacterial_phage	4.7e-12	36.6
WP_071599138.1\|3138861_3139101_-	hypothetical protein	H6WRY6	Salmonella_phage	2.1e-15	57.1
WP_012542186.1\|3139163_3139397_-	DinI family protein	K7PM44	Enterobacteria_phage	1.7e-25	71.1
WP_004178082.1\|3139475_3140963_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.2e-31	35.5
WP_020315086.1\|3141718_3143506_+	DUF4209 domain-containing protein	Q2P9X5	Enterobacteria_phage	1.6e-14	23.6
WP_020318285.1\|3143714_3144152_-	hypothetical protein	NA	NA	NA	NA
WP_173399828.1\|3144165_3144837_-	replication protein	A0A0U2JGJ0	Escherichia_phage	2.2e-62	71.5
WP_014907826.1\|3145657_3146212_-	hypothetical protein	NA	NA	NA	NA
WP_012542199.1\|3146214_3146430_-	helix-turn-helix domain-containing protein	A0A0M4QX15	Salmonella_phage	2.0e-17	57.5
WP_012542200.1\|3146531_3146921_+	helix-turn-helix domain-containing protein	A0A0M4R5D1	Salmonella_phage	6.7e-35	60.2
WP_032425547.1\|3147763_3147958_+	DUF1482 family protein	NA	NA	NA	NA
WP_020315083.1\|3148000_3148345_+	Rrf2 family transcriptional regulator	NA	NA	NA	NA
WP_020315089.1\|3148486_3150625_+	exonuclease	S4TNL0	Salmonella_phage	1.9e-99	42.7
WP_071599122.1\|3150676_3150925_+	excisionase	NA	NA	NA	NA
WP_020315090.1\|3150902_3152030_+\|integrase	phage integrase Arm DNA-binding domain-containing protein	O21940	Phage_21	7.7e-108	54.9
3153330:3153345	attR	NA	NA	NA	NA

DBSCAN-SWA_10

3233700 : 3321019

Klebsiella_phage(48.78%)

head,tail,tRNA,integrase,portal,capsid,holin,terminase

attL 3260503:3260517|attR 3318830:3318844

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002901088.1\|3233700_3234201_+\|tRNA	YbaK/prolyl-tRNA synthetase associated domain-containing protein	NA	NA	NA	NA
WP_002901080.1\|3234317_3234764_+	DUF441 domain-containing protein	NA	NA	NA	NA
WP_004140469.1\|3234747_3235542_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_014343001.1\|3235649_3236825_+	CynX/NimT family MFS transporter	NA	NA	NA	NA
WP_004140471.1\|3236856_3237549_-	CTP synthase	NA	NA	NA	NA
WP_004150778.1\|3237694_3238204_+	DUF523 domain-containing protein	NA	NA	NA	NA
WP_014343000.1\|3238208_3238547_+	DUF488 family protein	NA	NA	NA	NA
WP_004150780.1\|3238536_3238776_-	DUF333 domain-containing protein	NA	NA	NA	NA
WP_004150781.1\|3239076_3240090_+	sensor domain-containing diguanylate cyclase	A0A127AWB9	Bacillus_phage	1.4e-12	29.0
WP_004150782.1\|3240147_3240249_+	YoaK family small membrane protein	NA	NA	NA	NA
WP_099119317.1\|3240248_3240323_+	protein YoaJ	NA	NA	NA	NA
WP_004140488.1\|3240440_3240566_+	hypothetical protein	NA	NA	NA	NA
WP_004140489.1\|3240625_3240889_-	DUF2534 family protein	NA	NA	NA	NA
WP_004150783.1\|3241019_3241658_-	leucine efflux protein LeuE	NA	NA	NA	NA
WP_004148038.1\|3241747_3242662_-	kdo(2)-lipid IV(A) palmitoleoyltransferase	A0A1W6JP29	Morganella_phage	1.1e-72	50.4
WP_004150784.1\|3243323_3244367_-	type II asparaginase	NA	NA	NA	NA
WP_004150785.1\|3244669_3245878_+	HD domain-containing protein	NA	NA	NA	NA
WP_004150787.1\|3245951_3247736_+	diguanylate cyclase	A0A127AWB9	Bacillus_phage	5.8e-17	36.1
WP_004150788.1\|3247742_3248633_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_004140497.1\|3248753_3250262_+	UbiD family decarboxylase	NA	NA	NA	NA
WP_004150789.1\|3250295_3250460_+	hypothetical protein	NA	NA	NA	NA
WP_004150790.1\|3250572_3251259_-	EAL domain-containing protein	NA	NA	NA	NA
WP_004140501.1\|3251656_3251836_-	hypothetical protein	NA	NA	NA	NA
WP_004150791.1\|3251875_3252508_-	DNA-binding protein	NA	NA	NA	NA
WP_004140506.1\|3253074_3253272_+	hypothetical protein	NA	NA	NA	NA
WP_004140509.1\|3253387_3254398_-	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA
WP_004150793.1\|3254394_3255801_-	cytochrome ubiquinol oxidase subunit I	NA	NA	NA	NA
WP_004140512.1\|3255856_3256744_-	manganese catalase family protein	NA	NA	NA	NA
WP_004140514.1\|3256760_3257267_-	ferritin-like domain-containing protein	NA	NA	NA	NA
WP_004150794.1\|3257293_3257788_-	ferritin-like domain-containing protein	NA	NA	NA	NA
WP_004150795.1\|3257878_3258064_-	general stress protein	NA	NA	NA	NA
WP_004140529.1\|3258685_3259879_+	glutathione-dependent formaldehyde dehydrogenase	NA	NA	NA	NA
WP_004140530.1\|3259991_3260219_+	DUF1272 domain-containing protein	NA	NA	NA	NA
WP_004225560.1\|3260360_3260537_+	hypothetical protein	NA	NA	NA	NA
3260503:3260517	attL	NA	NA	NA	NA
WP_004150797.1\|3260655_3260979_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
WP_004150798.1\|3260971_3261364_+	amino acid-binding protein	NA	NA	NA	NA
WP_004150799.1\|3261360_3262074_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_004892953.1\|3262346_3262499_-	isocitrate dehydrogenase	Q77Z09	Phage_21	3.8e-18	92.0
WP_020317728.1\|3263148_3263841_-	EAL domain-containing protein	NA	NA	NA	NA
WP_020317995.1\|3264200_3265259_-	sensor domain-containing diguanylate cyclase	A0A127AWB9	Bacillus_phage	1.6e-14	31.7
WP_020317726.1\|3265681_3267109_-\|tail	tail fiber domain-containing protein	A0A0P0IDN1	Klebsiella_phage	1.5e-100	55.2
WP_050893387.1\|3267177_3279882_-	DUF1983 domain-containing protein	Q6UAW1	Klebsiella_phage	0.0e+00	46.9
WP_014228919.1\|3279944_3280556_-\|tail	tail assembly protein	Q6UAW2	Klebsiella_phage	5.3e-71	72.5
WP_021462612.1\|3280571_3280922_-	hypothetical protein	NA	NA	NA	NA
WP_014228918.1\|3280953_3281664_-	C40 family peptidase	Q6UAW4	Klebsiella_phage	1.4e-136	89.8
WP_014907809.1\|3281665_3282421_-\|tail	phage minor tail protein L	Q6UAW5	Klebsiella_phage	1.2e-125	81.3
WP_014228916.1\|3282417_3282756_-\|tail	phage tail protein	Q6UAW6	Klebsiella_phage	8.3e-58	89.3
WP_032422481.1\|3282755_3286091_-\|tail	phage tail tape measure protein	Q6UAW7	Klebsiella_phage	0.0e+00	87.5
WP_014228914.1\|3286323_3286689_-\|tail	phage tail protein	Q6UAW8	Klebsiella_phage	1.6e-51	89.3
WP_014228913.1\|3286746_3287208_-\|tail	major tail shaft subunit	Q6UAX0	Klebsiella_phage	7.8e-67	83.7
WP_014228912.1\|3287239_3287632_-	HK97 gp10 family phage protein	Q6UAX1	Klebsiella_phage	3.5e-60	93.1
WP_014228911.1\|3287637_3288027_-	hypothetical protein	Q6UAX2	Klebsiella_phage	4.0e-56	84.5
WP_014228910.1\|3288007_3288346_-\|head,tail	head-tail adaptor protein	Q6UAX3	Klebsiella_phage	5.6e-54	91.1
WP_020317538.1\|3288342_3288660_-\|head,tail	phage gp6-like head-tail connector protein	Q6UAX4	Klebsiella_phage	1.5e-45	89.8
WP_014228908.1\|3288640_3288901_-	hypothetical protein	Q6UAX5	Klebsiella_phage	1.6e-21	60.5
WP_014228907.1\|3288959_3290246_-\|capsid	phage major capsid protein	Q6UAX6	Klebsiella_phage	4.4e-216	89.3
WP_014907815.1\|3290323_3291244_-	S49 family peptidase	Q6UAX7	Klebsiella_phage	9.6e-149	88.2
WP_023279520.1\|3291280_3292540_-\|portal	phage portal protein	Q6UAX8	Klebsiella_phage	1.8e-222	89.8
WP_020318187.1\|3292539_3292719_-	hypothetical protein	Q6UAX9	Klebsiella_phage	6.8e-11	57.9
WP_014228904.1\|3292712_3294434_-\|terminase	terminase large subunit	Q7Y413	Yersinia_phage	7.2e-190	57.2
WP_012542168.1\|3294433_3294868_-\|terminase	phage terminase small subunit P27 family	A0A1J0GV10	Halomonas_phage	9.4e-30	61.9
WP_014228903.1\|3295117_3295549_-	hypothetical protein	Q6UAS0	Klebsiella_phage	1.1e-41	62.0
WP_014228902.1\|3295545_3295863_-	hypothetical protein	NA	NA	NA	NA
WP_014228901.1\|3295814_3296177_-	HNH endonuclease	Q6UAS2	Klebsiella_phage	1.2e-57	83.3
WP_049800533.1\|3296402_3296879_-	DUF2514 domain-containing protein	NA	NA	NA	NA
WP_014228899.1\|3296911_3297442_-	lysozyme	G9L6J6	Escherichia_phage	6.2e-84	83.2
WP_014228898.1\|3297419_3297656_-\|holin	class II holin family protein	A5LH82	Enterobacteria_phage	3.1e-27	82.6
WP_020318001.1\|3298957_3299401_+	hypothetical protein	NA	NA	NA	NA
WP_020317678.1\|3299402_3300272_+	hypothetical protein	NA	NA	NA	NA
WP_014228895.1\|3300300_3300645_-	antitermination protein	A0A0P0ZCW0	Stx2-converting_phage	1.0e-55	85.0
WP_050893388.1\|3300657_3301689_-	DUF968 domain-containing protein	S5MW46	Escherichia_phage	2.4e-95	49.0
WP_041165280.1\|3301888_3302281_-	DNA-binding protein	K7PHB4	Enterobacterial_phage	3.6e-12	36.6
WP_071845804.1\|3302321_3302561_-	hypothetical protein	H6WRY6	Salmonella_phage	1.9e-16	58.6
WP_014228891.1\|3302623_3302857_-	DinI-like family protein	K7PM44	Enterobacteria_phage	2.4e-24	69.7
WP_004178082.1\|3302935_3304423_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.2e-31	35.5
WP_050583672.1\|3305421_3306783_+	hypothetical protein	NA	NA	NA	NA
WP_014229941.1\|3307064_3307637_-	flavin reductase family protein	NA	NA	NA	NA
WP_020317772.1\|3307766_3308666_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_014228888.1\|3308787_3309228_-	hypothetical protein	NA	NA	NA	NA
WP_165858073.1\|3309241_3309913_-	replication protein	A0A0U2JGJ0	Escherichia_phage	2.4e-64	71.9
WP_014228885.1\|3310762_3311317_-	hypothetical protein	NA	NA	NA	NA
WP_014228884.1\|3311322_3311544_-	helix-turn-helix transcriptional regulator	A0A077K9X2	Edwardsiella_phage	3.8e-11	55.2
WP_014228883.1\|3311645_3312029_+	helix-turn-helix domain-containing protein	K7PH19	Enterobacteria_phage	5.1e-19	63.5
WP_016160636.1\|3312854_3313049_+	DUF1482 family protein	NA	NA	NA	NA
WP_014228879.1\|3313091_3313436_+	Rrf2 family transcriptional regulator	NA	NA	NA	NA
WP_050893389.1\|3313577_3315716_+	exonuclease	S4TNL0	Salmonella_phage	1.5e-99	42.9
WP_012542206.1\|3315768_3316014_+	excisionase	NA	NA	NA	NA
WP_014228877.1\|3315994_3317122_+\|integrase	phage integrase Arm DNA-binding domain-containing protein	O21925	Phage_21	3.3e-119	58.4
WP_004150800.1\|3317239_3318490_-	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	1.1e-19	92.6
WP_004150801.1\|3318730_3319381_+	23S rRNA pseudouridine(2457) synthase RluE	NA	NA	NA	NA
3318830:3318844	attR	NA	NA	NA	NA
WP_004150802.1\|3319397_3319856_+	NUDIX hydrolase	NA	NA	NA	NA
WP_004150803.1\|3319912_3321019_+\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA

DBSCAN-SWA_11

3537215 : 3630166

Salmonella_phage(58.62%)

head,tail,protease,tRNA,integrase,portal,capsid,lysis,terminase,plate

attL 3592741:3592759|attR 3630241:3630259

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002898139.1\|3537215_3538508_-\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	7.3e-94	44.7
WP_002898137.1\|3538598_3539942_-	replication-associated recombination protein RarA	G3MBE0	Bacillus_virus	7.3e-81	40.8
WP_002898132.1\|3539950_3540562_-	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA
WP_004150846.1\|3540684_3544938_-	DNA translocase FtsK	S5VNE3	Mycobacterium_phage	5.2e-88	49.2
WP_020314624.1\|3545073_3545568_-	leucine-responsive transcriptional regulator Lrp	NA	NA	NA	NA
WP_002898019.1\|3546100_3547069_+	thioredoxin-disulfide reductase	A0A2I2L5E1	Orpheovirus	3.2e-62	44.0
WP_002898017.1\|3547183_3548950_+	cysteine/glutathione ABC transporter permease/ATP-binding protein CydD	W8CYL7	Bacillus_phage	2.3e-21	25.9
WP_004150847.1\|3548950_3550672_+	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	A0A2R8FG22	Brazilian_cedratvirus	1.5e-14	34.3
WP_002898014.1\|3550716_3551418_+\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
WP_001040187.1\|3551771_3551990_+	translation initiation factor IF-1	NA	NA	NA	NA
WP_002896522.1\|3552110_3554390_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	1.6e-165	42.0
WP_002896520.1\|3554420_3554738_-\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	2.0e-13	45.7
WP_002896516.1\|3555063_3555285_+	cold shock-like protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	1.3e-16	61.2
WP_004150848.1\|3555361_3557302_-	macrolide ABC transporter ATP-binding protein/permease MacB	G9BWD6	Planktothrix_phage	1.9e-37	40.5
WP_002896440.1\|3557298_3558414_-	macrolide transporter subunit MacA	A0A140XAI1	Dickeya_phage	1.3e-06	52.7
WP_002896437.1\|3558560_3560219_-	ATP-dependent endonuclease	NA	NA	NA	NA
WP_002896434.1\|3560638_3561334_+	aquaporin Z	NA	NA	NA	NA
WP_004147773.1\|3561449_3562349_+	lysine exporter LysO family protein	NA	NA	NA	NA
WP_002896412.1\|3562492_3564145_+	hydroxylamine reductase	NA	NA	NA	NA
WP_002896410.1\|3564155_3565124_+	NADH oxidoreductase	NA	NA	NA	NA
WP_002896408.1\|3565335_3565770_-	DoxX family protein	NA	NA	NA	NA
WP_002896406.1\|3565921_3567640_+	ubiquinone-dependent pyruvate dehydrogenase	NA	NA	NA	NA
WP_002896404.1\|3567678_3568680_+	low-specificity L-threonine aldolase	NA	NA	NA	NA
WP_002896401.1\|3568690_3570133_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_002896399.1\|3570220_3571234_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_002896397.1\|3571230_3572061_-	N-acetylmuramoyl-L-alanine amidase	A0A1B0UZW5	Roseobacter_phage	4.1e-05	31.6
WP_004150851.1\|3572092_3573232_-	GGDEF domain-containing protein	NA	NA	NA	NA
WP_002896394.1\|3574109_3574625_+	lipoprotein	NA	NA	NA	NA
WP_002896392.1\|3574851_3575580_+	arginine ABC transporter ATP-binding protein ArtP	G9BWD6	Planktothrix_phage	1.2e-29	37.1
WP_002896390.1\|3575600_3576332_+	arginine ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_002896386.1\|3576338_3577055_+	arginine ABC transporter permease ArtQ	NA	NA	NA	NA
WP_004150852.1\|3577054_3577723_+	arginine ABC transporter permease ArtM	NA	NA	NA	NA
WP_002896384.1\|3577906_3578638_+	ABC transporter substrate-binding protein ArtJ	NA	NA	NA	NA
WP_002896382.1\|3578680_3580153_-	two-component sensor histidine kinase	W8CYF6	Bacillus_phage	7.9e-28	31.8
WP_002896380.1\|3580149_3580866_-	response regulator transcription factor	W8CYM9	Bacillus_phage	2.1e-34	36.9
WP_002896378.1\|3580944_3582072_-	23S rRNA (uracil(747)-C(5))-methyltransferase RlmC	A0A2K5B251	Erysipelothrix_phage	1.3e-19	25.6
WP_002896376.1\|3582113_3582602_-	DUF2593 family protein	NA	NA	NA	NA
WP_002896372.1\|3582659_3583505_-	putrescine ABC transporter permease PotI	NA	NA	NA	NA
WP_002896371.1\|3583501_3584455_-	putrescine ABC transporter permease PotH	NA	NA	NA	NA
WP_002896370.1\|3584465_3585599_-	putrescine ABC transporter ATP-binding subunit PotG	G3M9Y6	Bacillus_virus	2.2e-30	34.9
WP_002896368.1\|3585762_3586875_-	spermidine/putrescine ABC transporter substrate-binding protein PotF	NA	NA	NA	NA
WP_002896365.1\|3587223_3587703_-	YbjN domain-containing protein	NA	NA	NA	NA
WP_002896363.1\|3587791_3588694_-	30S ribosomal protein S6--L-glutamate ligase	A0A1D7SR78	Cyanophage	2.0e-34	35.3
WP_002896354.1\|3589515_3589803_-	YbjC family protein	NA	NA	NA	NA
WP_002896352.1\|3590005_3590269_+	GrxA family glutaredoxin	A0A2I7SAE2	Vibrio_phage	1.6e-27	73.1
WP_002896351.1\|3590275_3590659_-	inner membrane protein YbjM	NA	NA	NA	NA
WP_004179131.1\|3590925_3592611_+	aspartate:alanine antiporter	NA	NA	NA	NA
3592741:3592759	attL	NA	NA	NA	NA
WP_000972391.1\|3592830_3593049_-	ogr/Delta-like zinc finger family protein	Q53ZE7	Salmonella_virus	7.5e-20	69.0
WP_002896225.1\|3593140_3594241_-	phage late control D family protein	A0A1S6KZZ5	Salmonella_phage	4.9e-176	87.4
WP_002896224.1\|3594237_3594723_-\|tail	phage tail protein	E5G6Q2	Salmonella_phage	7.2e-63	75.6
WP_002896222.1\|3594719_3597347_-\|tail	phage tail tape measure protein	E5FFG5	Burkholderia_phage	5.6e-117	42.0
WP_002896220.1\|3597339_3597459_-\|tail	GpE family phage tail protein	E5G6Q0	Salmonella_phage	2.2e-13	87.2
WP_002896204.1\|3597473_3597773_-\|tail	phage tail assembly protein	E5G6P9	Salmonella_phage	3.7e-33	79.0
WP_002896201.1\|3597825_3598341_-\|tail	phage major tail tube protein	E5G6P8	Salmonella_phage	1.3e-81	85.4
WP_002896193.1\|3598350_3599523_-\|tail	phage tail sheath protein	A0A1S6KZY7	Salmonella_phage	1.9e-210	93.3
WP_002896191.1\|3599661_3600738_-\|tail	phage tail protein	Q37842	Escherichia_phage	1.2e-25	44.8
WP_002896188.1\|3600767_3600971_-	hypothetical protein	NA	NA	NA	NA
WP_002896186.1\|3600967_3601699_-	hypothetical protein	NA	NA	NA	NA
WP_019724930.1\|3601702_3602437_-	hypothetical protein	NA	NA	NA	NA
WP_004150856.1\|3604655_3605255_-\|tail	phage tail protein I	A0A1S6L000	Salmonella_phage	1.3e-58	60.5
WP_002896182.1\|3605247_3606156_-\|plate	baseplate assembly protein	E5G6N8	Salmonella_phage	7.6e-106	66.9
WP_002896179.1\|3606142_3606505_-	GPW/gp25 family protein	A0A1S6KZZ4	Salmonella_phage	5.8e-49	84.7
WP_002896177.1\|3606501_3607074_-\|plate	phage baseplate assembly protein V	E5G6N6	Salmonella_phage	4.7e-77	72.3
WP_004150857.1\|3607168_3607861_+	hypothetical protein	NA	NA	NA	NA
WP_002896175.1\|3607857_3608304_-	phage virion morphogenesis protein	A0A1S6L001	Salmonella_phage	2.2e-50	71.2
WP_002896172.1\|3608296_3608728_-\|tail	phage tail protein	A0A1S6KZY0	Salmonella_phage	9.9e-64	82.5
WP_002896170.1\|3608690_3608837_-	hypothetical protein	A0A1S6KZX6	Salmonella_phage	6.0e-13	76.1
WP_002896168.1\|3608823_3609252_-\|lysis	LysB family phage lysis regulatory protein	A0A1S6KZX8	Salmonella_phage	9.6e-51	77.9
WP_002896163.1\|3609248_3609632_-	hypothetical protein	A0A1S6KZZ2	Salmonella_phage	2.1e-17	42.0
WP_002896161.1\|3609636_3610146_-	lysozyme	E5G6N1	Salmonella_phage	2.1e-81	83.4
WP_002896158.1\|3610126_3610342_-	hypothetical protein	E5G6N0	Salmonella_phage	3.6e-30	90.1
WP_002896155.1\|3610345_3610549_-\|tail	tail protein X	A0A1S6KZY4	Salmonella_phage	1.3e-29	88.1
WP_002896151.1\|3610548_3611013_-\|head	head completion/stabilization protein	A0A1S6KZW8	Salmonella_phage	8.4e-77	89.0
WP_000059191.1\|3611108_3611759_-\|terminase	terminase endonuclease subunit	E5G6M7	Salmonella_phage	8.7e-112	96.3
WP_002895972.1\|3611762_3612821_-\|capsid	phage major capsid protein, P2 family	E5G6M6	Salmonella_phage	1.1e-180	93.1
WP_002895967.1\|3612837_3613671_-\|capsid	GPO family capsid scaffolding protein	A0A1S6KZW9	Salmonella_phage	6.3e-123	88.8
WP_004150858.1\|3613813_3615580_+\|terminase	terminase ATPase subunit family protein	A0A1S6KZW3	Salmonella_phage	0.0e+00	99.0
WP_002895959.1\|3615579_3616605_+\|portal	phage portal protein	A0A1S6KZW5	Salmonella_phage	7.6e-171	86.7
WP_004199124.1\|3616666_3618409_-	AIPR family protein	NA	NA	NA	NA
WP_000700647.1\|3618684_3619362_-	hypothetical protein	NA	NA	NA	NA
WP_001217575.1\|3619476_3619710_-	DinI family protein	E5G6M1	Salmonella_phage	4.7e-36	100.0
WP_001154434.1\|3619720_3619909_-	hypothetical protein	E5G6M0	Salmonella_phage	5.5e-27	98.4
WP_004150862.1\|3620062_3622477_-	replication endonuclease	E5G6L9	Salmonella_phage	0.0e+00	97.5
WP_004150863.1\|3622473_3623331_-	DNA adenine methylase	E5G6L8	Salmonella_phage	2.0e-156	95.4
WP_000752622.1\|3623327_3623555_-	TraR/DksA family transcriptional regulator	E5G6L7	Salmonella_phage	6.0e-36	98.7
WP_004150864.1\|3623554_3623788_-	DUF2732 family protein	E5G6L6	Salmonella_phage	4.1e-32	96.1
WP_000963473.1\|3623855_3624197_-	DUF5347 domain-containing protein	E5G6L5	Salmonella_phage	4.6e-56	99.1
WP_000956179.1\|3624160_3624361_-	DUF2724 domain-containing protein	E5G6L4	Salmonella_phage	1.6e-32	97.0
WP_000460893.1\|3624368_3624878_-	phage regulatory CII family protein	E5G6L3	Salmonella_phage	5.8e-87	98.8
WP_000188448.1\|3624910_3625132_-	hypothetical protein	NA	NA	NA	NA
WP_004152885.1\|3625277_3626156_+	phage repressor protein CI	A0A1S6KZZ7	Salmonella_phage	1.7e-30	39.9
WP_004150866.1\|3626167_3627112_+	hypothetical protein	NA	NA	NA	NA
WP_004178082.1\|3627210_3628698_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.2e-31	35.5
WP_014342959.1\|3629185_3630166_+\|integrase	tyrosine-type recombinase/integrase	A0A218M4I3	Erwinia_phage	1.4e-97	57.2
3630241:3630259	attR	NA	NA	NA	NA

DBSCAN-SWA_12

4283512 : 4295166

Enterobacteria_phage(70.0%)

integrase

attL 4283962:4283976|attR 4307019:4307033

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004144574.1\|4283512_4284616_+	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	4.8e-62	40.5
4283962:4283976	attL	NA	NA	NA	NA
WP_002889940.1\|4284626_4285880_+	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	8.9e-89	44.9
WP_002889938.1\|4286232_4287423_+\|integrase	tyrosine-type recombinase/integrase	Q7M297	Enterobacteria_phage	6.4e-145	62.7
WP_004152029.1\|4287410_4288361_+	AAA family ATPase	A0A1X9IGI7	Lactococcus_phage	1.2e-13	27.1
WP_004152979.1\|4288360_4288786_+	hypothetical protein	NA	NA	NA	NA
WP_002889930.1\|4289354_4289921_-	phage polarity suppression protein	Q7M2A1	Enterobacteria_phage	1.5e-59	64.3
WP_002889919.1\|4289938_4290184_-	ogr/Delta-like zinc finger family protein	Q7M294	Enterobacteria_phage	1.9e-19	58.0
WP_002889917.1\|4290180_4290918_-	hypothetical protein	Q7M2A2	Enterobacteria_phage	9.0e-73	60.7
WP_002889915.1\|4291459_4291726_+	AlpA family transcriptional regulator	Q7M299	Enterobacteria_phage	2.6e-30	71.6
WP_024940872.1\|4291722_4292280_+	ash family protein	Q7M2A7	Enterobacteria_phage	1.8e-33	70.4
WP_002889911.1\|4292276_4292504_+	hypothetical protein	NA	NA	NA	NA
WP_002889897.1\|4292500_4292821_+	DUF5375 domain-containing protein	NA	NA	NA	NA
WP_002889890.1\|4292832_4295166_+	toprim domain-containing protein	Q7M2A8	Enterobacteria_phage	0.0e+00	82.2
4307019:4307033	attR	NA	NA	NA	NA

DBSCAN-SWA_13

4763412 : 4769237

Enterobacteria_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004152207.1\|4763412_4765746_-	toprim domain-containing protein	Q7M2A8	Enterobacteria_phage	0.0e+00	83.9
WP_004152206.1\|4765760_4766081_-	DUF5375 domain-containing protein	NA	NA	NA	NA
WP_004152205.1\|4766077_4766305_-	hypothetical protein	NA	NA	NA	NA
WP_004153681.1\|4766301_4766850_-	host cell division inhibitor Icd-like protein	Q7M2A7	Enterobacteria_phage	1.1e-30	69.4
WP_000556592.1\|4766846_4767113_-	AlpA family transcriptional regulator	Q7M299	Enterobacteria_phage	2.0e-30	71.6
WP_004152204.1\|4767673_4768411_+	hypothetical protein	Q7M2A2	Enterobacteria_phage	1.1e-70	59.4
WP_004152203.1\|4768407_4768653_+	ogr/Delta-like zinc finger family protein	Q7M294	Enterobacteria_phage	5.5e-19	56.8
WP_004152202.1\|4768670_4769237_+	phage polarity suppression protein	Q7M2A1	Enterobacteria_phage	9.7e-59	63.8

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP011977

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP011976

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection