CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NC_021741	Serratia liquefaciens ATCC 27592, complete sequence	0 crisprs	DEDDh,DinG,csa3,cas3,WYL	0	0	7	0
NC_021742	Serratia liquefaciens ATCC 27592 plasmid unnamed, complete sequence	0 crisprs	NA	0	0	0	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1858199 : 1896723

Salmonella_phage(23.33%)

lysis,portal,terminase,holin,integrase,coat

attL 1861658:1861674|attR 1900259:1900275

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_020826250.1\|1858199_1860140_-	MacB family efflux pump subunit	G9BWD6	Planktothrix_phage	1.1e-34	38.5
WP_020826251.1\|1860136_1861321_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
1861658:1861674	attL	NA	NA	NA	NA
WP_020826252.1\|1861830_1862997_+\|integrase	tyrosine-type recombinase/integrase	Q7M297	Enterobacteria_phage	1.9e-109	48.7
WP_020826253.1\|1862993_1863182_-	AlpA family phage regulatory protein	NA	NA	NA	NA
WP_020826254.1\|1863178_1864573_-	DEAD/DEAH box helicase	Q3LZN8	Bacteriophage	1.1e-215	76.3
WP_020826255.1\|1864580_1865213_-	HNH endonuclease	A0A2I7RAW6	Vibrio_phage	1.4e-05	63.6
WP_020826256.1\|1865209_1865440_-	hypothetical protein	A0A2H4JCC5	uncultured_Caudovirales_phage	1.2e-07	41.3
WP_081667727.1\|1865490_1866255_-	phage antirepressor KilAC domain-containing protein	Q71TC0	Escherichia_phage	4.8e-37	46.2
WP_020826258.1\|1866331_1866502_-	hypothetical protein	NA	NA	NA	NA
WP_041414414.1\|1866631_1867027_+	Arc family DNA-binding protein	NA	NA	NA	NA
WP_020826260.1\|1867023_1867164_-	Arc family DNA-binding protein	NA	NA	NA	NA
WP_020826261.1\|1867160_1867430_-	VRR-NUC domain-containing protein	B6SD64	Bacteriophage	1.3e-26	62.9
WP_020826262.1\|1867434_1869543_-	DNA polymerase	Q775A3	Bordetella_phage	9.9e-266	65.5
WP_020826263.1\|1869644_1869863_+	hypothetical protein	NA	NA	NA	NA
WP_020826264.1\|1869864_1870734_-	hypothetical protein	K4F991	Cronobacter_phage	4.0e-104	80.8
WP_020826266.1\|1870975_1871524_-	DUF2815 family protein	Q775A5	Bordetella_phage	2.5e-67	67.6
WP_020826267.1\|1871536_1872850_-	DUF2800 domain-containing protein	B6SCX9	Bacteriophage	7.3e-134	56.4
WP_020826268.1\|1872853_1873786_-	hypothetical protein	NA	NA	NA	NA
WP_020826269.1\|1874284_1874467_-	hypothetical protein	NA	NA	NA	NA
WP_020826270.1\|1874491_1874689_-	hypothetical protein	NA	NA	NA	NA
WP_020826271.1\|1874968_1875637_-	helix-turn-helix domain-containing protein	Q9T1U7	Acyrthosiphon_pisum_secondary_endosymbiont_phage	6.9e-56	48.3
WP_020826272.1\|1875770_1875971_+	transcriptional regulator	K7ST61	Bacteriophage	1.0e-07	46.7
WP_020826273.1\|1875974_1878131_+	bifunctional DNA primase/polymerase	B6SD37	Bacteriophage	2.4e-166	69.7
WP_020826275.1\|1879304_1879667_+	DUF4406 domain-containing protein	A0A222YYT7	Escherichia_phage	1.1e-26	56.6
WP_041414418.1\|1879641_1879995_+\|holin	phage holin, lambda family	Q8SBE1	Shigella_phage	1.7e-29	53.2
WP_020826277.1\|1880000_1880612_+	glycoside hydrolase family 19 protein	A0A192Y6G4	Salmonella_phage	3.2e-60	58.4
WP_041414420.1\|1880608_1881070_+\|lysis	lysis protein	M1FJ79	Enterobacteria_phage	1.8e-18	42.3
WP_020826279.1\|1881066_1881432_+	hypothetical protein	A0AR14	Salmonella_phage	1.1e-36	68.3
WP_020826280.1\|1881501_1881726_+	DUF2560 family protein	NA	NA	NA	NA
WP_020826281.1\|1881734_1882268_+	hypothetical protein	A0A192Y6U9	Salmonella_phage	3.5e-10	31.0
WP_020826282.1\|1882299_1882860_+\|terminase	terminase small subunit	A0A1W6JNT5	Morganella_phage	2.2e-55	64.7
WP_020826283.1\|1882840_1884346_+	DNA packaging protein	E7C9T5	Salmonella_phage	4.4e-260	83.1
WP_041415301.1\|1884349_1886527_+\|portal	portal protein	A0A2D1GLJ6	Escherichia_phage	1.8e-307	78.4
WP_020826285.1\|1886541_1887453_+	scaffold protein	A0A0M3ULI9	Salmonella_phage	9.3e-120	75.6
WP_020826286.1\|1887452_1888742_+\|coat	coat protein	A0A2D1GLV2	Escherichia_phage	1.2e-189	74.9
WP_020826288.1\|1889090_1889594_+	packaged DNA stabilization protein p27	A0A2D1GLR5	Escherichia_phage	7.3e-50	63.6
WP_020826289.1\|1889571_1890993_+	Packaged DNA stabilization protein gp10	I1TEJ1	Salmonella_phage	5.2e-202	68.9
WP_020826290.1\|1890992_1891799_+	hypothetical protein	Q9AYZ3	Salmonella_phage	2.6e-41	41.5
WP_020826292.1\|1892180_1892846_+	hypothetical protein	A0A0A0P253	Enterobacteria_phage	3.5e-44	48.8
WP_020826293.1\|1892845_1894036_+	phage DNA ejection protein	NA	NA	NA	NA
WP_020826294.1\|1894035_1896723_+	lytic transglycosylase domain-containing protein	A0A2D1GLK8	Escherichia_phage	2.0e-98	33.5
1900259:1900275	attR	NA	NA	NA	NA

DBSCAN-SWA_2

2145452 : 2166502

Moraxella_phage(100.0%)

protease,coat

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_041414489.1\|2145452_2146883_+\|protease	serralysin family metalloprotease	NA	NA	NA	NA
WP_041414492.1\|2147033_2147243_-	hypothetical protein	NA	NA	NA	NA
WP_017892602.1\|2147609_2147747_-	hypothetical protein	NA	NA	NA	NA
WP_020826536.1\|2148201_2148594_+	ASCH domain-containing protein	NA	NA	NA	NA
WP_020826537.1\|2148595_2149198_+	hypothetical protein	NA	NA	NA	NA
WP_020826538.1\|2149252_2149492_-	YebV family protein	NA	NA	NA	NA
WP_020826539.1\|2149628_2150561_-\|coat	spore coat U domain-containing protein	NA	NA	NA	NA
WP_020826540.1\|2150579_2152925_-	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA
WP_020826541.1\|2152923_2153091_+	hypothetical protein	NA	NA	NA	NA
WP_020826542.1\|2153076_2153841_-	molecular chaperone	NA	NA	NA	NA
WP_020826543.1\|2153863_2154412_-\|coat	spore coat protein U domain-containing protein	NA	NA	NA	NA
WP_020826544.1\|2154417_2154921_-\|coat	spore coat protein U domain-containing protein	NA	NA	NA	NA
WP_020826545.1\|2154923_2155463_-\|coat	spore coat protein U domain-containing protein	NA	NA	NA	NA
WP_020826546.1\|2155742_2157179_-	16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF	NA	NA	NA	NA
WP_020826547.1\|2157282_2159913_-	PqiB family protein	NA	NA	NA	NA
WP_041415333.1\|2159881_2161129_-	membrane integrity lipid transport subunit YebS	NA	NA	NA	NA
WP_020826549.1\|2161373_2161871_+	GAF domain-containing protein	NA	NA	NA	NA
WP_020826550.1\|2161966_2162677_+	RNA chaperone ProQ	NA	NA	NA	NA
WP_020826551.1\|2162696_2164733_+	carboxy terminal-processing peptidase	A0A0R6PIZ1	Moraxella_phage	1.1e-85	34.5
WP_041414497.1\|2164832_2165216_+	DUF4260 domain-containing protein	NA	NA	NA	NA
WP_020826553.1\|2165623_2166502_+\|protease	protease HtpX	NA	NA	NA	NA

DBSCAN-SWA_3

2202572 : 2229264

Salmonella_phage(29.17%)

terminase,holin,tail,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_020826592.1\|2202572_2203217_-	helix-turn-helix transcriptional regulator	Q8HAA0	Salmonella_phage	3.3e-39	48.7
WP_071846563.1\|2203308_2203536_+	helix-turn-helix domain-containing protein	A0A1W6JTD1	Pseudomonas_phage	3.2e-05	49.0
WP_020826593.1\|2203551_2203875_+	hypothetical protein	H6WRX6	Salmonella_phage	9.7e-40	81.7
WP_020826595.1\|2204164_2204905_+	KilA-N domain-containing protein	Q8HA92	Salmonella_phage	8.2e-34	47.6
WP_020826596.1\|2204894_2205077_+	DUF4222 domain-containing protein	A0A1W6JP38	Morganella_phage	7.2e-08	47.1
WP_020826597.1\|2205073_2206096_+	helix-turn-helix domain-containing protein	H9C164	Pectobacterium_phage	1.0e-42	75.9
WP_020826598.1\|2206092_2207076_+	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	2.8e-61	38.6
WP_020826599.1\|2207072_2207429_+	RusA family crossover junction endodeoxyribonuclease	G8C7V6	Escherichia_phage	2.7e-43	69.5
WP_020826600.1\|2207425_2208121_+	hypothetical protein	Q5G8R6	Enterobacteria_phage	4.9e-12	26.6
WP_020826601.1\|2208284_2208887_-	hypothetical protein	NA	NA	NA	NA
WP_020826602.1\|2208999_2209350_+\|holin	phage holin, lambda family	Q8SBE1	Shigella_phage	1.4e-28	55.0
WP_020826603.1\|2209333_2209774_+	lysozyme	A0A0M4R365	Salmonella_phage	1.7e-47	67.1
WP_041414509.1\|2209770_2210154_+	DUF2570 family protein	NA	NA	NA	NA
WP_144079310.1\|2210541_2210775_+	hypothetical protein	NA	NA	NA	NA
WP_020826606.1\|2211073_2211310_+	hypothetical protein	NA	NA	NA	NA
WP_020826607.1\|2211580_2211880_-	hypothetical protein	NA	NA	NA	NA
WP_020826608.1\|2211911_2212133_+\|terminase	terminase small subunit	I6PDJ6	Cronobacter_phage	3.3e-23	81.9
WP_020826610.1\|2212378_2212765_+	hypothetical protein	A0A0M4QWT0	Salmonella_phage	1.7e-30	53.6
WP_020826611.1\|2212826_2215475_+	tape measure protein	A0A291AXC6	Shigella_phage	3.0e-110	37.2
WP_020826612.1\|2215515_2215983_+	hypothetical protein	A0A173GC35	Salmonella_phage	8.5e-53	63.2
WP_020826613.1\|2215983_2216454_+	DUF1833 family protein	R9TPR6	Aeromonas_phage	4.7e-51	62.1
WP_051150525.1\|2216473_2216878_+	C40 family peptidase	F1C5F2	Cronobacter_phage	3.3e-45	64.7
WP_041414513.1\|2216825_2219321_+\|tail	phage tail protein	A0A1B1W274	Salmonella_phage	2.1e-254	55.1
WP_020826616.1\|2219321_2219774_+	hypothetical protein	A0A2P1MXB7	Escherichia_phage	2.2e-13	63.9
WP_020826617.1\|2219758_2221255_+	hypothetical protein	B5TAB2	Burkholderia_phage	2.8e-97	43.5
WP_144079311.1\|2221664_2222042_+	hypothetical protein	NA	NA	NA	NA
WP_041414516.1\|2222345_2224274_+\|tRNA	threonine--tRNA ligase	A0A2K9L297	Tupanvirus	4.5e-132	37.7
WP_013812633.1\|2224277_2224829_+	translation initiation factor IF-3	A0A2L0UZ54	Agrobacterium_phage	4.4e-16	33.7
WP_004931418.1\|2224927_2225125_+	50S ribosomal protein L35	NA	NA	NA	NA
WP_020826620.1\|2225168_2225525_+	50S ribosomal protein L20	NA	NA	NA	NA
WP_144079312.1\|2225581_2225686_+	pheST operon leader peptide PheM	NA	NA	NA	NA
WP_020826621.1\|2225878_2226862_+\|tRNA	phenylalanine--tRNA ligase subunit alpha	A0A2K9L3A8	Tupanvirus	2.2e-34	38.1
WP_020826622.1\|2226876_2229264_+\|tRNA	phenylalanine--tRNA ligase subunit beta	A0A1L3IZU3	BeAn_58058_virus	2.4e-05	24.0

DBSCAN-SWA_4

2998974 : 3046148

Edwardsiella_phage(27.78%)

plate,head,protease,terminase,holin,integrase

attL 2997926:2997941|attR 3045035:3045050

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2997926:2997941	attL	NA	NA	NA	NA
WP_144079316.1\|2998974_3001179_-	hypothetical protein	B5TAB2	Burkholderia_phage	1.5e-86	40.9
WP_041414663.1\|3001237_3002527_-	hypothetical protein	A0A077KC23	Edwardsiella_phage	8.8e-15	34.1
WP_041415446.1\|3002528_3003116_-	DUF2612 domain-containing protein	A0A2R3UAM9	Myoviridae_environmental_samples	7.7e-35	39.2
WP_020827323.1\|3003115_3004354_-\|plate	baseplate J/gp47 family protein	A0A077KGW9	Edwardsiella_phage	6.3e-111	52.7
WP_020827324.1\|3004361_3004721_-	hypothetical protein	A0A077KCA1	Edwardsiella_phage	2.9e-24	46.5
WP_020827325.1\|3004860_3005319_+	hypothetical protein	NA	NA	NA	NA
WP_020827326.1\|3005341_3005803_-	hypothetical protein	NA	NA	NA	NA
WP_020827327.1\|3005805_3006393_-	hypothetical protein	A0A077KAY0	Edwardsiella_phage	1.9e-33	42.3
WP_020827328.1\|3006392_3007250_-	hypothetical protein	A0A077KC17	Edwardsiella_phage	4.0e-48	39.2
WP_020827329.1\|3007246_3007558_-	hypothetical protein	A0A077K9U4	Edwardsiella_phage	1.4e-19	41.4
WP_020827330.1\|3007557_3008367_-	hypothetical protein	A0A077KGW3	Edwardsiella_phage	1.2e-30	43.1
WP_020827331.1\|3008369_3010196_-	hypothetical protein	A0A0F6R8M6	Escherichia_coli_O157_typing_phage	4.3e-23	37.4
WP_020827333.1\|3010410_3010818_-	hypothetical protein	H9C0W7	Aeromonas_phage	7.3e-16	44.6
WP_041415448.1\|3010826_3011168_-	hypothetical protein	A0A077K9T0	Edwardsiella_phage	1.8e-12	36.4
WP_020827335.1\|3011279_3012758_-	DUF3383 domain-containing protein	H9C0W5	Aeromonas_phage	1.7e-70	35.2
WP_051150527.1\|3012758_3013190_-	hypothetical protein	A0A077KC88	Edwardsiella_phage	2.7e-13	32.8
WP_020827337.1\|3013300_3013669_-	hypothetical protein	A0A077KAW7	Edwardsiella_phage	1.0e-29	53.3
WP_020827338.1\|3013668_3014115_-	hypothetical protein	A0A077KC03	Edwardsiella_phage	9.3e-41	63.0
WP_020827339.1\|3014115_3014511_-	DUF4054 domain-containing protein	A0A068CGG9	Acinetobacter_phage	3.0e-14	43.0
WP_051150528.1\|3014514_3014736_-	hypothetical protein	NA	NA	NA	NA
WP_020827341.1\|3014844_3015873_-	hypothetical protein	A0A077KC85	Edwardsiella_phage	2.5e-60	37.1
WP_020827342.1\|3015872_3016361_-	hypothetical protein	A0A077KAW3	Edwardsiella_phage	3.5e-33	45.9
WP_020827343.1\|3016362_3017484_-	DUF2213 domain-containing protein	A0A219YBB9	Aeromonas_phage	4.9e-62	38.4
WP_041415451.1\|3017533_3018229_-\|head	phage head morphogenesis protein	A0A077KGU5	Edwardsiella_phage	4.2e-48	47.4
WP_020827345.1\|3018281_3019706_-	DUF1073 domain-containing protein	A0A077KC81	Edwardsiella_phage	1.4e-74	35.7
WP_020827346.1\|3019702_3021229_-\|terminase	phage terminase large subunit	Q7Y5U7	Haemophilus_phage	1.3e-134	50.4
WP_020827347.1\|3021182_3021716_-\|terminase	terminase small subunit	G0ZND3	Cronobacter_phage	1.1e-24	41.0
WP_071846586.1\|3021777_3022053_-	hypothetical protein	I3NL98	Bifidobacterium_phage	5.8e-09	51.7
WP_169534193.1\|3022711_3023110_-	hypothetical protein	NA	NA	NA	NA
WP_020827350.1\|3023118_3023559_-	lysozyme	A0A0M4R365	Salmonella_phage	6.4e-50	69.8
WP_020827351.1\|3023572_3023893_-	hypothetical protein	NA	NA	NA	NA
WP_020827352.1\|3023885_3024221_-\|holin	phage holin, lambda family	A0A0M3ULK9	Salmonella_phage	6.0e-24	45.9
WP_020827354.1\|3024742_3025357_-	hypothetical protein	F1C5D0	Cronobacter_phage	1.1e-55	56.5
WP_020827356.1\|3025550_3026084_-	HNH endonuclease	R9TNJ4	Aeromonas_phage	2.7e-26	40.1
WP_041415459.1\|3026080_3026704_-	recombination protein NinG	H6WRY9	Salmonella_phage	1.8e-42	45.3
WP_020827358.1\|3026696_3026816_-	hypothetical protein	NA	NA	NA	NA
WP_041415461.1\|3026967_3027306_-	DUF2591 family protein	R9VYJ6	Serratia_phage	1.1e-12	41.1
WP_020827362.1\|3027433_3027610_-	NinE family protein	NA	NA	NA	NA
WP_020827363.1\|3027609_3028077_-	recombination protein NinB	I6R9D0	Salmonella_phage	8.3e-40	52.1
WP_020827364.1\|3028079_3028421_-	hypothetical protein	I6R980	Salmonella_phage	3.9e-31	59.6
WP_020827365.1\|3028408_3028729_-	hypothetical protein	NA	NA	NA	NA
WP_020827366.1\|3028721_3029027_-	hypothetical protein	E5AGF1	Erwinia_phage	2.1e-20	55.6
WP_081667704.1\|3029019_3029187_-	hypothetical protein	NA	NA	NA	NA
WP_020827367.1\|3029186_3030590_-	AAA family ATPase	F1C5C4	Cronobacter_phage	4.2e-164	63.4
WP_020827368.1\|3030579_3031479_-	hypothetical protein	F1C5C3	Cronobacter_phage	3.5e-103	62.2
WP_020827369.1\|3031465_3031630_-	hypothetical protein	Q76H53	Enterobacteria_phage	4.8e-11	63.0
WP_020827370.1\|3031664_3032150_-	HNH endonuclease	A0A0P0ICV0	Acinetobacter_phage	3.5e-33	49.3
WP_020827371.1\|3032149_3032431_-	transcriptional regulator	G8EYH8	Enterobacteria_phage	1.2e-20	54.8
WP_041415468.1\|3032545_3032773_-	helix-turn-helix domain-containing protein	A0A2H4FNF3	Salmonella_phage	5.8e-23	73.3
WP_020827373.1\|3032890_3033625_+	helix-turn-helix transcriptional regulator	A0A2H4FNG6	Salmonella_phage	1.7e-92	69.5
WP_020827375.1\|3034080_3034356_+	hypothetical protein	NA	NA	NA	NA
WP_020827376.1\|3034360_3034855_-	hypothetical protein	K7PK22	Enterobacteria_phage	1.9e-55	63.4
WP_020827377.1\|3035084_3035654_+	pentapeptide repeat-containing protein	A0A220NQW1	Salmonella_phage	1.0e-31	59.3
WP_020827379.1\|3035778_3036006_+	hypothetical protein	B5WZV1	Pseudomonas_phage	5.8e-07	48.6
WP_020827380.1\|3036122_3036377_+	hypothetical protein	NA	NA	NA	NA
WP_020827381.1\|3036454_3036589_+\|protease	protease FtsH-inhibitory lysogeny factor CIII	NA	NA	NA	NA
WP_020827383.1\|3036692_3036863_+	hypothetical protein	A0A2H4JCE0	uncultured_Caudovirales_phage	2.5e-10	55.4
WP_020827384.1\|3036871_3037477_+	ERF family protein	I6RSN3	Salmonella_phage	1.3e-74	75.1
WP_020827385.1\|3037476_3037875_+	hypothetical protein	I6S1T0	Salmonella_phage	6.0e-47	77.1
WP_020827387.1\|3038297_3039143_+	hypothetical protein	NA	NA	NA	NA
WP_020827388.1\|3039146_3039602_+	hypothetical protein	NA	NA	NA	NA
WP_020827389.1\|3039598_3040129_+	hypothetical protein	J9Q748	Salmonella_phage	8.2e-60	65.1
WP_020827390.1\|3040125_3040503_+	DUF5448 family protein	T1SA95	Salmonella_phage	7.1e-42	69.6
WP_020827391.1\|3040489_3040708_+	hypothetical protein	NA	NA	NA	NA
WP_020827392.1\|3040704_3040938_+	hypothetical protein	R9VX58	Serratia_phage	1.8e-19	62.2
WP_020827393.1\|3040927_3041551_+	hypothetical protein	NA	NA	NA	NA
WP_020827394.1\|3041608_3041869_+	hypothetical protein	A0A1V0E5L9	Salmonella_phage	2.2e-18	60.8
WP_020827395.1\|3041878_3042133_+	DNA polymerase III subunit theta	H9C187	Pectobacterium_phage	1.1e-25	71.4
WP_020827396.1\|3042156_3042435_+	hypothetical protein	NA	NA	NA	NA
WP_020827397.1\|3042503_3042665_+	hypothetical protein	NA	NA	NA	NA
WP_020827398.1\|3042685_3042865_+	hypothetical protein	NA	NA	NA	NA
WP_041414676.1\|3043389_3043644_+	excisionase Xis	NA	NA	NA	NA
WP_020827401.1\|3043615_3044839_-\|integrase	site-specific integrase	H6WRW7	Salmonella_phage	3.6e-127	52.7
WP_164171190.1\|3045068_3046148_-	porin	Q1MVN1	Enterobacteria_phage	9.0e-106	54.6
3045035:3045050	attR	NA	NA	NA	NA

DBSCAN-SWA_5

3711790 : 3721725

Planktothrix_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_020827991.1\|3711790_3713518_+	phosphoenolpyruvate-protein phosphotransferase PtsI	A0A1V0SGR7	Hokovirus	1.1e-17	32.9
WP_012146162.1\|3713567_3714077_+	PTS glucose transporter subunit IIA	NA	NA	NA	NA
WP_041415561.1\|3714341_3715658_-	HAMP domain-containing protein	W8CYF6	Bacillus_phage	3.2e-20	25.6
WP_020827993.1\|3715663_3716344_-	response regulator transcription factor	NA	NA	NA	NA
WP_041414805.1\|3716518_3717712_+	efflux RND transporter periplasmic adaptor subunit	A0A140XAI1	Dickeya_phage	1.3e-28	69.7
WP_041415563.1\|3717714_3719667_+	MacB family efflux pump subunit	G9BWD6	Planktothrix_phage	4.5e-39	41.6
WP_020827996.1\|3719670_3720552_-	cysteine synthase CysM	A0A1X9I5F1	Streptococcus_phage	1.1e-53	40.3
WP_020827997.1\|3720636_3721725_-	sulfate/thiosulfate ABC transporter ATP-binding protein CysA	G9BWD6	Planktothrix_phage	9.3e-34	40.7

DBSCAN-SWA_6

3794065 : 3801412

Salmonella_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_020828066.1\|3794065_3794419_+	arsenate reductase (glutaredoxin)	A0A2H4J8T1	uncultured_Caudovirales_phage	3.9e-18	44.4
WP_020828067.1\|3794618_3794849_+	hypothetical protein	J9Q735	Salmonella_phage	1.3e-14	50.7
WP_020828068.1\|3794861_3795401_+	DNA-binding protein	J9Q7G7	Salmonella_phage	2.5e-48	56.2
WP_041414814.1\|3795417_3796119_-	DnaA inactivator Hda	NA	NA	NA	NA
WP_153263174.1\|3796088_3796238_+	hypothetical protein	NA	NA	NA	NA
WP_020828070.1\|3796347_3796863_+	hypothetical protein	NA	NA	NA	NA
WP_002487967.1\|3796891_3797140_+	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA
WP_020828071.1\|3797355_3798645_-	uracil permease	Q9KX94	Enterobacteria_phage	7.1e-65	38.3
WP_020828072.1\|3798854_3799481_-	uracil phosphoribosyltransferase	NA	NA	NA	NA
WP_020828073.1\|3799736_3800777_+	phosphoribosylformylglycinamidine cyclo-ligase	A0A1D7SE90	Cyanophage	2.6e-70	41.9
WP_020828074.1\|3800773_3801412_+	phosphoribosylglycinamide formyltransferase	E3SNR5	Prochlorococcus_phage	2.9e-27	39.2

DBSCAN-SWA_7

3903280 : 4001514

Enterobacteria_phage(20.0%)

head,capsid,protease,portal,tRNA,terminase,holin,integrase,tail

attL 3958680:3958702|attR 4001754:4001776

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_020828155.1\|3903280_3904477_-\|tRNA	bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN	NA	NA	NA	NA
WP_004952077.1\|3904714_3905140_-	nucleoside-diphosphate kinase	A0A0M5KH58	Mollivirus	1.6e-13	38.8
WP_020828156.1\|3905510_3906548_+	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_020828157.1\|3906670_3908110_+	Na+/H+ antiporter NhaC	NA	NA	NA	NA
WP_020828158.1\|3908111_3909296_+	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA
WP_020828159.1\|3909353_3910184_-	enhanced serine sensitivity protein SseB	NA	NA	NA	NA
WP_020828160.1\|3910275_3911571_-	aminopeptidase PepB	Q6GYZ8	Mycoplasma_phage	1.0e-34	32.1
WP_020828161.1\|3911654_3911855_-	Fe-S cluster assembly protein IscX	NA	NA	NA	NA
WP_004952086.1\|3911887_3912223_-	ISC system 2Fe-2S type ferredoxin	NA	NA	NA	NA
WP_041415599.1\|3912225_3914076_-	Fe-S protein assembly chaperone HscA	A0A0N9QXN8	Chrysochromulina_ericina_virus	3.3e-100	41.5
WP_020828163.1\|3914226_3914748_-	co-chaperone HscB	NA	NA	NA	NA
WP_004952089.1\|3914810_3915134_-	iron-sulfur cluster assembly protein IscA	A0A2H4N7N5	Lake_Baikal_phage	1.0e-20	45.4
WP_020828164.1\|3915259_3915646_-	Fe-S cluster assembly scaffold IscU	A0A218MKD1	uncultured_virus	1.4e-53	78.1
WP_020828165.1\|3915670_3916885_-	IscS subfamily cysteine desulfurase	A0A1X7C038	Faustovirus	4.7e-34	32.2
WP_020828166.1\|3916940_3917435_-	Fe-S cluster assembly transcriptional regulator IscR	NA	NA	NA	NA
WP_020828167.1\|3917630_3918365_-\|tRNA	tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ	NA	NA	NA	NA
WP_020828168.1\|3918484_3919288_+	inositol-1-monophosphatase	NA	NA	NA	NA
WP_020828169.1\|3919463_3920486_-	nickel/cobalt transporter	NA	NA	NA	NA
WP_020828170.1\|3920476_3921145_-	DUF1007 family protein	NA	NA	NA	NA
WP_020828171.1\|3921289_3922555_+	stationary phase inducible protein CsiE	NA	NA	NA	NA
WP_020828172.1\|3922551_3923703_-	3-phenylpropionate MFS transporter	NA	NA	NA	NA
WP_020828173.1\|3923858_3925112_-	serine hydroxymethyltransferase	A0A240F3L3	Aeromonas_phage	6.0e-101	53.2
WP_020828174.1\|3925485_3926676_+	NO-inducible flavohemoprotein	NA	NA	NA	NA
WP_041414839.1\|3926839_3928027_-	cytochrome c	NA	NA	NA	NA
WP_020828176.1\|3928023_3929934_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_020828177.1\|3930020_3931445_-	aminobutyraldehyde dehydrogenase	NA	NA	NA	NA
WP_020828178.1\|3931617_3932424_-	ABC transporter permease	NA	NA	NA	NA
WP_020828179.1\|3932413_3933358_-	ABC transporter permease	NA	NA	NA	NA
WP_020828180.1\|3933359_3934388_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	3.7e-24	31.5
WP_020828181.1\|3934442_3935597_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_020828182.1\|3935845_3937309_-	gamma-aminobutyraldehyde dehydrogenase	NA	NA	NA	NA
WP_020828183.1\|3937425_3938349_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_004847623.1\|3939018_3939357_-	nitrogen regulatory protein P-II	NA	NA	NA	NA
WP_020828185.1\|3939367_3940990_-	NAD+ synthase	A0A2L0UZF5	Agrobacterium_phage	5.4e-94	35.9
WP_020828186.1\|3941118_3942456_-	two-component system response regulator GlrR	W8CYM9	Bacillus_phage	6.5e-13	28.8
WP_020828187.1\|3942452_3943322_-	two-component system QseEF-associated lipoprotein QseG	NA	NA	NA	NA
WP_020828188.1\|3943324_3944761_-	HAMP domain-containing histidine kinase	W8CYF6	Bacillus_phage	2.6e-15	24.7
WP_020828189.1\|3945570_3949461_-	phosphoribosylformylglycinamidine synthase	A9YX36	Burkholderia_phage	5.2e-127	58.4
WP_041415604.1\|3949740_3951201_+	membrane-bound lytic murein transglycosylase MltF	G0YQ82	Erwinia_phage	1.3e-09	38.1
WP_020828191.1\|3951201_3951714_-\|tRNA	tRNA adenosine(34) deaminase TadA	S4VYT2	Pandoravirus	2.3e-06	41.7
WP_020828192.1\|3951898_3952951_+	DUF2157 domain-containing protein	NA	NA	NA	NA
WP_020828193.1\|3953150_3954302_+	L-threonine dehydrogenase	NA	NA	NA	NA
WP_020828194.1\|3954342_3954999_-	phosphatidylglycerophosphatase C	NA	NA	NA	NA
WP_020828195.1\|3955002_3956370_-	PTS transporter subunit EIIC	NA	NA	NA	NA
WP_020828196.1\|3956388_3957282_-	N-acetylmuramic acid 6-phosphate etherase	NA	NA	NA	NA
WP_041414843.1\|3957450_3958299_+	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
3958680:3958702	attL	NA	NA	NA	NA
WP_020828198.1\|3958901_3959144_+	DinI family protein	K7PKR6	Enterobacteria_phage	6.8e-30	83.5
WP_020828200.1\|3959408_3960887_-\|tail	prophage tail fiber N-terminal domain-containing protein	A0A1I9SF20	Klebsiella_phage	2.9e-30	39.4
WP_041414844.1\|3962334_3963324_-	hypothetical protein	NA	NA	NA	NA
WP_041414846.1\|3963325_3966541_-	host specificity protein J	F1C571	Cronobacter_phage	0.0e+00	61.8
WP_020828202.1\|3966714_3967002_+	hypothetical protein	I6S632	Salmonella_phage	5.1e-24	61.1
WP_041415610.1\|3967096_3967699_-\|tail	tail assembly protein	F1C572	Cronobacter_phage	7.6e-62	66.0
WP_169534195.1\|3967758_3968220_-	hypothetical protein	NA	NA	NA	NA
WP_020828205.1\|3968299_3969001_-	C40 family peptidase	A0A1W6JP31	Morganella_phage	1.6e-74	55.0
WP_020828206.1\|3969003_3969756_-\|tail	phage minor tail protein L	A0A1W6JNX9	Morganella_phage	2.8e-90	60.2
WP_020828207.1\|3969764_3970100_-\|tail	phage tail protein	Q6UAW6	Klebsiella_phage	8.3e-18	39.3
WP_020828208.1\|3970096_3973414_-\|tail	phage tail tape measure protein	Q6UAW7	Klebsiella_phage	0.0e+00	58.3
WP_020828209.1\|3973406_3973628_-	hypothetical protein	Q6UAW9	Klebsiella_phage	2.6e-12	55.6
WP_020828210.1\|3973645_3974011_-\|tail	phage tail protein	Q6UAW8	Klebsiella_phage	1.8e-21	44.4
WP_020828211.1\|3974020_3974284_-	immunoglobulin domain-containing protein	Q7Y402	Yersinia_phage	4.2e-17	54.7
WP_020828212.1\|3974280_3974736_-	hypothetical protein	Q7Y403	Yersinia_phage	9.5e-57	74.1
WP_020828213.1\|3974770_3975163_-	HK97 gp10 family phage protein	Q6UAX1	Klebsiella_phage	2.2e-41	66.9
WP_020828214.1\|3975159_3975549_-	hypothetical protein	Q7Y405	Yersinia_phage	1.1e-32	51.6
WP_020828215.1\|3975535_3975874_-\|head	phage head closure protein	Q7Y406	Yersinia_phage	1.5e-19	50.9
WP_020828216.1\|3975870_3976197_-\|head,tail	phage gp6-like head-tail connector protein	K7PKT4	Enterobacteria_phage	1.5e-32	56.5
WP_020828217.1\|3976205_3976463_-	hypothetical protein	NA	NA	NA	NA
WP_020828218.1\|3976511_3977732_-\|capsid	phage major capsid protein	K7PM57	Enterobacteria_phage	1.8e-179	79.8
WP_020828219.1\|3977744_3978599_-\|protease	ATP-dependent Clp protease proteolytic subunit	K7PH05	Enterobacteria_phage	1.3e-123	78.2
WP_020828220.1\|3978612_3979917_-\|portal	phage portal protein	K7PJU5	Enterobacteria_phage	1.7e-204	80.2
WP_071846570.1\|3979916_3981662_-\|terminase	terminase large subunit	M4QNU0	Tetraselmis_viridis_virus	3.4e-139	44.2
WP_020828222.1\|3981612_3982080_-\|terminase	phage terminase small subunit P27 family	Q9B019	Phage_GMSE-1	5.7e-49	62.7
WP_020828223.1\|3982204_3982534_-	HNH endonuclease	K7PM05	Enterobacterial_phage	2.3e-36	65.8
WP_020828224.1\|3982662_3982881_-	hypothetical protein	NA	NA	NA	NA
WP_020828225.1\|3983197_3983737_-	hypothetical protein	K7P6W1	Enterobacteria_phage	9.6e-32	54.1
WP_020828226.1\|3983733_3984168_-	lysozyme	R9TMH8	Aeromonas_phage	9.4e-38	59.4
WP_041414854.1\|3984154_3984502_-\|holin	phage holin, lambda family	Q8HA87	Salmonella_phage	2.2e-29	66.7
WP_020828227.1\|3984576_3985605_-	site-specific DNA-methyltransferase	Q8W637	Enterobacteria_phage	7.0e-124	62.7
WP_020828228.1\|3985962_3986892_+	hypothetical protein	NA	NA	NA	NA
WP_020828229.1\|3987021_3987354_-	hypothetical protein	NA	NA	NA	NA
WP_041415617.1\|3987446_3987806_-	antitermination protein	A0A0P0ZCW0	Stx2-converting_phage	4.3e-36	60.2
WP_020828231.1\|3987805_3988384_-	recombination protein NinG	A0A1P8DTE0	Proteus_phage	3.2e-41	65.6
WP_020828232.1\|3988367_3989354_-	toprim domain-containing protein	A0A286N2Q0	Klebsiella_phage	8.0e-109	60.7
WP_041415622.1\|3989350_3990874_-	DEAD/DEAH box helicase	A0A286N2P9	Klebsiella_phage	5.4e-197	63.2
WP_020828236.1\|3991369_3991879_-	hypothetical protein	S5FXP0	Shigella_phage	4.6e-44	53.5
WP_020828237.1\|3991945_3992179_-	hypothetical protein	O48419	Enterobacteria_phage	6.8e-19	63.6
WP_020828238.1\|3992297_3993050_+	helix-turn-helix transcriptional regulator	Q76H56	Enterobacteria_phage	1.7e-31	34.4
WP_041415624.1\|3993646_3993853_+	hypothetical protein	NA	NA	NA	NA
WP_071846572.1\|3993812_3994259_-	hypothetical protein	NA	NA	NA	NA
WP_020828241.1\|3994377_3994689_-	hypothetical protein	NA	NA	NA	NA
WP_020828242.1\|3994874_3995237_+	hypothetical protein	NA	NA	NA	NA
WP_020828243.1\|3995272_3996085_+	DUF2303 family protein	NA	NA	NA	NA
WP_020828244.1\|3996177_3996993_+	hypothetical protein	A0A2H4J902	uncultured_Caudovirales_phage	1.9e-87	61.3
WP_020828246.1\|3997325_3998093_-	hypothetical protein	NA	NA	NA	NA
WP_020828247.1\|3998091_3998661_+	3'-5' exoribonuclease	K7PLW7	Enterobacteria_phage	1.0e-63	63.2
WP_071846573.1\|3998677_3998893_+	DNA-binding protein	NA	NA	NA	NA
WP_020828248.1\|3999021_3999954_-	hypothetical protein	NA	NA	NA	NA
WP_020828249.1\|4000116_4001514_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
4001754:4001776	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage