CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
NC_021668	Psychrobacter sp. G plasmid PsyG_26, complete sequence	0 crisprs	NA	0	3
NC_021669	Psychrobacter sp. G plasmid PsyG_3, complete sequence	1 crisprs	NA	1	0
NC_021662	Psychrobacter sp. G plasmid PsyG_4, complete sequence	0 crisprs	NA	0	0
NC_021661	Psychrobacter sp. G, complete sequence	2 crisprs	c2c9_V-U4,DEDDh,WYL,csa3,cas1,cas3f,cas8f,cas5f,cas7f,cas6f,RT,cas3	3	3

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 1863

Bacillus_phage(100.0%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011959972.1\|399_1863_+	histidine kinase	W8CYF6	Bacillus_phage	4.6e-12	27.2

DBSCAN-SWA_2

10095 : 15690

Stenotrophomonas_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_020444575.1\|10095_11088_+	DUF932 domain-containing protein	A0A0H4INH5	Stenotrophomonas_phage	2.1e-56	38.1
WP_020444576.1\|11204_12272_+	YqaJ viral recombinase family protein	A0A139ZPJ9	Marinitoga_camini_virus	1.4e-45	37.3
WP_020444577.1\|12395_13307_+	hypothetical protein	NA	NA	NA	NA
WP_020444578.1\|13590_14097_+	hypothetical protein	NA	NA	NA	NA
WP_020444579.1\|14235_14706_-	hypothetical protein	NA	NA	NA	NA
WP_020444580.1\|14760_15690_-	replication initiation protein	A0A222YYK1	Escherichia_phage	1.3e-07	24.1

DBSCAN-SWA_3

21237 : 22248

Thermus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_020444586.1\|21237_22248_-	DNA cytosine methyltransferase	A7XXH6	Thermus_virus	2.3e-55	37.3

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NC_021669

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CRISPR-Cas detection and classification

Crispr_ID: NC_021669_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_021669_1

2542-2633

Orphan

Consensus_repeat	Method
GTGGGAAGAAACTAGCATTAAGTGGGAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_021669_1

>merge|NC_021669|1|2542-2633|CRISPRCasFinder
GTGGGAAGAAACTAGCATTAAGTGGGAAGAAACTAGCATTGAAGTGGGAAGAAACTAGCATTAAGTGGGAAGAAACTAGCATTAAGTGGGAA

>NC_021669|1|1|2542-2633|CRISPRCasFinder
GTGGGAAGAAACTAGCATTAAGTGGGAA	GAAACTAGCATTGAAGTGGGAAGAAACTAGCATTAA
GTGGGAAGAAACTAGCATTAAGTGGGAA

>NC_021669.1|WP_020444565.1|1517_2486_-|replication-initiation-protein
MTDNIELYEKKYPEKWIVMQNTITQAFRDMSIDEKRLIILASTLVRLTEATEQKPIEVLASEFHKFSGVDEKSAYKQMKLASKKLMKRSFVYDDKNGVETEVQWVIRSKYNDGFVTIFFTNEVIQLLKVFDSVNPYTKYLKDDVLALRLTYSIDLYHLAKKYQGMGGFKISLDDYRKELGTPKSYNRINNLKDNAVDPVIKEINDKTDLNISYENIKRGKEVTGLKFTVKSKPKPKIKDVKAVEVDKYSVDKLNDKQLEAIVCTEAFKADYNHMISATSPINTDWTLWQPEMVKRLKANPEKFIKRSMQFYLSQISKYKNKA
>NC_021669.1|WP_020444564.1|1245_1440_-|hypothetical-protein
MNINPKNLTPTAQLIIEVYQEAGYDAAYIHNKADRLRGMTERQVFSFALTSLDSTNLEKLKYKL
>NC_021669.1|WP_020444563.1|1066_1237_-|ribbon-helix-helix-protein,-CopG-family
MSEKSSTDEKTVTLKVDRALADAFKRAAKANNRSQSLLIRDFMADYVKKNGQIKLL
>NC_021669.1|WP_144061813.1|2766_3192_-|hypothetical-protein
MANRSENMKLVNKIRSAEVTAMLDLLRDLDNGTGGDFGGFIQFGINNDHDMKGRINSYRAQKIAKYLGKNLSKSHLIRFSKDKNILIERDSYVYSKGDISIDRISVDKFIEIDGKGLLLYWTYSKGFYINNALIELDRSHS
>NC_021669.1|WP_020444567.1|3572_3899_+|plasmid-mobilization-relaxosome-protein-MobC
MPIIKGEKRELSIKIRVTQDEKDTLNELKTQDELASWMRELALNQNPIKRADPDLVRAIGRFGSNLNQIAKHANTKKELDTNVLSAINRIEFMLIDVIDQHKDDKDAS

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Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NC_021669_1	1.1\|2570\|36\|NC_021669\|CRISPRCasFinder	2570-2605	36	NC_021669	Psychrobacter sp. G plasmid PsyG_3, complete sequence	2570-2605	0	1.0

1. spacer 1.1|2570|36|NC_021669|CRISPRCasFinder matches to NC_021669 (Psychrobacter sp. G plasmid PsyG_3, complete sequence) position: , mismatch: 0, identity: 1.0

gaaactagcattgaagtgggaagaaactagcattaa	CRISPR spacer
gaaactagcattgaagtgggaagaaactagcattaa	Protospacer
************************************

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NC_021661

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CRISPR-Cas detection and classification

Crispr_ID: NC_021661_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_021661_1

1340645-1340744

Orphan

Consensus_repeat	Method
AAGCGTCATTTATCGTCGCAATTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_021661_1

>merge|NC_021661|1|1340645-1340744|CRISPRCasFinder
TAGCGTCATTTACAGTCGCAATTTGGAAGCGTCATTTATCGTCGCAATTTAGGTGTATTTTTTATGTTTGAGTTAAAAGCGGCATTTATCGTCGCAATTT

>NC_021661|1|1|1340645-1340744|CRISPRCasFinder
TAGCGTCATTTACAGTCGCAATTT	GGAAGCGTCATTTATCGTCGCAATTTAGGTGTATTTTTTATGTTTGAGTTAA
AAGCGGCATTTATCGTCGCAATTT

Protein	Signature genes	Signature genes Name	Protein_function
NC_021661.1\|WP_020443336.1\|1337998_1339006_-\|TonB-C-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|274303
NC_021661.1\|WP_020443339.1\|1339568_1340300_-\|protein-TolQ	unknown	unknown	gnl\|CDD\|131843
NC_021661.1\|WP_020443335.1\|1335807_1336452_+\|cytochrome-c	unknown	unknown	gnl\|CDD\|224921
NC_021661.1\|WP_011513469.1\|1336569_1337862_-\|PD40-domain-containing-protein	unknown	unknown	gnl\|CDD\|274305
NC_021661.1\|WP_020443349.1\|1356423_1357815_-\|adenylosuccinate-lyase	unknown	unknown	gnl\|CDD\|236452
NC_021661.1\|WP_020443334.1\|1332508_1333963_+\|c-type-cytochrome	unknown	unknown	gnl\|CDD\|224921
NC_021661.1\|WP_020443344.1\|1347599_1349258_+\|FAD-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|274365
NC_021661.1\|WP_020443348.1\|1354803_1355976_-\|cupin-domain-containing-protein	unknown	unknown	gnl\|CDD\|225406
NC_021661.1\|WP_020443345.1\|1349422_1351993_+\|xanthine-dehydrogenase-molybdopterin-binding-subunit	unknown	unknown	gnl\|CDD\|274367
NC_021661.1\|WP_020443343.1\|1346137_1346827_+\|1-pyrroline-5-carboxylate-dehydrogenase	unknown	unknown	gnl\|CDD\|237018
NC_021661.1\|WP_020443342.1\|1342868_1346126_+\|bifunctional-proline-dehydrogenase/L-glutamate-gamma-semialdehyde-dehydrogenase-PutA	unknown	unknown	gnl\|CDD\|237017
NC_021661.1\|WP_011513481.1\|1356107_1356293_+\|NF038104-family-lipoprotein	unknown	unknown	unknown
NC_021661.1\|WP_020443338.1\|1339113_1339572_-\|protein-TolR	unknown	unknown	gnl\|CDD\|274306
NC_021661.1\|WP_144061755.1\|1351985_1352972_+\|xanthine-dehydrogenase-accessory-protein-XdhC	unknown	unknown	gnl\|CDD\|274366
NC_021661.1\|WP_020443341.1\|1340811_1342107_+\|NCS2-family-permease	unknown	unknown	gnl\|CDD\|225161
NC_021661.1\|WP_020443331.1\|1329812_1330778_+\|laccase-domain-containing-protein	unknown	unknown	gnl\|CDD\|376831
NC_021661.1\|WP_187289135.1\|1331111_1331663_+\|flavodoxin-family-protein	unknown	unknown	gnl\|CDD\|223728
NC_021661.1\|WP_144061795.1\|1353356_1354643_+\|guanine-deaminase	unknown	unknown	gnl\|CDD\|236419
NC_021661.1\|WP_011513467.1\|1334161_1335763_+\|flavin-monoamine-oxidase-family-protein	unknown	unknown	gnl\|CDD\|224152
NC_021661.1\|WP_020443333.1\|1331755_1331926_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NC_021661.1\|WP_020443336.1\|1337998_1339006_-\|TonB-C-terminal-domain-containing-protein	gnl\|CDD\|274303	TIGR02794, Protein_TolA, TolA protein. TolA couples the inner membrane complex of itself with TolQ and TolR to the outer membrane complex of TolB and OprL (also called Pal). Most of the length of the protein consists of low-complexity sequence that may differ in both length and composition from one species to another, complicating efforts to discriminate TolA (the most divergent gene in the tol-pal system) from paralogs such as TonB. Selection of members of the seed alignment and criteria for setting scoring cutoffs are based largely conserved operon struction. //The Tol-Pal complex is required for maintaining outer membrane integrity. Also involved in transport (uptake) of colicins and filamentous DNA, and implicated in pathogenesis. Transport is energized by the proton motive force. TolA is an inner membrane protein that interacts with periplasmic TolB and with outer membrane porins ompC, phoE and lamB. [Transport and binding proteins, Other, Cellular processes, Pathogenesis].	3.40217e-06
NC_021661.1\|WP_020443339.1\|1339568_1340300_-\|protein-TolQ	gnl\|CDD\|131843	TIGR02796, Protein_TolQ, TolQ protein. TolQ is one of the essential components of the Tol-Pal system. Together with TolR, it harnesses protonmotive force to energize TolA, which spans the periplasm to reach the complex of TolB and Pal at the outer member. The tol-pal system proves to be important for maintaining outer membrane integrity. Gene pairs similar to the TolQ and TolR gene pair often number several per genome, but this model describes specificially TolQ per se, as found in tol-pal operons. A close homolog, excluded from this model, is ExbB of the ExbB/ExbD/TonB protein complex, which powers transport of siderophores and vitamin B12 across the bacterial outer membrane. The Tol-Pal system is exploited by colicin and filamentous phage DNA to enter the cell. It is also implicated in pathogenesis in several bacterial species [Transport and binding proteins, Other, Cellular processes, Pathogenesis].	4.79005e-94
NC_021661.1\|WP_020443335.1\|1335807_1336452_+\|cytochrome-c	gnl\|CDD\|224921	COG2010, CccA, Cytochrome c, mono- and diheme variants [Energy production and conversion].	4.03971e-15
NC_021661.1\|WP_011513469.1\|1336569_1337862_-\|PD40-domain-containing-protein	gnl\|CDD\|274305	TIGR02800, Protein_TolB, tol-pal system beta propeller repeat protein TolB. Members of this protein family are the TolB periplasmic protein of Gram-negative bacteria. TolB is part of the Tol-Pal (peptidoglycan-associated lipoprotein) multiprotein complex, comprising five envelope proteins, TolQ, TolR, TolA, TolB and Pal, which form two complexes. The TolQ, TolR and TolA inner-membrane proteins interact via their transmembrane domains. The {beta}-propeller domain of the periplasmic protein TolB is responsible for its interaction with Pal. TolB also interacts with the outer-membrane peptidoglycan-associated proteins Lpp and OmpA. TolA undergoes a conformational change in response to changes in the proton-motive force, and interacts with Pal in an energy-dependent manner. The C-terminal periplasmic domain of TolA also interacts with the N-terminal domain of TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi , Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear. [Transport and binding proteins, Other, Cellular processes, Pathogenesis].	1.11427e-102
NC_021661.1\|WP_020443349.1\|1356423_1357815_-\|adenylosuccinate-lyase	gnl\|CDD\|236452	PRK09285, PRK09285, adenylosuccinate lyase; Provisional.	0
NC_021661.1\|WP_020443334.1\|1332508_1333963_+\|c-type-cytochrome	gnl\|CDD\|224921	COG2010, CccA, Cytochrome c, mono- and diheme variants [Energy production and conversion].	1.47561e-10
NC_021661.1\|WP_020443344.1\|1347599_1349258_+\|FAD-binding-domain-containing-protein	gnl\|CDD\|274365	TIGR02963, Includes:_Xanthine_dehydrogenase, xanthine dehydrogenase, small subunit. Members of this protein family are the small subunit (or, in eukaryotes, the N-terminal domain) of xanthine dehydrogenase, an enzyme of purine catabolism via urate. The small subunit contains both an FAD and a 2Fe-2S cofactor. Aldehyde oxidase (retinal oxidase) appears to have arisen as a neofunctionalization among xanthine dehydrogenases in eukaryotes and [Purines, pyrimidines, nucleosides, and nucleotides, Other].	2.32957e-163
NC_021661.1\|WP_020443348.1\|1354803_1355976_-\|cupin-domain-containing-protein	gnl\|CDD\|225406	COG2850, COG2850, Uncharacterized conserved protein [Function unknown].	3.49975e-105
NC_021661.1\|WP_020443345.1\|1349422_1351993_+\|xanthine-dehydrogenase-molybdopterin-binding-subunit	gnl\|CDD\|274367	TIGR02965, xanthine_dehydrogenase, xanthine dehydrogenase, molybdopterin binding subunit. Members of the protein family are the molybdopterin-containing large subunit (or, in, eukaryotes, the molybdopterin-binding domain) of xanthine dehydrogenase, and enzyme that reduces the purine pool by catabolizing xanthine to urate. This model is based primarily on bacterial sequences; it does not manage to include all eukaryotic xanthine dehydrogenases and thereby discriminate them from the closely related enzyme aldehyde dehydrogenase. [Purines, pyrimidines, nucleosides, and nucleotides, Other].	0
NC_021661.1\|WP_020443343.1\|1346137_1346827_+\|1-pyrroline-5-carboxylate-dehydrogenase	gnl\|CDD\|237018	PRK11905, PRK11905, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed.	6.16492e-25
NC_021661.1\|WP_011513467.1\|1334161_1335763_+\|flavin-monoamine-oxidase-family-protein	gnl\|CDD\|224152	COG1231, COG1231, Monoamine oxidase [Amino acid transport and metabolism].	4.90306e-116
NC_021661.1\|WP_020443338.1\|1339113_1339572_-\|protein-TolR	gnl\|CDD\|274306	TIGR02801, Protein_TolR, TolR protein. The model describes the inner membrane protein TolR, part of the TolR/TolQ complex that transduces energy from the proton-motive force, through TolA, to an outer membrane complex made up of TolB and Pal (peptidoglycan-associated lipoprotein). The complex is required to maintain outer membrane integrity, and defects may cause a defect in the import of some organic compounds in addition to the resulting morphologic. While several gene pairs homologous to talR and tolQ may be found in a single genome, but the scope of this model is set to favor finding only bone fide TolR, supported by operon structure as well as by score. [Transport and binding proteins, Other, Cellular processes, Pathogenesis].	5.04941e-39
NC_021661.1\|WP_144061755.1\|1351985_1352972_+\|xanthine-dehydrogenase-accessory-protein-XdhC	gnl\|CDD\|274366	TIGR02964, conserved_hypothetical_protein, xanthine dehydrogenase accessory protein XdhC. Members of this protein family are the accessory protein XdhC for insertion of the molybdenum cofactor into the xanthine dehydrogenase large chain, XdhB, in bacteria. This protein is not part of the mature xanthine dehydrogenase. Xanthine dehydrogenase is an enzyme for purine catabolism, from other purines to xanthine to urate to further breakdown products. [Protein fate, Protein folding and stabilization, Purines, pyrimidines, nucleosides, and nucleotides, Other].	3.79181e-64
NC_021661.1\|WP_020443341.1\|1340811_1342107_+\|NCS2-family-permease	gnl\|CDD\|225161	COG2252, COG2252, Xanthine/uracil/vitamin C permease [Nucleotide transport and metabolism].	3.88867e-154
NC_021661.1\|WP_020443331.1\|1329812_1330778_+\|laccase-domain-containing-protein	gnl\|CDD\|376831	pfam02578, Cu-oxidase_4, Multi-copper polyphenol oxidoreductase laccase. Laccases are multi-copper oxidoreductases able to oxidize a wide variety of phenolic and non-phenolic compounds and are widely distributed among both prokaryotes and eukaryotes. There are two main active catalytic sites with conserved histidines that are capable of binding four copper atoms.	3.67786e-62
NC_021661.1\|WP_187289135.1\|1331111_1331663_+\|flavodoxin-family-protein	gnl\|CDD\|223728	COG0655, WrbA, Multimeric flavodoxin WrbA [General function prediction only].	4.4559e-24
NC_021661.1\|WP_144061795.1\|1353356_1354643_+\|guanine-deaminase	gnl\|CDD\|236419	PRK09228, PRK09228, guanine deaminase; Provisional.	0
NC_021661.1\|WP_020443342.1\|1342868_1346126_+\|bifunctional-proline-dehydrogenase/L-glutamate-gamma-semialdehyde-dehydrogenase-PutA	gnl\|CDD\|237017	PRK11904, PRK11904, bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA.	0

>NC_021661.1|WP_020443339.1|1339568_1340300_-|protein-TolQ
MPESLNIIDLITQASLLVQIVMALLLLASLLSWVIIFRMSARLGTARNFDQQFEAWFWSGEDLAKLYQGIQGSPERQGLEQIFYVGFSEYLRMHKKRQPKDDIIDGVERKLRVGLGRQQLLLESGLTTLASIGSVAPYVGLFGTVWGIMNAFLGLSQNEQATLAAVAPGIAEALIATAMGLFAAIPAVLAYNHFTAKSSRLYDSRALFCDEMTGMLQRETSNESPQPSTQVSQANQSTQVAGL
>NC_021661.1|WP_020443338.1|1339113_1339572_-|protein-TolR
MKQSPYRREKKALNAEMNVVPYIDVMLVLLVIFMVTAPMLITGVDVDLPKEQTNTMSQSQLPVIVSLTGNGEIFISYESNVDLPVSEPELIDTLSTLQSQSSEAGAQPVQVMINADQNNQYGAIMTLMATLQQAGIQKVGLLTGAPLPTPAV
>NC_021661.1|WP_020443336.1|1337998_1339006_-|TonB-C-terminal-domain-containing-protein
MHKAPTVYVPTEPEGNGLTLPTLLSLLAHGLVIGILIYTYQNMDVETAGSIETTMVSPEQLAEMQGQILANRAAAASAMQAESGSSSSATPTEAFDGSVSTPNPAQPNSQQVPVFTRSDESATSPMLMSEEQHQRLLEQNQEYERSMAEWAARLDESVLEEHDQIEKERRQQLIEEQKRLGDFRNKQNNPPKIKRPTATDRNIEINTGGSSSSGQTLSLSNDGQSTLSGDSTTSSPSKGNSRSASGGSRGASNSEIINLIRRNYNPPTAAKGSTQRATLTITVNASGNIINVTASGPDEAVNEAAKQAVLNTGSLPIDADDPKYPTFTLQFKGSN
>NC_021661.1|WP_011513469.1|1336569_1337862_-|PD40-domain-containing-protein
MRTHKKLLISLLASASSLLIAPSVLAAPVVLELDYEIPVQQNQVAFVPFAGDSVLSPIIVNDLSKTELKVTSQNLPQQPRSSSELAGTLPVWQSMGIPYLVVGSTRSSRGKVVTDYEVIEVKTGRVIEGKQTLTADNNKDSMRYAGHVIADKVYELITGIPGDFSGRIAYIEEIGTGKAKVSRLKVMDADGENAKTITEVSGSIFSPAWSPDGNRIAYSVQRDKSYPVIYVQSVSGGGATPLTPFPGSNLSPSFSPDGSKILFSSSFEGSADIYEMSASGGQPRRLTNWPSSEVQPSYAPDGRSFVFVSDKTGFNKPQIYRYEFGSGRTTKVSNSGYATSPQFSSDGTQIAFLNGRSAAVMNSGGAVTANLGNTGIDEAPSFSPNGKRVVYASKQGGKGVLTIKSLNGGEAFGKSGQGTIRSPVWSASPR
>NC_021661.1|WP_020443335.1|1335807_1336452_+|cytochrome-c
MNTIIMKITIMKSMTPKMLMIMLLSSSALLGCSQKAGDVETIASKHDVEQTVDYQASRNTGSWGAVYMSRDELKAQPINVVDDSSLPNMENDPIISEWEAKFEGSNAFITTDGKKLYHDSCAGCHMHKGEGAYGAGYYPPLANNSKMQSKYYIINILINGFRGMPSFHMMMNDEQMAAVTQYVVSDLNGYTDTVTAEDVAKLRHANPPGYDPSE
>NC_021661.1|WP_011513467.1|1334161_1335763_+|flavin-monoamine-oxidase-family-protein
MKDMLQSPTRRQLLSMIGKTAGATAMYQAMTTLGFASESSFKEAMDLKGAPAGASIVILGAGLGGLTAAYELRKAGYDVKVLEFQNRGGGRSWTLNSGDKYTELGGEEVTCDFEEGNYFNGGPWRLPSHHYAVFHYCKQFGVEMQPFIQTNDRAYLHRTNHFNGVPQRLGDIKNDIQGHVAELLSKSVNVGGLDRSVNTEDKEKLLEGLKGWGVLDKDYRYRASNETTKHRGFSVFPGGGLMPNEKPSKPLPISEILDSGMWGDIYSNHMTYGHQPTMFQPVGGMGKIGDAFTRECRDMIEFNAKVTKIHQDDTGVTVDYVDSNSPDGATKTIRADWCVCNIPLTVLTQLDINVSKPMKQAMAAVPYDTSYKVGLEFNRRFWEEDEWIYGGLTYTNMPITQIAYPSENMFKDGSGVLLGAYGFGATSYKFNTLTPQERINVALAYGKYIHPQYPKEFRAGTSVVWHRIPWTLGCYGIWSESSREQHYDNLCSIDNRIVLTGEHCSHIPAWQEGAILSGIDAAKRLHKKAKMLG
>NC_021661.1|WP_020443334.1|1332508_1333963_+|c-type-cytochrome
MKRFSMMLSMLAIGMASSAAMAEDTSLTNTSLPNATLPNISPANSVLVNRGAYIARAADCMACHGEDYTGGKAIETPMGEIYSTNITPSKRYGIGNYTEKDLKNALQKGRAPSHMLYPAMPYPSYSGMKEEDISALFAYLQTVPVVDEAPKHKTDLPFPFNIRALMFGWNFLNVPSTEGRDGLNETQKRGEYLVNNLEHCGTCHTPRNSTMGFDKKMYLSGAQLGHWYAPNITPDESSGIGSWSEQDIITYLRTGELDQRAYAGGPMGEAVAHSTQYLKQEDLSAIASYLKAVPAIQTDDKVSAVDVSRLPTRVNESITHDLLAQKDYLAQAKTAVSKGSNSPEALYLATCGSCHGVDGYGQPDAQYSPIVGLSSLRRDKPDVLVNMILHGVVGSTNTSPIMPAFSDELSSEQIASIANYVRISFGGLASSDVSAADVERIAATSAEKPFLIKYAGLLAILGIIVAIAVIIFIIRSIIRSKHRH
>NC_021661.1|WP_020443333.1|1331755_1331926_-|hypothetical-protein
MKSLTLTYIFTAALFMTGCQSFQFVESPIPVKNAPSKNLLVKTVPVADIAVENIEH
>NC_021661.1|WP_187289135.1|1331111_1331663_+|flavodoxin-family-protein
MSIAVIYHSNYGHTQRVAEAIVTGARQQLSEAQAKAVDVNDVDWEFLDQADLLVFGSAVYMGSVTAGFKTFMDATSKRWYHGKWQGKWAAGFANSGGLSGDKLAVLQQICLYSMQHGMNWIGLPLRPTGHEPHDLNRLSSNLGLMTQSLDGPPEETPGAGDIDTAIWFGDHLAKTIIKHQPAS
>NC_021661.1|WP_020443331.1|1329812_1330778_+|laccase-domain-containing-protein
MKNTLPMTLLAQLDDVAVFQTAAFSDIDYASIDISRSEINQQPHQRQQASYGELNLGLHVNDDASVVLSNRMRVLATINEQMIAQQNLPVHSVPVKALHWVNQVHGNHIHDTDATVLSMAPMAADAMVSKQDGTGLAIMTADCVPIVLYQPATGQIAAIHAGWQGLACGVIKATAERFSDSGEIMAWIGICISQDNYEVGSQVRDKLLAGCIANNALTTDAINNFNERYVMASGTRELDAASTADKLSNNTPVYAEKIKIDLPKIAADQLQAAGIVVCNESSILCSYADGHYYSYRRQTHLQQAATGRMALIITRSASIYS
>NC_021661.1|WP_020443341.1|1340811_1342107_+|NCS2-family-permease
MNAIERYFGIDGQNTTIKTEILAGVTTFLTMAYIIFVNPNVLADAGMDKGAVFVATCLAAAIGCFIMGIYARLPVALAPGMGLNAFFTYGVVLGMGYAWQTALGAVFLSGCIFILLSLFKIREIIINSIPVSIKQGVVAGIGAFLAFIALQTAGVIVNNDATLVGLGDMTSFSPAMAALGFIVIVGLSHKKVPGAVTIGILLVALISLLTGNTQFSGIISAPPPIAPTLMQLDIAGAFDVAMISVIFAFLFVDLFDTAGTLIATTTQAGLIGKDGKIPNMGKALLADSTATVAGTFLGTSSTTSYIESVSGIASGGRTGLMAVTVGVLFLLSVFFSPLAGMIPGYATAGAIFYVAVLMMETLKDVKWNDLTEAAPVVVVLLFTPLTYSVADGIALGFITFTAIKVVAGKFSDISIPVWILTVVLLAKIVFI
>NC_021661.1|WP_020443342.1|1342868_1346126_+|bifunctional-proline-dehydrogenase/L-glutamate-gamma-semialdehyde-dehydrogenase-PutA
MNPVEQFTPQEPILFNPIDLLSPEYIAQSSTELHARISPLYSVDEERWLTQLLPLAKPTDAERDSAATQTRQLVEHVRNDGKAVKMVDSLLLEYSLDTQEGVLLMSLAEALIRVPDNYTADALIHDKMSVADWKKHLKNDNGFMVNASTWGMMMTGRVVSIDSDTTASGFLDRMTKKMGEPVIRSAMQKAMRIMGHQFVLGETIEGANKNSQPYRNKGYTYSFDMLGEAAITHKDAEKYFNDYLHAIKATASVKVKEGMPKPSVSIKLSALHPRYEATQEAQVMGLLRQRCLLLIEAAREVNVDISIDAEEADRLEISLKLFESLYRDNLTADWDGLGLVVQGYSKRAIAILAWLARLATEVGDRIPVRLVKGAYWDTEIKLAQQKGLSGYPVWTRKEGTDTAYLACARFLLSEHLRGLIWPQFATHNAHTLASIMTMSSHRDFEFQRLHGMGDALYDHILQAYQIPVRIYAPVGAHKDLLPYLVRRLLENGANSSFVHQLLDKSYPIDKLTVHPYDKLLTNATLHNPDIPLPLAIYGARRASFGPNIFVESQWIPFKAAIDTHIHKTWSATSVINGNAVNDNTVDGNTHQLDKQAVRAPWNHEVIAGEVVYANATIAQQAIAAAVAGQGEWQAVAATKRAAILRKIADLYEENYAELMALCQVEAGKTLQDSIDEIKEAVDFCRFYADEAERLDDVIYEFTDLAGKPSRQVYKARGTFICISPWNFPLAIYTGQVVAALAAGNTVVAKPAEQTSLIAHFGAQLMYQAGVPVEALQLVIGAGDVGAALTAADNIAGVIFTGSTQTAQRINQSLNAHAQVSGELPVFIAETGGQNAMIMDSTALPEQVVRDAVLSAFGSAGQRCSACRILCVQEEMADDLIELLQGNMAELIVGNPLYATTDVGPVIDIDAKRGLEAHIERMRAEPTATILAQTPMSDSSEVSQDQATFVLPTAIEVKSIDVIGGEHFGPILHVLRYEARDLNKLIDAINATGFGLTLGIHSRIENTVEHIERRAFVGNTYINRNQIGAVVNVQPFGGCGLSGTGPKAGGPHYVARLMSLTTEQLANEQVALIDNTAATRTQTIIA
>NC_021661.1|WP_020443343.1|1346137_1346827_+|1-pyrroline-5-carboxylate-dehydrogenase
MATEFKKNHGQVCETWRLLGAVNRATYLQEAAPRMALLTGDANKAKRLFNHLLSAAPMLDEEHRMTGATGESNDLYVTGRGKTMVVGGESARAMAVLGQLLAALLTGNEVILHCPSQDEMCIEAAKILYEAGISDDVLSVANDSQTVTLLYIDRLAQVAVSGNRQEVQAVSQELAKTDGMLTQVISVTDMDGLSEMLTPDYLYRFVTERVKTINTTAIGGNASLLELGT
>NC_021661.1|WP_020443344.1|1347599_1349258_+|FAD-binding-domain-containing-protein
MIHFYLNGQYKQLTDLNPNTTVLEYLRLHERQTDTKEGCGSGDCGACTVMAQRLPSSGEDSSDLPFYTLNACITLLSLMDGHHIMTSAYIADNPEHHPERALLHPAQQAMVECHGSQCGFCTPGFVMTLASTYENHRLQVAKGTIKDDLSYDDIVASIGGNLCRCTGYRPIIEAGLAMSEIGRQRDADQTIAKDLTISLATDAMANSRQTVSSEMGTIEPALTQGSRKLFIPQSVAELNQVLATHPKATIWAGGTDLGLSVTQHLVDHDIIVQLSAIDELKSWSLQALSLNTDEQSKGDSEVEFLVLGAGMSYKSMLPALEQHFPAFANLFERIASPQIRNMGTIGGNVANASPIGDLPPILLALDAHIHLRHCAAIDNAINSATDNLNVNNVHSNQVSSIDEIIPLSKFFLDYKKTKLRAGSYVVALHIPLMQDHQYLYIHKISKRYEDDISACLLAARLDLSADGMTIQDAKFGLGGMAAIPLLAAECQQALIGQAVNVASFEQAAQRLPNDVSPMTDVRASREYRMHVMQRLIIKCGKQLVADVQTVDA
>NC_021661.1|WP_020443345.1|1349422_1351993_+|xanthine-dehydrogenase-molybdopterin-binding-subunit
MSHHSSLFDSYSTRRQRPPKDKIGTQAKHDSAISHVMGTATYVDDMLKPQNTLHLAIGKSAHAHARVLNMDLSAVRTADGVIDVITFKDLPAKTDIGAVFDGDPLMVDQITEYVGQTLFTVVATSHRAAKKAVLKAIVEYEPLPAILTIDEALKQEQFVRPSHFMTRGDAQAELENAPTRIAGHIHMLGQEHFYLEGQVSYVIPCDDGGLEVYTSSQHPSEVQQLVAEVVDLPFHAVTTVVRRMGGGFGGKETQAAAWACLCGIVAKRHNVPVSMRLDRQDDMVVTGKRHEFANRYEVGVNDAGQVLGVDMQLSGLCGYSPDLSDAIVDRAMFHCDNAYYYPAAQIAGHRCKTHTVSNTAYRGFGGPQGLLTAEYMMDDIAYSLGKDPLQVRLANLYQNGQSTHYGQPIEHFDLATIMQTLADDNDYAKRREQITVANRKAEAEGSDKRFGLALTPVKFGISFTVQTLNQAGALVHIYTDGTIQINHGGTEMGQGLYIKIAQIVANEFDVDLDTVKVTATRTDKVPNTSPTAASSGTDMNGKAAQNACITIRDRLVEFAIEHFDVSAEDVKFERNHVHIGDKETLTFAEMVLLAYQHRVSLSSTGYYKTPKIFYDRSKAWGRPFFYFALGASCSEVEIDILTGEYKVLRCDILHDVGQSINPAIDIGQIEGGFVQGMGWLTAEELVWDKKGNLASNSAANYKIPTAHDLPKQWSVKLFERKNEEQTIYNSKAVGEPPFMLAASVWCAINNAIASLGDYQKNPELTMPATPEAVLKSVMRMQGQEWEIASKADTDTITSLTVTDDNCGIDDDKVKPQQVAHGKDINPTEVEGKLTDDQPEAIQNPNVSTARGPAHSE
>NC_021661.1|WP_144061755.1|1351985_1352972_+|xanthine-dehydrogenase-accessory-protein-XdhC
MNKSLITPMPPTKWYDGLAQYQQQGIAHILATVVAVNGSAPRELQSKMIVTLDACCDTLGGGSLEHDVTITARQLLNGEINGTDARSTQPLKEGKSAKAQAVRRDAVYTKHYPLGATLAQCCGGSVTVMFECFNVTPPMTLLVFGAGHVAAALMNILAELPCQVDWVDSRAEMFERYLTHNPDTVEGQVTYQLPTHIRPHLDEDPVDFVQPFVAKSIKSASINASMKKGTQYFILVMTHDHSLDFDLVRATLDSYVKIGIDSSSLPYLGCISSATKAKRFRDRLLQRDYSEQIADKLTMPIGLNTGGKEPMAVAISIAAQVMQLYHDL
>NC_021661.1|WP_144061795.1|1353356_1354643_+|guanine-deaminase
MVAGVKVYPEYIANGALVVDDATGRVVDYGSCASMMSQYGNASRQEGQAPVQIHDYQDKLIMPGFIDTHVHYPQIDMIAAFGEQLLDWLNNYTFVTEANFGDAKIADDTAKFFLNQLLANGTTSALVFSTSHPQSVESFFNESSRLNTRMITGNVLMDQNAPEHLCVPTEQGIRDTQNIIDKWHERGRQHVAITPRFAITSTAKQLQMTGELYRSYDSVYLQTHLAENLDEIAFVRELYPNHKGYLDVYHDMGLLGRYTTLAHGIHLSTSEYEVLRDTGTQIAHCPTSNLFLGSGLFDLSKTLSYTGVSIATDVGAGTSLSMLTTLSEAYKVQQLQSNPLSAHQGLYQITLGNAQSLLLDDKIGNFMPNKEADFVVIDMGGTDLMERRMTQTKSLDEQLFVLMMLGDDRVIEETIIAGVSRYKKAVAT
>NC_021661.1|WP_020443348.1|1354803_1355976_-|cupin-domain-containing-protein
MTSIPLCLPNTITPEQFLSDYWQKKPLLIKQGLPQLIGMFEPGDILGLAIDEDATARLLTQAASKQEGQPQWQLKKNPLTEADFDNLPEQWSVLVQNLEQWSPELGALWQALDFIPQWQRDDIMVSYAPKGGSVGKHYDDYDVFLAQGFGSRRWQLGKFCDEQTQFVADEPIRLFDDMGEIIFDEILEAGDVLYVPPKLAHFGVAQDDCLTFSFGCRRPNLMQIIDSLADIATNDSALFIPMLLPQAMQASGELKTDSIEAIKTQLLQLLQSERGDTIIRQAVSEVVSKRQYDVLVPEESLTTDEMIAALATGATLQADYSNRLLYTQADNDIVLYANGQRLDDLHETSIALLVRLSNGEHLSLDDMEGIDPDEVMEWLENGWIWMNHPE
>NC_021661.1|WP_011513481.1|1356107_1356293_+|NF038104-family-lipoprotein
MKKLHFIVIIASMFLLQACVHKIVTVPAKIAYKTTKGVVKGTVAVGKAIIPGDSSDKDDKE
>NC_021661.1|WP_020443349.1|1356423_1357815_-|adenylosuccinate-lyase
MNLLTALSPIDGRYASKADSLRPYLSEFGLIKARVTVEIRWLQSLADNSAIGELAEFDTNTNAFLNAIVDNFSEADAQAIKDIEATTNHDVKAVEYFIKDKFRGQAALEDSLEFIHFACTSEDINNLSYALMLKDSREIVVAKMQEVTDSVVNLAIIHADQPMLSRTHGQTASPTTLGKEMANVAYRLARQIKQVGQVELLGKINGAVGNYNAHYASYPDVDWQNHAEKFINERLELTFNPYTTQIEPHDYIAELFDAVKRFNTILIDFNRDIWQYISLGYFKQRLKDGEVGSSTMPHKVNPIDFENSEGNLGVANAMLAHLGEKLPISRMQRDLSDSTVLRNIGVGLAQSMIAYDACLKGVSKLELNAQRLNDDLDNAQEVLAEPIQTVMRRYRVENPYEKLKALTRGNAMTREAMLTFVEGDELSAVSESDKNSLREMTPATYIGNAAEQARTIKEWIAKI

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Crispr_ID: NC_021661_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_021661_2

2135301-2135862

TypeI-F

Consensus_repeat	Method
CTTCATCACCGCTCAGGTGACTTAGAAA	CRISPRCasFinder
CTTCATCACCGCTCAGGTGACTTAGAAA	PILER-CR

9 spacers

cas6f,cas7f,cas5f,cas8f,cas3f,cas1

The CRISPR arrays of NC_021661_2

>merge|NC_021661|2|2135301-2135862|CRISPRCasFinder,PILER-CR
CTTCATCACCGCTCAGGTGACTTAGAAAGTAAGGGGTTTAGGGTGTTTCTTGACAGTCTTCTTCATCACCGCTCAGGTGACTTAGAAAATTGGATAGTCGTTGCCATCGTTTTGACCGTACTTCATCACCGCTCAGGTGACTTAGAAAATATATATGGTGAAGGAATGAGTAAAGTAAAACTTCATCACCGCTCAGGTGACTTAGAAAATATATAAGGTAGTAGAAGACTTGGTAACAATCTTCATCACCGCTCAGGTGACTTAGAAAGCCATCGGTCAATAGCTACTGGAAAAGAAACACTTCATCACCGCTCAGGTGACTTAGAAAAGTTAGTAGTTAAGCCCTCATTGATTCCACTCCTTCATCACCGCTCAGGTGACTTAGAAAATCAGCTCATCACGTTCTTCGTTTACTTTCATCACCGCTCAGGTGACTTAGAAAATCAGCTCATCACGTTCTTCGTTTACTTTTGCCTTCATCACCGCTCAGGTGACTTAGAAAGTAAACGTGAGTACGATCATCGTGATGAAAAGCTTCATCACCGCTCAGGTGACTTAGAAA

>NC_021661|2|2|2135301-2135862|CRISPRCasFinder
CTTCATCACCGCTCAGGTGACTTAGAAA	GTAAGGGGTTTAGGGTGTTTCTTGACAGTCTT
CTTCATCACCGCTCAGGTGACTTAGAAA	ATTGGATAGTCGTTGCCATCGTTTTGACCGTA
CTTCATCACCGCTCAGGTGACTTAGAAA	ATATATATGGTGAAGGAATGAGTAAAGTAAAA
CTTCATCACCGCTCAGGTGACTTAGAAA	ATATATAAGGTAGTAGAAGACTTGGTAACAAT
CTTCATCACCGCTCAGGTGACTTAGAAA	GCCATCGGTCAATAGCTACTGGAAAAGAAACA
CTTCATCACCGCTCAGGTGACTTAGAAA	AGTTAGTAGTTAAGCCCTCATTGATTCCACTC
CTTCATCACCGCTCAGGTGACTTAGAAA	ATCAGCTCATCACGTTCTTCGTTTAC
TTTCATCACCGCTCAGGTGACTTAGAAA	ATCAGCTCATCACGTTCTTCGTTTACTTTTGC
CTTCATCACCGCTCAGGTGACTTAGAAA	GTAAACGTGAGTACGATCATCGTGATGAAAAG
CTTCATCACCGCTCAGGTGACTTAGAAA

>NC_021661|2|1|2135481-2135862|PILER-CR
CTTCATCACCGCTCAGGTGACTTAGAAA	ATATATAAGGTAGTAGAAGACTTGGTAACAAT
CTTCATCACCGCTCAGGTGACTTAGAAA	GCCATCGGTCAATAGCTACTGGAAAAGAAACA
CTTCATCACCGCTCAGGTGACTTAGAAA	AGTTAGTAGTTAAGCCCTCATTGATTCCACTC
CTTCATCACCGCTCAGGTGACTTAGAAA	ATCAGCTCATCACGTTCTTCGTTTAC
TTTCATCACCGCTCAGGTGACTTAGAAA	ATCAGCTCATCACGTTCTTCGTTTACTTTTGC
CTTCATCACCGCTCAGGTGACTTAGAAA	GTAAACGTGAGTACGATCATCGTGATGAAAAG
CTTCATCACCGCTCAGGTGACTTAGAAA

Protein	Signature genes	Signature genes Name	Protein_function
NC_021661.1\|WP_020443864.1\|2141524_2144869_+\|tyrosine-type-recombinase/integrase	unknown	unknown	gnl\|CDD\|271189
NC_021661.1\|WP_020443866.1\|2145018_2146086_-\|LLM-class-flavin-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|274646
NC_021661.1\|WP_041772288.1\|2126317_2127313_+\|type-I-F-CRISPR-associated-endonuclease-Cas1	cas1	cd09718_cas1_CAS-I-F	gnl\|CDD\|132676
NC_021661.1\|WP_020443863.1\|2138994_2141538_+\|site-specific-integrase	unknown	unknown	gnl\|CDD\|271175
NC_021661.1\|WP_020443860.1\|2136247_2137564_+\|Y-family-DNA-polymerase	unknown	unknown	gnl\|CDD\|179607
NC_021661.1\|WP_020443867.1\|2146178_2147093_-\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|225130
NC_021661.1\|WP_020443853.1\|2125816_2126143_+\|hypothetical-protein	unknown	unknown	unknown
NC_021661.1\|WP_020443856.1\|2130810_2132331_+\|type-I-F-CRISPR-associated-protein-Csy1	cas8f	pfam09611_cas8f_CAS-I-F	gnl\|CDD\|378220
NC_021661.1\|WP_020443868.1\|2147171_2147720_-\|cysteine-hydrolase	unknown	unknown	gnl\|CDD\|238496
NC_021661.1\|WP_020443850.1\|2124089_2124305_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|285436
NC_021661.1\|WP_020443855.1\|2127313_2130799_+\|type-I-F-CRISPR-associated-helicase-Cas3	cas3f	cd09673_cas3f_CAS-I-F	gnl\|CDD\|274201
NC_021661.1\|WP_020443858.1\|2133559_2134522_+\|type-I-F-CRISPR-associated-protein-Csy3	cas7f	cd09737_cas7f_CAS-I-F	gnl\|CDD\|378222
NC_021661.1\|WP_020443861.1\|2137564_2137990_+\|translesion-error-prone-DNA-polymerase-V-autoproteolytic-subunit	unknown	unknown	gnl\|CDD\|182350
NC_021661.1\|WP_144061769.1\|2138527_2138998_+\|hypothetical-protein	unknown	unknown	unknown
NC_021661.1\|WP_020443852.1\|2125515_2125806_+\|hypothetical-protein	unknown	unknown	unknown
NC_021661.1\|WP_020443859.1\|2134521_2135118_+\|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4	cas6f	cd09739_cas6f_CAS-I-F:CAS-IV	gnl\|CDD\|378224
NC_021661.1\|WP_020443857.1\|2132327_2133527_+\|type-I-F-CRISPR-associated-protein-Csy2	cas5f	cd09736_cas5f_CAS-I-F	gnl\|CDD\|378221
NC_021661.1\|WP_020443870.1\|2149042_2149237_-\|heavy-metal-associated-domain-containing-protein	unknown	unknown	gnl\|CDD\|225328
NC_021661.1\|WP_020443851.1\|2124316_2125519_+\|site-specific-integrase	unknown	unknown	gnl\|CDD\|271189
NC_021661.1\|WP_020443869.1\|2147828_2148809_+\|GlxA-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|227311

Protein	Function_ID	Function_description	E-value
NC_021661.1\|WP_020443864.1\|2141524_2144869_+\|tyrosine-type-recombinase/integrase	gnl\|CDD\|271189	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons. This family of tyrosine based site-specific integrases is has origins in bacterial phages and conjugate transposons. One member is the integrase from Bacillus subtilis conjugative transposon ICEBs1. ICEBs1 can be excised and transfered to various recipients in response to DNA damage or high concentrations of potential mating partners. The family belongs to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The catalytic domain contains six conserved active site residues. Their overall reaction mechanism involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA.	2.58849e-08
NC_021661.1\|WP_020443866.1\|2145018_2146086_-\|LLM-class-flavin-dependent-oxidoreductase	gnl\|CDD\|274646	TIGR03558, oxido_grp_1, luciferase family oxidoreductase, group 1. The Pfam domain family pfam00296 is named for luciferase-like monooxygenases, but the family also contains several coenzyme F420-dependent enzymes. This protein family represents a well-resolved clade within family pfam00296 and shows no restriction to coenzyme F420-positive species, unlike some other clades within pfam00296. [Unknown function, Enzymes of unknown specificity].	2.00494e-137
NC_021661.1\|WP_041772288.1\|2126317_2127313_+\|type-I-F-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|132676	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the YPEST subtype of CRISPR/Cas system.	5.88374e-171
NC_021661.1\|WP_020443863.1\|2138994_2141538_+\|site-specific-integrase	gnl\|CDD\|271175	cd00397, DNA_BRE_C, DNA breaking-rejoining enzymes, C-terminal catalytic domain. The DNA breaking-rejoining enzyme superfamily includes type IB topoisomerases and tyrosine based site-specific recombinases (integrases) that share the same fold in their catalytic domain containing conserved active site residues. The best-studied members of this diverse superfamily include Human topoisomerase I, the bacteriophage lambda integrase, the bacteriophage P1 Cre recombinase, the yeast Flp recombinase, and the bacterial XerD/C recombinases. Their overall reaction mechanism is essentially identical and involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA. The enzymes differ in that topoisomerases cleave and then rejoin the same 5' and 3' termini, whereas a site-specific recombinase transfers a 5' hydroxyl generated by recombinase cleavage to a new 3' phosphate partner located in a different duplex region. Many DNA breaking-rejoining enzymes also have N-terminal domains, which show little sequence or structure similarity.	0.00218361
NC_021661.1\|WP_020443860.1\|2136247_2137564_+\|Y-family-DNA-polymerase	gnl\|CDD\|179607	PRK03609, umuC, translesion error-prone DNA polymerase V subunit UmuC.	1.39181e-166
NC_021661.1\|WP_020443867.1\|2146178_2147093_-\|MBL-fold-metallo-hydrolase	gnl\|CDD\|225130	COG2220, COG2220, Predicted Zn-dependent hydrolases of the beta-lactamase fold [General function prediction only].	2.06886e-16
NC_021661.1\|WP_020443861.1\|2137564_2137990_+\|translesion-error-prone-DNA-polymerase-V-autoproteolytic-subunit	gnl\|CDD\|182350	PRK10276, PRK10276, translesion error-prone DNA polymerase V autoproteolytic subunit.	2.38239e-43
NC_021661.1\|WP_020443856.1\|2130810_2132331_+\|type-I-F-CRISPR-associated-protein-Csy1	gnl\|CDD\|378220	pfam09611, Cas_Csy1, CRISPR-associated protein (Cas_Csy1). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This entry, typified by YPO2465 of Yersinia pestis, is a CRISPR-associated (Cas) entry strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy1, for CRISPR/Cas Subtype Ypest protein 1.	9.35774e-72
NC_021661.1\|WP_020443850.1\|2124089_2124305_+\|hypothetical-protein	gnl\|CDD\|285436	pfam08220, HTH_DeoR, DeoR-like helix-turn-helix domain.	0.00903275
NC_021661.1\|WP_020443855.1\|2127313_2130799_+\|type-I-F-CRISPR-associated-helicase-Cas3	gnl\|CDD\|274201	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST. The helicase in many CRISPR-associated (cas) gene clusters is designated Cas3, and most Cas3 proteins are described by model TIGR01587. Members of this family are considerably larger, show a number of motifs in common with TIGR01587 sequences, and replace Cas3 in some CRISPR/cas loci in a number of Proteobacteria, including Yersinia pestis, Chromobacterium violaceum, Erwinia carotovora subsp. atroseptica SCRI1043, Photorhabdus luminescens subsp. laumondii TTO1, Legionella pneumophila, etc.	0
NC_021661.1\|WP_020443858.1\|2133559_2134522_+\|type-I-F-CRISPR-associated-protein-Csy3	gnl\|CDD\|378222	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This entry, typified by YPO2463 of Yersinia pestis, is a CRISPR-associated (Cas) entry strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy3, for CRISPR/Cas Subtype Ypest protein 3.	1.31043e-135
NC_021661.1\|WP_020443870.1\|2149042_2149237_-\|heavy-metal-associated-domain-containing-protein	gnl\|CDD\|225328	COG2608, CopZ, Copper chaperone [Inorganic ion transport and metabolism].	1.08586e-08
NC_021661.1\|WP_020443868.1\|2147171_2147720_-\|cysteine-hydrolase	gnl\|CDD\|238496	cd01014, nicotinamidase_related, Nicotinamidase_ related amidohydrolases. Cysteine hydrolases of unknown function that share the catalytic triad with other amidohydrolases, like nicotinamidase, which converts nicotinamide to nicotinic acid and ammonia.	9.07184e-57
NC_021661.1\|WP_020443859.1\|2134521_2135118_+\|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4	gnl\|CDD\|378224	pfam09618, Cas_Csy4, CRISPR-associated protein (Cas_Csy4). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This protein family, typified by YPO2462 of Yersinia pestis, is a CRISPR-associated (Cas) family strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy4, for CRISPR/Cas Subtype Ypest protein 4.	5.9618e-56
NC_021661.1\|WP_020443857.1\|2132327_2133527_+\|type-I-F-CRISPR-associated-protein-Csy2	gnl\|CDD\|378221	pfam09614, Cas_Csy2, CRISPR-associated protein (Cas_Csy2). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This entry, typified by YPO2464 of Yersinia pestis, is a CRISPR-associated (Cas) entry strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy2, for CRISPR/Cas Subtype Ypest protein 2.	3.45792e-92
NC_021661.1\|WP_020443851.1\|2124316_2125519_+\|site-specific-integrase	gnl\|CDD\|271189	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons. This family of tyrosine based site-specific integrases is has origins in bacterial phages and conjugate transposons. One member is the integrase from Bacillus subtilis conjugative transposon ICEBs1. ICEBs1 can be excised and transfered to various recipients in response to DNA damage or high concentrations of potential mating partners. The family belongs to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The catalytic domain contains six conserved active site residues. Their overall reaction mechanism involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA.	1.63885e-35
NC_021661.1\|WP_020443869.1\|2147828_2148809_+\|GlxA-family-transcriptional-regulator	gnl\|CDD\|227311	COG4977, COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain [Transcription].	2.02117e-88

>NC_021661.1|WP_020443859.1|2134521_2135118_+|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4
MQYYQEITIIPDPDIAPYFIWSKLFIQLHIAFADIKNNHSIDSIGVSFPDYHYDDKNEQSSKLGLKLRLFAPSQKDLETLNLNDWLSRLMDYVHIKGIKEVGDKITGYVSVHRYRFKPLEVQVQSLAKKMEISNHKAIAIVAKRKAELNLPFIRMYSESNKSHYPLQILQQPCEEEITGRFNVYGMNGMSNHVTVPQW
>NC_021661.1|WP_020443858.1|2133559_2134522_+|type-I-F-CRISPR-associated-protein-Csy3
MSKITLPTMLAFERKIENSDALMFSGNWDNKENTGKWQPIAIIPRLNRSTQSAQGIADAKKIMPNPVAASNDDANLPLEHDTLKLSFTLRIIGNLGLPFACNSPDFETAITAKVNTFKDTDIMGELAKRYAYNIANGRFLWRNRVGAEDITVIVKINNEETLTFNAYDYSLNSFDQADDKVKKLANAIKRGLSNDTFVLLTVNAFVKLGNGQHVFPSQEMNMGEKRKALFKIKDQAAMHNVKIGNALRTVDDWYSDDAQFPIAAEPYGSVTQRGQAYRKSKNDLYTLMVEWINDHELSPEQQAYVVSNLIRGGVFSKGGD
>NC_021661.1|WP_020443857.1|2132327_2133527_+|type-I-F-CRISPR-associated-protein-Csy2
MSNFLLIDHIDIQGANTVAGFTWGFPAITHFLGFVHLLQRKIHQHADFHSIKLAGCAVIAHDQQTSAYCSGSTIAFTQSRNPPYLASHAKDSPPPIIEEGKMSMTVSLLIEVEDSVKQYGQVFIDWVQQQSYLQRLAGGSIFNIAGVTGFAINNDEDKASLRALQRKLLPGFALINRSNLLDDYFESMQTDNPSTEIFDAWIDFFALKRRARPAYDLIDRHLVGLLKDQDSDNTILIAEWKHHLEKSYNPKELPDNLLNYFSHLVADKPNKNLIDQWQQYMEPTERTTAKWEYIPKPARGYLVPIMCGYKAISEVLNNDEVTGTRDSATEVCFVEAVHSIGEWQSVHRWKNLNDVSNSFWQYNYSPDWYLCSNHHSFEKSDSTATDDIDALLVQDLNSL
>NC_021661.1|WP_020443856.1|2130810_2132331_+|type-I-F-CRISPR-associated-protein-Csy1
MIDNNENHWETLILGFLLAKFEADLSKFTKETFKNMQNLITKPNTVSEDFEDFLDTRKNKQPDNISEKSFLMSRMDSLFEHLELTDIVDKSSLESDYTALIDKLNKKYEAHAWIEDASNNASSITFATHVAKLTHSKIDSSSLNDTLSSSRPDVLTTSSLSEIIIDGAVAGNQYAPIYQFLSLEHDGVNLAQAFTQLSNNLLKSFAKDEVQLAEWNERFRQVTQPSTLSTHSLAKQVYFPVNSDTLEQARYHLLCPIISSSLAQHIFTTLFNDALKLSRKQYFDKKYHADIFYDYPQKAAIAVTASNHSNASQLNGKRGGKLYLFNTKPPIWQTQIKPPNFESNMFNHEPLNYLCTDNLKGFQAMFLGAVEVYRKPHIMAGIEKWIQAISDDVIAYASLIQQLPAGWSAGSKLESNNIEHCYFLDCNRQDNTFVLKQQSNDWQRVVAHDFGSWINNKLNKNSKNFTPQAEHRKLWQKLFAQQLHDYLNIFIIENTDQQAIDKGATI
>NC_021661.1|WP_020443855.1|2127313_2130799_+|type-I-F-CRISPR-associated-helicase-Cas3
MIVTLVSQCEKKALSRTRRILDAFANRIGDNVWQTAITEEGLKTVKQLLRSSATKSTAVSCHRNKTRQLTELVWVVGNKRKFNEVGIVPVNVTERDVSIYQDSHHWRTSTIIRYASAIAGLFHDFGKANILFQQKINPKLKTDSFEPYRHEWVSLRLFEVLVDKDDTDQAWLNILINGDKPSLDNLYKDGLSEDKEFTNPLISLPPFARLVAWLIVAHHKLPSYPKWKNELGDEPNFNDINQWLDTFKPTWNSPNCLDIEQQSRLADNWEISHHGLPYYSLQWTSYACLLATKAKQALSSQLLDTTDFLKDELFTAHISRLALMLADHHVSSFNITETHEQLRQKGWKSERYPVYANTRMVDEHTKDYKQQLDEHLIGVAHHAEQIIKALPKFKSELRGLSTNSFLEDKVKTTLSLTIKGEDKKQIIDNLYQKFSWQDDAKKTAEKVGKDTLKNGFFGINMASTGSGKTLANAKIMYALGKATGQVRFNVALGLRTLTLQTGKEFQEALELSDDDLSITVGGISVKALFENQQKSKEEKSTNEQLGSPSADDYLNPDLYVNYTGTLTNHALSQWTKRKPTTENLLQPPVLVCTIDHLIPATEGIRGGQQIAPMLRLLTSDLILDEPDDFGLTDLPALCRLIHWTAMLGSRVILSTATMPPALVYACFDAYQSGWQAFAKANIEDWNSSIQCAWFDETQSSIASLETSLDNFKKLHNSFVEKRVKQLEKLPPKRLGKVVIMKEDASQKATENISQAIYNSIHELHAHHHSSKNDKTISIGLVRMANIDPIVAVAKSLLDMDAPANTCIHYCVYHSRYALAVRSHLEEQLDHILKRKDNKRIWDTDDGLGDIVNSYNEKHHIFVVVASPVAEVGRDHDYDWAIIEPSSMRSIIQIAGRVLRHRDMQPKLPNIHVLNKNIKALSNKEICFTKPGFESKNATIEDDQLISHLTLYSHQLNDSLTDKKLSSILREGEINIISATPRISLFPFERTLIESSATSRKKDAKHHVQYKHLTALEHMALFEALYKGLKPASVWWSSYPHWCGEVQRQQRFRDSKNDISYRLYFADEFHGMTFKHMNTDKRPPELGEPLDKFKNDEWQPKGNNSVFWFDLNPLKIYQQRAKDFNLTLDKVSVQFGEFRVTKYGEEQSTFFYHNHLGIYSKH
>NC_021661.1|WP_041772288.1|2126317_2127313_+|type-I-F-CRISPR-associated-endonuclease-Cas1
MAKPSNAYTDNSFASSDLKTILHSKRANIYYLSHCRVMQKDGRILYLTEEDKANLFYNIPIANTTSILLGTGTSITQAAMRLLSQAGVLVGFCGGGGSPLFMGTEREIFIEWMTPQSEYRPTEYIQGWMSWWWDDDKRLMAAKLLQHARLAYLQTVWSRDSELKRWGFDSSNDAVQALLSDNIRQINQQMEVMHLLQLEARLTKQLYKLAAKNTGYDGFTREHEGIDKANGFLNHGNYLAYGLGATTAWTLGIPHGFAVMHGKTRRGALVFDIADIIKDALVLPLAFICASENMSEQEFRQECLNIFTKHKALDYQFEVIKQIAMTKNWEA
>NC_021661.1|WP_020443853.1|2125816_2126143_+|hypothetical-protein
MSVKLQPSMTQNARDLKVCADYWAYSNNDGYDGYIEHVNALCCQYEISLHVLFETIGQCFAYLDDVLCEYCGYICPLEVPADIPYMRSKQSWCCEVCEHAAWREHNNR
>NC_021661.1|WP_020443852.1|2125515_2125806_+|hypothetical-protein
MKIINYAKLFSEFKPDGVVSEDANILANTLICELHISFGFNLARFLGVNSYFDNHMAMRAWVQKRLDANPDYVCDEMCGQLESELYGLLPQTGYGY
>NC_021661.1|WP_020443851.1|2124316_2125519_+|site-specific-integrase
MASIRTRKGSNMLFVDFYYMGIRCRETTNLTDTPANRKKLEKVIEKMEAEITLGLFNYAKYFPKSDKAAEMVALNDRKECINTNTPSFEQFAELWFSEKEIEWRDTYKRKIKEIIDMYLIIKFGTRPIHLIKKTDVLAFRSSLAKVTYGKANKHLSAARINSIMVPLGMILKEAAKRYQFDSPYYDINALKQPKTDIQPFTLNEVWKFINGVRADYRNYYLVRFFTGMRTSEIDGLTWENIDFDRREIVIKQAYVKGKIVPPKTQESYRSIQMSPWVYDALKEQQVVTYKRSDYVFCAHTGEPLDYNNVNKRVWHPTLKILGLKKRNAYQTRHTAATLWLAAGESPEWIASQMGHSTTKMLFNTYSRYVPNMTRQDGSAFEALVNRSQIAQISTDKETSQ
>NC_021661.1|WP_020443850.1|2124089_2124305_+|hypothetical-protein
MSHTYLTTQELSELIKYNPRTIRNELKDSVLIEGIHYIRPFGGRKILYVWEEIEKDMRTGIAGSINAMALQ
>NC_021661.1|WP_020443860.1|2136247_2137564_+|Y-family-DNA-polymerase
MYALIDCNSFYASCEKLFRPDLKDKPVVVLSNNDGCVVARSPEAKLLGIKMGVPYFQVKDFCIKNNITVFSSNYALYADMSQRVMNTLETLCPTVEVYSIDEAFLYLADYPVALQDLSAYGHKLKAIVEMHTGIPVGVGIGTTKTMAKLANHAAKTYPATKGVCVLDNIRWIRRIMQITGVGELWGVGRRYKVRLNEIGIHTVYQLAICEPAKIRQHFGVVLERTCLELNGQSCLGIESIEPKKQIISSRSFSERITDQQALSESICAHVAKAASKLRKQDSVCAYITVFAKNSPFSKNEPYVFISGDYQFITLTADTRVMVTAARQVLKVIYREDVRYAKAGVMLLGICQHDEVQLDLFAEDKSDHNDNGQDESIKKRTEVIAIMDALNKKYGQNSHQQSAVFIASEGIKDKQSWEMSCNMLSPCYTTNINQLPKVH
>NC_021661.1|WP_020443861.1|2137564_2137990_+|translesion-error-prone-DNA-polymerase-V-autoproteolytic-subunit
MTVKIIGKLTDEGETVLLSLYSDKVKAGFPSPATDYVQNRIDLNTLLIRHPASTYLVEVEGDSMVDIGIYPNDILIVDRSLTACHKDIVIALVDDGFTAKQLILGENIILRAHNENYADIVVKGSLELFGVVASSIRRFKR
>NC_021661.1|WP_144061769.1|2138527_2138998_+|hypothetical-protein
MLVYPEIVSLFAIYTNYIRPFINDQALKIEQSNACLKPTSFIKEDKKWFLANNFELFHLIKNSDIDFCVLRKEVPIRYIAKDQFEFDLGFYELIEIITQHNKKLDIKLIYRQLKTMLDKQMNQQLFGKNIFAVTKFCELIDITEQTYHARRCGVSM
>NC_021661.1|WP_020443863.1|2138994_2141538_+|site-specific-integrase
MTQNNKTSSSQQQISSEISRKTISALKNDGSFDYPETVIEAISTIVSAMHYSYQSEENAIADLSKTIVQTLQERPVADQYMQINRTDLAQKPLIMQLLILMQDIVIKQQLGQSVQQLVWLSIAMHTAALLIVSGRKTDTDTNNILMQFKMAQFSASSRRKWLWQALPNIAQTEISIKRILSEFNSLLEQQKSALEVLNDKQTTHIEEKKASTGKSNENDKHTEKIKKDKADAKAKLSQIEKITTAYQNAHVLQKPKPKRKKPPKNIKIKAINLADNTSTSDLDSTATSHNWNTTSSNDAWISSIRDDIEHSATAVDLAFLDPNTEIYEGLTTSFEERIDHYEAPYVSYGEYPNPLIKNSIPLQTIDLSLQQNYMSQRNLALNSNTRLLSVAGYQALFAALNQDASTLPESETHKTYAGILLLSMITGLPVKSLLIPGYIGHPGIFNLEGKKYYIKHSLGITERSTSQTLGEENYENHSDTIKVPLPSWLIDDLLACELPLKEDFTAYLADLRSSLGLPYLSVNRIETALHVMLSRYTPDCHEHIADIICRTPAPHAPAMYYSSHTSEMIVAHYKSALSVLSSLSSFDLTYITPWHKYTVGSGFAFKIDSVQKIMNDMKVWADQSSNDADHFNRTSIFVWFIFCILTGVRPNNGLGKTYNIDLEIGWLLINDKPVKKVKSDRLIPLCPTLVRHLIDYRDYLIDYQAKHQLKHDISKTIDSIRLGNDEALLKLLSASVNNLKNIKRGDAYHMTKDIIDANPYWTRHFVRTQLGKHSVQLPLINTIIGHEKARQEVLGRFSSSSKADIKRVAPVFEQIAEQLELNLIEIKNYSKLSHIQRRHVEVDHANK
>NC_021661.1|WP_020443864.1|2141524_2144869_+|tyrosine-type-recombinase/integrase
MLINNIHLPKIIDGLAKFDGRKKRYVPYPSLLDDSNPTRKRELQLLVDLQTEWDSLQKAYPGNIRFTQSLAKYYKQYEQLLWPDNRTFLAISSPASFADALWLPRSQVIGEFQRAFINKLKPLSDEGFDTFQAVVQDKVSQAYKTTKTLKQAWQTISQFINYQNQHYMLAKHYYPKIIAPQPTKFNPLIINNDWIKNGKSLVRTIRAVQMHWNQTADYSQDQILGWLIFSGIVYGGINEKQMLQGWLTSLLAKKYQPFIHQRIVVSPRFAQKRYGNEREEGSDKLYNTKQIVVDMVSQCWLMRYHKNSDQAEIKRTLSELSSDKIEQYLTVVLSDVTKPLNIKPLPFSRFLHYASYHWEVLDGADIDHASVGVLRGMHNTAGLNTQDFERFLNQKCQYTDEPYNLEQILALSISKNSINQKETPSSSTKKIEVRKSDLIMNLTKDFKMDEKEKKRKLSQTTYTLIERVQKRYEQYDDLSEKILLDWVLSLLNRKESKSLSNKSILKYIKTIGYEWLYFTTAQPLDIWSEEEFEELYEDILEYKAVVRNNTNIGYSANLFKSIHNFAKEKYNLPSVNFQHSKNGRRVRAELISPQAYQAIIKQILGSIDILEREMFALLFILVYRTGMRKKELLGLKYNDIEGLKAATPSVVIRPNSYRSTKTQSSIRRVAVFALLKHDELDFFMNFVQSNIGGNPNKFIFTLSSDQRPIDDHVPLQLLKRVLKDISVDDNVAEHTFHGFRHTAVSNLSLALLGDPDLVHALTDYDKNDILRIKKGVLGEHIDAQDRWYALSGIMGHLSPERSFEYYNHFATLMATYALSEANITLPDQTLCNITGFTNKKINENNAIVSHNIVSIPSIRTLLFKSIIEGKRKSPRFTIEKCDVQPVLNAKPAATDELFGRYGLNRVQLLLQTYDKEVSLSKAAQLANISIHDANILIKRASEVAAITTKRNQPRFVKRTDSESTALSPLNIQYQSDLRLLSLLLNNAYRLREESGNDWTWFIEICRQRLSNSKAYLPFGKGDEKELQRFIDIAKKLLPLKHWLISSNEALLMKNMSPTDYQDIKRQSNNSIEAIHTGIASRDLRDQTNKWQYSPLLRFFVHMILITDESLSIAN
>NC_021661.1|WP_020443866.1|2145018_2146086_-|LLM-class-flavin-dependent-oxidoreductase
MNIPNNSGNAPFVLSVLDNAFTGVGYAIEDTFKEMIALAKLADKRGFQRFWMSEHHAMPGAAVPSPQMMVARLTGETERIRLGAGGIMLPNHVPLVVAEQFGMLDALAPGRIDLGLGRAPGTDGATASALRRHKAANDEFPQQVAELLGFLENSFPKDHPYSEVHAVPGPWQAEQNRVPPSKTATDVWILGSSTYSAHMAAQLGRPYAFALQFGSADVLNAMRIYRENFRPSKTLAKPYSLVSIGAIADEDPVEARRQSTSTAMAMLRMFQRKPFALLPPEEVAAFQGNVQERQIIEQYTDQTLHGTAAEVAKGLEGLQEQTGVDEVMMVVQGYSRRAQSRTVELIADHYGMPSQ
>NC_021661.1|WP_020443867.1|2146178_2147093_-|MBL-fold-metallo-hydrolase
MKIAKLLTSTTLLSGVMLLTACTTFASPAANSNAVKDTATNTVQFQQIRNATIKLDYAGTTFLIDPMLAPKNAYAGFADTLNSEIRYPVVDLPMSVAEVLKADAIILTHLHADHWDDAARNLVPRNMPIFTQNEADAATVRKDGFTDVRVLTQQGVVFKGTRINKTIGQHGTDEMYKVPALAQALGKTMGIVFQKPNYKTVYVAGDTIWNKEVENALTRYKPDAVILNTGYAKLTTFVDDSIIMGKEDVYRAYKFSPNAQIVNVHMDTVNHGALSKAELRRFIEEKHLDKQRALVPDDGQLYKF
>NC_021661.1|WP_020443868.1|2147171_2147720_-|cysteine-hydrolase
MNKQALIVVDIQNEYFPEGKISLVGINEAADNAALVIASAREKGHTVIHVRHEMPSTDAPIFTPGTDGVEINEKVKPIEGEAVVVKHYPNSFRETSLKDLLDKESIKDVTVIGAMSHMCVDATVRAAVDFGYTTTTVHDACATLDLEFNGTTVLAAQAHATIMAAIEFLYGEVIDAQTWIAR
>NC_021661.1|WP_020443869.1|2147828_2148809_+|GlxA-family-transcriptional-regulator
MNQNHTIEIGLIVYEKAQMAAVLGLTDLLTVASKIAAKRQDTTDLPLQVSHWEIKDTNLLPTCTFSSNPDSVGKLAAVIIPPTLEAPIEQQAAAPWLDWLRDQHSAGVIMSSVCAGAFLLGETGLLSKRKATTHWGYVEQFEKRFPDIDLDVDRIIIEDGDIVTAGGAMAWTDLGLRMVDRFLGSQVMNETARALLIDPSRREQCYYSAFSPILTHGDAAILKVQHWLQQTDAQDIDLSTLANCAQLEERTFLRRFHKATGMTSTEYCQRLRIGEAKDFLQFSSSPVEQIAWKVGYSDASAFRKIFKRIVGLTPSEYRRRFNTNKE
>NC_021661.1|WP_020443870.1|2149042_2149237_-|heavy-metal-associated-domain-containing-protein
MKLLIVNMNCGGCARGVTATIHDIDPNAKVDIDLAAKVVNITTIANVEQMTAALEKDGFPAQVQ

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NC_021661_2	2.7\|2135689\|26\|NC_021661\|CRISPRCasFinder,PILER-CR	2135689-2135714	26	MK630230	Klebsiella phage Spivey, complete genome	106099-106124	4	0.846
NC_021661_2	2.7\|2135689\|26\|NC_021661\|CRISPRCasFinder,PILER-CR	2135689-2135714	26	MN163280	Klebsiella phage KpGranit, complete genome	14636-14661	4	0.846
NC_021661_2	2.7\|2135689\|26\|NC_021661\|CRISPRCasFinder,PILER-CR	2135689-2135714	26	MG459987	Klebsiella phage Sugarland, complete genome	15024-15049	4	0.846
NC_021661_2	2.7\|2135689\|26\|NC_021661\|CRISPRCasFinder,PILER-CR	2135689-2135714	26	MK521907	Klebsiella phage vB_KpnS_FZ41, complete genome	4560-4585	4	0.846
NC_021661_2	2.7\|2135689\|26\|NC_021661\|CRISPRCasFinder,PILER-CR	2135689-2135714	26	KX845404	Klebsiella phage vB_Kpn_IME260, complete genome	14624-14649	4	0.846
NC_021661_2	2.5\|2135569\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135569-2135600	32	NC_010632	Nostoc punctiforme PCC 73102 plasmid pNPUN02, complete sequence	194852-194883	7	0.781
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	MK630230	Klebsiella phage Spivey, complete genome	106093-106124	7	0.781
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	MK521907	Klebsiella phage vB_KpnS_FZ41, complete genome	4560-4591	7	0.781
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	KX845404	Klebsiella phage vB_Kpn_IME260, complete genome	14624-14655	7	0.781
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_CP022495	Salmonella enterica subsp. enterica serovar Derby strain SA20035215 plasmid unnamed1, complete sequence	233838-233869	8	0.75
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_KX832927	Providencia rettgeri strain 16pre36 plasmid p16Pre36-NDM, complete sequence	183453-183484	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_CP045446	Salmonella enterica subsp. enterica serovar Schwarzengrund strain 9355 plasmid p280_9355, complete sequence	229792-229823	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_LT904879	Salmonella enterica subsp. enterica serovar Typhi strain ty3-193 genome assembly, plasmid: 2	2596-2627	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_KU355873	Escherichia coli strain FAM22871 plasmid pFAM22871_1, complete sequence	124675-124706	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NC_015965	Salmonella enterica subsp. enterica serovar Typhimurium plasmid R621a, complete sequence	27979-28010	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_KM406488	Salmonella enterica subsp. enterica serovar Paratyphi B strain R69 plasmid R69, complete sequence	76249-76280	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_CP010141	Escherichia coli strain D3 plasmid A, complete sequence	14207-14238	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_CP010141	Escherichia coli strain D3 plasmid A, complete sequence	24401-24432	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_CP010373	Escherichia coli strain 6409 plasmid p6409-202.186kb, complete sequence	91555-91586	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_CP044256	Salmonella enterica strain CFSAN096147 plasmid pCFSAN096147, complete sequence	240365-240396	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_CP045449	Salmonella enterica subsp. enterica serovar Schwarzengrund strain 12888 plasmid p280_12888, complete sequence	229791-229822	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NC_009981	Salmonella enterica subsp. enterica serovar Choleraesuis plasmid pMAK1, complete sequence	73865-73896	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_CP021087	Escherichia coli strain 13P460A plasmid p13P460A-2, complete sequence	58619-58650	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_CP029645	Salmonella enterica subsp. enterica serovar Typhi strain 311189_217186 plasmid pHCM1, complete sequence	165710-165741	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	59336-59367	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_CP019559	Escherichia coli strain KSC207 plasmid pMRGN207, complete sequence	125491-125522	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_CP039717	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS000211 plasmid p10-3184.1, complete sequence	233082-233113	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	KP899804	Salmonella enterica strain F8475 plasmid pF8475, complete sequence	39417-39448	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	KP899805	Salmonella enterica strain 109/9 plasmid p109/9, complete sequence	30411-30442	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	KP899806	Salmonella enterica strain B71 plasmid pB71, complete sequence	18364-18395	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_CP037875	Salmonella enterica subsp. enterica serovar 4,[5],12:i:- strain PNCS015054 plasmid pPNCS015054_S2, complete sequence	25167-25198	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_CP018652	Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1705 plasmid pSE81-1705-1, complete sequence	91784-91815	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_CP019251	Escherichia coli strain 13KWH46 plasmid p13KWH46-1, complete sequence	27947-27978	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NC_025127	Vibrio sp. 04Ya090 plasmid pAQU2 DNA, complete sequence	119930-119961	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_CP019268	Escherichia coli strain 13C1079T plasmid p13C1079T-1, complete sequence	16479-16510	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NC_018998	Escherichia coli F18+ plasmid pTC1, complete sequence	37486-37517	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NC_003384	Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid pHCM1, complete sequence	181813-181844	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_CP025277	Salmonella enterica subsp. enterica strain USDA-ARS-USMARC-60984 plasmid pSJO-60984, complete sequence	202391-202422	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_CP030182	Salmonella enterica strain SA20030575 plasmid pSA20030575.1, complete sequence	89476-89507	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_CP030329	Escherichia coli strain AR_452 plasmid unnamed1, complete sequence	64040-64071	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_CP039559	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014846 plasmid p08-4425.1, complete sequence	231234-231265	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_CP024652	Escherichia coli strain BH100 substr. MG2014 plasmid pBH100-1, complete sequence	34012-34043	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	CP031284	Escherichia fergusonii strain 40A plasmid p280_40A, complete sequence	157672-157703	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	MK492260	Escherichia coli strain MG1655 K12 plasmid F-Tn10, complete sequence	21443-21474	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	LC081338	Vibrio sp. 04Ya108 plasmid pSEA1 DNA, complete genome	205093-205124	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_CP040928	Escherichia coli strain YY76-1 plasmid pYY76-1-1, complete sequence	75421-75452	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NC_008690	Vibrio sp. TC68 plasmid pTC68, complete sequence	7665-7696	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NC_024960	Escherichia coli plasmid pIS04_68, strain ISO4, complete sequence	17803-17834	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NC_005014	Salmonella enterica subsp. enterica serovar Typhimurium plasmid R64, complete sequence	15389-15420	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_CP017221	Escherichia coli strain FAM21845 plasmid pFAM21845_1, complete sequence	20552-20583	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_LT985319	Escherichia coli strain ECOR 30 genome assembly, plasmid: RCS96_pII	54029-54060	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_CP042866	Escherichia coli strain ATCC BAA-196 plasmid unnamed1, complete sequence	71314-71345	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NC_009139	Yersinia ruckeri YR71 plasmid pYR1, complete sequence	133432-133463	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NC_023911	Raoultella planticola strain KpNDM1 plasmid pKpNDM1, complete sequence	38176-38207	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_CP013027	Escherichia coli strain 2009C-3133 plasmid unnamed3, complete sequence	134316-134347	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_CP030921	Escherichia coli strain KL53 plasmid pKL53-M, complete sequence	6579-6610	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NC_019122	Salmonella enterica subsp. enterica serovar Heidelberg plasmid pSH163_120, complete sequence	103853-103884	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_CP025751	Escherichia coli strain CV839-06 plasmid pCV839-06-p1, complete sequence	22660-22691	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_CP024254	Escherichia coli strain ATCC 43886 plasmid unnamed1, complete sequence	22251-22282	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	CP043758	Escherichia coli strain CVM N55972 plasmid pN55972-2, complete sequence	529-560	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_CP024129	Escherichia coli strain 14EC001 plasmid p14EC001b, complete sequence	56142-56173	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NC_002305	Salmonella typhi plasmid R27, complete sequence	76681-76712	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	CP022610	Escherichia coli strain ATCC 700415 plasmid unnamed, complete sequence	112141-112172	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_CP012931	Salmonella enterica subsp. enterica serovar Heidelberg strain N13-01290 plasmid pN13-01290_23, complete sequence	22326-22357	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_CP029895	Salmonella enterica subsp. enterica serovar Typhi strain 311189_252186 plasmid pHCM1, complete sequence	166031-166062	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_CP029877	Salmonella enterica subsp. enterica serovar Typhi strain 311189_224186 plasmid pHCM1, complete sequence	165829-165860	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NC_005211	Serratia marcescens plasmid R478, complete sequence	209226-209257	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_CP018961	Escherichia coli strain Ecol_422 plasmid pEC422_1, complete sequence	17858-17889	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_CP023959	Escherichia coli strain FDAARGOS_448 plasmid unnamed1, complete sequence	80035-80066	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NC_002134	Shigella flexneri 2b plasmid R100 DNA, complete sequence	38834-38865	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NC_016983	Photobacterium damselae subsp. damselae plasmid pAQU1, complete sequence	163323-163354	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	LT905061	Salmonella enterica subsp. enterica serovar Typhi isolate ISP_03_07467_SGB110-sc-1979083 genome assembly, plasmid: 2	53360-53391	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_CP029248	Enterobacter hormaechei subsp. xiangfangensis strain OSUVMCKPC4-2 plasmid pOSUEC_D, complete sequence	127742-127773	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_CP029926	Salmonella enterica subsp. enterica serovar Typhi strain 311189_218186 plasmid pHCM1, complete sequence	107958-107989	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_CP029947	Salmonella enterica subsp. enterica serovar Typhi strain 311189_210186 plasmid pHCM1, complete sequence	167374-167405	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	CP051274	Salmonella enterica subsp. enterica serovar Worthington strain OLF-FSR1_WB_Partridge_SW-37 plasmid pSW37-267109, complete sequence	69541-69572	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NC_009133	Escherichia coli plasmid NR1, complete sequence	38834-38865	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_CP044968	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS007098 plasmid pPNCS014881.1, complete sequence	82867-82898	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_CP044958	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS007087 plasmid pPNCS007087.1, complete sequence	15091-15122	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_CP029979	Escherichia coli strain 99-3165 plasmid unnamed1	8408-8439	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NC_011743	Escherichia fergusonii ATCC 35469 plasmid pEFER, complete sequence	44952-44983	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	CP051271	Salmonella enterica subsp. enterica serovar Worthington strain OLF-FSR1_WB_Quail_SW-70 plasmid pSW37-267106, complete sequence	52929-52960	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	KX957968	Vibrio alginolyticus plasmid pVAS19, complete sequence	102524-102555	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_CP029943	Salmonella enterica subsp. enterica serovar Typhi strain 311189_212186 plasmid pHCM1, complete sequence	165818-165849	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_CP029953	Salmonella enterica subsp. enterica serovar Typhi strain 311189_204186 plasmid pHCM1, complete sequence	166141-166172	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_CP029955	Salmonella enterica subsp. enterica serovar Typhi strain 311189_202186 plasmid pHCM1, complete sequence	166086-166117	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_CP022495	Salmonella enterica subsp. enterica serovar Derby strain SA20035215 plasmid unnamed1, complete sequence	18752-18783	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_CP025139	Escherichia coli strain BH100L substr. MG2017 plasmid pBH100alpha, complete sequence	38936-38967	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_LR740759	Escherichia coli strain BEN5202 isolate laying hen 51 weeks old plasmid paAPEC5202	82046-82077	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_CP029924	Salmonella enterica subsp. enterica serovar Typhi strain 311189_221186 plasmid pHCM1, complete sequence	32693-32724	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_CP029934	Salmonella enterica subsp. enterica serovar Typhi strain 311189_214186 plasmid pHCM1, complete sequence	165829-165860	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NC_019117	Salmonella enterica subsp. enterica serovar Heidelberg plasmid pSH696_117, complete sequence	100473-100504	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_CP029744	Escherichia coli strain AR_0085 plasmid unnamed3, complete sequence	83633-83664	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	CP052139	Klebsiella pneumoniae strain F17KP0040 plasmid pF17KP0040-1, complete sequence	31057-31088	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_CP022673	Shigella sonnei strain 866 plasmid p866, complete sequence	68749-68780	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NC_013365	Escherichia coli O111:H- str. 11128 plasmid pO111_1, complete sequence	93994-94025	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_CP015836	Escherichia coli strain MS6198 plasmid pMS6198B, complete sequence	33427-33458	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_CP021699	Klebsiella pneumoniae strain AR_0158 plasmid tig00000727, complete sequence	137772-137803	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_CP029939	Salmonella enterica subsp. enterica serovar Typhi strain 311189_206186 plasmid pHCM1, complete sequence	164539-164570	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NC_018954	Salmonella enterica subsp. enterica serovar Kentucky plasmid pCS0010A, complete sequence	12359-12390	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NC_018966	Salmonella enterica subsp. enterica serovar Kentucky plasmid pSSAP03302A, complete sequence	12359-12390	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_CP029957	Salmonella enterica subsp. enterica serovar Typhi strain 311189_201186 plasmid pHCM1, complete sequence	165594-165625	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_CP029941	Salmonella enterica subsp. enterica serovar Typhi strain 311189_203186 plasmid pHCM1, complete sequence	165921-165952	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_CP029910	Salmonella enterica subsp. enterica serovar Typhi strain 311189_219186 plasmid pHCM1, complete sequence	165829-165860	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_AP018352	Enterobacter hormaechei strain TUM11043 plasmid pMTY11043_IncHI2, complete sequence	77319-77350	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NC_011812	Escherichia coli plasmid pO26-L, complete sequence	15558-15589	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_CP029887	Salmonella enterica subsp. enterica serovar Typhi strain 311189_220186 plasmid pHCM1, complete sequence	165655-165686	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_CP029948	Salmonella enterica subsp. enterica serovar Typhi strain 311189_208186 plasmid pHCM1, complete sequence	166031-166062	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_CP029937	Salmonella enterica subsp. enterica serovar Typhi strain 311189_207186 plasmid pHCM1, complete sequence	165557-165588	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_CP029879	Salmonella enterica subsp. enterica serovar Typhi strain 311189_223186 plasmid pHCM1, complete sequence	163343-163374	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_CP025253	Escherichia coli strain BH100 substr. MG2017 plasmid pBH100-1, complete sequence	34016-34047	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	MH114596	Salmonella enterica strain 13-1681 plasmid p131681, complete sequence	139589-139620	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_CP024910	Enterobacter hormaechei subsp. xiangfangensis strain OSUKPC4_L plasmid pOSUKPC4, complete sequence	126517-126548	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_CP018656	Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1706 plasmid pSE81-1706, complete sequence	157673-157704	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NC_016825	Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12 plasmid unnamed, complete sequence	147067-147098	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_CP029931	Salmonella enterica subsp. enterica serovar Typhi strain 311189_215186 plasmid pHCM1, complete sequence	165662-165693	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_CP029935	Salmonella enterica subsp. enterica serovar Typhi strain 311189_213186 plasmid pHCM1, complete sequence	165446-165477	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_CP044051	Klebsiella variicola strain FDAARGOS_627 plasmid unnamed2, complete sequence	65299-65330	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_CP025254	Escherichia coli strain BH100L substr. MG2014 plasmid pBH100alpha, complete sequence	34010-34041	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_CP014320	Escherichia coli JJ1887 plasmid pJJ1887-5, complete sequence	59640-59671	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_LT985304	Escherichia coli strain ECOR 31 plasmid RCS89_p, complete sequence	89206-89237	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_LT985296	Escherichia coli strain 1454 plasmid RCS78_p, complete sequence	235119-235150	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_CP026934	Escherichia coli strain CFS3273 plasmid pCFS3273-2, complete sequence	39943-39974	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_MK291500	Escherichia coli strain 15978 plasmid pHN15978-1, complete sequence	80036-80067	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_MK878891	Escherichia coli strain J53 plasmid pMG336, complete sequence	63562-63593	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_MK878890	Escherichia coli strain J53 plasmid pMG337, complete sequence	64019-64050	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_MK758104	Escherichia coli strain 0126:B16 plasmid R16, complete sequence	16590-16621	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_MK413722	Klebsiella pneumoniae strain 332306 plasmid p332306-HI3, complete sequence	301072-301103	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_CP018299	Photobacterium damselae strain Phdp Wu-1 plasmid plas1, complete sequence	112917-112948	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_MH105051	Salmonella enterica subsp. enterica serovar Lomita strain SL131 plasmid pSL131_IncHI2, complete sequence	103723-103754	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_MH422552	Escherichia coli strain L-I1 plasmid pIncFIB, complete sequence	49690-49721	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_MH626558	Salmonella enterica subsp. enterica serovar Typhimurium strain ST1007 plasmid pST1007-1B, complete sequence	91709-91740	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_MH760469	Salmonella enterica strain 2016K-0796 plasmid p2016K-0796, complete sequence	140370-140401	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_MK169211	Escherichia coli strain DUK14-2 plasmid pMOO-32, complete sequence	174558-174589	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_CP006635	Escherichia coli PCN033 plasmid p3PCN033, complete sequence	157540-157571	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_MG904992	Escherichia coli strain 14OD0056 plasmid p14ODMR, complete sequence	123501-123532	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_MF174860	Escherichia coli strain 6/14/6b plasmid pIncF-MU4, complete sequence	60817-60848	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_MF344581	Enterobacter cloacae strain 13E573 plasmid p13E573-HI2, complete sequence	190356-190387	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_MH202955	Escherichia coli strain HXH-1 plasmid pHXH-1, complete sequence	41610-41641	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_MG948335	Escherichia coli strain 3498 plasmid p3498, complete sequence	132184-132215	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NC_023277	Escherichia coli strain 63743 plasmid pEQ2, complete sequence	100786-100817	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NC_023289	Escherichia coli strain T23 plasmid pEQ1, complete sequence	100835-100866	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	NZ_CP044190	Salmonella enterica subsp. enterica strain AR-0401 plasmid pAR-0401-2, complete sequence	150-181	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	MN163280	Klebsiella phage KpGranit, complete genome	14636-14667	9	0.719
NC_021661_2	2.8\|2135743\|32\|NC_021661\|CRISPRCasFinder,PILER-CR	2135743-2135774	32	MG459987	Klebsiella phage Sugarland, complete genome	15024-15055	9	0.719

1. spacer 2.7|2135689|26|NC_021661|CRISPRCasFinder,PILER-CR matches to MK630230 (Klebsiella phage Spivey, complete genome) position: , mismatch: 4, identity: 0.846

atcagctcatcacgttcttcgtttac	CRISPR spacer
ctcagctcaacacgttcttcgtctag	Protospacer
 ******** ************.**

2. spacer 2.7|2135689|26|NC_021661|CRISPRCasFinder,PILER-CR matches to MN163280 (Klebsiella phage KpGranit, complete genome) position: , mismatch: 4, identity: 0.846

atcagctcatcacgttcttcgtttac	CRISPR spacer
ctcagctcaacacgttcttcgtctag	Protospacer
 ******** ************.**

3. spacer 2.7|2135689|26|NC_021661|CRISPRCasFinder,PILER-CR matches to MG459987 (Klebsiella phage Sugarland, complete genome) position: , mismatch: 4, identity: 0.846

atcagctcatcacgttcttcgtttac	CRISPR spacer
ctcagctcaacacgttcttcgtctag	Protospacer
 ******** ************.**

4. spacer 2.7|2135689|26|NC_021661|CRISPRCasFinder,PILER-CR matches to MK521907 (Klebsiella phage vB_KpnS_FZ41, complete genome) position: , mismatch: 4, identity: 0.846

atcagctcatcacgttcttcgtttac	CRISPR spacer
ctcagctcaacacgttcttcgtctaa	Protospacer
 ******** ************.**

5. spacer 2.7|2135689|26|NC_021661|CRISPRCasFinder,PILER-CR matches to KX845404 (Klebsiella phage vB_Kpn_IME260, complete genome) position: , mismatch: 4, identity: 0.846

atcagctcatcacgttcttcgtttac	CRISPR spacer
ctcagctcaacacgttcttcgtctag	Protospacer
 ******** ************.**

6. spacer 2.5|2135569|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NC_010632 (Nostoc punctiforme PCC 73102 plasmid pNPUN02, complete sequence) position: , mismatch: 7, identity: 0.781

--gccatcggtcaatagctactggaaaagaaaca	CRISPR spacer
cagtaat--atcaattgctactggaaacgaaaca	Protospacer
  *. **  .***** *********** ******

7. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to MK630230 (Klebsiella phage Spivey, complete genome) position: , mismatch: 7, identity: 0.781

atcagctcatcacgttcttcgttta-cttttgc	CRISPR spacer
ctcagctcaacacgttcttcgtctagcgcctg-	Protospacer
 ******** ************.** * ..**

8. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to MK521907 (Klebsiella phage vB_KpnS_FZ41, complete genome) position: , mismatch: 7, identity: 0.781

atcagctcatcacgttcttcgttt-acttttgc	CRISPR spacer
ctcagctcaacacgttcttcgtctaacgcctg-	Protospacer
 ******** ************.* ** ..**

9. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to KX845404 (Klebsiella phage vB_Kpn_IME260, complete genome) position: , mismatch: 7, identity: 0.781

atcagctcatcacgttcttcgttta-cttttgc	CRISPR spacer
ctcagctcaacacgttcttcgtctagcgcctg-	Protospacer
 ******** ************.** * ..**

10. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_CP022495 (Salmonella enterica subsp. enterica serovar Derby strain SA20035215 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

--atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
tgataaa--aatcaggttattcgtttacttttga	Protospacer
  ** *.   **** *** **************

11. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_KX832927 (Providencia rettgeri strain 16pre36 plasmid p16Pre36-NDM, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

12. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_CP045446 (Salmonella enterica subsp. enterica serovar Schwarzengrund strain 9355 plasmid p280_9355, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

13. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_LT904879 (Salmonella enterica subsp. enterica serovar Typhi strain ty3-193 genome assembly, plasmid: 2) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

14. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_KU355873 (Escherichia coli strain FAM22871 plasmid pFAM22871_1, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

15. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NC_015965 (Salmonella enterica subsp. enterica serovar Typhimurium plasmid R621a, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

16. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_KM406488 (Salmonella enterica subsp. enterica serovar Paratyphi B strain R69 plasmid R69, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

17. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_CP010141 (Escherichia coli strain D3 plasmid A, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

18. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_CP010141 (Escherichia coli strain D3 plasmid A, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

19. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_CP010373 (Escherichia coli strain 6409 plasmid p6409-202.186kb, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

20. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_CP044256 (Salmonella enterica strain CFSAN096147 plasmid pCFSAN096147, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

21. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_CP045449 (Salmonella enterica subsp. enterica serovar Schwarzengrund strain 12888 plasmid p280_12888, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

22. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NC_009981 (Salmonella enterica subsp. enterica serovar Choleraesuis plasmid pMAK1, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

23. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_CP021087 (Escherichia coli strain 13P460A plasmid p13P460A-2, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

24. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_CP029645 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_217186 plasmid pHCM1, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

25. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

26. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_CP019559 (Escherichia coli strain KSC207 plasmid pMRGN207, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

27. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_CP039717 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS000211 plasmid p10-3184.1, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

28. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to KP899804 (Salmonella enterica strain F8475 plasmid pF8475, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

29. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to KP899805 (Salmonella enterica strain 109/9 plasmid p109/9, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

30. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to KP899806 (Salmonella enterica strain B71 plasmid pB71, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

31. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_CP037875 (Salmonella enterica subsp. enterica serovar 4,[5],12:i:- strain PNCS015054 plasmid pPNCS015054_S2, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

32. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_CP018652 (Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1705 plasmid pSE81-1705-1, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

33. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_CP019251 (Escherichia coli strain 13KWH46 plasmid p13KWH46-1, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

34. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NC_025127 (Vibrio sp. 04Ya090 plasmid pAQU2 DNA, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

35. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_CP019268 (Escherichia coli strain 13C1079T plasmid p13C1079T-1, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

36. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NC_018998 (Escherichia coli F18+ plasmid pTC1, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

37. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NC_003384 (Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid pHCM1, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

38. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_CP025277 (Salmonella enterica subsp. enterica strain USDA-ARS-USMARC-60984 plasmid pSJO-60984, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

39. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_CP030182 (Salmonella enterica strain SA20030575 plasmid pSA20030575.1, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

40. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_CP030329 (Escherichia coli strain AR_452 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

41. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_CP039559 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014846 plasmid p08-4425.1, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

42. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_CP024652 (Escherichia coli strain BH100 substr. MG2014 plasmid pBH100-1, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

43. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to CP031284 (Escherichia fergusonii strain 40A plasmid p280_40A, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

44. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to MK492260 (Escherichia coli strain MG1655 K12 plasmid F-Tn10, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

45. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to LC081338 (Vibrio sp. 04Ya108 plasmid pSEA1 DNA, complete genome) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

46. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_CP040928 (Escherichia coli strain YY76-1 plasmid pYY76-1-1, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

47. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NC_008690 (Vibrio sp. TC68 plasmid pTC68, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

48. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NC_024960 (Escherichia coli plasmid pIS04_68, strain ISO4, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

49. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NC_005014 (Salmonella enterica subsp. enterica serovar Typhimurium plasmid R64, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

50. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_CP017221 (Escherichia coli strain FAM21845 plasmid pFAM21845_1, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

51. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_LT985319 (Escherichia coli strain ECOR 30 genome assembly, plasmid: RCS96_pII) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

52. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_CP042866 (Escherichia coli strain ATCC BAA-196 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

53. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NC_009139 (Yersinia ruckeri YR71 plasmid pYR1, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

54. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NC_023911 (Raoultella planticola strain KpNDM1 plasmid pKpNDM1, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

55. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_CP013027 (Escherichia coli strain 2009C-3133 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

56. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_CP030921 (Escherichia coli strain KL53 plasmid pKL53-M, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

57. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NC_019122 (Salmonella enterica subsp. enterica serovar Heidelberg plasmid pSH163_120, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

58. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_CP025751 (Escherichia coli strain CV839-06 plasmid pCV839-06-p1, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

59. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_CP024254 (Escherichia coli strain ATCC 43886 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

60. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to CP043758 (Escherichia coli strain CVM N55972 plasmid pN55972-2, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

61. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_CP024129 (Escherichia coli strain 14EC001 plasmid p14EC001b, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

62. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NC_002305 (Salmonella typhi plasmid R27, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

63. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to CP022610 (Escherichia coli strain ATCC 700415 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

64. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_CP012931 (Salmonella enterica subsp. enterica serovar Heidelberg strain N13-01290 plasmid pN13-01290_23, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

65. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_CP029895 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_252186 plasmid pHCM1, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

66. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_CP029877 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_224186 plasmid pHCM1, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

67. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NC_005211 (Serratia marcescens plasmid R478, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

68. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_CP018961 (Escherichia coli strain Ecol_422 plasmid pEC422_1, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

69. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_CP023959 (Escherichia coli strain FDAARGOS_448 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

70. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NC_002134 (Shigella flexneri 2b plasmid R100 DNA, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

71. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NC_016983 (Photobacterium damselae subsp. damselae plasmid pAQU1, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

72. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to LT905061 (Salmonella enterica subsp. enterica serovar Typhi isolate ISP_03_07467_SGB110-sc-1979083 genome assembly, plasmid: 2) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

73. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_CP029248 (Enterobacter hormaechei subsp. xiangfangensis strain OSUVMCKPC4-2 plasmid pOSUEC_D, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

74. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_CP029926 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_218186 plasmid pHCM1, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

75. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_CP029947 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_210186 plasmid pHCM1, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

76. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to CP051274 (Salmonella enterica subsp. enterica serovar Worthington strain OLF-FSR1_WB_Partridge_SW-37 plasmid pSW37-267109, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

77. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NC_009133 (Escherichia coli plasmid NR1, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

78. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_CP044968 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS007098 plasmid pPNCS014881.1, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

79. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_CP044958 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS007087 plasmid pPNCS007087.1, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

80. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_CP029979 (Escherichia coli strain 99-3165 plasmid unnamed1) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

81. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NC_011743 (Escherichia fergusonii ATCC 35469 plasmid pEFER, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

82. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to CP051271 (Salmonella enterica subsp. enterica serovar Worthington strain OLF-FSR1_WB_Quail_SW-70 plasmid pSW37-267106, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

83. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to KX957968 (Vibrio alginolyticus plasmid pVAS19, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

84. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_CP029943 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_212186 plasmid pHCM1, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

85. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_CP029953 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_204186 plasmid pHCM1, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

86. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_CP029955 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_202186 plasmid pHCM1, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

87. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_CP022495 (Salmonella enterica subsp. enterica serovar Derby strain SA20035215 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

88. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_CP025139 (Escherichia coli strain BH100L substr. MG2017 plasmid pBH100alpha, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

89. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_LR740759 (Escherichia coli strain BEN5202 isolate laying hen 51 weeks old plasmid paAPEC5202) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

90. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_CP029924 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_221186 plasmid pHCM1, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

91. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_CP029934 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_214186 plasmid pHCM1, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

92. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NC_019117 (Salmonella enterica subsp. enterica serovar Heidelberg plasmid pSH696_117, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

93. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_CP029744 (Escherichia coli strain AR_0085 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

94. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to CP052139 (Klebsiella pneumoniae strain F17KP0040 plasmid pF17KP0040-1, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

95. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_CP022673 (Shigella sonnei strain 866 plasmid p866, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

96. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NC_013365 (Escherichia coli O111:H- str. 11128 plasmid pO111_1, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

97. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_CP015836 (Escherichia coli strain MS6198 plasmid pMS6198B, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

98. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_CP021699 (Klebsiella pneumoniae strain AR_0158 plasmid tig00000727, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

99. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_CP029939 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_206186 plasmid pHCM1, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

100. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NC_018954 (Salmonella enterica subsp. enterica serovar Kentucky plasmid pCS0010A, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

101. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NC_018966 (Salmonella enterica subsp. enterica serovar Kentucky plasmid pSSAP03302A, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

102. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_CP029957 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_201186 plasmid pHCM1, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

103. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_CP029941 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_203186 plasmid pHCM1, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

104. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_CP029910 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_219186 plasmid pHCM1, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

105. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_AP018352 (Enterobacter hormaechei strain TUM11043 plasmid pMTY11043_IncHI2, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

106. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NC_011812 (Escherichia coli plasmid pO26-L, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

107. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_CP029887 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_220186 plasmid pHCM1, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

108. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_CP029948 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_208186 plasmid pHCM1, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

109. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_CP029937 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_207186 plasmid pHCM1, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

110. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_CP029879 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_223186 plasmid pHCM1, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

111. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_CP025253 (Escherichia coli strain BH100 substr. MG2017 plasmid pBH100-1, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

112. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to MH114596 (Salmonella enterica strain 13-1681 plasmid p131681, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

113. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_CP024910 (Enterobacter hormaechei subsp. xiangfangensis strain OSUKPC4_L plasmid pOSUKPC4, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

114. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_CP018656 (Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1706 plasmid pSE81-1706, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

115. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NC_016825 (Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

116. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_CP029931 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_215186 plasmid pHCM1, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

117. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_CP029935 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_213186 plasmid pHCM1, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

118. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_CP044051 (Klebsiella variicola strain FDAARGOS_627 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

119. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_CP025254 (Escherichia coli strain BH100L substr. MG2014 plasmid pBH100alpha, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

120. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_CP014320 (Escherichia coli JJ1887 plasmid pJJ1887-5, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

121. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_LT985304 (Escherichia coli strain ECOR 31 plasmid RCS89_p, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

122. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_LT985296 (Escherichia coli strain 1454 plasmid RCS78_p, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

123. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_CP026934 (Escherichia coli strain CFS3273 plasmid pCFS3273-2, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

124. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_MK291500 (Escherichia coli strain 15978 plasmid pHN15978-1, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

125. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_MK878891 (Escherichia coli strain J53 plasmid pMG336, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

126. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_MK878890 (Escherichia coli strain J53 plasmid pMG337, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

127. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_MK758104 (Escherichia coli strain 0126:B16 plasmid R16, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

128. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_MK413722 (Klebsiella pneumoniae strain 332306 plasmid p332306-HI3, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

129. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_CP018299 (Photobacterium damselae strain Phdp Wu-1 plasmid plas1, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

130. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_MH105051 (Salmonella enterica subsp. enterica serovar Lomita strain SL131 plasmid pSL131_IncHI2, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

131. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_MH422552 (Escherichia coli strain L-I1 plasmid pIncFIB, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

132. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_MH626558 (Salmonella enterica subsp. enterica serovar Typhimurium strain ST1007 plasmid pST1007-1B, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

133. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_MH760469 (Salmonella enterica strain 2016K-0796 plasmid p2016K-0796, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

134. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_MK169211 (Escherichia coli strain DUK14-2 plasmid pMOO-32, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

135. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_CP006635 (Escherichia coli PCN033 plasmid p3PCN033, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

136. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_MG904992 (Escherichia coli strain 14OD0056 plasmid p14ODMR, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

137. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_MF174860 (Escherichia coli strain 6/14/6b plasmid pIncF-MU4, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

138. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_MF344581 (Enterobacter cloacae strain 13E573 plasmid p13E573-HI2, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

139. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_MH202955 (Escherichia coli strain HXH-1 plasmid pHXH-1, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

140. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_MG948335 (Escherichia coli strain 3498 plasmid p3498, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

141. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NC_023277 (Escherichia coli strain 63743 plasmid pEQ2, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

142. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NC_023289 (Escherichia coli strain T23 plasmid pEQ1, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

143. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to NZ_CP044190 (Salmonella enterica subsp. enterica strain AR-0401 plasmid pAR-0401-2, complete sequence) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
gataaaacatcaggttattcgtttacttttga	Protospacer
. .*.  ***** *** **************

144. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to MN163280 (Klebsiella phage KpGranit, complete genome) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
ctcagctcaacacgttcttcgtctagtgcctg	Protospacer
 ******** ************.** * ..

145. spacer 2.8|2135743|32|NC_021661|CRISPRCasFinder,PILER-CR matches to MG459987 (Klebsiella phage Sugarland, complete genome) position: , mismatch: 9, identity: 0.719

atcagctcatcacgttcttcgtttacttttgc	CRISPR spacer
ctcagctcaacacgttcttcgtctagtgcctg	Protospacer
 ******** ************.** * ..

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

724753 : 733026

Megavirus(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_020442898.1\|724753_726715_+	polysaccharide biosynthesis protein	K7Y9E1	Megavirus	9.6e-13	24.1
WP_020442899.1\|726780_728058_+	Vi polysaccharide biosynthesis UDP-N-acetylglucosamine C-6 dehydrogenase TviB	M1HYW7	Paramecium_bursaria_Chlorella_virus	1.1e-25	28.1
WP_020442900.1\|728081_729116_+	Vi polysaccharide biosynthesis UDP-N-acetylglucosaminuronic acid C-4 epimerase TviC	A0A2K9L4U8	Tupanvirus	3.0e-74	46.7
WP_020442901.1\|729134_730193_+	dTDP-glucose 4,6-dehydratase	A0A1D7XFE8	Escherichia_phage	5.6e-100	51.6
WP_020442902.1\|730192_731068_+	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	5.1e-107	65.9
WP_020442903.1\|731067_731922_+	WxcM-like domain-containing protein	NA	NA	NA	NA
WP_020442904.1\|731922_733026_+	DegT/DnrJ/EryC1/StrS family aminotransferase	E5ES42	Bathycoccus_sp._RCC1105_virus	1.8e-48	30.9

DBSCAN-SWA_2

737695 : 761057

Powai_lake_megavirus(28.57%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_144061745.1\|737695_738397_+\|transposase	transposase	NA	NA	NA	NA
WP_144061746.1\|738380_738527_+\|transposase	transposase	NA	NA	NA	NA
WP_020442909.1\|738658_739744_+	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_187289121.1\|739827_740280_+\|transposase	IS30 family transposase	NA	NA	NA	NA
WP_020442911.1\|740343_740493_+\|transposase	IS30 family transposase	NA	NA	NA	NA
WP_020442912.1\|740499_740814_+\|transposase	IS30 family transposase	Q9MBM9	Staphylococcus_prophage	8.6e-17	46.6
WP_020442913.1\|740907_741792_+	glycosyltransferase family 2 protein	NA	NA	NA	NA
WP_020442914.1\|742036_743170_+	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_020442915.1\|743179_743803_+	sugar transferase	NA	NA	NA	NA
WP_020442916.1\|743795_744461_+	acetyltransferase	NA	NA	NA	NA
WP_020442917.1\|744560_746516_+	asparagine synthase (glutamine-hydrolyzing)	A0A0N9QYX6	Chrysochromulina_ericina_virus	5.9e-31	30.1
WP_020442918.1\|746679_747882_+	DegT/DnrJ/EryC1/StrS aminotransferase family protein	A0A2K9L0G1	Tupanvirus	4.8e-100	45.9
WP_011512990.1\|748003_749455_+	capsule assembly Wzi family protein	NA	NA	NA	NA
WP_011512991.1\|749848_750745_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	A0A249XZQ2	Enterococcus_phage	4.8e-20	30.7
WP_011512992.1\|750849_751347_+	phosphate-starvation-inducible PsiE family protein	NA	NA	NA	NA
WP_020442919.1\|751477_752692_-	magnesium/cobalt transporter CorA	NA	NA	NA	NA
WP_011512994.1\|752753_753143_-	DUF2237 domain-containing protein	NA	NA	NA	NA
WP_020442920.1\|753636_754941_+	ATP phosphoribosyltransferase regulatory subunit	NA	NA	NA	NA
WP_011512996.1\|755124_756414_+	adenylosuccinate synthase	A0A160ER07	Powai_lake_megavirus	7.1e-65	34.7
WP_020442921.1\|756679_757096_+	DUF1311 domain-containing protein	NA	NA	NA	NA
WP_011512998.1\|757428_757860_+	nucleoside-diphosphate kinase	A0A167REB2	Powai_lake_megavirus	9.7e-19	39.7
WP_020442922.1\|758197_759427_+	23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	NA	NA	NA	NA
WP_020442923.1\|759749_761057_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	O80301	Enterobacteria_phage	1.5e-94	52.9

DBSCAN-SWA_3

2246609 : 2321204

uncultured_Caudovirales_phage(53.33%)

capsid,terminase,portal,coat,tRNA,tail,head,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_020443963.1\|2246609_2247392_-\|tRNA	tRNA pseudouridine(65) synthase TruC	NA	NA	NA	NA
WP_020443964.1\|2247803_2250584_+	phosphoenolpyruvate carboxylase	NA	NA	NA	NA
WP_041772292.1\|2250705_2251431_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_020443966.1\|2251772_2253062_+	C4-dicarboxylate ABC transporter	NA	NA	NA	NA
WP_020443967.1\|2253565_2254606_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
WP_187289114.1\|2254677_2255181_+	tripartite tricarboxylate transporter TctB family protein	NA	NA	NA	NA
WP_020443969.1\|2255186_2256689_+	tripartite tricarboxylate transporter permease	NA	NA	NA	NA
WP_020443970.1\|2256962_2257985_+	D-cysteine desulfhydrase family protein	NA	NA	NA	NA
WP_020443971.1\|2258575_2259100_+\|coat	spore coat protein U domain-containing protein	NA	NA	NA	NA
WP_041772294.1\|2259105_2259867_+	molecular chaperone	NA	NA	NA	NA
WP_020443973.1\|2259877_2262382_+	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA
WP_020443974.1\|2262381_2263368_+\|coat	spore coat protein U domain-containing protein	NA	NA	NA	NA
WP_011514153.1\|2263526_2264072_-	DUF3124 domain-containing protein	NA	NA	NA	NA
WP_011514154.1\|2264087_2264789_-	TrkA family potassium uptake protein	NA	NA	NA	NA
WP_020443976.1\|2264839_2266600_-	ATPase	NA	NA	NA	NA
WP_187289115.1\|2266891_2267044_+	hypothetical protein	NA	NA	NA	NA
WP_020443977.1\|2267195_2267936_-	DUF305 domain-containing protein	A0A218MND9	uncultured_virus	3.3e-43	45.2
WP_020443978.1\|2267995_2268640_-	DUF411 domain-containing protein	NA	NA	NA	NA
WP_020443979.1\|2268768_2269719_-	DMT family transporter	NA	NA	NA	NA
WP_020443980.1\|2269762_2270251_-	M48 family metallopeptidase	NA	NA	NA	NA
WP_011514160.1\|2270833_2271163_+	hypothetical protein	NA	NA	NA	NA
WP_020443981.1\|2271366_2272098_+	hypothetical protein	NA	NA	NA	NA
WP_020443982.1\|2272926_2273934_-\|portal	phage portal protein	A0A2H4JCD2	uncultured_Caudovirales_phage	7.4e-110	58.6
WP_020443983.1\|2273930_2275733_-\|terminase	terminase	A0A2H4J8R1	uncultured_Caudovirales_phage	3.8e-173	53.3
WP_020443984.1\|2275899_2276805_+\|capsid	GPO family capsid scaffolding protein	A0A2H4J928	uncultured_Caudovirales_phage	1.1e-27	33.4
WP_020443985.1\|2276867_2277869_+\|capsid	P2 family phage major capsid protein	E5FFI6	Burkholderia_phage	1.7e-61	38.8
WP_187289116.1\|2277871_2278609_+	hypothetical protein	A0A2H4JAI1	uncultured_Caudovirales_phage	3.3e-35	38.4
WP_020443987.1\|2278712_2279153_+\|head	head completion/stabilization protein	A0A2H4JFX3	uncultured_Caudovirales_phage	1.1e-14	37.0
WP_020443988.1\|2279149_2279374_+\|tail	tail protein X	NA	NA	NA	NA
WP_020443989.1\|2279377_2279839_+	hypothetical protein	NA	NA	NA	NA
WP_020443990.1\|2279835_2280165_+	hypothetical protein	NA	NA	NA	NA
WP_020443991.1\|2280167_2280758_+	N-acetylmuramidase family protein	M4SQ91	Psychrobacter_phage	1.7e-45	51.3
WP_020443992.1\|2280754_2281162_+\|tail	phage tail protein	NA	NA	NA	NA
WP_020443993.1\|2281158_2281599_+	phage virion morphogenesis protein	R4JJX8	Burkholderia_phage	2.9e-10	28.8
WP_084674199.1\|2281605_2281809_+	Com family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_020443994.1\|2281768_2282629_+	DNA adenine methylase	A0A0R6PH56	Moraxella_phage	2.0e-87	54.9
WP_187289117.1\|2282699_2283260_+\|plate	phage baseplate assembly protein V	A0A2H4JGB7	uncultured_Caudovirales_phage	1.9e-27	37.8
WP_144061807.1\|2283277_2283622_+	GPW/gp25 family protein	A0A2H4JE52	uncultured_Caudovirales_phage	3.4e-22	56.5
WP_020443997.1\|2283618_2284563_+\|plate	baseplate J/gp47 family protein	Q19UQ5	Mannheimia_phage	5.2e-41	35.9
WP_020443998.1\|2284555_2285083_+\|tail	phage tail protein I	A0A2H4JAU2	uncultured_Caudovirales_phage	2.0e-26	34.5
WP_020443999.1\|2285092_2285581_+	hypothetical protein	NA	NA	NA	NA
WP_020444000.1\|2285629_2288224_+\|tail	phage tail protein	A0A1S6KZZ8	Salmonella_phage	1.7e-12	36.4
WP_020444001.1\|2288256_2289180_+	hypothetical protein	A4PE49	Ralstonia_virus	1.2e-18	35.7
WP_020444002.1\|2289224_2289830_+\|tail	tail sheath protein	A0A2H4J8M7	uncultured_Caudovirales_phage	3.2e-68	65.4
WP_020444003.1\|2289863_2290379_+\|tail	phage major tail tube protein	A0A2H4JCA8	uncultured_Caudovirales_phage	5.0e-38	43.7
WP_084674214.1\|2290669_2291068_+\|tail	phage tail assembly protein	A0A2H4J8P1	uncultured_Caudovirales_phage	3.2e-16	50.6
WP_084674213.1\|2291076_2291193_+\|tail	GpE family phage tail protein	NA	NA	NA	NA
WP_041772612.1\|2291215_2293951_+\|tail	phage tail tape measure protein	Q8H9M4	Vibrio_phage	2.3e-44	28.1
WP_041772297.1\|2293950_2294385_+\|tail	phage tail protein	A0A2H4J8N8	uncultured_Caudovirales_phage	4.7e-37	54.7
WP_041772298.1\|2294386_2295406_+	hypothetical protein	A0A2H4JAG0	uncultured_Caudovirales_phage	1.4e-84	48.2
WP_020444009.1\|2295408_2296008_-	hypothetical protein	NA	NA	NA	NA
WP_020444010.1\|2296162_2296804_+	DUF4760 domain-containing protein	NA	NA	NA	NA
WP_020444012.1\|2297302_2297575_-	hypothetical protein	NA	NA	NA	NA
WP_020444013.1\|2297695_2298358_-	hypothetical protein	NA	NA	NA	NA
WP_020444014.1\|2298384_2298999_-	hypothetical protein	NA	NA	NA	NA
WP_020444015.1\|2299098_2299311_+	hypothetical protein	NA	NA	NA	NA
WP_144061775.1\|2299317_2299545_-	hypothetical protein	NA	NA	NA	NA
WP_020444017.1\|2299578_2299935_-	helix-turn-helix transcriptional regulator	K4NXA8	Burkholderia_phage	3.2e-07	38.8
WP_020444018.1\|2300037_2300247_+	hypothetical protein	NA	NA	NA	NA
WP_020444019.1\|2300236_2300506_+	hypothetical protein	NA	NA	NA	NA
WP_020444020.1\|2300520_2301099_+	hypothetical protein	NA	NA	NA	NA
WP_051130947.1\|2301164_2302001_+	hypothetical protein	A0A2H4J0P1	uncultured_Caudovirales_phage	9.6e-31	44.7
WP_020444021.1\|2301990_2302185_+	hypothetical protein	NA	NA	NA	NA
WP_020444022.1\|2302177_2302507_+	hypothetical protein	NA	NA	NA	NA
WP_084674200.1\|2302603_2302822_+	ogr/Delta-like zinc finger family protein	NA	NA	NA	NA
WP_020444024.1\|2302833_2303181_+	hypothetical protein	NA	NA	NA	NA
WP_020444025.1\|2303208_2305875_+	toprim domain-containing protein	A0A2H4JDT6	uncultured_Caudovirales_phage	9.3e-245	47.0
WP_020444026.1\|2305878_2306118_+	hypothetical protein	NA	NA	NA	NA
WP_020444027.1\|2306122_2306320_+	TraR/DksA C4-type zinc finger protein	NA	NA	NA	NA
WP_020444028.1\|2306517_2307687_+	DUF3596 domain-containing protein	A0A2H4JGM5	uncultured_Caudovirales_phage	1.0e-62	36.1
WP_187289142.1\|2308092_2309181_-	aldehyde dehydrogenase	NA	NA	NA	NA
WP_020444030.1\|2309569_2311510_-	AAA family ATPase	A0A172Q090	Acinetobacter_phage	4.6e-68	34.8
WP_020444031.1\|2311789_2313316_+	aldehyde dehydrogenase family protein	NA	NA	NA	NA
WP_020444032.1\|2313425_2313752_+	DUF779 domain-containing protein	NA	NA	NA	NA
WP_020444033.1\|2313957_2315601_+	GMC family oxidoreductase N-terminal domain-containing protein	A0A1V0S9J5	Catovirus	2.8e-58	30.5
WP_020444034.1\|2315649_2316666_-	NERD domain-containing protein	A0A2R2ZH57	Clostridioides_phage	1.6e-16	33.5
WP_020444035.1\|2316923_2317526_+	YceI family protein	NA	NA	NA	NA
WP_020444036.1\|2317607_2319605_-	transketolase	NA	NA	NA	NA
WP_041772620.1\|2319917_2321204_-\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	2.0e-91	53.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NC_021668

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NC_021669

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. NC_021661

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection