CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
NC_021813	Salmonella enterica subsp. enterica serovar Heidelberg str. CFSAN002069 plasmid pCFSAN002069_01, complete sequence	0 crisprs	DEDDh	0	1
NC_021842	Salmonella enterica subsp. enterica serovar Heidelberg str. CFSAN002069 plasmid pCFSAN002069_02, complete sequence	1 crisprs	NA	1	0
NC_021812	Salmonella enterica subsp. enterica serovar Heidelberg str. CFSAN002069, complete sequence	3 crisprs	DEDDh,WYL,DinG,cas3,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK	39	8

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

47080 : 88329

Stx2-converting_phage(16.67%)

transposase,integrase

attL 77139:77168|attR 97020:97049

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000078704.1\|47080_48019_-\|transposase	Rpn family recombination-promoting nuclease/putative transposase	Q2A0A7	Sodalis_phage	3.6e-66	53.4
WP_001247862.1\|48083_48350_-	hypothetical protein	NA	NA	NA	NA
WP_000218863.1\|48443_48878_-	hypothetical protein	NA	NA	NA	NA
WP_000117611.1\|49606_50107_-	antirestriction protein ArdA	G9FHQ1	Rhodococcus_virus	2.4e-05	27.3
WP_000977997.1\|50568_51165_-	hypothetical protein	A0A0N7KZV3	Escherichia_phage	3.4e-14	55.3
WP_001276270.1\|51161_51881_-	plasmid SOS inhibition protein A	NA	NA	NA	NA
WP_001387500.1\|51877_52312_-	conjugation system SOS inhibitor PsiB	NA	NA	NA	NA
WP_001145485.1\|52366_54325_-	ParB/RepB/Spo0J family partition protein	G8DH78	Emiliania_huxleyi_virus	7.3e-21	29.4
WP_000006020.1\|54383_54617_-	DUF905 domain-containing protein	A0A096XUX0	Cronobacter_phage	1.7e-06	53.2
WP_001276120.1\|54674_55202_-	single-stranded DNA-binding protein	I3PGW4	Xanthomonas_phage	1.6e-47	73.5
WP_001434357.1\|55585_55900_-	hypothetical protein	NA	NA	NA	NA
WP_001027495.1\|55970_56162_-	hypothetical protein	NA	NA	NA	NA
WP_000271705.1\|56158_56581_-	DUF1380 family protein	NA	NA	NA	NA
WP_001198939.1\|56627_57053_-	antirestriction protein	NA	NA	NA	NA
WP_001668483.1\|57025_57598_-	YubH family protein	NA	NA	NA	NA
WP_000274500.1\|58292_58727_-	DUF1380 domain-containing protein	NA	NA	NA	NA
WP_001104881.1\|58740_58962_-	hypothetical protein	NA	NA	NA	NA
WP_000086147.1\|58962_59646_-	DNA methylase	A0A2I7RE86	Vibrio_phage	1.1e-29	36.4
WP_001348079.1\|60030_60933_-	DUF1281 domain-containing protein	NA	NA	NA	NA
WP_000272884.1\|61613_62006_-	hypothetical protein	NA	NA	NA	NA
WP_001217836.1\|62009_62984_-	hypothetical protein	A0A222YXF2	Escherichia_phage	3.1e-73	45.1
WP_001394937.1\|63222_63426_-	hypothetical protein	NA	NA	NA	NA
WP_000312331.1\|63596_64229_-	ParA family protein	A0A0K1LMB9	Rhodobacter_phage	1.4e-29	39.1
WP_001164192.1\|64812_65598_-\|integrase	phage integrase family protein	I3WFA4	Macacine_betaherpesvirus	4.0e-55	96.5
WP_000465034.1\|65599_66013_-	hypothetical protein	NA	NA	NA	NA
WP_000343102.1\|66581_66842_+	hypothetical protein	NA	NA	NA	NA
WP_000194555.1\|66838_67429_+	hypothetical protein	NA	NA	NA	NA
WP_000142424.1\|67446_67794_-	hypothetical protein	NA	NA	NA	NA
WP_000762580.1\|67912_68260_+	hypothetical protein	NA	NA	NA	NA
WP_001283356.1\|68277_70158_-	colicin	NA	NA	NA	NA
WP_001132019.1\|70436_71783_-	hypothetical protein	NA	NA	NA	NA
WP_000517689.1\|72136_72739_+	hypothetical protein	NA	NA	NA	NA
WP_041031003.1\|72794_73271_+	hypothetical protein	NA	NA	NA	NA
WP_001339397.1\|73307_73985_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZCV4	Stx2-converting_phage	3.3e-21	46.0
WP_000624622.1\|73984_74332_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	2.6e-46	76.6
WP_000381395.1\|74351_75923_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	9.9e-170	58.7
WP_000627831.1\|75995_76262_+	hypothetical protein	NA	NA	NA	NA
WP_031610367.1\|76738_77155_-	hypothetical protein	NA	NA	NA	NA
77139:77168	attL	NA	NA	NA	NA
WP_001138064.1\|77163_80130_-\|transposase	Tn3-like element TnAs3 family transposase	A0A1B0V7H9	Salmonella_phage	0.0e+00	73.6
WP_000147566.1\|80132_80693_-	recombinase family protein	A0A1B0V7I5	Salmonella_phage	2.1e-50	87.0
WP_000454193.1\|80818_81169_-	DUF3330 domain-containing protein	NA	NA	NA	NA
WP_000845048.1\|81371_82385_-\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	1.0e-71	45.5
WP_001206316.1\|82533_83325_+	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA1	NA	NA	NA	NA
WP_020837048.1\|83491_84391_+	aminoglycoside N-acetyltransferase AAC(3)-VIa	NA	NA	NA	NA
WP_000535481.1\|84597_84918_+	co-chaperone GroES	A0A221S4G8	uncultured_virus	1.0e-17	47.9
WP_000719078.1\|84973_86611_+	chaperonin GroEL	A0A240F779	uncultured_virus	1.8e-174	60.6
WP_001137772.1\|86799_88329_+\|transposase	IS91 family transposase	NA	NA	NA	NA
97020:97049	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NC_021842

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CRISPR-Cas detection and classification

Crispr_ID: NC_021842_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_021842_1

3974-4093

Orphan

Consensus_repeat	Method
TGAAAGGTGGATGGGTACGCACTGAAAGGTGGATAGGTACGCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_021842_1

>merge|NC_021842|1|3974-4093|CRISPRCasFinder
TGAAAGGTGGATGGGTACGCACTGAAAGGTGGATAGGTACGCACTGTAATTTTCATGAAAGGTGGATGGCTGCGCACTGAAAGGTGGATGGGTACGCACTGAAAGGTGGATGGGTACGCA

>NC_021842|1|1|3974-4093|CRISPRCasFinder
TGAAAGGTGGATGGGTACGCACTGAAAGGTGGATAGGTACGCA	CTGTAATTTTCATGAAAGGTGGATGGCTGCGCAC
TGAAAGGTGGATGGGTACGCACTGAAAGGTGGATGGGTACGCA

Protein	Signature genes	Signature genes Name	Protein_function
NC_021842.2\|WP_000160399.1\|495_768_-\|hypothetical-protein	unknown	unknown	unknown
NC_021842.2\|WP_001050931.1\|4345_5182_+\|replication-initiation-protein	unknown	unknown	gnl\|CDD\|376444
NC_021842.2\|WP_001074386.1\|5221_5668_+\|hypothetical-protein	unknown	unknown	unknown
NC_021842.2\|WP_001426297.1\|5804_6161_+\|hypothetical-protein	unknown	unknown	unknown
NC_021842.2\|WP_000565612.1\|9380_9464_-\|hypothetical-protein	unknown	unknown	unknown
NC_021842.2\|WP_001269910.1\|6157_7135_-\|hypothetical-protein	unknown	unknown	unknown
NC_021842.2\|WP_001185482.1\|7159_7441_-\|hypothetical-protein	unknown	unknown	unknown
NC_021842.2\|WP_000203396.1\|8581_9226_+\|recombinase-family-protein	unknown	unknown	gnl\|CDD\|239736
NC_021842.2\|WP_000438384.1\|11272_11623_+\|hypothetical-protein	unknown	unknown	unknown
NC_021842.2\|WP_000190049.1\|11706_12216_+\|hypothetical-protein	unknown	unknown	unknown
NC_021842.2\|WP_000516402.1\|7538_8201_-\|peptidyl-arginine-deiminase	unknown	unknown	gnl\|CDD\|222854

>NC_021842.2|WP_000160399.1|495_768_-|hypothetical-protein
MTKHDFVSFVSGELRQGAVRFSLAFNSKGEIVLHWTNKAGIRVWRILSGNRGKKPSKANLERMSNFRRWLFDARQGMEGYTQQPEQSNLS
>NC_021842.2|WP_001050931.1|4345_5182_+|replication-initiation-protein
MNLLSVTKKTKIRHRNEINSTFSSLPLSARRILFMAMAQIDSREELSEGATFRITAREYAFIADIDVTGAYRQLKEGAEELQASVIRIPRNQLLTPQGNQSSGHTKKRGKLPSDAVRLMNLTAFCDYVESEGYIDIAFSHVIEPYITMLKDSYTTQVLISSVRLADQNSNMLYQFIRKQYSSGKKTFFDIEVDVLKDELELFRIDNGEKVYLYQNFKDFNKVFLQKNIEKINQYTEINHLEVKIVERVARRASKLRFSYKIDKESEGLDIRIPYGFRG
>NC_021842.2|WP_001074386.1|5221_5668_+|hypothetical-protein
MAKIYQFPQGEERAKFRKEIARERKKRFAVKTGSTFVKWLGWGWFYLRLLVASVLHFIFVFVLAILGAFKWAVFWLGGILCVITWYHLDHQLWTPQNLTIPVITATWILGLLAEPLMELLNKTMPWHKLLVPEPADESTENSSEISQQ
>NC_021842.2|WP_001426297.1|5804_6161_+|hypothetical-protein
MEYQVREFINEKYTKAVNILKDNLKENYHVFYGVRLSEILFPASEYGTDAFFKEFELINSVILPLVIFDLTQRKPMMIISFDKILDASLLEGTNIVVLECITLADLLTNDNIDFLYKS
>NC_021842.2|WP_001269910.1|6157_7135_-|hypothetical-protein
MRYLTELICDLYRLTDHHKLTTATFKNLADIKLFKPTADADTILQLENIFSEYSLRYIDKDLAEILSNLITTDKKHSLDFDFNKIQSLTDSKSFGCGWSKVINGSWFKDLYSWGEGMYPAENLKAENILDWKDNIWHIEHEGFPPRNPINVKYYSWFDRYVASNSGGSHHAAMVVYQSVRDGLEYKREAVIKQLSIDPGTVEILDKNYYSFIFQIKTLNKETRIYTSEYEFTDALKDFGQNRHTILKPVNYVSNIKLVFIPKDALKTNSETFRNWFHSAISCGKIISLPDYLKNPAHYHTLHYSHEVDSITLGDPSRKFKLKGDS
>NC_021842.2|WP_001185482.1|7159_7441_-|hypothetical-protein
MALKLNRPNIDESQQPATNAETARFISGATRAPVVGKPKLMNFRLSAHFEDILEAEAIRTGQSKTTVLKAALAMYNSQDENIKNHWLLESAKF
>NC_021842.2|WP_000516402.1|7538_8201_-|peptidyl-arginine-deiminase
MGKILLVVSDKGGVGKSTYVANTGSMLVNKGKSVIILKTDKNHDLLSWNEKRTDNGLLTIPVHAAYGNVSNEIKRLSKLCEVLIVDCPGHDSQEFRSALTVSDIVVTLVKPSSDFESETLTSVTEKIRTAQKANAALEPWVLFTRINSAKPRHRKAAIDLDKLLRSDNIWIQPLKTRISELDVYESACNEGAGVHDVSRASSLSTAKAQIELVAQEIGIL
>NC_021842.2|WP_000203396.1|8581_9226_+|recombinase-family-protein
MTSNVPTSFVRAYLRASTAEQDASRALETIEAFARERGLIICSYYIENESGTRLERPELFRLLRDCQQNDILLIEDVDRLSRLSGEDWNTLKKMIRQKDIRVMAVNVPTTWINSGMSEFDSRLFAAINDMLLDMLAAVARRDYEQRRERQKQGIEKAKKDGKYKGRKPNQARHDAIIRLIESGSSWTQVQKVLGCSRGTISNALKRKTGQKSSK
>NC_021842.2|WP_000565612.1|9380_9464_-|hypothetical-protein
MIDKAIIVLGALISLLELIRYLLQLMG
>NC_021842.2|WP_000438384.1|11272_11623_+|hypothetical-protein
MEQTLAKVTRIQAGRYAVDDGRCIIKNNSGWLIVDANGAHDFGPVPTLAAAKEYVESGTVPLRQHNFSTSHGRRQSKKEFNAYLASEAKNGNPMPAILWIIVLCIICGIVVAVRGY
>NC_021842.2|WP_000190049.1|11706_12216_+|hypothetical-protein
MATEWVDVADNAVKIGLGALITIVGGWITLKLTHCHEIRKDAIAQRLRDIDKKTDRYIDFLSSSQTLMQKYLYESCDPGSEDYTNYMRLHNIVSLTSSPELRIYAFDTQSKVSQFILLRKPNEPEVIDSCRNAARNAVSVLQGAVSAELLQDKAALQDKQHAWWAFWRK

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_KX518744	Escherichia coli strain HYEC7 plasmid pHYEC7-110, complete sequence	63874-63907	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP041286	Escherichia coli strain 54 plasmid p54-tetX, complete sequence	64169-64202	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_KU321583	Escherichia coli strain E80 plasmid pE80, complete sequence	38215-38248	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_KT990220	Escherichia coli strain 42-2 plasmid p42-2, complete sequence	37006-37039	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP010164	Escherichia coli strain H2 plasmid A, complete sequence	20751-20784	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP019647	Salmonella enterica subsp. enterica serovar Typhimurium strain TW-Stm6 plasmid pSTM6-275, complete sequence	239581-239614	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP022964	Salmonella enterica subsp. enterica serovar Pullorum strain QJ-2D-Sal plasmid pQJDsal1, complete sequence	30266-30299	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP024467	Shigella dysenteriae strain BU53M1 plasmid unnamed1, complete sequence	17630-17663	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_LS999563	Escherichia coli isolate EC-TO143 plasmid 4, complete sequence	16611-16644	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_LS999563	Escherichia coli isolate EC-TO143 plasmid 4, complete sequence	53074-53107	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP019284	Escherichia coli strain 13P484A plasmid p13P484A-4, complete sequence	32601-32634	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP047093	Salmonella sp. S13 plasmid pS13-4, complete sequence	1762-1795	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP051432	Escherichia sp. SCLE84 plasmid pSCLE2, complete sequence	23725-23758	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP046002	Escherichia coli strain 1916D6 plasmid p1916D6-2, complete sequence	35337-35370	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP045188	Escherichia coli strain NT1F31 plasmid pNT1F31-tetX4, complete sequence	26770-26803	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP031548	Escherichia coli strain cq9 plasmid unnamed2, complete sequence	41390-41423	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP031548	Escherichia coli strain cq9 plasmid unnamed2, complete sequence	60962-60995	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP032386	Salmonella enterica subsp. enterica serovar Dublin strain CVM N53043 plasmid pN53043_2, complete sequence	39391-39424	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP032389	Salmonella enterica subsp. enterica serovar Dublin strain CVM N45955 plasmid pN45955_2, complete sequence	9889-9922	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_LT904873	Salmonella enterica subsp. enterica serovar Typhi strain ERL11909 plasmid 2	5696-5729	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_KT754163	Shigella dysenteriae 1 strain A5468 plasmid pA5468, complete sequence	12265-12298	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP033383	Salmonella enterica subsp. enterica strain CFSA300 plasmid pCFSA300-2, complete sequence	7366-7399	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP020836	Escherichia coli strain CFSAN051542 plasmid pCFSAN051542, complete sequence	20407-20440	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP038140	Escherichia coli strain G3X16-2 plasmid pG3X16-2-3, complete sequence	93494-93527	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP043216	Salmonella enterica subsp. enterica serovar Heidelberg strain SL-312 plasmid pET8.2-IncX1, complete sequence	32193-32226	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP042617	Escherichia coli strain NCYU-26-73 plasmid pNCYU-26-73-2, complete sequence	25537-25570	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP031361	Salmonella enterica subsp. enterica serovar Heidelberg strain 5 plasmid p2, complete sequence	27033-27066	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP044153	Shigella flexneri strain AR-0425 plasmid pAR-0425-1, complete sequence	25749-25782	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP040929	Escherichia coli strain YY76-1 plasmid pYY76-1-2, complete sequence	2187-2220	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP033386	Salmonella enterica subsp. enterica strain CFSA1007 plasmid pCFSA1007-2, complete sequence	34721-34754	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP041177	Salmonella enterica subsp. enterica serovar Enteritidis strain SJTUF12367v2 plasmid p12367A, complete sequence	4942-4975	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP034761	Klebsiella pneumoniae strain NB5306 plasmid unnamed2, complete sequence	47580-47613	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP050707	Salmonella enterica subsp. enterica serovar Enteritidis strain SE124 plasmid pSE124-1, complete sequence	14631-14664	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP047339	Klebsiella pneumoniae strain 2019036D plasmid p2019036D-35kb, complete sequence	28949-28982	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NC_010860	Salmonella enterica subsp. enterica serovar Enteritidis plasmid pSE34, complete sequence	32623-32656	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP022453	Salmonella enterica subsp. enterica serovar Indiana strain D90 plasmid pD90-3, complete sequence	5893-5926	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP024153	Escherichia coli strain 14EC033 plasmid p14EC033f, complete sequence	53536-53569	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP030208	Salmonella enterica strain SA19992307 plasmid pSA19992307.1, complete sequence	39815-39848	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP005994	Salmonella enterica subsp. enterica serovar Heidelberg str. CFSAN002064 plasmid unnamed, complete sequence	30028-30061	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP032450	Salmonella enterica subsp. enterica serovar Dublin strain USMARC-69838 plasmid pSDU1-USMARC-69838, complete sequence	29110-29143	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP010155	Escherichia coli strain D9 plasmid C, complete genome	14497-14530	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP050174	Escherichia coli strain STB20-1 plasmid pSTB20-1T, complete sequence	58667-58700	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP029061	Escherichia coli strain FORC_081 plasmid pFORC_081_4, complete sequence	10786-10819	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP042589	Escherichia coli strain PK6 plasmid pRHEcCUB-1, complete sequence	29459-29492	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP025677	Escherichia albertii strain ChinaSP140150 plasmid pEA-1, complete sequence	79278-79311	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP041453	Escherichia coli strain YPE3 plasmid pYPE3-92k-tetX4, complete sequence	54169-54202	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	MN816373	Escherichia coli strain A127 plasmid pA127-X1, complete sequence	29459-29492	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP052879	Escherichia coli strain C21 plasmid pC21-2, complete sequence	61147-61180	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP033379	Escherichia coli strain L73 plasmid pL73-2, complete sequence	99797-99830	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP033632	Escherichia coli isolate ECCNB12-2 plasmid pTB-nb1, complete sequence	88012-88045	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP050724	Salmonella enterica subsp. enterica serovar Enteritidis strain SE74 plasmid pSE74-1, complete sequence	41949-41982	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP047573	Escherichia coli strain 2EC1 plasmid p2EC1-2, complete sequence	53619-53652	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NC_019106	Salmonella enterica subsp. enterica serovar Dublin plasmid pSD_77, complete sequence	32551-32584	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP010127	Escherichia coli strain C8 plasmid B, complete genome	33248-33281	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP027138	Escherichia coli strain AR_0369 plasmid unnamed2	85971-86004	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP022072	Salmonella enterica subsp. enterica serovar Typhimurium strain FDAARGOS_321 plasmid unnamed2, complete sequence	18650-18683	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP043935	Klebsiella pneumoniae strain 555 plasmid pSCKLB555-3, complete sequence	20398-20431	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP043935	Klebsiella pneumoniae strain 555 plasmid pSCKLB555-3, complete sequence	147056-147089	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP045998	Escherichia coli strain 1916D18 plasmid p1916D18-1, complete sequence	35339-35372	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP032394	Salmonella enterica subsp. enterica serovar Dublin strain CVM 22453 plasmid p22453_2, complete sequence	32800-32833	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NC_019256	Shigella sp. LN126 plasmid pLN126_33, complete sequence	2112-2145	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	MH884649	Salmonella sp. strain Sa21 plasmid pSa21-IncX1-28K, complete sequence	16816-16849	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	MH884651	Salmonella sp. strain Sa21 plasmid pSa21-TC-CIP, complete sequence	68260-68293	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	MH229869	Escherichia coli plasmid pKANJ7, complete sequence	90-123	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP050713	Salmonella enterica subsp. enterica serovar Enteritidis strain SE104 plasmid pSE104-1, complete sequence	33434-33467	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP041439	Escherichia coli strain YPE12 plasmid pYPE12-106k, complete sequence	96892-96925	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP041443	Escherichia coli strain YPE12 plasmid pYPE12-101k-tetX4, complete sequence	63333-63366	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_MK461931	Escherichia coli strain F2_14D plasmid pF2_14D_HI2, complete sequence	238663-238696	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_MK656937	Escherichia coli strain T3 plasmid pT3, complete sequence	37880-37913	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_MK731977	Escherichia coli strain ENV103 plasmid pSGMCR103, complete sequence	22155-22188	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_MK673546	Salmonella enterica subsp. enterica serovar Typhimurium strain GDD27-24 plasmid pGDD27-24, complete sequence	28203-28236	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP032447	Salmonella enterica subsp. enterica serovar Dublin strain USMARC-69840 plasmid pSDU1-USMARC-69840, complete sequence	18380-18413	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_MH179305	Salmonella enterica subsp. enterica serovar Indiana strain JT01 plasmid pJT01, complete sequence	118004-118037	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_MH179305	Salmonella enterica subsp. enterica serovar Indiana strain JT01 plasmid pJT01, complete sequence	151970-152003	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_MH287085	Escherichia coli strain F2_12B plasmid pSDC-F2_12BHI2, complete sequence	243053-243086	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_MH287084	Escherichia coli O157 strain SvETEC plasmid pSDE-SvHI2, complete sequence	241163-241196	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP025558	Salmonella enterica subsp. enterica serovar Enteritidis strain PIR00532 plasmid p2PIR00532, complete sequence	11939-11972	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	MT219825	Escherichia coli strain RW7-1 plasmid pRW7-1_235k_tetX, complete sequence	90443-90476	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	MT219826	Escherichia coli strain RW8-1 plasmid pRW8-1_122k_tetX, complete sequence	43726-43759	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_MG904998	Escherichia coli strain 15OD0495 plasmid p15ODTXV, complete sequence	48918-48951	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_MG197491	Escherichia coli strain FKU92 plasmid pHNFKU92, complete sequence	33352-33385	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_MG197498	Escherichia coli strain HZMCC14 plasmid pHNMCC14, complete sequence	58347-58380	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_MG197503	Escherichia coli strain ZYTM118 plasmid pHNZY118, complete sequence	61256-61289	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_MG197495	Escherichia coli strain AHC24 plasmid pHNAH24, complete sequence	61256-61289	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_MF589339	Escherichia coli strain 2271 plasmid pCTXM-2271, complete sequence	27964-27997	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_MG197502	Escherichia coli strain ZYTF32 plasmid pHNZY32, complete sequence	61256-61289	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	MT219818	Escherichia coli strain RF148-1 plasmid pRF148-1_119k_tetX, complete sequence	43736-43769	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	MT219820	Escherichia coli strain RF108-2 plasmid pRF108-2_97k_tetX, complete sequence	80789-80822	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	MT219822	Escherichia coli strain RF14-1 plasmid pRF14-1_50k_tetX, complete sequence	38970-39003	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	MT219823	Escherichia coli strain RF10-1 plasmid pRF10-1_119k_tetX, complete sequence	73817-73850	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NC_023323	Escherichia coli ACN001 plasmid pACN001-A, complete sequence	18865-18898	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	MF554637	uncultured bacterium clone AA-100 plasmid pPIMMR, complete sequence	14942-14975	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP016575	Salmonella enterica subsp. enterica serovar Heidelberg strain AMR588-04-00435 plasmid pAMR588-04-00435_37, complete sequence	296-329	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP020060	Escherichia coli strain AR_0061 plasmid unitig_2, complete sequence	30572-30605	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP032994	Escherichia coli strain W5-6 plasmid p2_W5-6, complete sequence	10049-10082	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	MN783746	Escherichia coli plasmid pIncX1_p1, complete sequence	5290-5323	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_KX815983	Salmonella enterica subsp. enterica serovar Dublin strain N13-01125 plasmid pN13-01125, complete sequence	40397-40430	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_KU254580	Escherichia coli strain YD786 plasmid pYD786-3, complete sequence	25507-25540	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP042633	Escherichia coli strain NCYU-25-82 plasmid pNCYU-25-82-6, complete sequence	38916-38949	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP032392	Salmonella enterica subsp. enterica serovar Dublin strain CVM 34981 plasmid p34981_2, complete sequence	67739-67772	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP019272	Escherichia coli strain 13P460A plasmid p13P460A-1, complete sequence	35028-35061	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP053728	Escherichia coli strain CP61_Sichuan plasmid pCP61-IncN, complete sequence	69102-69135	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP037995	Salmonella enterica subsp. enterica serovar Brancaster strain sg_ww281 plasmid psg_ww281	7255-7288	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP053740	Escherichia coli strain CP8-3_Sichuan plasmid pCP8-3-IncX1, complete sequence	9971-10004	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP016580	Salmonella enterica subsp. enterica serovar Heidelberg strain SH13-006 plasmid pSH13-006_37, complete sequence	23703-23736	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP046001	Escherichia coli strain 1916D6 plasmid p1916D6-1, complete sequence	49989-50022	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP021103	Escherichia coli strain 13P477T plasmid p13P477T-7, complete sequence	56470-56503	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP029182	Escherichia coli strain H9Ecoli plasmid p3-H9, complete sequence	2302-2335	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	MN086778	Escherichia coli plasmid p16EC-IncN, complete sequence	90173-90206	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP053047	Escherichia fergusonii strain HNCF11W plasmid pHNCF11W-tetX4, complete sequence	9874-9907	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP014974	Salmonella enterica subsp. enterica serovar Typhimurium str. USDA-ARS-USMARC-1898 isolate ST073 plasmid pSTY3-1898, complete sequence	295-328	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP032397	Salmonella enterica subsp. enterica serovar Dublin strain CVM 22429 plasmid p22429, complete sequence	220331-220364	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP035774	Klebsiella pneumoniae strain R46 plasmid pR46-27, complete sequence	12757-12790	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP044182	Salmonella enterica subsp. enterica serovar Heidelberg strain AR-0404 plasmid pAR-0404-1, complete sequence	25543-25576	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP042608	Escherichia coli strain NCYU-29-19 plasmid pNCYU-29-19-2_MCR3, complete sequence	7171-7204	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	MK461930	Escherichia coli strain 2009_36 plasmid p2009_36_HI2, complete sequence	45261-45294	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NC_019046	Escherichia coli plasmid pNMEC31_31, complete sequence	31361-31394	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP047460	Escherichia coli strain ZF31 plasmid pZF31-tetX-119kb, complete sequence	89191-89224	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP047466	Escherichia coli strain ZF34 plasmid pZF34-tetX-114kb, complete sequence	30748-30781	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP035315	Escherichia coli strain D72 plasmid pD72-IncX1, complete sequence	28493-28526	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP050748	Salmonella enterica subsp. enterica serovar Typhimurium strain ST53 plasmid pST53-3, complete sequence	5878-5911	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NC_024961	Escherichia coli plasmid pIS15_43, strain ISI5, complete sequence	905-938	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NC_021842	Salmonella enterica subsp. enterica serovar Heidelberg str. CFSAN002069 plasmid pCFSAN002069_02, complete sequence	4017-4050	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_LT985261	Escherichia coli strain 657 plasmid RCS50_p, complete sequence	42585-42618	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_AP019678	Escherichia coli strain GSH8M-2 plasmid pGSH8M-2-3, complete sequence	49115-49148	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP009074	Escherichia coli ATCC 25922 plasmid unnamed, complete sequence	21137-21170	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP010168	Escherichia coli strain H3 plasmid A, complete genome	25682-25715	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NC_010378	Escherichia coli plasmid pOLA52, complete sequence	34562-34595	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	CP016512	Salmonella enterica subsp. enterica serovar Heidelberg strain SH14-028 plasmid pSH14-028_37, complete sequence	23704-23737	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP016529	Salmonella enterica subsp. enterica serovar Heidelberg strain 09-036813-1A plasmid p09-036813-1A_42, complete sequence	23704-23737	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP016518	Salmonella enterica subsp. enterica serovar Heidelberg strain CE-R2-11-0435 plasmid pCE-R2-11-0435_37, complete sequence	23705-23738	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP032988	Escherichia coli strain BE2-5 plasmid p2_BE2-5, complete sequence	50710-50743	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP017633	Escherichia coli strain SLK172 plasmid pSLK172-2, complete sequence	23885-23918	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP012922	Salmonella enterica subsp. enterica serovar Heidelberg strain SA02DT10168701 plasmid pSA02DT10168701_37, complete sequence	23704-23737	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP033093	Escherichia coli strain CP53 plasmid pCP53-38k, complete sequence	19532-19565	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP012926	Salmonella enterica subsp. enterica serovar Heidelberg strain 12-4374 plasmid p12-4374_37, complete sequence	37369-37402	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP023360	Escherichia coli strain 1943 plasmid p54, complete sequence	52726-52759	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	CP043734	Escherichia coli strain CVM N17EC1164 plasmid pN17EC1164-1, complete sequence	37807-37840	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP039600	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014867 plasmid p12-6334.1, complete sequence	32872-32905	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP030283	Escherichia coli strain E308 plasmid pLKSZ02, complete sequence	49947-49980	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NC_011204	Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 plasmid pCT02021853_74, complete sequence	70648-70681	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NC_017624	Salmonella enterica subsp. enterica serovar Heidelberg str. B182 plasmid pB182_37, complete sequence	23689-23722	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP050710	Salmonella enterica subsp. enterica serovar Enteritidis strain SE109 plasmid pSE109-1, complete sequence	15569-15602	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP024290	Escherichia coli O178:H19 strain 2012C-4431 plasmid unnamed1, complete sequence	33653-33686	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP048777	Salmonella enterica subsp. enterica serovar Agona strain SG17-135 plasmid pSG17-135-X, complete sequence	1446-1479	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP041631	Escherichia coli strain PE15 plasmid pPE15-27K, complete sequence	4799-4832	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP050773	Salmonella enterica subsp. enterica serovar Indiana strain SI102 plasmid pSI102-2, complete sequence	30707-30740	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP041444	Escherichia coli strain YPE10 plasmid pYPE10-78k, complete sequence	38005-38038	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP019180	Salmonella enterica subsp. enterica serovar Dublin str. ATCC 39184 plasmid pATCC39184, complete sequence	24566-24599	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP050765	Salmonella enterica subsp. enterica serovar Indiana strain SI111 plasmid pSI111-1, complete sequence	6593-6626	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NC_010422	Salmonella enterica subsp. enterica serovar Dublin plasmid pOU1115, complete sequence	59434-59467	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP050759	Salmonella enterica subsp. enterica serovar Indiana strain SI173 plasmid pSI173-2, complete sequence	5734-5767	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_AP022652	Escherichia coli strain 09-02E plasmid p2-09-02E, complete sequence	295-328	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP024136	Escherichia coli strain 14EC017 plasmid p14EC017b, complete sequence	79478-79511	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_LT985315	Escherichia coli strain ECOR 70 plasmid RCS99_p, complete sequence	47119-47152	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	MN436006	Escherichia coli strain JS1-EC05 plasmid pEC05-X4, complete sequence	27492-27525	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	MN436007	Escherichia coli strain JS3-EC12 plasmid pEC12-X4, complete sequence	27131-27164	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_MK360096	Salmonella enterica strain 13-SA02717 plasmid pSE13-SA02717, complete sequence	44664-44697	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP045839	Citrobacter sp. H12-3-2 plasmid pH12-2, complete sequence	48284-48317	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP032381	Salmonella enterica subsp. enterica serovar Dublin strain USMARC-69807 plasmid pSDU2-USMARC-69807, complete sequence	12454-12487	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_MG825381	Escherichia coli strain 1108 plasmid p1108-NDM, complete sequence	43402-43435	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	MT197111	Escherichia coli strain RB3-1 plasmid pRB3-1_31K_tetX, complete sequence	12897-12930	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	MT219817	Escherichia coli strain RF148-2 plasmid pRF148-2_101k_tetX, complete sequence	59284-59317	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	MT219819	Escherichia coli strain RF52-1 plasmid pRF52-1_119k_tetX, complete sequence	118931-118964	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	MT219821	Escherichia coli strain RF45-1 plasmid pRF45-1_31k_tetX, complete sequence	3734-3767	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_MG288677	Klebsiella pneumoniae strain F160070 plasmid p160070-CTXM, complete sequence	29004-29037	0	1.0
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP030195	Salmonella enterica strain SA20080453 plasmid pSA20080453.1, complete sequence	159-192	1	0.971
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP033353	Salmonella enterica subsp. enterica strain CFSA664 plasmid pCFSA664-1, complete sequence	78450-78483	2	0.941
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP050780	Salmonella enterica subsp. enterica serovar Indiana strain SI85 plasmid pSI85-1, complete sequence	203947-203980	2	0.941
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP022061	Salmonella enterica strain FDAARGOS_312 plasmid unnamed2, complete sequence	1711-1744	2	0.941
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	CP048927	Salmonella enterica subsp. enterica serovar Saintpaul strain NY-N14748 plasmid pN14748, complete sequence	45611-45644	2	0.941
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP029841	Salmonella enterica subsp. enterica serovar Typhimurium strain 01ST04081 plasmid p01ST04081A, complete sequence	98434-98467	2	0.941
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP028313	Salmonella enterica subsp. enterica serovar Heidelberg strain CFSAN067218 plasmid pSH-04-2, complete sequence	41569-41602	2	0.941
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP018662	Salmonella enterica subsp. enterica serovar Enteritidis strain 95-0621 plasmid pSE95-0621-1, complete sequence	41992-42025	2	0.941
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	CP049987	Salmonella enterica subsp. enterica serovar Saintpaul strain CVM N16S133 plasmid pN16S133, complete sequence	41386-41419	2	0.941
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	CP049982	Salmonella enterica subsp. enterica serovar Saintpaul strain CVM N52030 plasmid pN52030, complete sequence	42740-42773	2	0.941
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NC_010421	Salmonella enterica subsp. enterica serovar Dublin plasmid pOU1114, complete sequence	27662-27695	2	0.941
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_MK625201	Salmonella enterica subsp. enterica serovar Pullorum strain S9804 plasmid pSPUR, complete sequence	41824-41857	2	0.941
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP023476	Salmonella enterica subsp. enterica serovar Enteritidis strain FORC_075 plasmid pFORC75_2, complete sequence	33473-33506	2	0.941
NC_021842_1	1.1\|4017\|34\|NC_021842\|CRISPRCasFinder	4017-4050	34	NZ_CP044292	Escherichia coli strain P43A plasmid pP43A-1, complete sequence	44259-44292	4	0.882

1. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_KX518744 (Escherichia coli strain HYEC7 plasmid pHYEC7-110, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

2. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP041286 (Escherichia coli strain 54 plasmid p54-tetX, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

3. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_KU321583 (Escherichia coli strain E80 plasmid pE80, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

4. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_KT990220 (Escherichia coli strain 42-2 plasmid p42-2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

5. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP010164 (Escherichia coli strain H2 plasmid A, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

6. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP019647 (Salmonella enterica subsp. enterica serovar Typhimurium strain TW-Stm6 plasmid pSTM6-275, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

7. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP022964 (Salmonella enterica subsp. enterica serovar Pullorum strain QJ-2D-Sal plasmid pQJDsal1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

8. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP024467 (Shigella dysenteriae strain BU53M1 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

9. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_LS999563 (Escherichia coli isolate EC-TO143 plasmid 4, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

10. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_LS999563 (Escherichia coli isolate EC-TO143 plasmid 4, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

11. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP019284 (Escherichia coli strain 13P484A plasmid p13P484A-4, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

12. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP047093 (Salmonella sp. S13 plasmid pS13-4, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

13. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP051432 (Escherichia sp. SCLE84 plasmid pSCLE2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

14. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP046002 (Escherichia coli strain 1916D6 plasmid p1916D6-2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

15. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP045188 (Escherichia coli strain NT1F31 plasmid pNT1F31-tetX4, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

16. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP031548 (Escherichia coli strain cq9 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

17. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP031548 (Escherichia coli strain cq9 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

18. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP032386 (Salmonella enterica subsp. enterica serovar Dublin strain CVM N53043 plasmid pN53043_2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

19. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP032389 (Salmonella enterica subsp. enterica serovar Dublin strain CVM N45955 plasmid pN45955_2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

20. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_LT904873 (Salmonella enterica subsp. enterica serovar Typhi strain ERL11909 plasmid 2) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

21. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_KT754163 (Shigella dysenteriae 1 strain A5468 plasmid pA5468, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

22. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP033383 (Salmonella enterica subsp. enterica strain CFSA300 plasmid pCFSA300-2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

23. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP020836 (Escherichia coli strain CFSAN051542 plasmid pCFSAN051542, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

24. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP038140 (Escherichia coli strain G3X16-2 plasmid pG3X16-2-3, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

25. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP043216 (Salmonella enterica subsp. enterica serovar Heidelberg strain SL-312 plasmid pET8.2-IncX1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

26. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP042617 (Escherichia coli strain NCYU-26-73 plasmid pNCYU-26-73-2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

27. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP031361 (Salmonella enterica subsp. enterica serovar Heidelberg strain 5 plasmid p2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

28. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP044153 (Shigella flexneri strain AR-0425 plasmid pAR-0425-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

29. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP040929 (Escherichia coli strain YY76-1 plasmid pYY76-1-2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

30. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP033386 (Salmonella enterica subsp. enterica strain CFSA1007 plasmid pCFSA1007-2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

31. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP041177 (Salmonella enterica subsp. enterica serovar Enteritidis strain SJTUF12367v2 plasmid p12367A, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

32. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP034761 (Klebsiella pneumoniae strain NB5306 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

33. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP050707 (Salmonella enterica subsp. enterica serovar Enteritidis strain SE124 plasmid pSE124-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

34. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP047339 (Klebsiella pneumoniae strain 2019036D plasmid p2019036D-35kb, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

35. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NC_010860 (Salmonella enterica subsp. enterica serovar Enteritidis plasmid pSE34, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

36. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP022453 (Salmonella enterica subsp. enterica serovar Indiana strain D90 plasmid pD90-3, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

37. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP024153 (Escherichia coli strain 14EC033 plasmid p14EC033f, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

38. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP030208 (Salmonella enterica strain SA19992307 plasmid pSA19992307.1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

39. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP005994 (Salmonella enterica subsp. enterica serovar Heidelberg str. CFSAN002064 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

40. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP032450 (Salmonella enterica subsp. enterica serovar Dublin strain USMARC-69838 plasmid pSDU1-USMARC-69838, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

41. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP010155 (Escherichia coli strain D9 plasmid C, complete genome) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

42. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP050174 (Escherichia coli strain STB20-1 plasmid pSTB20-1T, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

43. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP029061 (Escherichia coli strain FORC_081 plasmid pFORC_081_4, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

44. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP042589 (Escherichia coli strain PK6 plasmid pRHEcCUB-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

45. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP025677 (Escherichia albertii strain ChinaSP140150 plasmid pEA-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

46. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP041453 (Escherichia coli strain YPE3 plasmid pYPE3-92k-tetX4, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

47. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to MN816373 (Escherichia coli strain A127 plasmid pA127-X1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

48. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP052879 (Escherichia coli strain C21 plasmid pC21-2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

49. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP033379 (Escherichia coli strain L73 plasmid pL73-2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

50. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP033632 (Escherichia coli isolate ECCNB12-2 plasmid pTB-nb1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

51. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP050724 (Salmonella enterica subsp. enterica serovar Enteritidis strain SE74 plasmid pSE74-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

52. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP047573 (Escherichia coli strain 2EC1 plasmid p2EC1-2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

53. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NC_019106 (Salmonella enterica subsp. enterica serovar Dublin plasmid pSD_77, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

54. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP010127 (Escherichia coli strain C8 plasmid B, complete genome) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

55. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP027138 (Escherichia coli strain AR_0369 plasmid unnamed2) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

56. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP022072 (Salmonella enterica subsp. enterica serovar Typhimurium strain FDAARGOS_321 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

57. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP043935 (Klebsiella pneumoniae strain 555 plasmid pSCKLB555-3, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

58. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP043935 (Klebsiella pneumoniae strain 555 plasmid pSCKLB555-3, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

59. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP045998 (Escherichia coli strain 1916D18 plasmid p1916D18-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

60. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP032394 (Salmonella enterica subsp. enterica serovar Dublin strain CVM 22453 plasmid p22453_2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

61. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NC_019256 (Shigella sp. LN126 plasmid pLN126_33, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

62. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to MH884649 (Salmonella sp. strain Sa21 plasmid pSa21-IncX1-28K, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

63. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to MH884651 (Salmonella sp. strain Sa21 plasmid pSa21-TC-CIP, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

64. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to MH229869 (Escherichia coli plasmid pKANJ7, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

65. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP050713 (Salmonella enterica subsp. enterica serovar Enteritidis strain SE104 plasmid pSE104-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

66. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP041439 (Escherichia coli strain YPE12 plasmid pYPE12-106k, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

67. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP041443 (Escherichia coli strain YPE12 plasmid pYPE12-101k-tetX4, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

68. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_MK461931 (Escherichia coli strain F2_14D plasmid pF2_14D_HI2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

69. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_MK656937 (Escherichia coli strain T3 plasmid pT3, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

70. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_MK731977 (Escherichia coli strain ENV103 plasmid pSGMCR103, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

71. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_MK673546 (Salmonella enterica subsp. enterica serovar Typhimurium strain GDD27-24 plasmid pGDD27-24, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

72. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP032447 (Salmonella enterica subsp. enterica serovar Dublin strain USMARC-69840 plasmid pSDU1-USMARC-69840, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

73. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_MH179305 (Salmonella enterica subsp. enterica serovar Indiana strain JT01 plasmid pJT01, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

74. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_MH179305 (Salmonella enterica subsp. enterica serovar Indiana strain JT01 plasmid pJT01, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

75. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_MH287085 (Escherichia coli strain F2_12B plasmid pSDC-F2_12BHI2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

76. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_MH287084 (Escherichia coli O157 strain SvETEC plasmid pSDE-SvHI2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

77. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP025558 (Salmonella enterica subsp. enterica serovar Enteritidis strain PIR00532 plasmid p2PIR00532, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

78. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to MT219825 (Escherichia coli strain RW7-1 plasmid pRW7-1_235k_tetX, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

79. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to MT219826 (Escherichia coli strain RW8-1 plasmid pRW8-1_122k_tetX, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

80. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_MG904998 (Escherichia coli strain 15OD0495 plasmid p15ODTXV, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

81. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_MG197491 (Escherichia coli strain FKU92 plasmid pHNFKU92, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

82. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_MG197498 (Escherichia coli strain HZMCC14 plasmid pHNMCC14, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

83. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_MG197503 (Escherichia coli strain ZYTM118 plasmid pHNZY118, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

84. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_MG197495 (Escherichia coli strain AHC24 plasmid pHNAH24, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

85. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_MF589339 (Escherichia coli strain 2271 plasmid pCTXM-2271, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

86. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_MG197502 (Escherichia coli strain ZYTF32 plasmid pHNZY32, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

87. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to MT219818 (Escherichia coli strain RF148-1 plasmid pRF148-1_119k_tetX, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

88. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to MT219820 (Escherichia coli strain RF108-2 plasmid pRF108-2_97k_tetX, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

89. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to MT219822 (Escherichia coli strain RF14-1 plasmid pRF14-1_50k_tetX, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

90. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to MT219823 (Escherichia coli strain RF10-1 plasmid pRF10-1_119k_tetX, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

91. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NC_023323 (Escherichia coli ACN001 plasmid pACN001-A, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

92. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to MF554637 (uncultured bacterium clone AA-100 plasmid pPIMMR, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

93. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP016575 (Salmonella enterica subsp. enterica serovar Heidelberg strain AMR588-04-00435 plasmid pAMR588-04-00435_37, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

94. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP020060 (Escherichia coli strain AR_0061 plasmid unitig_2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

95. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP032994 (Escherichia coli strain W5-6 plasmid p2_W5-6, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

96. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to MN783746 (Escherichia coli plasmid pIncX1_p1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

97. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_KX815983 (Salmonella enterica subsp. enterica serovar Dublin strain N13-01125 plasmid pN13-01125, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

98. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_KU254580 (Escherichia coli strain YD786 plasmid pYD786-3, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

99. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP042633 (Escherichia coli strain NCYU-25-82 plasmid pNCYU-25-82-6, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

100. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP032392 (Salmonella enterica subsp. enterica serovar Dublin strain CVM 34981 plasmid p34981_2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

101. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP019272 (Escherichia coli strain 13P460A plasmid p13P460A-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

102. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP053728 (Escherichia coli strain CP61_Sichuan plasmid pCP61-IncN, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

103. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP037995 (Salmonella enterica subsp. enterica serovar Brancaster strain sg_ww281 plasmid psg_ww281) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

104. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP053740 (Escherichia coli strain CP8-3_Sichuan plasmid pCP8-3-IncX1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

105. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP016580 (Salmonella enterica subsp. enterica serovar Heidelberg strain SH13-006 plasmid pSH13-006_37, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

106. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP046001 (Escherichia coli strain 1916D6 plasmid p1916D6-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

107. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP021103 (Escherichia coli strain 13P477T plasmid p13P477T-7, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

108. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP029182 (Escherichia coli strain H9Ecoli plasmid p3-H9, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

109. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to MN086778 (Escherichia coli plasmid p16EC-IncN, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

110. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP053047 (Escherichia fergusonii strain HNCF11W plasmid pHNCF11W-tetX4, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

111. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP014974 (Salmonella enterica subsp. enterica serovar Typhimurium str. USDA-ARS-USMARC-1898 isolate ST073 plasmid pSTY3-1898, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

112. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP032397 (Salmonella enterica subsp. enterica serovar Dublin strain CVM 22429 plasmid p22429, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

113. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP035774 (Klebsiella pneumoniae strain R46 plasmid pR46-27, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

114. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP044182 (Salmonella enterica subsp. enterica serovar Heidelberg strain AR-0404 plasmid pAR-0404-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

115. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP042608 (Escherichia coli strain NCYU-29-19 plasmid pNCYU-29-19-2_MCR3, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

116. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to MK461930 (Escherichia coli strain 2009_36 plasmid p2009_36_HI2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

117. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NC_019046 (Escherichia coli plasmid pNMEC31_31, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

118. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP047460 (Escherichia coli strain ZF31 plasmid pZF31-tetX-119kb, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

119. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP047466 (Escherichia coli strain ZF34 plasmid pZF34-tetX-114kb, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

120. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP035315 (Escherichia coli strain D72 plasmid pD72-IncX1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

121. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP050748 (Salmonella enterica subsp. enterica serovar Typhimurium strain ST53 plasmid pST53-3, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

122. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NC_024961 (Escherichia coli plasmid pIS15_43, strain ISI5, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

123. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NC_021842 (Salmonella enterica subsp. enterica serovar Heidelberg str. CFSAN002069 plasmid pCFSAN002069_02, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

124. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_LT985261 (Escherichia coli strain 657 plasmid RCS50_p, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

125. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_AP019678 (Escherichia coli strain GSH8M-2 plasmid pGSH8M-2-3, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

126. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP009074 (Escherichia coli ATCC 25922 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

127. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP010168 (Escherichia coli strain H3 plasmid A, complete genome) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

128. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NC_010378 (Escherichia coli plasmid pOLA52, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

129. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to CP016512 (Salmonella enterica subsp. enterica serovar Heidelberg strain SH14-028 plasmid pSH14-028_37, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

130. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP016529 (Salmonella enterica subsp. enterica serovar Heidelberg strain 09-036813-1A plasmid p09-036813-1A_42, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

131. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP016518 (Salmonella enterica subsp. enterica serovar Heidelberg strain CE-R2-11-0435 plasmid pCE-R2-11-0435_37, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

132. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP032988 (Escherichia coli strain BE2-5 plasmid p2_BE2-5, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

133. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP017633 (Escherichia coli strain SLK172 plasmid pSLK172-2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

134. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP012922 (Salmonella enterica subsp. enterica serovar Heidelberg strain SA02DT10168701 plasmid pSA02DT10168701_37, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

135. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP033093 (Escherichia coli strain CP53 plasmid pCP53-38k, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

136. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP012926 (Salmonella enterica subsp. enterica serovar Heidelberg strain 12-4374 plasmid p12-4374_37, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

137. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP023360 (Escherichia coli strain 1943 plasmid p54, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

138. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to CP043734 (Escherichia coli strain CVM N17EC1164 plasmid pN17EC1164-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

139. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP039600 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014867 plasmid p12-6334.1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

140. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP030283 (Escherichia coli strain E308 plasmid pLKSZ02, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

141. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NC_011204 (Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 plasmid pCT02021853_74, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

142. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NC_017624 (Salmonella enterica subsp. enterica serovar Heidelberg str. B182 plasmid pB182_37, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

143. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP050710 (Salmonella enterica subsp. enterica serovar Enteritidis strain SE109 plasmid pSE109-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

144. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP024290 (Escherichia coli O178:H19 strain 2012C-4431 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

145. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP048777 (Salmonella enterica subsp. enterica serovar Agona strain SG17-135 plasmid pSG17-135-X, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

146. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP041631 (Escherichia coli strain PE15 plasmid pPE15-27K, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

147. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP050773 (Salmonella enterica subsp. enterica serovar Indiana strain SI102 plasmid pSI102-2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

148. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP041444 (Escherichia coli strain YPE10 plasmid pYPE10-78k, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

149. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP019180 (Salmonella enterica subsp. enterica serovar Dublin str. ATCC 39184 plasmid pATCC39184, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

150. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP050765 (Salmonella enterica subsp. enterica serovar Indiana strain SI111 plasmid pSI111-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

151. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NC_010422 (Salmonella enterica subsp. enterica serovar Dublin plasmid pOU1115, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

152. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP050759 (Salmonella enterica subsp. enterica serovar Indiana strain SI173 plasmid pSI173-2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

153. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_AP022652 (Escherichia coli strain 09-02E plasmid p2-09-02E, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

154. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP024136 (Escherichia coli strain 14EC017 plasmid p14EC017b, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

155. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_LT985315 (Escherichia coli strain ECOR 70 plasmid RCS99_p, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

156. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to MN436006 (Escherichia coli strain JS1-EC05 plasmid pEC05-X4, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

157. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to MN436007 (Escherichia coli strain JS3-EC12 plasmid pEC12-X4, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

158. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_MK360096 (Salmonella enterica strain 13-SA02717 plasmid pSE13-SA02717, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

159. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP045839 (Citrobacter sp. H12-3-2 plasmid pH12-2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

160. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP032381 (Salmonella enterica subsp. enterica serovar Dublin strain USMARC-69807 plasmid pSDU2-USMARC-69807, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

161. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_MG825381 (Escherichia coli strain 1108 plasmid p1108-NDM, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

162. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to MT197111 (Escherichia coli strain RB3-1 plasmid pRB3-1_31K_tetX, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

163. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to MT219817 (Escherichia coli strain RF148-2 plasmid pRF148-2_101k_tetX, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

164. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to MT219819 (Escherichia coli strain RF52-1 plasmid pRF52-1_119k_tetX, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

165. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to MT219821 (Escherichia coli strain RF45-1 plasmid pRF45-1_31k_tetX, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

166. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_MG288677 (Klebsiella pneumoniae strain F160070 plasmid p160070-CTXM, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

167. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP030195 (Salmonella enterica strain SA20080453 plasmid pSA20080453.1, complete sequence) position: , mismatch: 1, identity: 0.971

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtgattttcatgaaaggtggatggctgcgcac	Protospacer
****.*****************************

168. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP033353 (Salmonella enterica subsp. enterica strain CFSA664 plasmid pCFSA664-1, complete sequence) position: , mismatch: 2, identity: 0.941

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgggc	Protospacer
******************************* .*

169. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP050780 (Salmonella enterica subsp. enterica serovar Indiana strain SI85 plasmid pSI85-1, complete sequence) position: , mismatch: 2, identity: 0.941

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgggc	Protospacer
******************************* .*

170. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP022061 (Salmonella enterica strain FDAARGOS_312 plasmid unnamed2, complete sequence) position: , mismatch: 2, identity: 0.941

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatgggtacgcac	Protospacer
************************** *.*****

171. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to CP048927 (Salmonella enterica subsp. enterica serovar Saintpaul strain NY-N14748 plasmid pN14748, complete sequence) position: , mismatch: 2, identity: 0.941

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatgggtacgcac	Protospacer
************************** *.*****

172. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP029841 (Salmonella enterica subsp. enterica serovar Typhimurium strain 01ST04081 plasmid p01ST04081A, complete sequence) position: , mismatch: 2, identity: 0.941

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatgggtacgcac	Protospacer
************************** *.*****

173. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP028313 (Salmonella enterica subsp. enterica serovar Heidelberg strain CFSAN067218 plasmid pSH-04-2, complete sequence) position: , mismatch: 2, identity: 0.941

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatgggtacgcac	Protospacer
************************** *.*****

174. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP018662 (Salmonella enterica subsp. enterica serovar Enteritidis strain 95-0621 plasmid pSE95-0621-1, complete sequence) position: , mismatch: 2, identity: 0.941

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatgggtacgcac	Protospacer
************************** *.*****

175. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to CP049987 (Salmonella enterica subsp. enterica serovar Saintpaul strain CVM N16S133 plasmid pN16S133, complete sequence) position: , mismatch: 2, identity: 0.941

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatgggtacgcac	Protospacer
************************** *.*****

176. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to CP049982 (Salmonella enterica subsp. enterica serovar Saintpaul strain CVM N52030 plasmid pN52030, complete sequence) position: , mismatch: 2, identity: 0.941

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatgggtacgcac	Protospacer
************************** *.*****

177. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NC_010421 (Salmonella enterica subsp. enterica serovar Dublin plasmid pOU1114, complete sequence) position: , mismatch: 2, identity: 0.941

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatgggtacgcac	Protospacer
************************** *.*****

178. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_MK625201 (Salmonella enterica subsp. enterica serovar Pullorum strain S9804 plasmid pSPUR, complete sequence) position: , mismatch: 2, identity: 0.941

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatgggtacgcac	Protospacer
************************** *.*****

179. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP023476 (Salmonella enterica subsp. enterica serovar Enteritidis strain FORC_075 plasmid pFORC75_2, complete sequence) position: , mismatch: 2, identity: 0.941

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatgggtacgcac	Protospacer
************************** *.*****

180. spacer 1.1|4017|34|NC_021842|CRISPRCasFinder matches to NZ_CP044292 (Escherichia coli strain P43A plasmid pP43A-1, complete sequence) position: , mismatch: 4, identity: 0.882

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgttcga	Protospacer
*****************************. *.

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NC_021812

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NC_021812_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_021812_1

3292781-3292890

Orphan

Consensus_repeat	Method
TTAAAAAAAGGTGGTACAGGGTGGGACA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_021812_1

>merge|NC_021812|1|3292781-3292890|CRISPRCasFinder
TTAAAAAAAGGTGGTACAGGGTGGGACAAGTGGTACACGCAGAGCTGGCGAGGGTTACAGCGTCCCACCTTAGAGAATTTGATTAAAAAAAAGTGGTACAGGGTGGGACA

>NC_021812|1|1|3292781-3292890|CRISPRCasFinder
TTAAAAAAAGGTGGTACAGGGTGGGACA	AGTGGTACACGCAGAGCTGGCGAGGGTTACAGCGTCCCACCTTAGAGAATTTGA
TTAAAAAAAAGTGGTACAGGGTGGGACA

Protein	Signature genes	Signature genes Name	Protein_function
NC_021812.2\|WP_000973738.1\|3296930_3297305_+\|PTS-glucitol/sorbitol-transporter-subunit-IIA	unknown	unknown	gnl\|CDD\|226254
NC_021812.2\|WP_000889012.1\|3299600_3300803_+\|DUF3883-domain-containing-protein	unknown	unknown	gnl\|CDD\|379021
NC_021812.2\|WP_001161781.1\|3289164_3289992_-\|hypothetical-protein	unknown	unknown	unknown
NC_021812.2\|WP_001520831.1\|3293265_3294549_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|226459
NC_021812.2\|WP_010989063.1\|3286653_3287247_+\|hypothetical-protein	unknown	unknown	unknown
NC_021812.2\|WP_001542209.1\|3286439_3286607_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|170049
NC_021812.2\|WP_010989065.1\|3295564_3295921_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NC_021812.2\|WP_000196159.1\|3281409_3283590_+\|type-I-secretion-system-permease/ATPase	unknown	unknown	gnl\|CDD\|274550
NC_021812.2\|WP_001520307.1\|3290693_3292763_+\|DUF927-domain-containing-protein	unknown	unknown	gnl\|CDD\|227806
NC_021812.2\|WP_001098984.1\|3297301_3298282_+\|PTS-glucitol/sorbitol-transporter-subunit-IIB	unknown	unknown	gnl\|CDD\|226255
NC_021812.2\|WP_010989057.1\|3283597_3284761_+\|HlyD-family-type-I-secretion-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|130902
NC_021812.2\|WP_000776032.1\|3300876_3301512_-\|3-hexulose-6-phosphate-synthase	unknown	unknown	gnl\|CDD\|132172
NC_021812.2\|WP_000701821.1\|3290442_3290658_+\|AlpA-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225848
NC_021812.2\|WP_000749979.1\|3296015_3296300_+\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|225957
NC_021812.2\|WP_000248794.1\|3287636_3288830_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376935
NC_021812.2\|WP_000480483.1\|3296412_3296934_+\|PTS-sorbitol-transporter-subunit-IIC	unknown	unknown	gnl\|CDD\|226253
NC_021812.2\|WP_001542208.1\|3285361_3286426_+\|tyrosine-type-recombinase/integrase	unknown	unknown	gnl\|CDD\|170049
NC_021812.2\|WP_001033832.1\|3298292_3299306_+\|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|223745
NC_021812.2\|WP_010989064.1\|3294593_3295412_+\|DUF4435-domain-containing-protein	unknown	unknown	gnl\|CDD\|373095
NC_021812.2\|WP_000533858.1\|3280003_3281413_+\|TolC-family-outer-membrane-protein	unknown	unknown	gnl\|CDD\|273829

Protein	Function_ID	Function_description	E-value
NC_021812.2\|WP_000973738.1\|3296930_3297305_+\|PTS-glucitol/sorbitol-transporter-subunit-IIA	gnl\|CDD\|226254	COG3731, SrlB, Phosphotransferase system sorbitol-specific component IIA [Carbohydrate transport and metabolism].	5.89598e-59
NC_021812.2\|WP_000889012.1\|3299600_3300803_+\|DUF3883-domain-containing-protein	gnl\|CDD\|379021	pfam13020, DUF3883, Domain of unknown function (DUF3883). This is a domain is uncharacterized. It is found on restriction endonucleases.	6.01438e-16
NC_021812.2\|WP_000776032.1\|3300876_3301512_-\|3-hexulose-6-phosphate-synthase	gnl\|CDD\|132172	TIGR03128, RuMP_HxlA, 3-hexulose-6-phosphate synthase. Members of this protein family are 3-hexulose-6-phosphate synthase (HPS), or the HPS domain of a fusion protein. This enzyme is part of the ribulose monophosphate (RuMP) pathway, which in one direction removes the toxic metabolite formaldehyde by assimilation into fructose-6-phosphate. In the other direction, in species lacking a complete pentose phosphate pathway, the RuMP pathway yields ribulose-5-phosphate, necessary for nucleotide biosynthesis, at the cost of also yielding formaldehyde. These latter species tend usually have a formaldehyde-activating enzyme to attach formaldehyde to the C1 carrier tetrahydromethanopterin. In these species, the enzyme is viewed as a lyase rather than a synthase and is called D-arabino 3-hexulose 6-phosphate formaldehyde lyase. Note that there is some overlap in specificity with the Escherichia coli enzyme 3-keto-L-gulonate 6-phosphate decarboxylase.	4.14833e-98
NC_021812.2\|WP_001520831.1\|3293265_3294549_+\|AAA-family-ATPase	gnl\|CDD\|226459	COG3950, COG3950, Predicted ATP-binding protein involved in virulence [General function prediction only].	0
NC_021812.2\|WP_010989057.1\|3283597_3284761_+\|HlyD-family-type-I-secretion-periplasmic-adaptor-subunit	gnl\|CDD\|130902	TIGR01843, Hemolysin_secretion_protein_D_plasmid, type I secretion membrane fusion protein, HlyD family. Type I secretion is an ABC transport process that exports proteins, without cleavage of any signal sequence, from the cytosol to extracellular medium across both inner and outer membranes. The secretion signal is found in the C-terminus of the transported protein. This model represents the adaptor protein between the ATP-binding cassette (ABC) protein of the inner membrane and the outer membrane protein, and is called the membrane fusion protein. This model selects a subfamily closely related to HlyD; it is defined narrowly and excludes, for example, colicin V secretion protein CvaA and multidrug efflux proteins. [Protein fate, Protein and peptide secretion and trafficking].	3.18004e-97
NC_021812.2\|WP_001520307.1\|3290693_3292763_+\|DUF927-domain-containing-protein	gnl\|CDD\|227806	COG5519, COG5519, Superfamily II helicase and inactivated derivatives [DNA replication, recombination, and repair].	0
NC_021812.2\|WP_000196159.1\|3281409_3283590_+\|type-I-secretion-system-permease/ATPase	gnl\|CDD\|274550	TIGR03375, type_I_sec_LssB, type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis].	0
NC_021812.2\|WP_010989065.1\|3295564_3295921_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	2.55924e-09
NC_021812.2\|WP_001098984.1\|3297301_3298282_+\|PTS-glucitol/sorbitol-transporter-subunit-IIB	gnl\|CDD\|226255	COG3732, SrlE, Phosphotransferase system sorbitol-specific component IIBC [Carbohydrate transport and metabolism].	1.31232e-179
NC_021812.2\|WP_001542209.1\|3286439_3286607_+\|hypothetical-protein	gnl\|CDD\|170049	PRK09692, PRK09692, integrase; Provisional.	2.20982e-13
NC_021812.2\|WP_000701821.1\|3290442_3290658_+\|AlpA-family-transcriptional-regulator	gnl\|CDD\|225848	COG3311, AlpA, Predicted transcriptional regulator [Transcription].	2.37497e-21
NC_021812.2\|WP_000749979.1\|3296015_3296300_+\|transcriptional-regulator	gnl\|CDD\|225957	COG3423, Nlp, Predicted transcriptional regulator [Transcription].	5.31271e-38
NC_021812.2\|WP_000248794.1\|3287636_3288830_+\|hypothetical-protein	gnl\|CDD\|376935	pfam02810, SEC-C, SEC-C motif. The SEC-C motif found in the C-terminus of the SecA protein, in the middle of some SWI2 ATPases and also solo in several proteins. The motif is predicted to chelate zinc with the CXC and C[HC] pairs that constitute the most conserved feature of the motif. It is predicted to be a potential nucleic acid binding domain.	3.20348e-07
NC_021812.2\|WP_000480483.1\|3296412_3296934_+\|PTS-sorbitol-transporter-subunit-IIC	gnl\|CDD\|226253	COG3730, SrlA, Phosphotransferase system sorbitol-specific component IIC [Carbohydrate transport and metabolism].	2.29561e-79
NC_021812.2\|WP_001542208.1\|3285361_3286426_+\|tyrosine-type-recombinase/integrase	gnl\|CDD\|170049	PRK09692, PRK09692, integrase; Provisional.	1.47537e-117
NC_021812.2\|WP_001033832.1\|3298292_3299306_+\|Gfo/Idh/MocA-family-oxidoreductase	gnl\|CDD\|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	9.77409e-67
NC_021812.2\|WP_010989064.1\|3294593_3295412_+\|DUF4435-domain-containing-protein	gnl\|CDD\|373095	pfam14491, DUF4435, Protein of unknown function (DUF4435). This presumed domain is functionally uncharacterized. This domain is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 285 and 362 amino acids in length. This domain is sometimes associated with AAA domains.	2.33424e-50
NC_021812.2\|WP_000533858.1\|3280003_3281413_+\|TolC-family-outer-membrane-protein	gnl\|CDD\|273829	TIGR01844, Proteases_secretion_protein_PrtF, type I secretion outer membrane protein, TolC family. Members of this model are outer membrane proteins from the TolC subfamily within the RND (Resistance-Nodulation-cell Division) efflux systems. These proteins, unlike the NodT subfamily, appear not to be lipoproteins. All are believed to participate in type I protein secretion, an ABC transporter system for protein secretion without cleavage of a signal sequence, although they may, like TolC, participate also in the efflux of smaller molecules as well. This family includes the well-documented examples TolC (E. coli), PrtF (Erwinia), and AprF (Pseudomonas aeruginosa). [Protein fate, Protein and peptide secretion and trafficking, Transport and binding proteins, Porins].	5.87074e-128

>NC_021812.2|WP_001520307.1|3290693_3292763_+|DUF927-domain-containing-protein
MKRAPFLCKQSPDRTLEVVILAGSLAWETSRVWRKDPDREDDVPPMVLGPNELADLSNLTIIRPDTLYVRVLRTGDISEEDLLKIAVKLAHAGVQMARLMSPDGELLENWTGQLERLRQERPSDILPDHFRLDEEALWFDKLTERRDGESDVQPQRICSPLRVTAITCDSHDGSYGRLLEWHTTTGQLRRWAMPMAMLSGNGEELRRILLENGLTNISTRPALRSLLCEYISRSLPGRRVTCVEKTGWHNGVYVLPDEVIGPDGDNVILQGSHYLTGGFAQAGTLAEWQEQVAALCAGNSRLVFAVCCALAAPLLRLTGTGGGGFHLRGESTDGKTTVMKVAASVCGGTDYWHSWRATGNALEGIASRHNDALLPLDELREVDPREAGMIAYMLANGQGKGRARTDGEVRNRRHWTLLLFSTGELSLAEHTERAGERIYAGMDVRMVQIPSDTGQHGAFEQLHGFASGQQFADTLCDRVARFHGTAFRAWLAFLTHDQDASTTLARELLRRYQNALMPDNAGNQVQRIVARFALLAAAGEIATLHGITGWQKGTAYEAVQICLHAWLNERGHIANQEDEGVLAQIKRFITAHQYSRFASWDGPDRPLNMAGFRRVEKDPLTGEEHTLFFILPEGWREICRGFSPARAARLCQEAECLQPGSDGKYQSQVRLPEIGKTRVYRLTSRILSI
>NC_021812.2|WP_000701821.1|3290442_3290658_+|AlpA-family-transcriptional-regulator
MKIRADSNDAFPESGNVRMRQVVQFLAMSESSVYRLIKDTDFPRPVHLSSRLVVFDAAEIRQWQQRRTVIR
>NC_021812.2|WP_001161781.1|3289164_3289992_-|hypothetical-protein
MQGLTMDDISLSIARNMFHLQVYESDGVRFEDLFSKIMYYKSPDFQQVKPYGNIGDRKNDGFIKGQGVYYQVYAPEDASNNVLAAVNKIKDDFEGLRDYWHDICPIKKYYFVLNDKYKGSLPQLHKELIVLQSDFNLIDTGVIVAKDLERELFNLPDDMIRSVVGHLPDIDHEEYMFVSGFTCFISAWINFEKIARHKVFSAKQPNRPLFIGKVVNALVKNKIISRQDATFIKKITEVRNSLVHGVSMLVPKKNEIDMLIFITEKIKPAGVCRLD
>NC_021812.2|WP_000248794.1|3287636_3288830_+|hypothetical-protein
MVNYPYFSVNVLSGSINFVENDKVKLGRNDKCWCKSGLKYKKCHLDRDREMPVSKAEALKFSKSNSQRKACYAPASMHEDCDKRIVQAHTLSKSSSLKAIADSSNHVMGVVMNLPSLIKNNGRWVPEKIGINQASTFTGFCAVHDRILFSCLENEKFTGTDEQCFALMFRSLSKEIYAKEGGRRSSDFAKNADKGKLQAEQVYIQEFVSLHQSGLNAAITELNNLKTSLDRILLNRQFSEIESVVFTFSEPLPIAVSSILSPERDFDGTKIQDLNDLTVSAEQVCFNAFSSEGKGYVVFSWLGTSAIIRRFVRSLIKVQTDRIFNTLLYFFFTKAENTYSSPEWWDSLSDKQRENIGNMIMSGVDFFDNSTLRVDHSVDYNSAALAEIRYSNSEISS
>NC_021812.2|WP_010989063.1|3286653_3287247_+|hypothetical-protein
MPLLEARHLALLLLGLDASQPANALPEEHQENYRILHDAISRTIKATGMVSAPANKRMFYADEMFALAWRLIDDELTPSEVKDRSLKAVMKLSRNSRGRKWLKTLGDDALPDLTASTQPSLRGMHKRDKARENTARLCWLLVQLLVEETDGRYGTSDKPASDQILRKLKTLAKEQELPSDGLGRGTFYEVLKMEREK
>NC_021812.2|WP_001542209.1|3286439_3286607_+|hypothetical-protein
MLAHQKEDEIEAAYNRSDYLEQRRPLMQWWGNYVDAARRQALLGAEEPLQIVEGE
>NC_021812.2|WP_001542208.1|3285361_3286426_+|tyrosine-type-recombinase/integrase
MPNQLKPLTNVEIAGAKPRSTDYELRDGEGLYLLVKTSGRKAWHFEYYHPVTKKRTKTSLGPYPVVTLAMARETRTKYRRLLYQGIDPRQHLAGIAEEKRIQNECTLEKVAEQWLKEKKRTSDLSEDHAKDVWRSLEMHVFPSLGNTPVTEIRPKMLKEHLTPLEEQGILETLRRVISRLNEIFRFAISEELIEFNPADNLVARFKKPKKQNMPALHPSELGRLMLALQNASIRKETRCLIEWELLTWVRPGEAVSARWCDIDMKKAEWRIPDTFMKMNRSHTVPLSKQALRVLQIMEPVSRHRPWVFPSIRKPLEHMHQQTANAALIRMGFGGELVAHGMRSRQDRRRRSFSP
>NC_021812.2|WP_010989057.1|3283597_3284761_+|HlyD-family-type-I-secretion-periplasmic-adaptor-subunit
MDDPDIQRERAFSGAGRIVLICSLLFLILGIWAWFGRLDEVSTGNGKVIPSSREQVLQSLDGGILAQLTVREGDRVQANQIVARLDPTRLASNVGESAAKYRASLASSARLTAEVNDLPLAFPAELNGWPDLIAAETRLYKSRRAQLADTEAELRDALASVNKELAITQRLEKSGAASHVEVLRLQRQKSDLGLKITDLRSQYYVQAREALSKANAEVDMLSAILKGREDSVTRLTVRSPVRGIVKNIQVTTIGGVIPPNGEMMEIVPVDDRLLIETRLSPRDIAFIHPGQRALVKITAYDYAIYGGLDGVVETISPDTIQDKVKPEIFYYRVFIRTHQDYLQNKSGRRFSIVPGMIATVDIKTGEKTIVDYLIKPFNRAKEALRER
>NC_021812.2|WP_000196159.1|3281409_3283590_+|type-I-secretion-system-permease/ATPase
MTRAAPDVEEVLSERALSQWAQAISYVAGHYRVACSPGSIQANAPWLRGKSRTTALTQLARQAGLSFHAPDIDKTAFSQWRLPLVVELRDGQLLVIEHVNGEEAVDVFVIEEEGQRNRLTLSELLPEILYVAALRPLSALKDSRVDRYISRFKPDWMRELVLQDIRPYLPVMVAAFLINVLSLAGIVFSMQVYDRVIPAQSYPTLYVLSFGVLVAVLFGFLLREARTHIMDVLGKRADMRISDRVFGHALRLRNSAIPRSTGSFISQLRELEQIREMITSSTLATIVDLPFFFLFMIVLAIIAPPLAWIAPVAALLMILPGVALQKKLAVLANQAAHEATLRNAVLVESVQGLEDIKLMQAENRFLQQWNSYIRITGESGLRTRKLTQGLISWGMSVQSLVYAAVIMFGAPMVIEGSMTTGAVVAASMLGSRMIAPMANLCGVLARWQQVKAAKMGLDNIMQLPTETQHDDSLIHRDILHGHYLFENAQFRYHNDDQRIPLRLVRLEIMPGERIAILGRNGAGKSTLLQAMAGGLEMIQGDARLDNLSLSHIDMADLRRNIGFLSQNARLFFGTLRENLTLGAPHANDEQIFDALEVSGGAVFVRRLAKGLDHPIMEGGNGLSGGQRQSLLLARMLLRSPNIVLLDEPSASLDEHTEREFIQRLHQWLGNRTLVVATHRVPILELVERVVVLKEGQLVMDAPKAQALNADRMQSHRREWKNENQSA
>NC_021812.2|WP_000533858.1|3280003_3281413_+|TolC-family-outer-membrane-protein
MGRVAPVAIVLAFALFHHQPRGAEAPPMITSEGLATDQMLPSLDGSAAELPLSAAAPGNLTLNDAVNRAVNWHPSIREAIGKLLAQNEQIEVAKSKYYPQVSAGVNNGYSNTYTDHGYSPSLVLSVSQMLYDFGKVASQVRAETAGAAQQQANVLLSIDTVAHETANAIVQTQSWQQMVEAAEEQLVALDSIGKLIRQRSDEGATSLSDVVQTEARIESARSQLAQYQANLDSAKASLMSWLGWNSLNGINNDFPAKLARSCETATPDDRLVPAVLAAWAQANVARANLDYASAQMTPTISLEPSVQHYLNDKYPSHEVLDKTQYSTWVKVEMPLYQGGGLTARRNAASHAVDAAQSTIQRTRLDVRQKLMEARSQAMSLASALQILRRQQQLSERTRELYQQQYLDLGSRPLLDVLNAEQEVYQARFAELQTESQLHQLQLNCLYNTGALRQAFALNHRSIQSVEIQP
>NC_021812.2|WP_001520831.1|3293265_3294549_+|AAA-family-ATPase
MELRRISVNNLFGILNYDIDLGNSETIIITGPNGYGKTMLLKIIDNILNKNIDFFFDLRFEEIKFELDTILLCIEKQKNKNVAVTVVDYVNDKKRQEVFTLNKNKELDVDYFDEIYNKLLICDNIDSDPILKSYNHEEILNYYKIKKIKLHKEKHHKSDFLDKSIPNAELTFIKAQRIENIKNEKSAIESQANFLLELIKRAAEESAQISQRLDSTFPARLFDSINENISSTSINDRLIGIQRKRELFMKFGIIKSEDTFIPRKFSNATLGKEYSTVLNLYISDALEKLSPYEELFEKINLFVNLLNEKMLAFKEIKISNEHGFYFQSDNGERISLSNLSSGEQNQIVIYFDLIFKAKQNSVILIDEPEISLHVAWQKEFLDSIARIQKLNEFSKIIIATHSPQIVNNNWDITYDLFENNNKNMEGQ
>NC_021812.2|WP_010989064.1|3294593_3295412_+|DUF4435-domain-containing-protein
MLLLFRSPKYSRKIFFTLEGESDIRFLNTHFADERIHYDSPCSGKPEVINAVQLLRSHGKQNVYGLCDADFDILEGNSYENIHFTDCHDLEMMLIEGGSFDKFISEFLKTSILRIHTLEDIRNNLKESIIDVTYKIGILKWLNFKNNLLLMFKGMKYDNFITFVDFSANIDIDNYIQHILDRSPRKPPHCDFNFLKKEYQLLYNKQADYKYVCNGHDFTYITMMAFHSEFSRDKNITQEKVESHLRIAYSATAFQRTNIYNELSGLIDSHNI
>NC_021812.2|WP_010989065.1|3295564_3295921_-|helix-turn-helix-transcriptional-regulator
MPEDGCCPERDNSCMFRCRIAIVIGKRLKISRVRADLTQAELGALAGLDEESASARISSYEKEVHAPDFKLVCKLAAALDVPEAYFYAVDDELAELILQYHRFKKNNPGSTLILSGNI
>NC_021812.2|WP_000749979.1|3296015_3296300_+|transcriptional-regulator
MKKSTTKDWHPADIVAALHKRGTSLAKLSREAGLASSTLSNTLTRPWPKGEWLIAIALDMHPSEIWPGRYLNSSNKREPRKPLHPMTTTDNSGT
>NC_021812.2|WP_000480483.1|3296412_3296934_+|PTS-sorbitol-transporter-subunit-IIC
MFLVSLAEGFIHLFQAAGKIFLDMMTGLIPMLICLLLAINFLMKLVGTVRMEKVAALLGRSRILTYGVLPVLGWFFMSSPGALTLGKLLPEKSKPGYEDALGTTAHPLTSLFPHVVPSELFVWLGVAAGVKALGLPVTSLALRYIAAAMLIGLIRGIITEYLFLRLSRRGNAP
>NC_021812.2|WP_000973738.1|3296930_3297305_+|PTS-glucitol/sorbitol-transporter-subunit-IIA
MMIYCARITAIGLFVADGLTDKMLITFDSNGPKDCLDYSLSLEPSFREESLMILPGDRLLLAGHDYLVTAVGKGVQQALFELGHLTLVFDGDLKPCHTGAIHLSGPVPKLHDLHGNLVIEEGRP
>NC_021812.2|WP_001098984.1|3297301_3298282_+|PTS-glucitol/sorbitol-transporter-subunit-IIB
MNTVLIPPGPGGYGKGLWLPVASGKKVLSLTGREIHPVAIEIGALTESEVVNGFSDIPPDNDILCVVINCAGSLRCGLYPQKGIPTINVLPTWRAGPLAQFISEDNYVSGVTIEQLVLVDTAEAPDGEPEPVSVTAPRIITTPPPARGAEKLVRMVERTGTAVGHVIALLFAASREAVDVSLRNVIPFMAFVSLLIALVQETALGSLIAHALTPLANSLWGLVLLSLICGIPFLSPVLGPGAAISQVIGVMIGTQIGAGAISPAFALPALFAINVQVGCDFVPVGLSMQEAKPETIAKGVPAFLLSRQLTGPLAVIIGWLFSLGLF
>NC_021812.2|WP_001033832.1|3298292_3299306_+|Gfo/Idh/MocA-family-oxidoreductase
MNKIRAAVVGAGIYGKHHMNAYRHNPDTVLVAICDTDTERCDDLAMAYGIQGYTRLDRLLQQEAIDIVSVATPDPYHTESILTALRHGQHVLAEKPLATSVRECELIVEMAQQRDLLVGVDFHKRWDPAVMRIKAELENPETGCILRGHISMDDVITVPTQWLNWAGASSPVWFLGSHCFDLVRHLSGQEVVSVYAVGQKRLMVECGLDTFDSVQSLLTMADGSSWGVENSWVLPEGFPKDNDGRIDILCEATYIRSTSQHRGLEITTPALTLTPNSYFINYRNGVASGFGIDPINDFVRAVRHKAPYPVTAEDGLAVSRICEAVHRSLESGKPEDV
>NC_021812.2|WP_000889012.1|3299600_3300803_+|DUF3883-domain-containing-protein
MLEFHNVPLKTILRRAIMSLPTNFNDILRFFEKDYDTAKEDNALSARGQFLQLYPLNHLKKMTLDDYVIGKGTASFCACVEVKTRTWANMQGATALKFGIYYGKSKSDPTVRYRFTQKFGDDDSTNKEVFANVKDALLDLIQSGKELDFRAIDENPLSQMFKAKILSLYFPEHFINICSKDHLKEIAMEMGIKEQQFISKYQHLLFKKKLEHKITRNWSNPKYMSFLYAQFIRKDLSSAPAVIVKKPQKRNHPEVNFEEITDNRDLIGKKSEEYALNWEKNRLIGLGYSKLAEEIDDRRNRPTYGYDFLSFNAPGDERYIEVKSIGRDGKEGAFRFFLSGNELTVSNLSNHSKNYYFYLVQYGKDGEPCNLYVKHAQDLYTNSEMSPCAYVVRFDLEEPA
>NC_021812.2|WP_000776032.1|3300876_3301512_-|3-hexulose-6-phosphate-synthase
MKLQLALDELTLPEAMVFMDKVVDDVDIIEVGTPFLIREGVNAIKAIKEKYPHKEVLADAKIMDGGHFESQLLFDAGADYVTVLGVTDVLTIQSCIRAAKEAGKQVVVDMICVDDLPARVRLLEEAGADMLAVHTGTDQQAAGRKPIDDLITMLKVRRKARIAVAGGISSQTVKDYALLGPDVVIVGSAITHAADPAGEARKISQVLLQHH

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Crispr_ID: NC_021812_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_021812_2

3483903-3485559

TypeI-E

I-E

Consensus_repeat	Method
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRISPRCasFinder
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	PILER-CR
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRISPRCasFinder

26 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

The CRISPR arrays of NC_021812_2

>merge|NC_021812|2|3483903-3485559|CRISPRCasFinder,CRT,PILER-CR,CRT,CRISPRCasFinder
GTGTTTATCCCCGCTGGCGCGGGGAACATTTTTCAGCCCTTGTCGACTGCGGAACGCCCCTCGGTTTATCCCCGCTGGCGCGGGGAACACGCGAAATAGTGGGGAAAAACCCCTGGTTAACCCGGTTTATCCCCGCTGGCGCGGGAAACACTAGGCCTTGATACCATCGCTCGCACCTCGTCACGGTTTATCCCCGCTGGCGCGGGGAACACGTTTATTACTGCTTAGTTAATTAATGGGTTGCCGGTTTATCCCCGCTGGCGCGGGGAACACTCTTTTGATTTTGCTGCGATGTTATAACCAGACGGTTTATCCCCGCTGGCGCGGGGAACACTATCCACATATACCCGCAATCATATTCAAGAACGGTTTATCCCCGCTGGCGCGGGGAACACAATCACTGCGGGGGTATTTAGCGGAAACGGCTCGGTTTATCCCCGCTGGCGCGGGGAACACGATCGAGTAACGTGCGCTGGAACGCGTCGGCGCGGGGAACACAATTAAAGCCGAGGGTGGCACCGCGCCTTATTCGGTTTATCCCCGCTGGCGCGGGGAACACGTTACGTTCGGTAAATGGAAAGCGGCGAATATCGGTTTATCCCCGCTGGCGCGGGGAACACCCAGAAAGTGCCGGTAGTGCCTGATGAACGACCGGTTTATCCCCGCTGGCGCGGGGAACACCGCGCCCACTTCCGTAAAATACAGATAATCCACGGTTTATCCCCGCTGGCGCGGGGAACACACCGTTCCGGTATGATCGAAGATACGGCAAACCGGTTTATCCCCGCTGGCGCGGAGAACACGGCAGCGGGCGAGGCAAACACATTCGGGGCGTCGGTTTATCCCCGCTGGCGCGGGGAACACGGTAATTTCTCATCTAACAGCCTGTACGCCTCAGGTTTATCCCCGCTGGCGCGGGGAACACGAATCTAATGCAACAGATGAATAAACACGTAACGGTTTATCCCCGCTGGCGCGGGGAACACTCTTTATCGTCAATGCGAAATTTTCCGCGACGCGGTTTATCCCCGCTGGCGCGGGGAACACTCCCATTCACCAACAACAATATCGCCCTGCAACGGTTTATCCCCGCTGGCGCGGGGAACACCGTTGCGTCAGGTTGATCCAGTGCGTCAGCGGCGGTTTATCCCCGCTGGCGCGGGGAACACTGATGAAATCGTCAATAAAATTATTGGCGCGCCGGTTTATCCCCGCTGGCGCGGGGAACACACCACCGGAGCCATCGCCCAACACAGAGCCGCCGGTTTATCCCCGCTGGCGCGGGGAACACGGCAAACCCGCAAGGCCCGTATATGGATTTAACGGTTTATCCCCGCTGGCGCGGGGAACACAACCAATCCAGGCGATAAGAGGCGATTAAAGGCGGTTTATCCCCGCTGGCGCGGGGAACACTCTCGGTCTCGGTCTCGGTCTCGGTAGTGACGCGGTTTATCCCCGCTGGCGCGGGGAACACATTTTATTTGACAAATTGGCGGCATCTCACTGCGGTTTATCCCCGCTGGCGCGGGGAACACCACCACACATAATGATTACTCCACTACCCAGCCGGTTTATCCCCGCTGGCGCGGGGAACACACTGCTTATCATTGATTTTATTGATTTTTCCCCGGTTTATCCCCGCTGGCGCGGGGAACAC

>NC_021812|2|2|3483903-3484359|CRISPRCasFinder
GTGTTTATCCCCGCTGGCGCGGGGAACAT	TTTTCAGCCCTTGTCGACTGCGGAACGCCCCT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCGAAATAGTGGGGAAAAACCCCTGGTTAACC
CGGTTTATCCCCGCTGGCGCGGGAAACAC	TAGGCCTTGATACCATCGCTCGCACCTCGTCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTTTATTACTGCTTAGTTAATTAATGGGTTGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCTTTTGATTTTGCTGCGATGTTATAACCAGA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TATCCACATATACCCGCAATCATATTCAAGAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AATCACTGCGGGGGTATTTAGCGGAAACGGCT
CGGTTTATCCCCGCTGGCGCGGGGAACACGATCGAGTAACGTGCGCTGGAACGCGTCGGCGCGGGGAACACAATTAAAGCCGAGGGTGGCACCGCGCCTTATTCGGTTTATCCCCGCTGGCGCGGGGAACAC	GTTACGTTCGGTAAATGGAAAGCGGCGAATAT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CCAGAAAGTGCCGGTAGTGCCTGATGAACGAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGCGCCCACTTCCGTAAAATACAGATAATCCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ACCGTTCCGGTATGATCGAAGATACGGCAAAC
CGGTTTATCCCCGCTGGCGCGGAGAACAC	GGCAGCGGGCGAGGCAAACACATTCGGGGCGT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGTAATTTCTCATCTAACAGCCTGTACGCCTC
AGGTTTATCCCCGCTGGCGCGGGGAACAC	GAATCTAATGCAACAGATGAATAAACACGTAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCTTTATCGTCAATGCGAAATTTTCCGCGACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCCCATTCACCAACAACAATATCGCCCTGCAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGTTGCGTCAGGTTGATCCAGTGCGTCAGCGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGATGAAATCGTCAATAAAATTATTGGCGCGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ACCACCGGAGCCATCGCCCAACACAGAGCCGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGCAAACCCGCAAGGCCCGTATATGGATTTAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AACCAATCCAGGCGATAAGAGGCGATTAAAGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCTCGGTCTCGGTCTCGGTCTCGGTAGTGACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATTTTATTTGACAAATTGGCGGCATCTCACTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CACCACACATAATGATTACTCCACTACCCAGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ACTGCTTATCATTGATTTTATTGATTTTTCCC


>NC_021812|2|1|3483903-3484358|CRT
GTGTTTATCCCCGCTGGCGCGGGGAACAT	TTTTCAGCCCTTGTCGACTGCGGAACGCCCCT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCGAAATAGTGGGGAAAAACCCCTGGTTAACC
CGGTTTATCCCCGCTGGCGCGGGAAACAC	TAGGCCTTGATACCATCGCTCGCACCTCGTCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTTTATTACTGCTTAGTTAATTAATGGGTTGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCTTTTGATTTTGCTGCGATGTTATAACCAGA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TATCCACATATACCCGCAATCATATTCAAGAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AATCACTGCGGGGGTATTTAGCGGAAACGGCT
CGGTTTATCCCCGCTGGCGCGGGGAACACGATCGAGTAACGTGCGCTGGAACGCGTCGGCGCGGGGAACAC	AATTAAAGCCGAGGGTGGCACCGCGCCTTATT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTTACGTTCGGTAAATGGAAAGCGGCGAATAT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CCAGAAAGTGCCGGTAGTGCCTGATGAACGAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGCGCCCACTTCCGTAAAATACAGATAATCCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ACCGTTCCGGTATGATCGAAGATACGGCAAAC
CGGTTTATCCCCGCTGGCGCGGAGAACAC	GGCAGCGGGCGAGGCAAACACATTCGGGGCGT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGTAATTTCTCATCTAACAGCCTGTACGCCTC
AGGTTTATCCCCGCTGGCGCGGGGAACAC	GAATCTAATGCAACAGATGAATAAACACGTAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCTTTATCGTCAATGCGAAATTTTCCGCGACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCCCATTCACCAACAACAATATCGCCCTGCAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGTTGCGTCAGGTTGATCCAGTGCGTCAGCGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGATGAAATCGTCAATAAAATTATTGGCGCGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ACCACCGGAGCCATCGCCCAACACAGAGCCGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGCAAACCCGCAAGGCCCGTATATGGATTTAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AACCAATCCAGGCGATAAGAGGCGATTAAAGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCTCGGTCTCGGTCTCGGTCTCGGTAGTGACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATTTTATTTGACAAATTGGCGGCATCTCACTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CACCACACATAATGATTACTCCACTACCCAGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ACTGCTTATCATTGATTTTATTGATTTTTCCC


>NC_021812|2|1|3483964-3485559|PILER-CR
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCGAAATAGTGGGGAAAAACCCCTGGTTAACC
CGGTTTATCCCCGCTGGCGCGGGAAACAC	TAGGCCTTGATACCATCGCTCGCACCTCGTCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTTTATTACTGCTTAGTTAATTAATGGGTTGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCTTTTGATTTTGCTGCGATGTTATAACCAGA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TATCCACATATACCCGCAATCATATTCAAGAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AATCACTGCGGGGGTATTTAGCGGAAACGGCT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GATCGAGTAACGTGCGCTGGAACGCGTC
GGCGCGGGGAACACAATTAAAGCCGAGGG	TGGCACCGCGCCTTATTCGGTTTATCCCCGCT
GGCGCGGGGAACACGTTACGTTCGGTAAA	TGGAAAGCGGCGAATATCGGTTTATCCCCGCT
GGCGCGGGGAACACCCAGAAAGTGCCGGT	AGTGCCTGATGAACGACCGGTTTATCCCCGCT
GGCGCGGGGAACACCGCGCCCACTTCCGT	AAAATACAGATAATCCACGGTTTATCCCCGCT
GGCGCGGGGAACACACCGTTCCGGTATGA	TCGAAGATACGGCAAACCGGTTTATCCCCGCT
GGCGCGGAGAACACGGCAGCGGGCGAGGC	AAACACATTCGGGGCGTCGGTTTATCCCCGCT
GGCGCGGGGAACACGGTAATTTCTCATCT	AACAGCCTGTACGCCTCAGGTTTATCCCCGCT
GGCGCGGGGAACACGAATCTAATGCAACA	GATGAATAAACACGTAACGGTTTATCCCCGCT
GGCGCGGGGAACACTCTTTATCGTCAATG	CGAAATTTTCCGCGACGCGGTTTATCCCCGCT
GGCGCGGGGAACACTCCCATTCACCAACA	ACAATATCGCCCTGCAACGGTTTATCCCCGCT
GGCGCGGGGAACACCGTTGCGTCAGGTTG	ATCCAGTGCGTCAGCGGCGGTTTATCCCCGCT
GGCGCGGGGAACACTGATGAAATCGTCAA	TAAAATTATTGGCGCGCCGGTTTATCCCCGCT
GGCGCGGGGAACACACCACCGGAGCCATC	GCCCAACACAGAGCCGCCGGTTTATCCCCGCT
GGCGCGGGGAACACGGCAAACCCGCAAGG	CCCGTATATGGATTTAACGGTTTATCCCCGCT
GGCGCGGGGAACACAACCAATCCAGGCGA	TAAGAGGCGATTAAAGGCGGTTTATCCCCGCT
GGCGCGGGGAACACTCTCGGTCTCGGTCT	CGGTCTCGGTAGTGACGCGGTTTATCCCCGCT
GGCGCGGGGAACACATTTTATTTGACAAA	TTGGCGGCATCTCACTGCGGTTTATCCCCGCT
GGCGCGGGGAACACCACCACACATAATGA	TTACTCCACTACCCAGCCGGTTTATCCCCGCT
GGCGCGGGGAACACACTGCTTATCATTGA	TTTTATTGATTTTTCCCCGGTTTATCCCCGCT
GGCGCGGGGAACAC

>NC_021812|2|2|3484372-3485559|CRT
	TTTTCAGCCCTTGTCGACTGCGGAACGCCCCT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCGAAATAGTGGGGAAAAACCCCTGGTTAACC
CGGTTTATCCCCGCTGGCGCGGGAAACAC	TAGGCCTTGATACCATCGCTCGCACCTCGTCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTTTATTACTGCTTAGTTAATTAATGGGTTGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCTTTTGATTTTGCTGCGATGTTATAACCAGA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TATCCACATATACCCGCAATCATATTCAAGAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AATCACTGCGGGGGTATTTAGCGGAAACGGCT
CGGTTTATCCCCGCTGGCGCGGGGAACACGATCGAGTAACGTGCGCTGGAACGCGTCGGCGCGGGGAACAC	AATTAAAGCCGAGGGTGGCACCGCGCCTTATT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTTACGTTCGGTAAATGGAAAGCGGCGAATAT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CCAGAAAGTGCCGGTAGTGCCTGATGAACGAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGCGCCCACTTCCGTAAAATACAGATAATCCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ACCGTTCCGGTATGATCGAAGATACGGCAAAC
CGGTTTATCCCCGCTGGCGCGGAGAACAC	GGCAGCGGGCGAGGCAAACACATTCGGGGCGT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGTAATTTCTCATCTAACAGCCTGTACGCCTC
AGGTTTATCCCCGCTGGCGCGGGGAACAC	GAATCTAATGCAACAGATGAATAAACACGTAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCTTTATCGTCAATGCGAAATTTTCCGCGACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCCCATTCACCAACAACAATATCGCCCTGCAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGTTGCGTCAGGTTGATCCAGTGCGTCAGCGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGATGAAATCGTCAATAAAATTATTGGCGCGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ACCACCGGAGCCATCGCCCAACACAGAGCCGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGCAAACCCGCAAGGCCCGTATATGGATTTAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AACCAATCCAGGCGATAAGAGGCGATTAAAGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCTCGGTCTCGGTCTCGGTCTCGGTAGTGACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATTTTATTTGACAAATTGGCGGCATCTCACTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CACCACACATAATGATTACTCCACTACCCAGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ACTGCTTATCATTGATTTTATTGATTTTTCCC
CGGTTTATCCCCGCTGGCGCGGGGAACAC

>NC_021812|2|3|3484433-3485559|CRISPRCasFinder
	TTTTCAGCCCTTGTCGACTGCGGAACGCCCCT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCGAAATAGTGGGGAAAAACCCCTGGTTAACC
CGGTTTATCCCCGCTGGCGCGGGAAACAC	TAGGCCTTGATACCATCGCTCGCACCTCGTCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTTTATTACTGCTTAGTTAATTAATGGGTTGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCTTTTGATTTTGCTGCGATGTTATAACCAGA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TATCCACATATACCCGCAATCATATTCAAGAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AATCACTGCGGGGGTATTTAGCGGAAACGGCT
CGGTTTATCCCCGCTGGCGCGGGGAACACGATCGAGTAACGTGCGCTGGAACGCGTCGGCGCGGGGAACACAATTAAAGCCGAGGGTGGCACCGCGCCTTATTCGGTTTATCCCCGCTGGCGCGGGGAACAC	GTTACGTTCGGTAAATGGAAAGCGGCGAATAT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CCAGAAAGTGCCGGTAGTGCCTGATGAACGAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGCGCCCACTTCCGTAAAATACAGATAATCCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ACCGTTCCGGTATGATCGAAGATACGGCAAAC
CGGTTTATCCCCGCTGGCGCGGAGAACAC	GGCAGCGGGCGAGGCAAACACATTCGGGGCGT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGTAATTTCTCATCTAACAGCCTGTACGCCTC
AGGTTTATCCCCGCTGGCGCGGGGAACAC	GAATCTAATGCAACAGATGAATAAACACGTAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCTTTATCGTCAATGCGAAATTTTCCGCGACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCCCATTCACCAACAACAATATCGCCCTGCAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGTTGCGTCAGGTTGATCCAGTGCGTCAGCGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGATGAAATCGTCAATAAAATTATTGGCGCGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ACCACCGGAGCCATCGCCCAACACAGAGCCGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGCAAACCCGCAAGGCCCGTATATGGATTTAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AACCAATCCAGGCGATAAGAGGCGATTAAAGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCTCGGTCTCGGTCTCGGTCTCGGTAGTGACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATTTTATTTGACAAATTGGCGGCATCTCACTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CACCACACATAATGATTACTCCACTACCCAGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ACTGCTTATCATTGATTTTATTGATTTTTCCC
CGGTTTATCCCCGCTGGCGCGGGGAACAC

Protein	Signature genes	Signature genes Name	Protein_function
NC_021812.2\|WP_001173663.1\|3479641_3480247_-\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|179661
NC_021812.2\|WP_000741653.1\|3478036_3478747_-\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
NC_021812.2\|WP_001145540.1\|3494558_3495512_+\|SPI-1-type-III-secretion-system-effector-SopD	unknown	unknown	gnl\|CDD\|185277
NC_021812.2\|WP_000080390.1\|3495724_3496459_-\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NC_021812.2\|WP_001221537.1\|3475769_3476531_-\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732
NC_021812.2\|WP_000144832.1\|3485948_3486869_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NC_021812.2\|WP_001092252.1\|3480233_3481673_-\|sulfate-adenylyltransferase-subunit-CysN	unknown	unknown	gnl\|CDD\|235349
NC_021812.2\|WP_000085106.1\|3487497_3488244_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187776
NC_021812.2\|WP_000490481.1\|3482841_3483888_+\|aminopeptidase	unknown	unknown	gnl\|CDD\|182299
NC_021812.2\|WP_000517480.1\|3478765_3479077_-\|cell-division-protein-FtsB	unknown	unknown	gnl\|CDD\|179156
NC_021812.2\|WP_001118107.1\|3479267_3479624_-\|DUF3561-family-protein	unknown	unknown	gnl\|CDD\|371891
NC_021812.2\|WP_000372384.1\|3481682_3482591_-\|sulfate-adenylyltransferase-subunit-CysD	unknown	unknown	gnl\|CDD\|235375
NC_021812.2\|WP_000029746.1\|3491451_3494115_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NC_021812.2\|WP_000134246.1\|3476511_3477561_-\|tRNA-pseudouridine(13)-synthase-TruD	unknown	unknown	gnl\|CDD\|234884
NC_021812.2\|WP_000368582.1\|3489883_3491440_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
NC_021812.2\|WP_000206416.1\|3488254_3489313_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|273843
NC_021812.2\|WP_000117946.1\|3489326_3489887_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|187862
NC_021812.2\|WP_000281486.1\|3486865_3487516_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|273869
NC_021812.2\|WP_001219244.1\|3477557_3478037_-\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851
NC_021812.2\|WP_001518648.1\|3485655_3485949_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	cd09648_cas2_CAS-I-E	gnl\|CDD\|236930

Protein	Function_ID	Function_description	E-value
NC_021812.2\|WP_001173663.1\|3479641_3480247_-\|adenylyl-sulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	4.61291e-146
NC_021812.2\|WP_000741653.1\|3478036_3478747_-\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	4.09575e-119
NC_021812.2\|WP_001145540.1\|3494558_3495512_+\|SPI-1-type-III-secretion-system-effector-SopD	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0
NC_021812.2\|WP_000080390.1\|3495724_3496459_-\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	8.83466e-139
NC_021812.2\|WP_001221537.1\|3475769_3476531_-\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	7.64916e-147
NC_021812.2\|WP_000144832.1\|3485948_3486869_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	1.21084e-157
NC_021812.2\|WP_001092252.1\|3480233_3481673_-\|sulfate-adenylyltransferase-subunit-CysN	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
NC_021812.2\|WP_000085106.1\|3487497_3488244_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	8.86085e-49
NC_021812.2\|WP_000490481.1\|3482841_3483888_+\|aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
NC_021812.2\|WP_000517480.1\|3478765_3479077_-\|cell-division-protein-FtsB	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	1.08865e-64
NC_021812.2\|WP_001118107.1\|3479267_3479624_-\|DUF3561-family-protein	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	9.09339e-49
NC_021812.2\|WP_000372384.1\|3481682_3482591_-\|sulfate-adenylyltransferase-subunit-CysD	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
NC_021812.2\|WP_000029746.1\|3491451_3494115_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	0
NC_021812.2\|WP_000134246.1\|3476511_3477561_-\|tRNA-pseudouridine(13)-synthase-TruD	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
NC_021812.2\|WP_000368582.1\|3489883_3491440_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	0
NC_021812.2\|WP_000206416.1\|3488254_3489313_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	2.35073e-131
NC_021812.2\|WP_000117946.1\|3489326_3489887_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	8.53741e-34
NC_021812.2\|WP_000281486.1\|3486865_3487516_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|273869	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1974 from Chlorobium tepidum, is found in the Ecoli subtype of CRISPR/Cas regions and is designated Cse3 (CRISPR/Cas Subtype Ecoli protein 3). The representative of this family from Thermus thermophilus HB8 (TTHB192) has been crystallized and found to have a structure consisting of two domains with opposing parallel beta-sheets known as a beta-sheet platform. This structure is similar to those found in the Sex-lethal protein and poly(A)-binding protein. This structure is consistent with an RNA-binding function.	1.11215e-74
NC_021812.2\|WP_001219244.1\|3477557_3478037_-\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	1.27909e-104
NC_021812.2\|WP_001518648.1\|3485655_3485949_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	1.1867e-62

>NC_021812.2|WP_000490481.1|3482841_3483888_+|aminopeptidase
MFSATRRFAVILALGVGFILPAQAASPGPGEIANTQARHIATFFPGRMTGSPAEMLSADYLRQQFTQMGYQSDIRTFNSRFIYTTKDNRKNWHNVTGSTVIAAHEGRVPQQIIIMAHLDTYAPQSDADVDANLGGLTLQGMDDNAAGLGVMLELAARLKDIPTHYGIRFIATSGEEEGKLGAENLLKRMSDAEKKNTLLVINLDNLIVGDKLYFNSGKNTPEAVRTLTRDRALAIARRYGIAANTNPGRNPSYPKGTGCCNDAEVFDKAGISVLSVEATNWNLGKKDGYQQRVKNASFPNGNSWHDVRLDNQQHIDKALPGRIERRSRDVVRIMLPLVKELAKAEKTS
>NC_021812.2|WP_000372384.1|3481682_3482591_-|sulfate-adenylyltransferase-subunit-CysD
MDQKRLTHLRQLEAESIHIIREVAAEFANPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYAFRDRTANAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWRNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMVDDDRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESHAQTLPEIIEEMLVSTTSERQGRMIDRDQAGSMELKKRQGYF
>NC_021812.2|WP_001092252.1|3480233_3481673_-|sulfate-adenylyltransferase-subunit-CysN
MNTILAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTLQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYREETFARIREDYLTFAEQLPGDLDIRFVPLSALEGDNVAAQSANMRWYSGPTLLEVLETVDIQRAVDRQPMRFPVQYVNRPNLDFRGYAGTLASGSVKVGERIKVLPSGVESSVARIVTFDGDKEEACAGEAITLVLNDDIDISRGDLLLAANETLAPARHAAIDVVWMAEQPLAPGQSYDVKLAGKKTRARIEAICYQIDINNLTQRDVESLPLNGIGLVEMTFDEPLALDIYQQNPVTGGLIFIDRLSNVTVGAGMVRELDERGATPSVEYSAFELELNALVRRHFPHWDARDLLGDKHGAA
>NC_021812.2|WP_001173663.1|3479641_3480247_-|adenylyl-sulfate-kinase
MALHDENVVWHSHPVTVAAREQLHGHRGVVLWFTGLSGSGKSTVAGALEEALHQRGVSTYLLDGDNVRHGLCRDLGFSDADRQENIRRVGEVASLMADAGLIVLTAFISPHRAERQLVKERVGHDRFIEIYVNTPLAICEQRDPKGLYKKARAGELRNFTGIDAIYEAPDSPQVHLNGEQLVTNLVSQLLDLLRRRDIIRS
>NC_021812.2|WP_001118107.1|3479267_3479624_-|DUF3561-family-protein
MPGMVKVTGFNMRNSHNITFTRSDAFMVDDDATCAFPGAVVGFVSWLLALGIPFLLYGPNTLFFFLYTWPFFLALMPVSVIIGIALHLLVKGKILFSIMFTLLAVGALFGALFIWLLG
>NC_021812.2|WP_000517480.1|3478765_3479077_-|cell-division-protein-FtsB
MGKLTLLLLALLVWLQYSLWFGKNGIHDYSRVNDDVVAQQATNAKLKARNDQLFAEIDDLNGGQEAIEERARNELSMTKPGETFYRLVPDASKRAATAGQTHR
>NC_021812.2|WP_000741653.1|3478036_3478747_-|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MAATLLDVCAVVPAAGFGRRMQTECPKQYLSIGNKTILEHSVHALLAHPRVTRVVIAISPGDHRFAQLPLANHPQITVVDGGNERADSVLAGLQAVAKAQWVLVHDAARPCLHQDDLARLLTISENSRVGGILASPVRDTMKRGEPGKNAIAHTVERADLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPALVEGRADNIKVTRPEDLALAEFYLTRTIHQEKA
>NC_021812.2|WP_001219244.1|3477557_3478037_-|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLMKAAK
>NC_021812.2|WP_000134246.1|3476511_3477561_-|tRNA-pseudouridine(13)-synthase-TruD
MTEFDNLTWLHGKPQGSGLLKANPEDFVVVEDLGFTPDGEGEHILLRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDFSAFQLEGCKVLEYARHKRKLRLGALKGNAFTLVLREISDRRDVETRLQAIRDGGVPNYFGAQRFGIGGSNLQGALRWAQSNAPVRDRNKRSFWLSAARSALFNQIVHQRLKKPDFNQVVDGDALQLAGRGSWFVATSEELPELQRRVDEKELMITASLPGSGEWGTQRAALAFEQDAIAQETVLQSLLLREKVEASRRAMLLYPQQLSWNWWDDVTVELRFWLPAGSFATSVVRELINTMGDYAHIAE
>NC_021812.2|WP_001221537.1|3475769_3476531_-|5'/3'-nucleotidase-SurE
MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFDNGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLNGYQHYDTAAAVTCALLRGLSREPLRTGRILNVNVPDLPLAQIKGIRVTRCGSRHPADKVIPQEDPRGNTLYWIGPPGDKYDAGPDTDFAAVDEGYVSVTPLHVDLTAHSAHDVVSDWLDSVGVGTQW
>NC_021812.2|WP_001518648.1|3485655_3485949_-|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MSMVVVVTENVPPRLRGRLAVWLLEVRAGVYVGDTSKRIREMIWQQITQLGGVGNVVMAWATNTESGFEFQTWGENRRIPVDLDGLRLVSFLPVENQ
>NC_021812.2|WP_000144832.1|3485948_3486869_-|type-I-E-CRISPR-associated-endonuclease-Cas1
MTFVPLNPIPLKDRTSMIFLQYGQIDVLDGAFVLIDKTGIRTHIPVGSVACIMLEPGTRVSHAAVRLASTVGTLLVWVGEAGVRVYSSGQPGGARADKLLYQAKLALDDDLRLKVVRKMYELRFREPPPARRSVEQLRGIEGSRVRATYALLAKQYGVKWHGRNYDPKDWEKGDVVNRCISAATSCLYGISEAAILAAGYAPAIGFIHSGKPLSFVYDIADIIKFESVVPKAFEIAARHPAEPDKEVRLACRDIFRSSKLTGKLIPLIEEVLAAGEIEPPQPAPDMLPPAIPEPESLGDSGHRGHG
>NC_021812.2|WP_000281486.1|3486865_3487516_-|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSRITLHTSELSPAQLLHLVERGEYVMHQWLWDLFPGSKERQFLYRREELQGAFRFFVLSQEQPAASAIFDVQTRPFAPTLSAGQTLRFNLRANPTVCKNGKRHDLLMEAKRQRKTQGDSQDIWSYQQQAALTWLARQGEQNGFTLREASVDAYRQQQIRRGKDRQMIQFSSVDYTGVLVINEPALFLQRLAQGFGKSRAFGCGMMMIKPGDDA
>NC_021812.2|WP_000085106.1|3487497_3488244_-|type-I-E-CRISPR-associated-protein-Cas5/CasD
MSQYLVFQLHGPMASWGVDAPGEVRHSHDLPSRSALLGLLAAALGIRRDEEERLNAFNRHYQFLLCSSGNPRWARDYHTVQMPKEVRKARYFSRREELQDPELLSALISRRDYYTDAWWMIAVSATPDAPYSLAQLQASLQHPVFPLYLGRKSHPLALPLAPQLLDGRAPDVLREAYRWYQDQFNTLKLTLPGLQNECWWEGEHDGLTANKILRRRDMPLSRQQWLFGERSVNQGPWLRKEDACISQE
>NC_021812.2|WP_000206416.1|3488254_3489313_-|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTTFIQLHLLTAYPAANLNRDDTGAPKTVVLGGATRLRISSQSLKRAWRTSELFEQALAGHIGIRTGRIAREAAQILVDSGIDAKKAVEYVKNIANCFGKVKEDKKPKDELTNAETEQLVHISPAEFEAVKALARRLAEEKRPATEEEAELLRHDRMAVDIAMFGRMLAKKTDFNVEAACQVAHAFGVSETIIEDDFFTAVDDLRQASAEDAGAGHLGETGFGSALFYTYICIDKDLLVKNLNDNEELANKTLRAFTEAALKVSPTGKQNSFASRAYASWALAEKGTDQPRSLAAAFYEPINGTDQLNVAVKRITSLHKNMNKVYGQRTDTASFDVMNQQGSMKDVLDFICA
>NC_021812.2|WP_000117946.1|3489326_3489887_-|type-I-E-CRISPR-associated-protein-Cse2/CasB
MSVVTKDDKATLRQWHEELQEKRGLRASLRRSKTVNDACLAEGLHSLLMQTHSLWKNKAPWNVTALAITAALAAHIKFIDEQKSFAAQLGQKKGGDTPVMSKLRFSHLLAVKTPDELLRQLRRAVKLLDGSVNLFSLADDIFCWCQEQNDLLNHHRRQQRPTEFLRIRWALEYYQAGDGDTDNEQD
>NC_021812.2|WP_000368582.1|3489883_3491440_-|type-I-E-CRISPR-associated-protein-Cse1/CasA
MDNFSLLTTPWLPVRFKDGSTGKLAPVDLADENVVDIAATRADLQGAAWQFLLGLLQCSIAPKRYKNWEDIWFDGLHADVLHKALAPLEHAFQFGAESPSFMQDFEPLSGEKVSIASLLPEIPGAQTTKFNKDHFVKRGVTERFCPHCAALALFSLQLNAPAGGKGYRTGLRGGGPLTTLVELQEYQGERQTPLWRKLWLNVMPQDTADLPLPDQCDATVFPWLAATRTSEQANAVTTPEQVNKLQAYWGMPRRIRLDFATLQSGCCDICGAESDELLGFMTVKNYGVNYDGWRHPLTPYRAPVKDQNAFFSVKPQPGGLIWRDWLGLSQNNQTEANYESPAQVVKVFNARSLTDVKAGIWGFGADFDNMKIRCWYEHHFPLLMTEGLIPDLRKAVQTAARLLSLLRSALKEAWFANAKDARGDFSFIDIDFWNLTQGRFLNLIHDLENGHKPDERLNKWQRELWLFTRHYFDDHVFTNPYESSDLERIMTARKKYFTTSAEKQSAKAAKAKKQEAAE
>NC_021812.2|WP_000029746.1|3491451_3494115_-|CRISPR-associated-helicase/endonuclease-Cas3
MSIYHYWGKSRRGETNGGDDYHLLCWHSLDVAAVGYWMVINNIYFIDHYLKKLGIQDKEQAAQFFAWILCWHDIGKFAHSFQQLYRHEALNIFNEPTRHYEKIAHTTLGYMLWNSWLSECPELFPPSSLSARKSKRVMALWMPVTTGHHGRPPEAIQELDHFRQQDKDAARDFLLRIKALFPLITLPEAWDEDEGIDQFQQLSWFISAAVVLADWTGSASRYFPRTAEKMPVDTYWQQALAKAQTAITLFPSAANVSAFTGIETLFPFIQHPTPLQQKALELDINVDGAQLFILEDVTGAGKTEAALILAHRLMAAGKAQGLYFGLPTMATANAMFERMANTWLALYQPDSRPSLILAHSARRLMDRFNQSIWSVTLSGTEEPDEAQPYSQGCAAWFADSNKKALLAEVGVGTLDQAMMAVMPFKHNNLRLLGLSNKILLADEIHACDAWMSRILEGLIERQASNGNATILLSATLSQQQRDKLVAAFSRGVRRSVQAPLLGHDDYPWLTQVTQTELISQRVDTRKEVERSVDIGWLHSEEACLERIGEAVEKGNCIAWIRNSVDDAIRIYRQLQLSKVVATENLLLFHSRFAFHDRQRIESQTLNLFGKQSGAQRAGKVIIATQVIEQSLDIDCDEMISDLAPVDLLIQRAGRLQRHIRDRNGLVKKSGQDERETPVLRILAPEWDDAPRENWLSSAMRNSAYVYPDHGRMWLTQRILREQGTIRMPQSARLLIESVYGEDVNMPVGFAKTEQLQEGKFYCDRAFAGQMLLNFAPGYCAEISDSLPEKMSTRLAEESVTLWLAKIVDSVVTPYASGEHAWEMSVLRVRQSWWNKHKDEFEKLDGEPLRKWCAQQHQDKDFATVIVVTDFAACGYSANEGLIGMMGE
>NC_021812.2|WP_001145540.1|3494558_3495512_+|SPI-1-type-III-secretion-system-effector-SopD
MPVTLSFGNHQNYTLNESRLAHLLSADKEKAIHMGGWDKVQDHFRAEKKDHALEVLHSIIHGQGRGEPGEMEVNVEDINKIYAFKRLQHLACPAHQDLFTIKMDASQTQFLLMVGDTVISQSNIKDILNISDDAVIESMSREERQLFLQICEVIGAKMTWHPELLQESISTLRKEVTGNAQIKAAVYEMMRPAEAPDHPLVEWQDLLTADEKSMLACINAGNFEPTTQFCKIGYQEVQGEVAFSMMHPCISYLLHSYSPFAEFKPTNSGFLKKLNQDYNDYHAKKMFIDVILEKLYLTHERSLHIGKDGCSRNILLV
>NC_021812.2|WP_000080390.1|3495724_3496459_-|phosphoadenosine-phosphosulfate-reductase
MSQLDLNALNELPKVDRVLALAETNAQLETLTAEERVAWALENLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNEINKVEPMNRALKELKAQTWFAGLRREQSGSRAHLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG

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Crispr_ID: NC_021812_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_021812_3

3501817-3502943

TypeI-E

I-E

Consensus_repeat	Method
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRISPRCasFinder
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	PILER-CR

18 spacers

cas3,cas8e,cse2gr11,cas7

The CRISPR arrays of NC_021812_3

>merge|NC_021812|3|3501817-3502943|CRISPRCasFinder,CRT,PILER-CR
ACGGCTATCCTTGTTGGCGCGGGGAACACATCTTCATATTGCGTGACGCTGCCGATGAACGCGGTTTATCCCCGCTGGCGCGGGGAACACTCTTTATCAGCTAACCATTTCCAGAACTCGTCCGGTTTATCCCTGCTGGCGCGGGGAACACTATAATATGAATTAATTTTTGCGCATAACCTGCGGTTTATCCCCGCTGGCGCGGGGAACACTGCCCGTTCTGCCTCTTCGCACTCTCGATCAACGGTTTATCCCCGCTGGCGCGGGGAACACGTCGCGTTCGTTGCCGGTATAGACCAGCGTCACGGTTTATCCCCGCTGGCGCGGGGAACACATCGAATCGAAACCCCAGCCACAGAAATAATTCGGTTTATCCCCGCTGGCGCGGGGAACACGCTCATGTCAAACGCCATCAGCGTTCCGGCATCGGTTTATCCCCGCTAGCGCGGGGAACACAATCGCCAGCCTCGGAAATATTCCATCCTCCGCGGTTTATCCCCGCTGGCGCGGGGAACACAGGAACTAAACAGCCTGACCGTTGAGGATCTGCGGTTTATCCCCGCTGGCGCGGGGAACACACCGGACAAATCTTTTTTTTCCTGTTCCTGTTCGGTTTATCCCCGCTGGCGCGGGGAACACGGGCGGTCCCCGGCCTCAATACCGCGCTGACGCGGTTTATCCCCGCTGGCGCGGGGAACACTTGAGGTGCCGCTTGCCGTTCTTCTGTTTTTTCGGTTTATCCCCGCTGGCGCGGGGAACACGGGCACTATGAACGGATCGGCGCTGATGCCGGCGGTTTATCCCCGCTGGCGCGGGGAACACGGTAAAGCCACACCATTTTTTATTGACCTCGCCGGTTTATCCCCGCTGGCGCGGGGAACACCTAGGAGGCGTAATGAATACTACGTATCAAAACGGTTTATCCCCGCTGGCGCGGGGAACACGTGGTGGCCTCAAATAAATTCGAGCGCTGGAGCGGTTTATCCCCGCTGGCGCGGGGAACACTCGACGTGGACGAGGAGTTACTCAACCGCTGCCGGTTTATCCCCGCTGGCGCGGGGAACACTAATGGCCACAGTAAGTCAAACGGTTCTGGAACGGTTTATCCCCGCTGGCGCGGGGAACAC

>NC_021812|3|4|3501817-3502943|CRISPRCasFinder
ACGGCTATCCTTGTTGGCGCGGGGAACAC	ATCTTCATATTGCGTGACGCTGCCGATGAACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCTTTATCAGCTAACCATTTCCAGAACTCGTC
CGGTTTATCCCTGCTGGCGCGGGGAACAC	TATAATATGAATTAATTTTTGCGCATAACCTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGCCCGTTCTGCCTCTTCGCACTCTCGATCAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTCGCGTTCGTTGCCGGTATAGACCAGCGTCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATCGAATCGAAACCCCAGCCACAGAAATAATT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCTCATGTCAAACGCCATCAGCGTTCCGGCAT
CGGTTTATCCCCGCTAGCGCGGGGAACAC	AATCGCCAGCCTCGGAAATATTCCATCCTCCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGGAACTAAACAGCCTGACCGTTGAGGATCTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ACCGGACAAATCTTTTTTTTCCTGTTCCTGTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGGCGGTCCCCGGCCTCAATACCGCGCTGACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTGAGGTGCCGCTTGCCGTTCTTCTGTTTTTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGGCACTATGAACGGATCGGCGCTGATGCCGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGTAAAGCCACACCATTTTTTATTGACCTCGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CTAGGAGGCGTAATGAATACTACGTATCAAAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTGGTGGCCTCAAATAAATTCGAGCGCTGGAG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCGACGTGGACGAGGAGTTACTCAACCGCTGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TAATGGCCACAGTAAGTCAAACGGTTCTGGAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC

>NC_021812|3|3|3501817-3502943|CRT
ACGGCTATCCTTGTTGGCGCGGGGAACAC	ATCTTCATATTGCGTGACGCTGCCGATGAACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCTTTATCAGCTAACCATTTCCAGAACTCGTC
CGGTTTATCCCTGCTGGCGCGGGGAACAC	TATAATATGAATTAATTTTTGCGCATAACCTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGCCCGTTCTGCCTCTTCGCACTCTCGATCAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTCGCGTTCGTTGCCGGTATAGACCAGCGTCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATCGAATCGAAACCCCAGCCACAGAAATAATT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCTCATGTCAAACGCCATCAGCGTTCCGGCAT
CGGTTTATCCCCGCTAGCGCGGGGAACAC	AATCGCCAGCCTCGGAAATATTCCATCCTCCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGGAACTAAACAGCCTGACCGTTGAGGATCTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ACCGGACAAATCTTTTTTTTCCTGTTCCTGTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGGCGGTCCCCGGCCTCAATACCGCGCTGACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTGAGGTGCCGCTTGCCGTTCTTCTGTTTTTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGGCACTATGAACGGATCGGCGCTGATGCCGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGTAAAGCCACACCATTTTTTATTGACCTCGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CTAGGAGGCGTAATGAATACTACGTATCAAAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTGGTGGCCTCAAATAAATTCGAGCGCTGGAG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCGACGTGGACGAGGAGTTACTCAACCGCTGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TAATGGCCACAGTAAGTCAAACGGTTCTGGAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC

>NC_021812|3|2|3501878-3502943|PILER-CR
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCTTTATCAGCTAACCATTTCCAGAACTCGTC
CGGTTTATCCCTGCTGGCGCGGGGAACAC	TATAATATGAATTAATTTTTGCGCATAACCTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGCCCGTTCTGCCTCTTCGCACTCTCGATCAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTCGCGTTCGTTGCCGGTATAGACCAGCGTCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATCGAATCGAAACCCCAGCCACAGAAATAATT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCTCATGTCAAACGCCATCAGCGTTCCGGCAT
CGGTTTATCCCCGCTAGCGCGGGGAACAC	AATCGCCAGCCTCGGAAATATTCCATCCTCCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGGAACTAAACAGCCTGACCGTTGAGGATCTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ACCGGACAAATCTTTTTTTTCCTGTTCCTGTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGGCGGTCCCCGGCCTCAATACCGCGCTGACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTGAGGTGCCGCTTGCCGTTCTTCTGTTTTTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGGCACTATGAACGGATCGGCGCTGATGCCGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGTAAAGCCACACCATTTTTTATTGACCTCGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CTAGGAGGCGTAATGAATACTACGTATCAAAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTGGTGGCCTCAAATAAATTCGAGCGCTGGAG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCGACGTGGACGAGGAGTTACTCAACCGCTGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TAATGGCCACAGTAAGTCAAACGGTTCTGGAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC

Protein	Signature genes	Signature genes Name	Protein_function
NC_021812.2\|WP_001290663.1\|3496534_3498247_-\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	unknown	unknown	gnl\|CDD\|237402
NC_021812.2\|WP_001199961.1\|3503239_3503911_-\|7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|275126
NC_021812.2\|WP_000210863.1\|3505427_3507065_-\|CTP-synthase-(glutamine-hydrolyzing)	unknown	unknown	gnl\|CDD\|235437
NC_021812.2\|WP_001145540.1\|3494558_3495512_+\|SPI-1-type-III-secretion-system-effector-SopD	unknown	unknown	gnl\|CDD\|185277
NC_021812.2\|WP_000080390.1\|3495724_3496459_-\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NC_021812.2\|WP_001208011.1\|3500921_3501719_-\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|224158
NC_021812.2\|WP_001079648.1\|3513857_3514394_+\|fimbrial-protein	unknown	unknown	gnl\|CDD\|185168
NC_021812.2\|WP_000210911.1\|3498246_3500046_-\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	unknown	unknown	gnl\|CDD\|182862
NC_021812.2\|WP_001044459.1\|3512076_3512850_+\|fimbria/pilus-periplasmic-chaperone	unknown	unknown	gnl\|CDD\|185177
NC_021812.2\|WP_000981789.1\|3509364_3512064_+\|fimbrial-biogenesis-outer-membrane-usher-protein	unknown	unknown	gnl\|CDD\|185176
NC_021812.2\|WP_000832395.1\|3513390_3513861_+\|fimbrial-protein	unknown	unknown	gnl\|CDD\|185179
NC_021812.2\|WP_000178265.1\|3512869_3513376_+\|fimbrial-protein	unknown	unknown	gnl\|CDD\|185178
NC_021812.2\|WP_000117946.1\|3489326_3489887_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|187862
NC_021812.2\|WP_000029746.1\|3491451_3494115_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NC_021812.2\|WP_000206416.1\|3488254_3489313_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|273843
NC_021812.2\|WP_000368582.1\|3489883_3491440_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
NC_021812.2\|WP_000210451.1\|3507292_3508093_-\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
NC_021812.2\|WP_000842512.1\|3508697_3509285_+\|fimbrial-protein	unknown	unknown	gnl\|CDD\|185169
NC_021812.2\|WP_000036734.1\|3504046_3505345_-\|phosphopyruvate-hydratase	unknown	unknown	gnl\|CDD\|234617
NC_021812.2\|WP_000108313.1\|3500469_3500832_+\|6-carboxytetrahydropterin-synthase-QueD	unknown	unknown	gnl\|CDD\|238264

Protein	Function_ID	Function_description	E-value
NC_021812.2\|WP_001290663.1\|3496534_3498247_-\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0
NC_021812.2\|WP_001199961.1\|3503239_3503911_-\|7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	1.43874e-155
NC_021812.2\|WP_000210863.1\|3505427_3507065_-\|CTP-synthase-(glutamine-hydrolyzing)	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
NC_021812.2\|WP_001145540.1\|3494558_3495512_+\|SPI-1-type-III-secretion-system-effector-SopD	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0
NC_021812.2\|WP_000080390.1\|3495724_3496459_-\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	8.83466e-139
NC_021812.2\|WP_001208011.1\|3500921_3501719_-\|MBL-fold-metallo-hydrolase	gnl\|CDD\|224158	COG1237, COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only].	1.12831e-101
NC_021812.2\|WP_001079648.1\|3513857_3514394_+\|fimbrial-protein	gnl\|CDD\|185168	PRK15260, PRK15260, fimbrial protein SteF; Provisional.	3.25472e-123
NC_021812.2\|WP_000210911.1\|3498246_3500046_-\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	gnl\|CDD\|182862	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit.	0
NC_021812.2\|WP_001044459.1\|3512076_3512850_+\|fimbria/pilus-periplasmic-chaperone	gnl\|CDD\|185177	PRK15274, PRK15274, putative periplasmic fimbrial chaperone protein SteC; Provisional.	0
NC_021812.2\|WP_000981789.1\|3509364_3512064_+\|fimbrial-biogenesis-outer-membrane-usher-protein	gnl\|CDD\|185176	PRK15273, PRK15273, fimbrial biogenesis outer membrane usher protein.	0
NC_021812.2\|WP_000832395.1\|3513390_3513861_+\|fimbrial-protein	gnl\|CDD\|185179	PRK15276, PRK15276, putative fimbrial subunit SteE; Provisional.	1.31755e-98
NC_021812.2\|WP_000178265.1\|3512869_3513376_+\|fimbrial-protein	gnl\|CDD\|185178	PRK15275, PRK15275, putative fimbrial protein SteD; Provisional.	9.51628e-105
NC_021812.2\|WP_000117946.1\|3489326_3489887_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	8.53741e-34
NC_021812.2\|WP_000029746.1\|3491451_3494115_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	0
NC_021812.2\|WP_000206416.1\|3488254_3489313_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	2.35073e-131
NC_021812.2\|WP_000368582.1\|3489883_3491440_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	0
NC_021812.2\|WP_000210451.1\|3507292_3508093_-\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	3.42454e-158
NC_021812.2\|WP_000842512.1\|3508697_3509285_+\|fimbrial-protein	gnl\|CDD\|185169	PRK15261, PRK15261, fimbrial protein SteA; Provisional.	5.36845e-100
NC_021812.2\|WP_000036734.1\|3504046_3505345_-\|phosphopyruvate-hydratase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
NC_021812.2\|WP_000108313.1\|3500469_3500832_+\|6-carboxytetrahydropterin-synthase-QueD	gnl\|CDD\|238264	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS). Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids, as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after uptake by a carrier-mediated active transport system. Most microbes and plants lack this system and must synthesize folates de novo from guanosine triphosphate. One enzyme from this pathway is PTPS which catalyzes the conversion of dihydroneopterin triphosphate to 6-pyruvoyl tetrahydropterin. The functional enzyme is a hexamer of identical subunits.	2.78454e-58

>NC_021812.2|WP_001208011.1|3500921_3501719_-|MBL-fold-metallo-hydrolase
MALRIRVLLENHKGAGADKSLKVRPGLSLLVEDESTSILFDTGPDGSFMQNALAMGIDLSDVSAVVLSHGHYDHCGGVPWLPDNSRIICHPDIARERYAAMTFLGITRKIKKLSCEVDYSRYRMMYTRDPLPIGENFIWSGEIPVVAPEAYGIFGGHDAEPDSILDEGVLIYQSTKGLVIITGCGHRGIANIVRHCQNITGIKRIYALVGGFHLRCASPFTLWRVRRFLQEHKPEKLCGCHCTGAWGRLWLPEITAPATGDVLRF
>NC_021812.2|WP_000108313.1|3500469_3500832_+|6-carboxytetrahydropterin-synthase-QueD
MSTTLYKDFTFEAAHRLPHVPEGHKCGRLHGHSFMVRLEITGEVDPHTGWIMDFADLKAAFKPTYDRLDHYYLNDIPGLSNPTSEVLAKWIWDQVKPVVPLLSAVMVKETCTAGCVYRGE
>NC_021812.2|WP_000210911.1|3498246_3500046_-|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit
MTTPAPLTGLLPLNPEQLARLQAATTDLTPEQLAWVSGYFWGVLNPRSGAVAVTPAPEGKMPGVTLISASQTGNARRVAEALRDDLLAANLNVTLVNAGDYKFKQIASEKLLVIVTSTQGEGEPPEEAVALHKFLFSKKAPKLENTAFAVFSLGDTSYEFFCQSGKDFDSKLAELGGERLLDRVDADVEYQAAASEWRARVVDVLKSRAPVAAPSQSVATGAVNDIHTSPYTKDAPLTATLSVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKELVELLWLKGDEPVTVDGKTLPLAEALEWHFELTVNTANIVENYATLTRSESLLPLVGDKAQLQHYAATTPIVDMVRFSPAQLDAQALIDLLRPLTPRLYSIASAQAEVESEVHITVGVVRYDIEGRARAGGASSFLADRVEEEGEVRVFIEHNDNFRLPANPQTPVIMIGPGTGIAPFRAFMQQRAVEGAEGKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLSRIDLAWSRDQKEKIYVQDKLREQGAELWRWINDGAHIYVCGDARRMAADVEKALLEVIAEFGGMDLESADEYLSELRVERRYQRDVY
>NC_021812.2|WP_001290663.1|3496534_3498247_-|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit
MSEKHPGPLVVEGKLSDAERMKLESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAAQKLEPRHAMLLRCRLPGGVITTTQWQAIDKFAADNTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGLETFKAEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDNNWHLTLFIENGRILDYPGRPLKTGLLEIAKIHQGEFRITANQNLIIASVPESQKAKIETLARDHGLMNAVSAQRENSMACVSFPTCPLAMAEAERFLPSFTDKVEAILEKHGIPDEHIVMRVTGCPNGCGRAMLAEIGLVGKAPGRYNLHLGGNRIGTRIPRMYKENITEPDILASLGELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDFWE
>NC_021812.2|WP_000080390.1|3495724_3496459_-|phosphoadenosine-phosphosulfate-reductase
MSQLDLNALNELPKVDRVLALAETNAQLETLTAEERVAWALENLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNEINKVEPMNRALKELKAQTWFAGLRREQSGSRAHLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>NC_021812.2|WP_001145540.1|3494558_3495512_+|SPI-1-type-III-secretion-system-effector-SopD
MPVTLSFGNHQNYTLNESRLAHLLSADKEKAIHMGGWDKVQDHFRAEKKDHALEVLHSIIHGQGRGEPGEMEVNVEDINKIYAFKRLQHLACPAHQDLFTIKMDASQTQFLLMVGDTVISQSNIKDILNISDDAVIESMSREERQLFLQICEVIGAKMTWHPELLQESISTLRKEVTGNAQIKAAVYEMMRPAEAPDHPLVEWQDLLTADEKSMLACINAGNFEPTTQFCKIGYQEVQGEVAFSMMHPCISYLLHSYSPFAEFKPTNSGFLKKLNQDYNDYHAKKMFIDVILEKLYLTHERSLHIGKDGCSRNILLV
>NC_021812.2|WP_000029746.1|3491451_3494115_-|CRISPR-associated-helicase/endonuclease-Cas3
MSIYHYWGKSRRGETNGGDDYHLLCWHSLDVAAVGYWMVINNIYFIDHYLKKLGIQDKEQAAQFFAWILCWHDIGKFAHSFQQLYRHEALNIFNEPTRHYEKIAHTTLGYMLWNSWLSECPELFPPSSLSARKSKRVMALWMPVTTGHHGRPPEAIQELDHFRQQDKDAARDFLLRIKALFPLITLPEAWDEDEGIDQFQQLSWFISAAVVLADWTGSASRYFPRTAEKMPVDTYWQQALAKAQTAITLFPSAANVSAFTGIETLFPFIQHPTPLQQKALELDINVDGAQLFILEDVTGAGKTEAALILAHRLMAAGKAQGLYFGLPTMATANAMFERMANTWLALYQPDSRPSLILAHSARRLMDRFNQSIWSVTLSGTEEPDEAQPYSQGCAAWFADSNKKALLAEVGVGTLDQAMMAVMPFKHNNLRLLGLSNKILLADEIHACDAWMSRILEGLIERQASNGNATILLSATLSQQQRDKLVAAFSRGVRRSVQAPLLGHDDYPWLTQVTQTELISQRVDTRKEVERSVDIGWLHSEEACLERIGEAVEKGNCIAWIRNSVDDAIRIYRQLQLSKVVATENLLLFHSRFAFHDRQRIESQTLNLFGKQSGAQRAGKVIIATQVIEQSLDIDCDEMISDLAPVDLLIQRAGRLQRHIRDRNGLVKKSGQDERETPVLRILAPEWDDAPRENWLSSAMRNSAYVYPDHGRMWLTQRILREQGTIRMPQSARLLIESVYGEDVNMPVGFAKTEQLQEGKFYCDRAFAGQMLLNFAPGYCAEISDSLPEKMSTRLAEESVTLWLAKIVDSVVTPYASGEHAWEMSVLRVRQSWWNKHKDEFEKLDGEPLRKWCAQQHQDKDFATVIVVTDFAACGYSANEGLIGMMGE
>NC_021812.2|WP_000368582.1|3489883_3491440_-|type-I-E-CRISPR-associated-protein-Cse1/CasA
MDNFSLLTTPWLPVRFKDGSTGKLAPVDLADENVVDIAATRADLQGAAWQFLLGLLQCSIAPKRYKNWEDIWFDGLHADVLHKALAPLEHAFQFGAESPSFMQDFEPLSGEKVSIASLLPEIPGAQTTKFNKDHFVKRGVTERFCPHCAALALFSLQLNAPAGGKGYRTGLRGGGPLTTLVELQEYQGERQTPLWRKLWLNVMPQDTADLPLPDQCDATVFPWLAATRTSEQANAVTTPEQVNKLQAYWGMPRRIRLDFATLQSGCCDICGAESDELLGFMTVKNYGVNYDGWRHPLTPYRAPVKDQNAFFSVKPQPGGLIWRDWLGLSQNNQTEANYESPAQVVKVFNARSLTDVKAGIWGFGADFDNMKIRCWYEHHFPLLMTEGLIPDLRKAVQTAARLLSLLRSALKEAWFANAKDARGDFSFIDIDFWNLTQGRFLNLIHDLENGHKPDERLNKWQRELWLFTRHYFDDHVFTNPYESSDLERIMTARKKYFTTSAEKQSAKAAKAKKQEAAE
>NC_021812.2|WP_000117946.1|3489326_3489887_-|type-I-E-CRISPR-associated-protein-Cse2/CasB
MSVVTKDDKATLRQWHEELQEKRGLRASLRRSKTVNDACLAEGLHSLLMQTHSLWKNKAPWNVTALAITAALAAHIKFIDEQKSFAAQLGQKKGGDTPVMSKLRFSHLLAVKTPDELLRQLRRAVKLLDGSVNLFSLADDIFCWCQEQNDLLNHHRRQQRPTEFLRIRWALEYYQAGDGDTDNEQD
>NC_021812.2|WP_000206416.1|3488254_3489313_-|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTTFIQLHLLTAYPAANLNRDDTGAPKTVVLGGATRLRISSQSLKRAWRTSELFEQALAGHIGIRTGRIAREAAQILVDSGIDAKKAVEYVKNIANCFGKVKEDKKPKDELTNAETEQLVHISPAEFEAVKALARRLAEEKRPATEEEAELLRHDRMAVDIAMFGRMLAKKTDFNVEAACQVAHAFGVSETIIEDDFFTAVDDLRQASAEDAGAGHLGETGFGSALFYTYICIDKDLLVKNLNDNEELANKTLRAFTEAALKVSPTGKQNSFASRAYASWALAEKGTDQPRSLAAAFYEPINGTDQLNVAVKRITSLHKNMNKVYGQRTDTASFDVMNQQGSMKDVLDFICA
>NC_021812.2|WP_001199961.1|3503239_3503911_-|7-carboxy-7-deazaguanine-synthase-QueE
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWDKLSDREVSLFSILAKTKESDKWGAASSEDLLAVINRQGYTARHVVITGGEPCIHDLMPLTDLLEKSGFSCQIETSGTHEVRCTPNTWVTVSPKVNMRGGYDVLSQALERANEIKHPVGRVRDIEALDELLATLSDDKPRVIALQPISQKEDATRLCIETCIARNWRLSMQTHKYLNIA
>NC_021812.2|WP_000036734.1|3504046_3505345_-|phosphopyruvate-hydratase
MSKIVKVIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVGAVNGPIAQAILGKDAKDQAGIDKIMIDLDGTENKSNFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKGKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>NC_021812.2|WP_000210863.1|3505427_3507065_-|CTP-synthase-(glutamine-hydrolyzing)
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQLAVDIGREHALFMHLTLVPYLAAAGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISMKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIYEEANPAGEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVTVNIKLIDSQDVETRGVEILKDLDAILIPGGFGYRGVEGKIATARYARENNIPYLGICLGMQVALIEFARNVAGMDNANSTEFVPDCKYPVVALITEWRDEDGNVEVRSEKSDLGGTMRLGAQQCQLSDDSLVRQLYGASTIVERHRHRYEVNNMLLKQIEAAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAANEHQKRQAK
>NC_021812.2|WP_000210451.1|3507292_3508093_-|nucleoside-triphosphate-pyrophosphohydrolase
MTTNHQIDRLLTLMQRLRDPENGCPWDKEQTFASIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFGELSADNSEEALVRWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCSNVGFDWTTLGPVVDKVYEEIDEVMFEARQAVVDQAKLEEEMGDLLFATVNMARHLGTKAELALQKANDKFERRFREVERIVAARGLEMTGVDLETMEEVWQEVKRQEIDL
>NC_021812.2|WP_000842512.1|3508697_3509285_+|fimbrial-protein
MKSSHFCKLAVTASLVMGIVSGAQAAGSNTAKVTFLGNIVDSPCSVTLDTEDQTVNMGSSIGNGTLSNGKTTINNARTFHIDLEGCTWATEKNMNVVFTTGSGTTAATGATDNLALMKTDGTGAISNVSLAIGDAGKNNIKLGDTYTQAIADLDGDTILDEKQSLNFTAWLVGAATGTVGTGEFSSAANVTISYL
>NC_021812.2|WP_000981789.1|3509364_3512064_+|fimbrial-biogenesis-outer-membrane-usher-protein
MMNNTWKSVLCPIACGVGMLLSASPYSASGKDIEFNTDFLDVKNRDNVNIAQFSRKGFILPGVYLLQIKINGQTLPQEFPVNWVIPEHDPQGSEVCAEPELVTQLGIKPELAEKLVWITHGERQCLAPDSLKGMDFQADLGHSTLLVNLPQAYMEYSDVDWDPPARWDNGIPGIILDYNINNQLRHDQESGSEEQSISGNGTLGANLGAWRLRADWQASYDHRDDDENTSTLHDQSWSRYYAYRALPTLGAKLTLGESYLQSDVFDSFNYIGASVISDDQMLPPKLRGYAPEIVGIARSNAKVKVSWQGRVLYETQVPAGPFRIQDLNQSVSGTLHVTVEEQNGQTQEFDVNTASVPFLTRPGMVRYKMALGRPQDWDHHPITGTFASAEASWGVTNGWSLYGGAIGESNYQAVALGSGKDLGVVGAVAVDITHSIAHMPQDDGFDGETLQGNSYRISYSRDFDEIDSRLTFAGYRFSEKNFMSMSDYLDAKTYHHLNAGHEKERYTVTYNQNFREQGMSAYFSYSRSTFWDSPDQSNYNLSLSWYFDLGSIKNLSASLNGYRSEYNGDKDDGVYISLSVPWGNDSISYNGTFNGNQHRNQLGYSGHSQNGDNWQLHVGQDEQGAQADGYYSHQGALTDIDLSADYEEGSYRSLGMSLRGGMTLTTQGGALHRGSLAGSTRLLVDTDGIADVPVSGNGSPTSTNIFGKAVIADVGSYSRSLARIDLNKLPEKAEATKSVVQITLTEGAIGYRHFDVVSGEKMMAVFRLADGDFPPFGAEVKNERQQQLGLVADDGNAWLAGVKAGETLKVFWDGAAQCEASLPPTFTPELLANALLLPCKMLEGQPPTAPQKSSPLPAQPLIQEHTQTDGQPAAPVATTTQTPPIPLADNHAVNRKDME
>NC_021812.2|WP_001044459.1|3512076_3512850_+|fimbria/pilus-periplasmic-chaperone
MNKTNHFKRQALIASVLLAAPLVSHSAIVPDRTRVIFNGNENSITVTLKNGNATLPYLAQAWLEDDKFAKDTRYFTALPPLQRIEPKSDGQVKVQPLPAAASLPQDRESLFYFNVREIPPKSDKPNTLQLALQTRIKFFYRPVAVARQVDKTHPWQTKLTLTYQGDGVIFDNPTPFYLVISNAGSKENETASGFKNLLIAPREKVTSPIKGASLGSSPVVGYVDDYGGHRLLVFTCSGNTCKVNEEKTRDAEKKANK
>NC_021812.2|WP_000178265.1|3512869_3513376_+|fimbrial-protein
MTMLTRWKMLVLLCGGFVAGTEAAGTKTVQLELHLVVTQPPPCTVGGASVEFGDVLTTKVGDASQTKPVGYSLNCDGRASDYLKLQIQGTTTTISGEQVLQTSVQGLGIRIQQAGNKQLVPVGITDWLNFTLSGSNGPELEAVPVKEPSTQLAGGDFNASATLVVDYQ
>NC_021812.2|WP_000832395.1|3513390_3513861_+|fimbrial-protein
MKRVLILTLLITQFACADNLTFHGKLINPPACTINNGETLEVSFGSVIIDNIDGVNYLTEIPWTLTCDSSFRDDALTFTLSYLGTATPYSAKALTTSVPELGIELQQNGTVFPPGTSLTINESSLPTLKAVPVKQPGKEPAEGDFEAFATLQVDYQ
>NC_021812.2|WP_001079648.1|3513857_3514394_+|fimbrial-protein
MNRIFQTAGHLIGGVMLWAVCNTLPAATPNVHYSGKLVAGACNLVVDNDTMATVDFHTIGSDNFDASGQTTPVPFTLSLQDCKTALANGVLVTFQGVEDSTLPGLLALEPSSEASGFAIGVETVAQQRLDINAVQGTAFMLKEGITTINLQARLQKYAGEDVMPGEFKGSATVSFEYQ

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NC_021812_2	2.8\|3484359\|28\|NC_021812\|PILER-CR	3484359-3484386	28	NC_009927	Acaryochloris marina MBIC11017 plasmid pREB2, complete sequence	337987-338014	5	0.821
NC_021812_2	2.24\|3485331\|32\|NC_021812\|PILER-CR	3485331-3485362	32	NC_008269	Rhodococcus jostii RHA1 plasmid pRHL1, complete sequence	509804-509835	5	0.844
NC_021812_2	2.43\|3485316\|32\|NC_021812\|CRT,CRISPRCasFinder	3485316-3485347	32	NC_008269	Rhodococcus jostii RHA1 plasmid pRHL1, complete sequence	509804-509835	5	0.844
NC_021812_2	2.11\|3484538\|32\|NC_021812\|PILER-CR	3484538-3484569	32	MT774487	Salmonella phage MG40, complete genome	21746-21777	6	0.812
NC_021812_2	2.24\|3485331\|32\|NC_021812\|PILER-CR	3485331-3485362	32	NZ_CP025013	Rhizobium leguminosarum strain Norway plasmid pRLN1, complete sequence	336397-336428	6	0.812
NC_021812_2	2.24\|3485331\|32\|NC_021812\|PILER-CR	3485331-3485362	32	NC_019201	Streptomyces sp. x4(2010) plasmid pTSC1, complete sequence	254-285	6	0.812
NC_021812_2	2.30\|3484523\|32\|NC_021812\|CRT,CRISPRCasFinder	3484523-3484554	32	MT774487	Salmonella phage MG40, complete genome	21746-21777	6	0.812
NC_021812_2	2.43\|3485316\|32\|NC_021812\|CRT,CRISPRCasFinder	3485316-3485347	32	NZ_CP025013	Rhizobium leguminosarum strain Norway plasmid pRLN1, complete sequence	336397-336428	6	0.812
NC_021812_2	2.43\|3485316\|32\|NC_021812\|CRT,CRISPRCasFinder	3485316-3485347	32	NC_019201	Streptomyces sp. x4(2010) plasmid pTSC1, complete sequence	254-285	6	0.812
NC_021812_2	2.7\|3484298\|32\|NC_021812\|CRISPRCasFinder,CRT,PILER-CR	3484298-3484329	32	NZ_CP013929	Alteromonas mediterranea strain UM8 plasmid pAMEDUM8_300, complete sequence	188177-188208	7	0.781
NC_021812_2	2.7\|3484298\|32\|NC_021812\|CRISPRCasFinder,CRT,PILER-CR	3484298-3484329	32	CP013931	Alteromonas mediterranea strain U10 plasmid pAMED10_300, complete sequence	192938-192969	7	0.781
NC_021812_2	2.7\|3484298\|32\|NC_021812\|CRISPRCasFinder,CRT,PILER-CR	3484298-3484329	32	NC_019394	Alteromonas mediterranea DE1 plasmid pAMDE1, complete sequence	188204-188235	7	0.781
NC_021812_2	2.11\|3484538\|32\|NC_021812\|PILER-CR	3484538-3484569	32	JQ288021	Salmonella phage SPN3UB, complete genome	39452-39483	7	0.781
NC_021812_2	2.11\|3484538\|32\|NC_021812\|PILER-CR	3484538-3484569	32	MH370364	Salmonella phage S107, complete genome	29959-29990	7	0.781
NC_021812_2	2.11\|3484538\|32\|NC_021812\|PILER-CR	3484538-3484569	32	MH370382	Salmonella phage S135, complete genome	29959-29990	7	0.781
NC_021812_2	2.11\|3484538\|32\|NC_021812\|PILER-CR	3484538-3484569	32	MH370383	Salmonella phage S137, complete genome	29959-29990	7	0.781
NC_021812_2	2.14\|3484721\|32\|NC_021812\|PILER-CR	3484721-3484752	32	NZ_CP054841	Acidovorax sp. 16-35-5 plasmid unnamed1, complete sequence	535406-535437	7	0.781
NC_021812_2	2.16\|3484843\|32\|NC_021812\|PILER-CR	3484843-3484874	32	NZ_CP024773	Bacillus thuringiensis LM1212 plasmid pLM2, complete sequence	29048-29079	7	0.781
NC_021812_2	2.16\|3484843\|32\|NC_021812\|PILER-CR	3484843-3484874	32	NZ_CP041075	Bacillus tropicus strain LM1212-W3 plasmid p2, complete sequence	142294-142325	7	0.781
NC_021812_2	2.20\|3485087\|32\|NC_021812\|PILER-CR	3485087-3485118	32	NZ_CP031397	Borreliella burgdorferi strain MM1 plasmid plsm_lp54, complete sequence	50725-50756	7	0.781
NC_021812_2	2.20\|3485087\|32\|NC_021812\|PILER-CR	3485087-3485118	32	NZ_CP019854	Borreliella burgdorferi plasmid lp54, complete sequence	50437-50468	7	0.781
NC_021812_2	2.20\|3485087\|32\|NC_021812\|PILER-CR	3485087-3485118	32	NZ_CP019765	Borreliella burgdorferi strain B31_NRZ isolate B31 plasmid p_lp54, complete sequence	50437-50468	7	0.781
NC_021812_2	2.20\|3485087\|32\|NC_021812\|PILER-CR	3485087-3485118	32	NC_011784	Borreliella burgdorferi ZS7 plasmid ZS7_lp54, complete sequence	50424-50455	7	0.781
NC_021812_2	2.20\|3485087\|32\|NC_021812\|PILER-CR	3485087-3485118	32	NZ_CP017218	Borreliella burgdorferi strain B331 plasmid B331_lp54, complete sequence	3204-3235	7	0.781
NC_021812_2	2.20\|3485087\|32\|NC_021812\|PILER-CR	3485087-3485118	32	NC_013130	Borreliella burgdorferi N40 plasmid N40_lp54, complete sequence	50571-50602	7	0.781
NC_021812_2	2.20\|3485087\|32\|NC_021812\|PILER-CR	3485087-3485118	32	NC_013129	Borreliella burgdorferi JD1 plasmid JD1_lp54, complete sequence	49716-49747	7	0.781
NC_021812_2	2.20\|3485087\|32\|NC_021812\|PILER-CR	3485087-3485118	32	NC_001857	Borreliella burgdorferi B31 plasmid lp54, complete sequence	50444-50475	7	0.781
NC_021812_2	2.24\|3485331\|32\|NC_021812\|PILER-CR	3485331-3485362	32	MH509446	Gordonia phage DelRio, complete genome	6223-6254	7	0.781
NC_021812_2	2.24\|3485331\|32\|NC_021812\|PILER-CR	3485331-3485362	32	MH509446	Gordonia phage DelRio, complete genome	6229-6260	7	0.781
NC_021812_2	2.24\|3485331\|32\|NC_021812\|PILER-CR	3485331-3485362	32	MT758688	Mycobacterium phage CELFI, complete genome	74684-74715	7	0.781
NC_021812_2	2.24\|3485331\|32\|NC_021812\|PILER-CR	3485331-3485362	32	NC_006363	Nocardia farcinica IFM 10152 plasmid pNF2, complete sequence	85980-86011	7	0.781
NC_021812_2	2.24\|3485331\|32\|NC_021812\|PILER-CR	3485331-3485362	32	NZ_LN868942	Nocardia farcinica strain NCTC11134 plasmid 5, complete sequence	39475-39506	7	0.781
NC_021812_2	2.24\|3485331\|32\|NC_021812\|PILER-CR	3485331-3485362	32	NZ_CP031420	Nocardia farcinica strain W6977 plasmid unnamed2, complete sequence	10466-10497	7	0.781
NC_021812_2	2.24\|3485331\|32\|NC_021812\|PILER-CR	3485331-3485362	32	NZ_CP029452	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence	619925-619956	7	0.781
NC_021812_2	2.24\|3485331\|32\|NC_021812\|PILER-CR	3485331-3485362	32	NC_008697	Nocardioides sp. JS614 plasmid pNOCA01, complete sequence	117019-117050	7	0.781
NC_021812_2	2.25\|3485392\|32\|NC_021812\|PILER-CR	3485392-3485423	32	DQ838728	Lactococcus phage P335, complete genome	1117-1148	7	0.781
NC_021812_2	2.30\|3484523\|32\|NC_021812\|CRT,CRISPRCasFinder	3484523-3484554	32	JQ288021	Salmonella phage SPN3UB, complete genome	39452-39483	7	0.781
NC_021812_2	2.30\|3484523\|32\|NC_021812\|CRT,CRISPRCasFinder	3484523-3484554	32	MH370364	Salmonella phage S107, complete genome	29959-29990	7	0.781
NC_021812_2	2.30\|3484523\|32\|NC_021812\|CRT,CRISPRCasFinder	3484523-3484554	32	MH370382	Salmonella phage S135, complete genome	29959-29990	7	0.781
NC_021812_2	2.30\|3484523\|32\|NC_021812\|CRT,CRISPRCasFinder	3484523-3484554	32	MH370383	Salmonella phage S137, complete genome	29959-29990	7	0.781
NC_021812_2	2.33\|3484706\|32\|NC_021812\|CRT,CRISPRCasFinder	3484706-3484737	32	NZ_CP054841	Acidovorax sp. 16-35-5 plasmid unnamed1, complete sequence	535406-535437	7	0.781
NC_021812_2	2.35\|3484828\|32\|NC_021812\|CRT,CRISPRCasFinder	3484828-3484859	32	NZ_CP024773	Bacillus thuringiensis LM1212 plasmid pLM2, complete sequence	29048-29079	7	0.781
NC_021812_2	2.35\|3484828\|32\|NC_021812\|CRT,CRISPRCasFinder	3484828-3484859	32	NZ_CP041075	Bacillus tropicus strain LM1212-W3 plasmid p2, complete sequence	142294-142325	7	0.781
NC_021812_2	2.39\|3485072\|32\|NC_021812\|CRT,CRISPRCasFinder	3485072-3485103	32	NZ_CP031397	Borreliella burgdorferi strain MM1 plasmid plsm_lp54, complete sequence	50725-50756	7	0.781
NC_021812_2	2.39\|3485072\|32\|NC_021812\|CRT,CRISPRCasFinder	3485072-3485103	32	NZ_CP019854	Borreliella burgdorferi plasmid lp54, complete sequence	50437-50468	7	0.781
NC_021812_2	2.39\|3485072\|32\|NC_021812\|CRT,CRISPRCasFinder	3485072-3485103	32	NZ_CP019765	Borreliella burgdorferi strain B31_NRZ isolate B31 plasmid p_lp54, complete sequence	50437-50468	7	0.781
NC_021812_2	2.39\|3485072\|32\|NC_021812\|CRT,CRISPRCasFinder	3485072-3485103	32	NC_011784	Borreliella burgdorferi ZS7 plasmid ZS7_lp54, complete sequence	50424-50455	7	0.781
NC_021812_2	2.39\|3485072\|32\|NC_021812\|CRT,CRISPRCasFinder	3485072-3485103	32	NZ_CP017218	Borreliella burgdorferi strain B331 plasmid B331_lp54, complete sequence	3204-3235	7	0.781
NC_021812_2	2.39\|3485072\|32\|NC_021812\|CRT,CRISPRCasFinder	3485072-3485103	32	NC_013130	Borreliella burgdorferi N40 plasmid N40_lp54, complete sequence	50571-50602	7	0.781
NC_021812_2	2.39\|3485072\|32\|NC_021812\|CRT,CRISPRCasFinder	3485072-3485103	32	NC_013129	Borreliella burgdorferi JD1 plasmid JD1_lp54, complete sequence	49716-49747	7	0.781
NC_021812_2	2.39\|3485072\|32\|NC_021812\|CRT,CRISPRCasFinder	3485072-3485103	32	NC_001857	Borreliella burgdorferi B31 plasmid lp54, complete sequence	50444-50475	7	0.781
NC_021812_2	2.43\|3485316\|32\|NC_021812\|CRT,CRISPRCasFinder	3485316-3485347	32	MH509446	Gordonia phage DelRio, complete genome	6223-6254	7	0.781
NC_021812_2	2.43\|3485316\|32\|NC_021812\|CRT,CRISPRCasFinder	3485316-3485347	32	MH509446	Gordonia phage DelRio, complete genome	6229-6260	7	0.781
NC_021812_2	2.43\|3485316\|32\|NC_021812\|CRT,CRISPRCasFinder	3485316-3485347	32	MT758688	Mycobacterium phage CELFI, complete genome	74684-74715	7	0.781
NC_021812_2	2.43\|3485316\|32\|NC_021812\|CRT,CRISPRCasFinder	3485316-3485347	32	NC_006363	Nocardia farcinica IFM 10152 plasmid pNF2, complete sequence	85980-86011	7	0.781
NC_021812_2	2.43\|3485316\|32\|NC_021812\|CRT,CRISPRCasFinder	3485316-3485347	32	NZ_LN868942	Nocardia farcinica strain NCTC11134 plasmid 5, complete sequence	39475-39506	7	0.781
NC_021812_2	2.43\|3485316\|32\|NC_021812\|CRT,CRISPRCasFinder	3485316-3485347	32	NZ_CP031420	Nocardia farcinica strain W6977 plasmid unnamed2, complete sequence	10466-10497	7	0.781
NC_021812_2	2.43\|3485316\|32\|NC_021812\|CRT,CRISPRCasFinder	3485316-3485347	32	NZ_CP029452	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence	619925-619956	7	0.781
NC_021812_2	2.43\|3485316\|32\|NC_021812\|CRT,CRISPRCasFinder	3485316-3485347	32	NC_008697	Nocardioides sp. JS614 plasmid pNOCA01, complete sequence	117019-117050	7	0.781
NC_021812_2	2.44\|3485377\|32\|NC_021812\|CRT,CRISPRCasFinder	3485377-3485408	32	DQ838728	Lactococcus phage P335, complete genome	1117-1148	7	0.781
NC_021812_3	3.13\|3502578\|32\|NC_021812\|CRISPRCasFinder,CRT,PILER-CR	3502578-3502609	32	NC_011366	Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG202, complete sequence	208454-208485	7	0.781
NC_021812_3	3.13\|3502578\|32\|NC_021812\|CRISPRCasFinder,CRT,PILER-CR	3502578-3502609	32	NC_017958	Tistrella mobilis KA081020-065 plasmid pTM3, complete sequence	449563-449594	7	0.781
NC_021812_3	3.13\|3502578\|32\|NC_021812\|CRISPRCasFinder,CRT,PILER-CR	3502578-3502609	32	NZ_CP035001	Rhizobium acidisoli strain FH23 plasmid pRapFH23c, complete sequence	167100-167131	7	0.781
NC_021812_2	2.2\|3483993\|32\|NC_021812\|CRISPRCasFinder,CRT,PILER-CR	3483993-3484024	32	MN855803	Bacteriophage sp. isolate 108, partial genome	10057-10088	8	0.75
NC_021812_2	2.6\|3484237\|32\|NC_021812\|CRISPRCasFinder,CRT,PILER-CR	3484237-3484268	32	NZ_CP016489	Synechococcus sp. PCC 8807 plasmid unnamed6, complete sequence	8862-8893	8	0.75
NC_021812_2	2.6\|3484237\|32\|NC_021812\|CRISPRCasFinder,CRT,PILER-CR	3484237-3484268	32	NZ_CP016476	Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence	151600-151631	8	0.75
NC_021812_2	2.15\|3484782\|32\|NC_021812\|PILER-CR	3484782-3484813	32	NZ_CP016179	Vibrio breoganii strain FF50 plasmid unnamed1, complete sequence	203354-203385	8	0.75
NC_021812_2	2.19\|3485026\|32\|NC_021812\|PILER-CR	3485026-3485057	32	AP013976	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C7-MedDCM-OCT-S26-C28, * SEQUENCING IN PROGRESS *	6246-6277	8	0.75
NC_021812_2	2.19\|3485026\|32\|NC_021812\|PILER-CR	3485026-3485057	32	JX536274	Uncultured Mediterranean phage MEDS5 group fosmid MedDCM-OCT-S15-C5, complete sequence	3959-3990	8	0.75
NC_021812_2	2.24\|3485331\|32\|NC_021812\|PILER-CR	3485331-3485362	32	NZ_CP025013	Rhizobium leguminosarum strain Norway plasmid pRLN1, complete sequence	336385-336416	8	0.75
NC_021812_2	2.24\|3485331\|32\|NC_021812\|PILER-CR	3485331-3485362	32	NC_008269	Rhodococcus jostii RHA1 plasmid pRHL1, complete sequence	509810-509841	8	0.75
NC_021812_2	2.24\|3485331\|32\|NC_021812\|PILER-CR	3485331-3485362	32	JQ807255	Environmental Halophage eHP-36, partial genome	3413-3444	8	0.75
NC_021812_2	2.24\|3485331\|32\|NC_021812\|PILER-CR	3485331-3485362	32	MH509446	Gordonia phage DelRio, complete genome	6235-6266	8	0.75
NC_021812_2	2.24\|3485331\|32\|NC_021812\|PILER-CR	3485331-3485362	32	NZ_CP029452	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence	619931-619962	8	0.75
NC_021812_2	2.24\|3485331\|32\|NC_021812\|PILER-CR	3485331-3485362	32	MK359319	Gordonia phage Parada, complete genome	5938-5969	8	0.75
NC_021812_2	2.24\|3485331\|32\|NC_021812\|PILER-CR	3485331-3485362	32	MK359319	Gordonia phage Parada, complete genome	5926-5957	8	0.75
NC_021812_2	2.24\|3485331\|32\|NC_021812\|PILER-CR	3485331-3485362	32	MK376958	Gordonia phage Brylie, complete genome	5938-5969	8	0.75
NC_021812_2	2.24\|3485331\|32\|NC_021812\|PILER-CR	3485331-3485362	32	MK376958	Gordonia phage Brylie, complete genome	5926-5957	8	0.75
NC_021812_2	2.24\|3485331\|32\|NC_021812\|PILER-CR	3485331-3485362	32	MH399781	Gordonia phage Nadeem, complete genome	5938-5969	8	0.75
NC_021812_2	2.24\|3485331\|32\|NC_021812\|PILER-CR	3485331-3485362	32	MH399781	Gordonia phage Nadeem, complete genome	5926-5957	8	0.75
NC_021812_2	2.24\|3485331\|32\|NC_021812\|PILER-CR	3485331-3485362	32	MK967392	Gordonia phage GrandSlam, complete genome	5971-6002	8	0.75
NC_021812_2	2.24\|3485331\|32\|NC_021812\|PILER-CR	3485331-3485362	32	MK967392	Gordonia phage GrandSlam, complete genome	5959-5990	8	0.75
NC_021812_2	2.24\|3485331\|32\|NC_021812\|PILER-CR	3485331-3485362	32	MK279893	Gordonia phage WheatThin, complete genome	5938-5969	8	0.75
NC_021812_2	2.24\|3485331\|32\|NC_021812\|PILER-CR	3485331-3485362	32	MK279893	Gordonia phage WheatThin, complete genome	5926-5957	8	0.75
NC_021812_2	2.24\|3485331\|32\|NC_021812\|PILER-CR	3485331-3485362	32	MT701595	Streptomyces phage Shaeky, complete genome	29602-29633	8	0.75
NC_021812_2	2.24\|3485331\|32\|NC_021812\|PILER-CR	3485331-3485362	32	NC_031247	Gordonia phage BetterKatz, complete genome	6191-6222	8	0.75
NC_021812_2	2.24\|3485331\|32\|NC_021812\|PILER-CR	3485331-3485362	32	NC_031247	Gordonia phage BetterKatz, complete genome	6179-6210	8	0.75
NC_021812_2	2.24\|3485331\|32\|NC_021812\|PILER-CR	3485331-3485362	32	MK305885	Gordonia phage Mulch, complete genome	5938-5969	8	0.75
NC_021812_2	2.24\|3485331\|32\|NC_021812\|PILER-CR	3485331-3485362	32	MK305885	Gordonia phage Mulch, complete genome	5926-5957	8	0.75
NC_021812_2	2.24\|3485331\|32\|NC_021812\|PILER-CR	3485331-3485362	32	NZ_CP014599	Yangia sp. CCB-MM3 plasmid unnamed3, complete sequence	68312-68343	8	0.75
NC_021812_2	2.24\|3485331\|32\|NC_021812\|PILER-CR	3485331-3485362	32	MG269973	TM7 phage DolZOral124_53_65, complete genome	38250-38281	8	0.75
NC_021812_2	2.25\|3485392\|32\|NC_021812\|PILER-CR	3485392-3485423	32	NC_014754	Sulfuricurvum kujiense DSM 16994 plasmid pSULKU01, complete sequence	76425-76456	8	0.75
NC_021812_2	2.34\|3484767\|32\|NC_021812\|CRT,CRISPRCasFinder	3484767-3484798	32	NZ_CP016179	Vibrio breoganii strain FF50 plasmid unnamed1, complete sequence	203354-203385	8	0.75
NC_021812_2	2.38\|3485011\|32\|NC_021812\|CRT,CRISPRCasFinder	3485011-3485042	32	AP013976	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C7-MedDCM-OCT-S26-C28, * SEQUENCING IN PROGRESS *	6246-6277	8	0.75
NC_021812_2	2.38\|3485011\|32\|NC_021812\|CRT,CRISPRCasFinder	3485011-3485042	32	JX536274	Uncultured Mediterranean phage MEDS5 group fosmid MedDCM-OCT-S15-C5, complete sequence	3959-3990	8	0.75
NC_021812_2	2.43\|3485316\|32\|NC_021812\|CRT,CRISPRCasFinder	3485316-3485347	32	NZ_CP025013	Rhizobium leguminosarum strain Norway plasmid pRLN1, complete sequence	336385-336416	8	0.75
NC_021812_2	2.43\|3485316\|32\|NC_021812\|CRT,CRISPRCasFinder	3485316-3485347	32	NC_008269	Rhodococcus jostii RHA1 plasmid pRHL1, complete sequence	509810-509841	8	0.75
NC_021812_2	2.43\|3485316\|32\|NC_021812\|CRT,CRISPRCasFinder	3485316-3485347	32	JQ807255	Environmental Halophage eHP-36, partial genome	3413-3444	8	0.75
NC_021812_2	2.43\|3485316\|32\|NC_021812\|CRT,CRISPRCasFinder	3485316-3485347	32	MH509446	Gordonia phage DelRio, complete genome	6235-6266	8	0.75
NC_021812_2	2.43\|3485316\|32\|NC_021812\|CRT,CRISPRCasFinder	3485316-3485347	32	NZ_CP029452	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence	619931-619962	8	0.75
NC_021812_2	2.43\|3485316\|32\|NC_021812\|CRT,CRISPRCasFinder	3485316-3485347	32	MK359319	Gordonia phage Parada, complete genome	5938-5969	8	0.75
NC_021812_2	2.43\|3485316\|32\|NC_021812\|CRT,CRISPRCasFinder	3485316-3485347	32	MK359319	Gordonia phage Parada, complete genome	5926-5957	8	0.75
NC_021812_2	2.43\|3485316\|32\|NC_021812\|CRT,CRISPRCasFinder	3485316-3485347	32	MK376958	Gordonia phage Brylie, complete genome	5938-5969	8	0.75
NC_021812_2	2.43\|3485316\|32\|NC_021812\|CRT,CRISPRCasFinder	3485316-3485347	32	MK376958	Gordonia phage Brylie, complete genome	5926-5957	8	0.75
NC_021812_2	2.43\|3485316\|32\|NC_021812\|CRT,CRISPRCasFinder	3485316-3485347	32	MH399781	Gordonia phage Nadeem, complete genome	5938-5969	8	0.75
NC_021812_2	2.43\|3485316\|32\|NC_021812\|CRT,CRISPRCasFinder	3485316-3485347	32	MH399781	Gordonia phage Nadeem, complete genome	5926-5957	8	0.75
NC_021812_2	2.43\|3485316\|32\|NC_021812\|CRT,CRISPRCasFinder	3485316-3485347	32	MK967392	Gordonia phage GrandSlam, complete genome	5971-6002	8	0.75
NC_021812_2	2.43\|3485316\|32\|NC_021812\|CRT,CRISPRCasFinder	3485316-3485347	32	MK967392	Gordonia phage GrandSlam, complete genome	5959-5990	8	0.75
NC_021812_2	2.43\|3485316\|32\|NC_021812\|CRT,CRISPRCasFinder	3485316-3485347	32	MK279893	Gordonia phage WheatThin, complete genome	5938-5969	8	0.75
NC_021812_2	2.43\|3485316\|32\|NC_021812\|CRT,CRISPRCasFinder	3485316-3485347	32	MK279893	Gordonia phage WheatThin, complete genome	5926-5957	8	0.75
NC_021812_2	2.43\|3485316\|32\|NC_021812\|CRT,CRISPRCasFinder	3485316-3485347	32	MT701595	Streptomyces phage Shaeky, complete genome	29602-29633	8	0.75
NC_021812_2	2.43\|3485316\|32\|NC_021812\|CRT,CRISPRCasFinder	3485316-3485347	32	NC_031247	Gordonia phage BetterKatz, complete genome	6191-6222	8	0.75
NC_021812_2	2.43\|3485316\|32\|NC_021812\|CRT,CRISPRCasFinder	3485316-3485347	32	NC_031247	Gordonia phage BetterKatz, complete genome	6179-6210	8	0.75
NC_021812_2	2.43\|3485316\|32\|NC_021812\|CRT,CRISPRCasFinder	3485316-3485347	32	MK305885	Gordonia phage Mulch, complete genome	5938-5969	8	0.75
NC_021812_2	2.43\|3485316\|32\|NC_021812\|CRT,CRISPRCasFinder	3485316-3485347	32	MK305885	Gordonia phage Mulch, complete genome	5926-5957	8	0.75
NC_021812_2	2.43\|3485316\|32\|NC_021812\|CRT,CRISPRCasFinder	3485316-3485347	32	NZ_CP014599	Yangia sp. CCB-MM3 plasmid unnamed3, complete sequence	68312-68343	8	0.75
NC_021812_2	2.43\|3485316\|32\|NC_021812\|CRT,CRISPRCasFinder	3485316-3485347	32	MG269973	TM7 phage DolZOral124_53_65, complete genome	38250-38281	8	0.75
NC_021812_2	2.44\|3485377\|32\|NC_021812\|CRT,CRISPRCasFinder	3485377-3485408	32	NC_014754	Sulfuricurvum kujiense DSM 16994 plasmid pSULKU01, complete sequence	76425-76456	8	0.75
NC_021812_3	3.5\|3502090\|32\|NC_021812\|CRISPRCasFinder,CRT,PILER-CR	3502090-3502121	32	NZ_CP028348	Novosphingobium sp. THN1 plasmid pTHN, complete sequence	1098771-1098802	8	0.75
NC_021812_3	3.5\|3502090\|32\|NC_021812\|CRISPRCasFinder,CRT,PILER-CR	3502090-3502121	32	NZ_CP014128	Pantoea vagans strain FDAARGOS_160 plasmid unnamed3, complete sequence	160189-160220	8	0.75
NC_021812_3	3.5\|3502090\|32\|NC_021812\|CRISPRCasFinder,CRT,PILER-CR	3502090-3502121	32	NC_014561	Pantoea vagans C9-1 plasmid pPag1, complete sequence	156443-156474	8	0.75
NC_021812_3	3.5\|3502090\|32\|NC_021812\|CRISPRCasFinder,CRT,PILER-CR	3502090-3502121	32	NC_010553	Burkholderia ambifaria MC40-6 plasmid pBMC401, complete sequence	137983-138014	8	0.75
NC_021812_3	3.7\|3502212\|32\|NC_021812\|CRISPRCasFinder,CRT,PILER-CR	3502212-3502243	32	LQ277707	Sequence 2 from Patent WO2016071503	12422-12453	8	0.75
NC_021812_3	3.7\|3502212\|32\|NC_021812\|CRISPRCasFinder,CRT,PILER-CR	3502212-3502243	32	LZ998055	JP 2017534684-A/2: Phage Therapy	12422-12453	8	0.75
NC_021812_3	3.8\|3502273\|32\|NC_021812\|CRISPRCasFinder,CRT,PILER-CR	3502273-3502304	32	CP001770	Spirosoma linguale DSM 74 plasmid pSLIN01, complete sequence	145771-145802	8	0.75
NC_021812_3	3.18\|3502883\|32\|NC_021812\|CRISPRCasFinder,CRT,PILER-CR	3502883-3502914	32	NZ_CP014942	Rhodococcus sp. BH4 plasmid, complete sequence	462005-462036	8	0.75
NC_021812_2	2.11\|3484538\|32\|NC_021812\|PILER-CR	3484538-3484569	32	MK448228	Klebsiella phage ST15-VIM1phi2.1, complete genome	32866-32897	9	0.719
NC_021812_2	2.18\|3484965\|32\|NC_021812\|PILER-CR	3484965-3484996	32	MT162468	Synechococcus phage S-H25, complete genome	69929-69960	9	0.719
NC_021812_2	2.20\|3485087\|32\|NC_021812\|PILER-CR	3485087-3485118	32	NZ_CP050083	Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b3, complete sequence	24080-24111	9	0.719
NC_021812_2	2.24\|3485331\|32\|NC_021812\|PILER-CR	3485331-3485362	32	NZ_CP028537	Enterobacter hormaechei strain SCEH020042 plasmid pQnrB4_020042, complete sequence	45644-45675	9	0.719
NC_021812_2	2.24\|3485331\|32\|NC_021812\|PILER-CR	3485331-3485362	32	NZ_AP023191	Escherichia coli strain TUM18530 plasmid pMTY18530-1_lncHI2, complete sequence	47035-47066	9	0.719
NC_021812_2	2.24\|3485331\|32\|NC_021812\|PILER-CR	3485331-3485362	32	MN539017	Salmonella sp. strain PJM1 plasmid pPJM1, complete sequence	71637-71668	9	0.719
NC_021812_2	2.24\|3485331\|32\|NC_021812\|PILER-CR	3485331-3485362	32	MN539018	Salmonella sp. strain OYZ4 plasmid pOYZ4, complete sequence	121312-121343	9	0.719
NC_021812_2	2.24\|3485331\|32\|NC_021812\|PILER-CR	3485331-3485362	32	MT077888	Escherichia coli plasmid p65, complete sequence	47129-47160	9	0.719
NC_021812_2	2.24\|3485331\|32\|NC_021812\|PILER-CR	3485331-3485362	32	NC_009838	Escherichia coli APEC O1 plasmid pAPEC-O1-R, complete sequence	46533-46564	9	0.719
NC_021812_2	2.24\|3485331\|32\|NC_021812\|PILER-CR	3485331-3485362	32	NZ_CP044306	Escherichia coli strain C27A plasmid pC27A-CTX-M-55, complete sequence	130757-130788	9	0.719
NC_021812_2	2.24\|3485331\|32\|NC_021812\|PILER-CR	3485331-3485362	32	NZ_CP039170	Salmonella enterica subsp. enterica serovar Goldcoast strain Sal-5364 plasmid pSal-5364, complete sequence	69620-69651	9	0.719
NC_021812_2	2.24\|3485331\|32\|NC_021812\|PILER-CR	3485331-3485362	32	CP048299	Salmonella enterica subsp. enterica serovar Schwarzengrund strain WAPHL_SAL-A00527 plasmid pN1566-2, complete sequence	195977-196008	9	0.719
NC_021812_2	2.24\|3485331\|32\|NC_021812\|PILER-CR	3485331-3485362	32	CP048303	Salmonella enterica subsp. enterica serovar Schwarzengrund strain WAPHL-SAL-A00375 plasmid p28945-2, complete sequence	41265-41296	9	0.719
NC_021812_2	2.24\|3485331\|32\|NC_021812\|PILER-CR	3485331-3485362	32	NZ_CP037959	Salmonella enterica subsp. enterica serovar Goldcoast strain R18.0877 plasmid pR18.0877_278k, complete sequence	45076-45107	9	0.719
NC_021812_2	2.24\|3485331\|32\|NC_021812\|PILER-CR	3485331-3485362	32	NZ_CP039861	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014880 plasmid p16-6773.1, complete sequence	239710-239741	9	0.719
NC_021812_2	2.24\|3485331\|32\|NC_021812\|PILER-CR	3485331-3485362	32	NZ_CP048776	Salmonella enterica subsp. enterica serovar Agona strain SG17-135 plasmid pSG17-135-HI2, complete sequence	45076-45107	9	0.719
NC_021812_2	2.24\|3485331\|32\|NC_021812\|PILER-CR	3485331-3485362	32	NC_019114	Salmonella enterica subsp. enterica serovar Heidelberg plasmid pSH111_227, complete sequence	43326-43357	9	0.719
NC_021812_2	2.24\|3485331\|32\|NC_021812\|PILER-CR	3485331-3485362	32	NZ_AP023198	Escherichia coli strain TUM18780 plasmid pMTY18780-1_lncHI2, complete sequence	47035-47066	9	0.719
NC_021812_2	2.24\|3485331\|32\|NC_021812\|PILER-CR	3485331-3485362	32	NZ_CP043223	Salmonella enterica subsp. enterica serovar Bredeney strain SA20114778WT plasmid pET1.1-IncH, complete sequence	5926-5957	9	0.719
NC_021812_2	2.24\|3485331\|32\|NC_021812\|PILER-CR	3485331-3485362	32	NZ_CP043223	Salmonella enterica subsp. enterica serovar Bredeney strain SA20114778WT plasmid pET1.1-IncH, complete sequence	240147-240178	9	0.719
NC_021812_2	2.24\|3485331\|32\|NC_021812\|PILER-CR	3485331-3485362	32	NZ_CP027411	Salmonella enterica strain FDAARGOS_319 plasmid unnamed, complete sequence	73185-73216	9	0.719
NC_021812_2	2.24\|3485331\|32\|NC_021812\|PILER-CR	3485331-3485362	32	JQ807227	Environmental Halophage eHP-6, partial genome	2886-2917	9	0.719
NC_021812_2	2.24\|3485331\|32\|NC_021812\|PILER-CR	3485331-3485362	32	NZ_CP029452	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence	619919-619950	9	0.719
NC_021812_2	2.24\|3485331\|32\|NC_021812\|PILER-CR	3485331-3485362	32	NC_019201	Streptomyces sp. x4(2010) plasmid pTSC1, complete sequence	248-279	9	0.719
NC_021812_2	2.25\|3485392\|32\|NC_021812\|PILER-CR	3485392-3485423	32	NC_013857	Azospirillum sp. B510 plasmid pAB510c, complete sequence	527800-527831	9	0.719
NC_021812_2	2.27\|3485514\|32\|NC_021812\|PILER-CR	3485514-3485545	32	NZ_CP043846	Staphylococcus epidermidis strain ATCC 12228 plasmid unnamed, complete sequence	16198-16229	9	0.719
NC_021812_2	2.27\|3485514\|32\|NC_021812\|PILER-CR	3485514-3485545	32	NZ_CP034117	Staphylococcus epidermidis strain CDC121 plasmid pSTA482, complete sequence	10125-10156	9	0.719
NC_021812_2	2.27\|3485514\|32\|NC_021812\|PILER-CR	3485514-3485545	32	NZ_CP034114	Staphylococcus epidermidis strain CDC120 plasmid pSTA493, complete sequence	2991-3022	9	0.719
NC_021812_2	2.27\|3485514\|32\|NC_021812\|PILER-CR	3485514-3485545	32	NZ_CP017904	Vibrio alginolyticus strain K05K4 plasmid pL289, complete sequence	177881-177912	9	0.719
NC_021812_2	2.27\|3485514\|32\|NC_021812\|PILER-CR	3485514-3485545	32	NZ_CP017901	Vibrio alginolyticus strain K04M5 plasmid pL294, complete sequence	183537-183568	9	0.719
NC_021812_2	2.27\|3485514\|32\|NC_021812\|PILER-CR	3485514-3485545	32	NZ_CP026804	Shigella flexneri strain 89-141 plasmid unnamed1	244387-244418	9	0.719
NC_021812_2	2.27\|3485514\|32\|NC_021812\|PILER-CR	3485514-3485545	32	NZ_CP017909	Vibrio alginolyticus strain K06K5 plasmid pL291, complete sequence	180101-180132	9	0.719
NC_021812_2	2.27\|3485514\|32\|NC_021812\|PILER-CR	3485514-3485545	32	NZ_CP017893	Vibrio alginolyticus strain K04M1 plasmid pL280, complete sequence	161475-161506	9	0.719
NC_021812_2	2.27\|3485514\|32\|NC_021812\|PILER-CR	3485514-3485545	32	NZ_CP017898	Vibrio alginolyticus isolate K04M3 plasmid pL294, complete sequence	182902-182933	9	0.719
NC_021812_2	2.30\|3484523\|32\|NC_021812\|CRT,CRISPRCasFinder	3484523-3484554	32	MK448228	Klebsiella phage ST15-VIM1phi2.1, complete genome	32866-32897	9	0.719
NC_021812_2	2.37\|3484950\|32\|NC_021812\|CRT,CRISPRCasFinder	3484950-3484981	32	MT162468	Synechococcus phage S-H25, complete genome	69929-69960	9	0.719
NC_021812_2	2.39\|3485072\|32\|NC_021812\|CRT,CRISPRCasFinder	3485072-3485103	32	NZ_CP050083	Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b3, complete sequence	24080-24111	9	0.719
NC_021812_2	2.43\|3485316\|32\|NC_021812\|CRT,CRISPRCasFinder	3485316-3485347	32	NZ_CP028537	Enterobacter hormaechei strain SCEH020042 plasmid pQnrB4_020042, complete sequence	45644-45675	9	0.719
NC_021812_2	2.43\|3485316\|32\|NC_021812\|CRT,CRISPRCasFinder	3485316-3485347	32	NZ_AP023191	Escherichia coli strain TUM18530 plasmid pMTY18530-1_lncHI2, complete sequence	47035-47066	9	0.719
NC_021812_2	2.43\|3485316\|32\|NC_021812\|CRT,CRISPRCasFinder	3485316-3485347	32	MN539017	Salmonella sp. strain PJM1 plasmid pPJM1, complete sequence	71637-71668	9	0.719
NC_021812_2	2.43\|3485316\|32\|NC_021812\|CRT,CRISPRCasFinder	3485316-3485347	32	MN539018	Salmonella sp. strain OYZ4 plasmid pOYZ4, complete sequence	121312-121343	9	0.719
NC_021812_2	2.43\|3485316\|32\|NC_021812\|CRT,CRISPRCasFinder	3485316-3485347	32	MT077888	Escherichia coli plasmid p65, complete sequence	47129-47160	9	0.719
NC_021812_2	2.43\|3485316\|32\|NC_021812\|CRT,CRISPRCasFinder	3485316-3485347	32	NC_009838	Escherichia coli APEC O1 plasmid pAPEC-O1-R, complete sequence	46533-46564	9	0.719
NC_021812_2	2.43\|3485316\|32\|NC_021812\|CRT,CRISPRCasFinder	3485316-3485347	32	NZ_CP044306	Escherichia coli strain C27A plasmid pC27A-CTX-M-55, complete sequence	130757-130788	9	0.719
NC_021812_2	2.43\|3485316\|32\|NC_021812\|CRT,CRISPRCasFinder	3485316-3485347	32	NZ_CP039170	Salmonella enterica subsp. enterica serovar Goldcoast strain Sal-5364 plasmid pSal-5364, complete sequence	69620-69651	9	0.719
NC_021812_2	2.43\|3485316\|32\|NC_021812\|CRT,CRISPRCasFinder	3485316-3485347	32	CP048299	Salmonella enterica subsp. enterica serovar Schwarzengrund strain WAPHL_SAL-A00527 plasmid pN1566-2, complete sequence	195977-196008	9	0.719
NC_021812_2	2.43\|3485316\|32\|NC_021812\|CRT,CRISPRCasFinder	3485316-3485347	32	CP048303	Salmonella enterica subsp. enterica serovar Schwarzengrund strain WAPHL-SAL-A00375 plasmid p28945-2, complete sequence	41265-41296	9	0.719
NC_021812_2	2.43\|3485316\|32\|NC_021812\|CRT,CRISPRCasFinder	3485316-3485347	32	NZ_CP037959	Salmonella enterica subsp. enterica serovar Goldcoast strain R18.0877 plasmid pR18.0877_278k, complete sequence	45076-45107	9	0.719
NC_021812_2	2.43\|3485316\|32\|NC_021812\|CRT,CRISPRCasFinder	3485316-3485347	32	NZ_CP039861	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014880 plasmid p16-6773.1, complete sequence	239710-239741	9	0.719
NC_021812_2	2.43\|3485316\|32\|NC_021812\|CRT,CRISPRCasFinder	3485316-3485347	32	NZ_CP048776	Salmonella enterica subsp. enterica serovar Agona strain SG17-135 plasmid pSG17-135-HI2, complete sequence	45076-45107	9	0.719
NC_021812_2	2.43\|3485316\|32\|NC_021812\|CRT,CRISPRCasFinder	3485316-3485347	32	NC_019114	Salmonella enterica subsp. enterica serovar Heidelberg plasmid pSH111_227, complete sequence	43326-43357	9	0.719
NC_021812_2	2.43\|3485316\|32\|NC_021812\|CRT,CRISPRCasFinder	3485316-3485347	32	NZ_AP023198	Escherichia coli strain TUM18780 plasmid pMTY18780-1_lncHI2, complete sequence	47035-47066	9	0.719
NC_021812_2	2.43\|3485316\|32\|NC_021812\|CRT,CRISPRCasFinder	3485316-3485347	32	NZ_CP043223	Salmonella enterica subsp. enterica serovar Bredeney strain SA20114778WT plasmid pET1.1-IncH, complete sequence	5926-5957	9	0.719
NC_021812_2	2.43\|3485316\|32\|NC_021812\|CRT,CRISPRCasFinder	3485316-3485347	32	NZ_CP043223	Salmonella enterica subsp. enterica serovar Bredeney strain SA20114778WT plasmid pET1.1-IncH, complete sequence	240147-240178	9	0.719
NC_021812_2	2.43\|3485316\|32\|NC_021812\|CRT,CRISPRCasFinder	3485316-3485347	32	NZ_CP027411	Salmonella enterica strain FDAARGOS_319 plasmid unnamed, complete sequence	73185-73216	9	0.719
NC_021812_2	2.43\|3485316\|32\|NC_021812\|CRT,CRISPRCasFinder	3485316-3485347	32	JQ807227	Environmental Halophage eHP-6, partial genome	2886-2917	9	0.719
NC_021812_2	2.43\|3485316\|32\|NC_021812\|CRT,CRISPRCasFinder	3485316-3485347	32	NZ_CP029452	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence	619919-619950	9	0.719
NC_021812_2	2.43\|3485316\|32\|NC_021812\|CRT,CRISPRCasFinder	3485316-3485347	32	NC_019201	Streptomyces sp. x4(2010) plasmid pTSC1, complete sequence	248-279	9	0.719
NC_021812_2	2.44\|3485377\|32\|NC_021812\|CRT,CRISPRCasFinder	3485377-3485408	32	NC_013857	Azospirillum sp. B510 plasmid pAB510c, complete sequence	527800-527831	9	0.719
NC_021812_2	2.46\|3485499\|32\|NC_021812\|CRT,CRISPRCasFinder	3485499-3485530	32	NZ_CP043846	Staphylococcus epidermidis strain ATCC 12228 plasmid unnamed, complete sequence	16198-16229	9	0.719
NC_021812_2	2.46\|3485499\|32\|NC_021812\|CRT,CRISPRCasFinder	3485499-3485530	32	NZ_CP034117	Staphylococcus epidermidis strain CDC121 plasmid pSTA482, complete sequence	10125-10156	9	0.719
NC_021812_2	2.46\|3485499\|32\|NC_021812\|CRT,CRISPRCasFinder	3485499-3485530	32	NZ_CP034114	Staphylococcus epidermidis strain CDC120 plasmid pSTA493, complete sequence	2991-3022	9	0.719
NC_021812_2	2.46\|3485499\|32\|NC_021812\|CRT,CRISPRCasFinder	3485499-3485530	32	NZ_CP017904	Vibrio alginolyticus strain K05K4 plasmid pL289, complete sequence	177881-177912	9	0.719
NC_021812_2	2.46\|3485499\|32\|NC_021812\|CRT,CRISPRCasFinder	3485499-3485530	32	NZ_CP017901	Vibrio alginolyticus strain K04M5 plasmid pL294, complete sequence	183537-183568	9	0.719
NC_021812_2	2.46\|3485499\|32\|NC_021812\|CRT,CRISPRCasFinder	3485499-3485530	32	NZ_CP026804	Shigella flexneri strain 89-141 plasmid unnamed1	244387-244418	9	0.719
NC_021812_2	2.46\|3485499\|32\|NC_021812\|CRT,CRISPRCasFinder	3485499-3485530	32	NZ_CP017909	Vibrio alginolyticus strain K06K5 plasmid pL291, complete sequence	180101-180132	9	0.719
NC_021812_2	2.46\|3485499\|32\|NC_021812\|CRT,CRISPRCasFinder	3485499-3485530	32	NZ_CP017893	Vibrio alginolyticus strain K04M1 plasmid pL280, complete sequence	161475-161506	9	0.719
NC_021812_2	2.46\|3485499\|32\|NC_021812\|CRT,CRISPRCasFinder	3485499-3485530	32	NZ_CP017898	Vibrio alginolyticus isolate K04M3 plasmid pL294, complete sequence	182902-182933	9	0.719
NC_021812_3	3.5\|3502090\|32\|NC_021812\|CRISPRCasFinder,CRT,PILER-CR	3502090-3502121	32	NZ_CP045722	Pantoea eucalypti strain LMG 24197 plasmid unnamed2, complete sequence	332-363	9	0.719
NC_021812_3	3.5\|3502090\|32\|NC_021812\|CRISPRCasFinder,CRT,PILER-CR	3502090-3502121	32	NZ_CP022519	Pantoea vagans strain FBS135 plasmid pPant3, complete sequence	62976-63007	9	0.719
NC_021812_3	3.5\|3502090\|32\|NC_021812\|CRISPRCasFinder,CRT,PILER-CR	3502090-3502121	32	NZ_CP028351	Pantoea vagans strain PV989 plasmid pPV989-167, complete sequence	144976-145007	9	0.719
NC_021812_3	3.9\|3502334\|32\|NC_021812\|CRISPRCasFinder,CRT,PILER-CR	3502334-3502365	32	MN062720	Microbacterium phage FuzzBuster, complete genome	19374-19405	9	0.719
NC_021812_3	3.10\|3502395\|32\|NC_021812\|CRISPRCasFinder,CRT,PILER-CR	3502395-3502426	32	MN694645	Marine virus AFVG_250M761, complete genome	31050-31081	9	0.719
NC_021812_3	3.13\|3502578\|32\|NC_021812\|CRISPRCasFinder,CRT,PILER-CR	3502578-3502609	32	DQ674738	Aeromonas phage phiO18P, complete genome	15707-15738	9	0.719
NC_021812_3	3.13\|3502578\|32\|NC_021812\|CRISPRCasFinder,CRT,PILER-CR	3502578-3502609	32	NZ_CP031166	Euzebya sp. DY32-46 plasmid pEDY32-46I, complete sequence	380725-380756	9	0.719
NC_021812_3	3.13\|3502578\|32\|NC_021812\|CRISPRCasFinder,CRT,PILER-CR	3502578-3502609	32	NZ_CP022367	Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence	153785-153816	9	0.719
NC_021812_3	3.14\|3502639\|32\|NC_021812\|CRISPRCasFinder,CRT,PILER-CR	3502639-3502670	32	MN693046	Marine virus AFVG_25M413, complete genome	4323-4354	9	0.719
NC_021812_3	3.14\|3502639\|32\|NC_021812\|CRISPRCasFinder,CRT,PILER-CR	3502639-3502670	32	MN693008	Marine virus AFVG_117M9, complete genome	4316-4347	9	0.719
NC_021812_3	3.17\|3502822\|32\|NC_021812\|CRISPRCasFinder,CRT,PILER-CR	3502822-3502853	32	NZ_CP021372	Rhizobium sp. ACO-34A plasmid pRACO34Ad, complete sequence	353298-353329	9	0.719
NC_021812_3	3.17\|3502822\|32\|NC_021812\|CRISPRCasFinder,CRT,PILER-CR	3502822-3502853	32	AM749121	Streptococcus phage M102 complete genome	7893-7924	9	0.719
NC_021812_3	3.17\|3502822\|32\|NC_021812\|CRISPRCasFinder,CRT,PILER-CR	3502822-3502853	32	NC_012884	Streptococcus phage M102, complete genome	7893-7924	9	0.719
NC_021812_2	2.1\|3483932\|32\|NC_021812\|CRISPRCasFinder,CRT	3483932-3483963	32	NC_016113	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence	1151729-1151760	10	0.688
NC_021812_2	2.1\|3483932\|32\|NC_021812\|CRISPRCasFinder,CRT	3483932-3483963	32	NC_017585	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence	661429-661460	10	0.688
NC_021812_2	2.13\|3484660\|32\|NC_021812\|PILER-CR	3484660-3484691	32	NC_024995	Gluconacetobacter europaeus plasmid pGE3 genomic DNA, complete sequence, strain: KGMA0119	5043-5074	10	0.688
NC_021812_2	2.18\|3484965\|32\|NC_021812\|PILER-CR	3484965-3484996	32	LN681539	Clostridium phage phiCD505, complete genome	8933-8964	10	0.688
NC_021812_2	2.18\|3484965\|32\|NC_021812\|PILER-CR	3484965-3484996	32	JX145341	Clostridium phage phiMMP02, complete genome	8932-8963	10	0.688
NC_021812_2	2.18\|3484965\|32\|NC_021812\|PILER-CR	3484965-3484996	32	NC_011398	Clostridium phage phiCD27, complete genome	8924-8955	10	0.688
NC_021812_2	2.18\|3484965\|32\|NC_021812\|PILER-CR	3484965-3484996	32	NC_048642	Clostridium phage CDKM9, complete genome	8871-8902	10	0.688
NC_021812_2	2.18\|3484965\|32\|NC_021812\|PILER-CR	3484965-3484996	32	KX228400	Clostridium phage CDKM15, complete genome	9066-9097	10	0.688
NC_021812_2	2.19\|3485026\|32\|NC_021812\|PILER-CR	3485026-3485057	32	NZ_CP020539	Sphingobium herbicidovorans strain MH plasmid pMSHV, complete sequence	53255-53286	10	0.688
NC_021812_2	2.20\|3485087\|32\|NC_021812\|PILER-CR	3485087-3485118	32	NZ_CP012188	Lactobacillus paracasei strain CAUH35 plasmid unnamed1, complete sequence	53401-53432	10	0.688
NC_021812_2	2.24\|3485331\|32\|NC_021812\|PILER-CR	3485331-3485362	32	NZ_KY689633	Escherichia coli strain 100R plasmid p100R, complete sequence	90192-90223	10	0.688
NC_021812_2	2.24\|3485331\|32\|NC_021812\|PILER-CR	3485331-3485362	32	NZ_KY689632	Escherichia coli strain 19-M12 plasmid p19M12, complete sequence	93444-93475	10	0.688
NC_021812_2	2.24\|3485331\|32\|NC_021812\|PILER-CR	3485331-3485362	32	NZ_CP045446	Salmonella enterica subsp. enterica serovar Schwarzengrund strain 9355 plasmid p280_9355, complete sequence	47441-47472	10	0.688
NC_021812_2	2.24\|3485331\|32\|NC_021812\|PILER-CR	3485331-3485362	32	NZ_KU743384	Escherichia coli strain SA26 plasmid pSA26-MCR-1, complete sequence	181822-181853	10	0.688
NC_021812_2	2.24\|3485331\|32\|NC_021812\|PILER-CR	3485331-3485362	32	NZ_KU254578	Escherichia coli strain YD786 plasmid pYD786-1, complete sequence	164955-164986	10	0.688
NC_021812_2	2.24\|3485331\|32\|NC_021812\|PILER-CR	3485331-3485362	32	NZ_KX129782	Escherichia coli strain S38 plasmid pS38, complete sequence	46429-46460	10	0.688
NC_021812_2	2.24\|3485331\|32\|NC_021812\|PILER-CR	3485331-3485362	32	NZ_CP015833	Escherichia coli O157 strain 180-PT54 plasmid unnamed, complete sequence	45081-45112	10	0.688
NC_021812_2	2.24\|3485331\|32\|NC_021812\|PILER-CR	3485331-3485362	32	LT221036	Yersinia pseudotuberculosis strain Yps.F1, plasmid pYps.F1 complete sequence	41890-41921	10	0.688
NC_021812_2	2.24\|3485331\|32\|NC_021812\|PILER-CR	3485331-3485362	32	CP019195	Salmonella enterica subsp. enterica serovar Senftenberg str. ATCC 43845 plasmid pATCC43845, complete sequence	98508-98539	10	0.688
NC_021812_2	2.24\|3485331\|32\|NC_021812\|PILER-CR	3485331-3485362	32	NZ_CP045449	Salmonella enterica subsp. enterica serovar Schwarzengrund strain 12888 plasmid p280_12888, complete sequence	47440-47471	10	0.688
NC_021812_2	2.24\|3485331\|32\|NC_021812\|PILER-CR	3485331-3485362	32	NZ_CP015096	Pelagibaca abyssi strain JLT2014 plasmid pPABY8, complete sequence	24746-24777	10	0.688
NC_021812_2	2.24\|3485331\|32\|NC_021812\|PILER-CR	3485331-3485362	32	MN732922	Escherichia coli strain 49K plasmid unnamed, complete sequence	70876-70907	10	0.688
NC_021812_2	2.24\|3485331\|32\|NC_021812\|PILER-CR	3485331-3485362	32	NZ_CP020493	Salmonella enterica subsp. enterica strain 08-00436 plasmid pSE08-00436-1, complete sequence	47996-48027	10	0.688
NC_021812_2	2.24\|3485331\|32\|NC_021812\|PILER-CR	3485331-3485362	32	CP031284	Escherichia fergusonii strain 40A plasmid p280_40A, complete sequence	60929-60960	10	0.688
NC_021812_2	2.24\|3485331\|32\|NC_021812\|PILER-CR	3485331-3485362	32	CP042895	Escherichia coli strain CFSAN061772 plasmid pCFSAN061772_02, complete sequence	106230-106261	10	0.688
NC_021812_2	2.24\|3485331\|32\|NC_021812\|PILER-CR	3485331-3485362	32	NZ_CP022735	Escherichia coli strain SA186 plasmid pSA186_MCR1, complete sequence	61639-61670	10	0.688
NC_021812_2	2.24\|3485331\|32\|NC_021812\|PILER-CR	3485331-3485362	32	CP042898	Escherichia coli strain CFSAN061771 plasmid pCFSAN061771_02, complete sequence	125697-125728	10	0.688
NC_021812_2	2.24\|3485331\|32\|NC_021812\|PILER-CR	3485331-3485362	32	NZ_CP022165	Escherichia coli strain M160133 plasmid pM160133_p1, complete sequence	45079-45110	10	0.688
NC_021812_2	2.24\|3485331\|32\|NC_021812\|PILER-CR	3485331-3485362	32	NZ_CP012931	Salmonella enterica subsp. enterica serovar Heidelberg strain N13-01290 plasmid pN13-01290_23, complete sequence	119619-119650	10	0.688
NC_021812_2	2.24\|3485331\|32\|NC_021812\|PILER-CR	3485331-3485362	32	NZ_CP023143	Escherichia coli strain CFSAN061770 plasmid pEGY1-MCR-1, complete sequence	136443-136474	10	0.688
NC_021812_2	2.24\|3485331\|32\|NC_021812\|PILER-CR	3485331-3485362	32	NZ_CP026936	Escherichia coli strain CFS3292 plasmid pCFS3292-1, complete sequence	46428-46459	10	0.688
NC_021812_2	2.24\|3485331\|32\|NC_021812\|PILER-CR	3485331-3485362	32	NZ_CP025402	Escherichia coli strain MS8345 plasmid pMS8345A, complete sequence	182643-182674	10	0.688
NC_021812_2	2.24\|3485331\|32\|NC_021812\|PILER-CR	3485331-3485362	32	NZ_CP026933	Escherichia coli strain CFS3273 plasmid pCFS3273-1, complete sequence	46278-46309	10	0.688
NC_021812_2	2.24\|3485331\|32\|NC_021812\|PILER-CR	3485331-3485362	32	NZ_MH924589	Escherichia coli strain RDB9 plasmid pRDB9, complete sequence	197026-197057	10	0.688
NC_021812_2	2.24\|3485331\|32\|NC_021812\|PILER-CR	3485331-3485362	32	NZ_MH208235	Escherichia coli strain APECA2 plasmid pJMA2, complete sequence	166860-166891	10	0.688
NC_021812_2	2.24\|3485331\|32\|NC_021812\|PILER-CR	3485331-3485362	32	NZ_MK169211	Escherichia coli strain DUK14-2 plasmid pMOO-32, complete sequence	46091-46122	10	0.688
NC_021812_2	2.24\|3485331\|32\|NC_021812\|PILER-CR	3485331-3485362	32	NZ_CP016838	Salmonella enterica subsp. enterica serovar Senftenberg strain 775W (ATCC 43845) plasmid pSSE-ATCC-43845, complete sequence	46820-46851	10	0.688
NC_021812_2	2.24\|3485331\|32\|NC_021812\|PILER-CR	3485331-3485362	32	NZ_CP045074	Paracoccus kondratievae strain BJQ0001 plasmid unnamed1, complete sequence	452410-452441	10	0.688
NC_021812_2	2.27\|3485514\|32\|NC_021812\|PILER-CR	3485514-3485545	32	NZ_CP044540	Borrelia sp. CA690 plasmid lp17, complete sequence	10481-10512	10	0.688
NC_021812_2	2.27\|3485514\|32\|NC_021812\|PILER-CR	3485514-3485545	32	NZ_LR215005	Mycoplasma conjunctivae strain NCTC10147 plasmid 9	126578-126609	10	0.688
NC_021812_2	2.32\|3484645\|32\|NC_021812\|CRT,CRISPRCasFinder	3484645-3484676	32	NC_024995	Gluconacetobacter europaeus plasmid pGE3 genomic DNA, complete sequence, strain: KGMA0119	5043-5074	10	0.688
NC_021812_2	2.37\|3484950\|32\|NC_021812\|CRT,CRISPRCasFinder	3484950-3484981	32	LN681539	Clostridium phage phiCD505, complete genome	8933-8964	10	0.688
NC_021812_2	2.37\|3484950\|32\|NC_021812\|CRT,CRISPRCasFinder	3484950-3484981	32	JX145341	Clostridium phage phiMMP02, complete genome	8932-8963	10	0.688
NC_021812_2	2.37\|3484950\|32\|NC_021812\|CRT,CRISPRCasFinder	3484950-3484981	32	NC_011398	Clostridium phage phiCD27, complete genome	8924-8955	10	0.688
NC_021812_2	2.37\|3484950\|32\|NC_021812\|CRT,CRISPRCasFinder	3484950-3484981	32	NC_048642	Clostridium phage CDKM9, complete genome	8871-8902	10	0.688
NC_021812_2	2.37\|3484950\|32\|NC_021812\|CRT,CRISPRCasFinder	3484950-3484981	32	KX228400	Clostridium phage CDKM15, complete genome	9066-9097	10	0.688
NC_021812_2	2.38\|3485011\|32\|NC_021812\|CRT,CRISPRCasFinder	3485011-3485042	32	NZ_CP020539	Sphingobium herbicidovorans strain MH plasmid pMSHV, complete sequence	53255-53286	10	0.688
NC_021812_2	2.39\|3485072\|32\|NC_021812\|CRT,CRISPRCasFinder	3485072-3485103	32	NZ_CP012188	Lactobacillus paracasei strain CAUH35 plasmid unnamed1, complete sequence	53401-53432	10	0.688
NC_021812_2	2.43\|3485316\|32\|NC_021812\|CRT,CRISPRCasFinder	3485316-3485347	32	NZ_KY689633	Escherichia coli strain 100R plasmid p100R, complete sequence	90192-90223	10	0.688
NC_021812_2	2.43\|3485316\|32\|NC_021812\|CRT,CRISPRCasFinder	3485316-3485347	32	NZ_KY689632	Escherichia coli strain 19-M12 plasmid p19M12, complete sequence	93444-93475	10	0.688
NC_021812_2	2.43\|3485316\|32\|NC_021812\|CRT,CRISPRCasFinder	3485316-3485347	32	NZ_CP045446	Salmonella enterica subsp. enterica serovar Schwarzengrund strain 9355 plasmid p280_9355, complete sequence	47441-47472	10	0.688
NC_021812_2	2.43\|3485316\|32\|NC_021812\|CRT,CRISPRCasFinder	3485316-3485347	32	NZ_KU743384	Escherichia coli strain SA26 plasmid pSA26-MCR-1, complete sequence	181822-181853	10	0.688
NC_021812_2	2.43\|3485316\|32\|NC_021812\|CRT,CRISPRCasFinder	3485316-3485347	32	NZ_KU254578	Escherichia coli strain YD786 plasmid pYD786-1, complete sequence	164955-164986	10	0.688
NC_021812_2	2.43\|3485316\|32\|NC_021812\|CRT,CRISPRCasFinder	3485316-3485347	32	NZ_KX129782	Escherichia coli strain S38 plasmid pS38, complete sequence	46429-46460	10	0.688
NC_021812_2	2.43\|3485316\|32\|NC_021812\|CRT,CRISPRCasFinder	3485316-3485347	32	NZ_CP015833	Escherichia coli O157 strain 180-PT54 plasmid unnamed, complete sequence	45081-45112	10	0.688
NC_021812_2	2.43\|3485316\|32\|NC_021812\|CRT,CRISPRCasFinder	3485316-3485347	32	LT221036	Yersinia pseudotuberculosis strain Yps.F1, plasmid pYps.F1 complete sequence	41890-41921	10	0.688
NC_021812_2	2.43\|3485316\|32\|NC_021812\|CRT,CRISPRCasFinder	3485316-3485347	32	CP019195	Salmonella enterica subsp. enterica serovar Senftenberg str. ATCC 43845 plasmid pATCC43845, complete sequence	98508-98539	10	0.688
NC_021812_2	2.43\|3485316\|32\|NC_021812\|CRT,CRISPRCasFinder	3485316-3485347	32	NZ_CP045449	Salmonella enterica subsp. enterica serovar Schwarzengrund strain 12888 plasmid p280_12888, complete sequence	47440-47471	10	0.688
NC_021812_2	2.43\|3485316\|32\|NC_021812\|CRT,CRISPRCasFinder	3485316-3485347	32	NZ_CP015096	Pelagibaca abyssi strain JLT2014 plasmid pPABY8, complete sequence	24746-24777	10	0.688
NC_021812_2	2.43\|3485316\|32\|NC_021812\|CRT,CRISPRCasFinder	3485316-3485347	32	MN732922	Escherichia coli strain 49K plasmid unnamed, complete sequence	70876-70907	10	0.688
NC_021812_2	2.43\|3485316\|32\|NC_021812\|CRT,CRISPRCasFinder	3485316-3485347	32	NZ_CP020493	Salmonella enterica subsp. enterica strain 08-00436 plasmid pSE08-00436-1, complete sequence	47996-48027	10	0.688
NC_021812_2	2.43\|3485316\|32\|NC_021812\|CRT,CRISPRCasFinder	3485316-3485347	32	CP031284	Escherichia fergusonii strain 40A plasmid p280_40A, complete sequence	60929-60960	10	0.688
NC_021812_2	2.43\|3485316\|32\|NC_021812\|CRT,CRISPRCasFinder	3485316-3485347	32	CP042895	Escherichia coli strain CFSAN061772 plasmid pCFSAN061772_02, complete sequence	106230-106261	10	0.688
NC_021812_2	2.43\|3485316\|32\|NC_021812\|CRT,CRISPRCasFinder	3485316-3485347	32	NZ_CP022735	Escherichia coli strain SA186 plasmid pSA186_MCR1, complete sequence	61639-61670	10	0.688
NC_021812_2	2.43\|3485316\|32\|NC_021812\|CRT,CRISPRCasFinder	3485316-3485347	32	CP042898	Escherichia coli strain CFSAN061771 plasmid pCFSAN061771_02, complete sequence	125697-125728	10	0.688
NC_021812_2	2.43\|3485316\|32\|NC_021812\|CRT,CRISPRCasFinder	3485316-3485347	32	NZ_CP022165	Escherichia coli strain M160133 plasmid pM160133_p1, complete sequence	45079-45110	10	0.688
NC_021812_2	2.43\|3485316\|32\|NC_021812\|CRT,CRISPRCasFinder	3485316-3485347	32	NZ_CP012931	Salmonella enterica subsp. enterica serovar Heidelberg strain N13-01290 plasmid pN13-01290_23, complete sequence	119619-119650	10	0.688
NC_021812_2	2.43\|3485316\|32\|NC_021812\|CRT,CRISPRCasFinder	3485316-3485347	32	NZ_CP023143	Escherichia coli strain CFSAN061770 plasmid pEGY1-MCR-1, complete sequence	136443-136474	10	0.688
NC_021812_2	2.43\|3485316\|32\|NC_021812\|CRT,CRISPRCasFinder	3485316-3485347	32	NZ_CP026936	Escherichia coli strain CFS3292 plasmid pCFS3292-1, complete sequence	46428-46459	10	0.688
NC_021812_2	2.43\|3485316\|32\|NC_021812\|CRT,CRISPRCasFinder	3485316-3485347	32	NZ_CP025402	Escherichia coli strain MS8345 plasmid pMS8345A, complete sequence	182643-182674	10	0.688
NC_021812_2	2.43\|3485316\|32\|NC_021812\|CRT,CRISPRCasFinder	3485316-3485347	32	NZ_CP026933	Escherichia coli strain CFS3273 plasmid pCFS3273-1, complete sequence	46278-46309	10	0.688
NC_021812_2	2.43\|3485316\|32\|NC_021812\|CRT,CRISPRCasFinder	3485316-3485347	32	NZ_MH924589	Escherichia coli strain RDB9 plasmid pRDB9, complete sequence	197026-197057	10	0.688
NC_021812_2	2.43\|3485316\|32\|NC_021812\|CRT,CRISPRCasFinder	3485316-3485347	32	NZ_MH208235	Escherichia coli strain APECA2 plasmid pJMA2, complete sequence	166860-166891	10	0.688
NC_021812_2	2.43\|3485316\|32\|NC_021812\|CRT,CRISPRCasFinder	3485316-3485347	32	NZ_MK169211	Escherichia coli strain DUK14-2 plasmid pMOO-32, complete sequence	46091-46122	10	0.688
NC_021812_2	2.43\|3485316\|32\|NC_021812\|CRT,CRISPRCasFinder	3485316-3485347	32	NZ_CP016838	Salmonella enterica subsp. enterica serovar Senftenberg strain 775W (ATCC 43845) plasmid pSSE-ATCC-43845, complete sequence	46820-46851	10	0.688
NC_021812_2	2.43\|3485316\|32\|NC_021812\|CRT,CRISPRCasFinder	3485316-3485347	32	NZ_CP045074	Paracoccus kondratievae strain BJQ0001 plasmid unnamed1, complete sequence	452410-452441	10	0.688
NC_021812_2	2.46\|3485499\|32\|NC_021812\|CRT,CRISPRCasFinder	3485499-3485530	32	NZ_CP044540	Borrelia sp. CA690 plasmid lp17, complete sequence	10481-10512	10	0.688
NC_021812_2	2.46\|3485499\|32\|NC_021812\|CRT,CRISPRCasFinder	3485499-3485530	32	NZ_LR215005	Mycoplasma conjunctivae strain NCTC10147 plasmid 9	126578-126609	10	0.688
NC_021812_3	3.1\|3501846\|32\|NC_021812\|CRISPRCasFinder,CRT	3501846-3501877	32	NZ_CP054615	Azospirillum oryzae strain KACC 14407 plasmid unnamed1, complete sequence	146919-146950	10	0.688
NC_021812_3	3.4\|3502029\|32\|NC_021812\|CRISPRCasFinder,CRT,PILER-CR	3502029-3502060	32	NZ_CP044072	Pseudomonas oryzihabitans strain FDAARGOS_657 plasmid unnamed1, complete sequence	99817-99848	10	0.688
NC_021812_3	3.9\|3502334\|32\|NC_021812\|CRISPRCasFinder,CRT,PILER-CR	3502334-3502365	32	NZ_CP019257	Escherichia coli strain 13TMH22 plasmid p13TMH22-1, complete sequence	20006-20037	10	0.688
NC_021812_3	3.9\|3502334\|32\|NC_021812\|CRISPRCasFinder,CRT,PILER-CR	3502334-3502365	32	NZ_CP019274	Escherichia coli strain 13P477T plasmid p13P477T-1, complete sequence	9024-9055	10	0.688
NC_021812_3	3.9\|3502334\|32\|NC_021812\|CRISPRCasFinder,CRT,PILER-CR	3502334-3502365	32	NZ_CP019275	Escherichia coli strain 13P477T plasmid p13P477T-2, complete sequence	27130-27161	10	0.688
NC_021812_3	3.9\|3502334\|32\|NC_021812\|CRISPRCasFinder,CRT,PILER-CR	3502334-3502365	32	NZ_CP019279	Escherichia coli strain 13P477T plasmid p13P477T-6, complete sequence	19363-19394	10	0.688
NC_021812_3	3.9\|3502334\|32\|NC_021812\|CRISPRCasFinder,CRT,PILER-CR	3502334-3502365	32	NZ_CP019246	Escherichia coli strain Combat13F7 plasmid pCombat13F7-1, complete sequence	23427-23458	10	0.688
NC_021812_3	3.9\|3502334\|32\|NC_021812\|CRISPRCasFinder,CRT,PILER-CR	3502334-3502365	32	NC_049342	Escherichia phage 500465-1, complete genome	24342-24373	10	0.688
NC_021812_3	3.9\|3502334\|32\|NC_021812\|CRISPRCasFinder,CRT,PILER-CR	3502334-3502365	32	KY271398	Klebsiella phage 4 LV-2017, complete genome	28240-28271	10	0.688
NC_021812_3	3.9\|3502334\|32\|NC_021812\|CRISPRCasFinder,CRT,PILER-CR	3502334-3502365	32	CP025900	Escherichia phage sp., complete genome	24342-24373	10	0.688
NC_021812_3	3.16\|3502761\|32\|NC_021812\|CRISPRCasFinder,CRT,PILER-CR	3502761-3502792	32	NZ_CP030264	Ensifer adhaerens strain Corn53 plasmid AB, complete sequence	1134787-1134818	10	0.688
NC_021812_2	2.27\|3485514\|32\|NC_021812\|PILER-CR	3485514-3485545	32	NZ_CP041669	Legionella israelensis strain L18-01051 plasmid unnamed, complete sequence	45678-45709	11	0.656
NC_021812_2	2.46\|3485499\|32\|NC_021812\|CRT,CRISPRCasFinder	3485499-3485530	32	NZ_CP041669	Legionella israelensis strain L18-01051 plasmid unnamed, complete sequence	45678-45709	11	0.656
NC_021812_3	3.13\|3502578\|32\|NC_021812\|CRISPRCasFinder,CRT,PILER-CR	3502578-3502609	32	NZ_CP054036	Rhizobium sp. JKLM13E plasmid pPR13E05, complete sequence	234768-234799	11	0.656
NC_021812_3	3.13\|3502578\|32\|NC_021812\|CRISPRCasFinder,CRT,PILER-CR	3502578-3502609	32	NZ_CP022568	Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK04, complete sequence	299431-299462	11	0.656

1. spacer 2.8|3484359|28|NC_021812|PILER-CR matches to NC_009927 (Acaryochloris marina MBIC11017 plasmid pREB2, complete sequence) position: , mismatch: 5, identity: 0.821

gatcgagtaacgtgcgctggaacgcgtc	CRISPR spacer
gattgaggaacgtgcgctggaacgatta	Protospacer
***.*** ****************  *

2. spacer 2.24|3485331|32|NC_021812|PILER-CR matches to NC_008269 (Rhodococcus jostii RHA1 plasmid pRHL1, complete sequence) position: , mismatch: 5, identity: 0.844

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tctgggtctcggtctcggtctcggttgtctgg	Protospacer
*** ********************* **   *

3. spacer 2.43|3485316|32|NC_021812|CRT,CRISPRCasFinder matches to NC_008269 (Rhodococcus jostii RHA1 plasmid pRHL1, complete sequence) position: , mismatch: 5, identity: 0.844

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tctgggtctcggtctcggtctcggttgtctgg	Protospacer
*** ********************* **   *

4. spacer 2.11|3484538|32|NC_021812|PILER-CR matches to MT774487 (Salmonella phage MG40, complete genome) position: , mismatch: 6, identity: 0.812

ccagaaagtgccggtagtgcctgatgaacgac	CRISPR spacer
ccagccagtgccggtagtgcctgatgaaatgg	Protospacer
****  **********************  .

5. spacer 2.24|3485331|32|NC_021812|PILER-CR matches to NZ_CP025013 (Rhizobium leguminosarum strain Norway plasmid pRLN1, complete sequence) position: , mismatch: 6, identity: 0.812

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tctcggtctcggtctcggtctcggtctcggtc	Protospacer
*************************  .*..

6. spacer 2.24|3485331|32|NC_021812|PILER-CR matches to NC_019201 (Streptomyces sp. x4(2010) plasmid pTSC1, complete sequence) position: , mismatch: 6, identity: 0.812

tctcggtctcggtctcggtctcg-gtagtgacg	CRISPR spacer
tctcagtctcggtctcagtctcgcgtgggggc-	Protospacer
****.***********.****** **.* *.*

7. spacer 2.30|3484523|32|NC_021812|CRT,CRISPRCasFinder matches to MT774487 (Salmonella phage MG40, complete genome) position: , mismatch: 6, identity: 0.812

ccagaaagtgccggtagtgcctgatgaacgac	CRISPR spacer
ccagccagtgccggtagtgcctgatgaaatgg	Protospacer
****  **********************  .

8. spacer 2.43|3485316|32|NC_021812|CRT,CRISPRCasFinder matches to NZ_CP025013 (Rhizobium leguminosarum strain Norway plasmid pRLN1, complete sequence) position: , mismatch: 6, identity: 0.812

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tctcggtctcggtctcggtctcggtctcggtc	Protospacer
*************************  .*..

9. spacer 2.43|3485316|32|NC_021812|CRT,CRISPRCasFinder matches to NC_019201 (Streptomyces sp. x4(2010) plasmid pTSC1, complete sequence) position: , mismatch: 6, identity: 0.812

tctcggtctcggtctcggtctcg-gtagtgacg	CRISPR spacer
tctcagtctcggtctcagtctcgcgtgggggc-	Protospacer
****.***********.****** **.* *.*

10. spacer 2.7|3484298|32|NC_021812|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013929 (Alteromonas mediterranea strain UM8 plasmid pAMEDUM8_300, complete sequence) position: , mismatch: 7, identity: 0.781

aatcact--gcgggggtatttagcggaaacggct	CRISPR spacer
--tcgctgcgcgggggtatttagcgaaatcgggg	Protospacer
  **.**  ****************.** ***

11. spacer 2.7|3484298|32|NC_021812|CRISPRCasFinder,CRT,PILER-CR matches to CP013931 (Alteromonas mediterranea strain U10 plasmid pAMED10_300, complete sequence) position: , mismatch: 7, identity: 0.781

aatcact--gcgggggtatttagcggaaacggct	CRISPR spacer
--tcgctgcgcgggggtatttagcgaaatcgggg	Protospacer
  **.**  ****************.** ***

12. spacer 2.7|3484298|32|NC_021812|CRISPRCasFinder,CRT,PILER-CR matches to NC_019394 (Alteromonas mediterranea DE1 plasmid pAMDE1, complete sequence) position: , mismatch: 7, identity: 0.781

aatcact--gcgggggtatttagcggaaacggct	CRISPR spacer
--tcgctgcgcgggggtatttagcgaaatcgggg	Protospacer
  **.**  ****************.** ***

13. spacer 2.11|3484538|32|NC_021812|PILER-CR matches to JQ288021 (Salmonella phage SPN3UB, complete genome) position: , mismatch: 7, identity: 0.781

ccagaaagtgccggtagtgcctgatgaacgac	CRISPR spacer
gcagccagtgccggtagtgcctgatgaaatgg	Protospacer
 ***  **********************  .

14. spacer 2.11|3484538|32|NC_021812|PILER-CR matches to MH370364 (Salmonella phage S107, complete genome) position: , mismatch: 7, identity: 0.781

ccagaaagtgccggtagtgcctgatgaacgac	CRISPR spacer
gcagccagtgccggtagtgcctgatgaaatgg	Protospacer
 ***  **********************  .

15. spacer 2.11|3484538|32|NC_021812|PILER-CR matches to MH370382 (Salmonella phage S135, complete genome) position: , mismatch: 7, identity: 0.781

ccagaaagtgccggtagtgcctgatgaacgac	CRISPR spacer
gcagccagtgccggtagtgcctgatgaaatgg	Protospacer
 ***  **********************  .

16. spacer 2.11|3484538|32|NC_021812|PILER-CR matches to MH370383 (Salmonella phage S137, complete genome) position: , mismatch: 7, identity: 0.781

ccagaaagtgccggtagtgcctgatgaacgac	CRISPR spacer
gcagccagtgccggtagtgcctgatgaaatgg	Protospacer
 ***  **********************  .

17. spacer 2.14|3484721|32|NC_021812|PILER-CR matches to NZ_CP054841 (Acidovorax sp. 16-35-5 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

ggcagcgggcgaggcaaacacattcggggcgt	CRISPR spacer
gccacggcgcgaggcaaacacattcaggtcgc	Protospacer
* **  * *****************.** **.

18. spacer 2.16|3484843|32|NC_021812|PILER-CR matches to NZ_CP024773 (Bacillus thuringiensis LM1212 plasmid pLM2, complete sequence) position: , mismatch: 7, identity: 0.781

gaatctaatgcaacagatgaataaacacgtaa	CRISPR spacer
gcttctaatgcaatagatgaagaaacaccaat	Protospacer
*  **********.******* ******  *

19. spacer 2.16|3484843|32|NC_021812|PILER-CR matches to NZ_CP041075 (Bacillus tropicus strain LM1212-W3 plasmid p2, complete sequence) position: , mismatch: 7, identity: 0.781

gaatctaatgcaacagatgaataaacacgtaa	CRISPR spacer
gcttctaatgcaatagatgaagaaacaccaat	Protospacer
*  **********.******* ******  *

20. spacer 2.20|3485087|32|NC_021812|PILER-CR matches to NZ_CP031397 (Borreliella burgdorferi strain MM1 plasmid plsm_lp54, complete sequence) position: , mismatch: 7, identity: 0.781

tgat-gaaatcgtcaataaaattattggcgcgc	CRISPR spacer
-gataaaaatcgtcgataacattattggcgaat	Protospacer
 *** .********.**** ********** ..

21. spacer 2.20|3485087|32|NC_021812|PILER-CR matches to NZ_CP019854 (Borreliella burgdorferi plasmid lp54, complete sequence) position: , mismatch: 7, identity: 0.781

tgat-gaaatcgtcaataaaattattggcgcgc	CRISPR spacer
-gataaaaatcgtcgataacattattggcgaat	Protospacer
 *** .********.**** ********** ..

22. spacer 2.20|3485087|32|NC_021812|PILER-CR matches to NZ_CP019765 (Borreliella burgdorferi strain B31_NRZ isolate B31 plasmid p_lp54, complete sequence) position: , mismatch: 7, identity: 0.781

tgat-gaaatcgtcaataaaattattggcgcgc	CRISPR spacer
-gataaaaatcgtcgataacattattggcgaat	Protospacer
 *** .********.**** ********** ..

23. spacer 2.20|3485087|32|NC_021812|PILER-CR matches to NC_011784 (Borreliella burgdorferi ZS7 plasmid ZS7_lp54, complete sequence) position: , mismatch: 7, identity: 0.781

tgat-gaaatcgtcaataaaattattggcgcgc	CRISPR spacer
-gataaaaatcgtcgataacattattggcgaat	Protospacer
 *** .********.**** ********** ..

24. spacer 2.20|3485087|32|NC_021812|PILER-CR matches to NZ_CP017218 (Borreliella burgdorferi strain B331 plasmid B331_lp54, complete sequence) position: , mismatch: 7, identity: 0.781

tgat-gaaatcgtcaataaaattattggcgcgc	CRISPR spacer
-gataaaaatcgtcgataacattattggcgaat	Protospacer
 *** .********.**** ********** ..

25. spacer 2.20|3485087|32|NC_021812|PILER-CR matches to NC_013130 (Borreliella burgdorferi N40 plasmid N40_lp54, complete sequence) position: , mismatch: 7, identity: 0.781

tgat-gaaatcgtcaataaaattattggcgcgc	CRISPR spacer
-gataaaaatcgtcgataacattattggcgaat	Protospacer
 *** .********.**** ********** ..

26. spacer 2.20|3485087|32|NC_021812|PILER-CR matches to NC_013129 (Borreliella burgdorferi JD1 plasmid JD1_lp54, complete sequence) position: , mismatch: 7, identity: 0.781

tgat-gaaatcgtcaataaaattattggcgcgc	CRISPR spacer
-gataaaaatcgtcgataacattattggcgaat	Protospacer
 *** .********.**** ********** ..

27. spacer 2.20|3485087|32|NC_021812|PILER-CR matches to NC_001857 (Borreliella burgdorferi B31 plasmid lp54, complete sequence) position: , mismatch: 7, identity: 0.781

tgat-gaaatcgtcaataaaattattggcgcgc	CRISPR spacer
-gataaaaatcgtcgataacattattggcgaat	Protospacer
 *** .********.**** ********** ..

28. spacer 2.24|3485331|32|NC_021812|PILER-CR matches to MH509446 (Gordonia phage DelRio, complete genome) position: , mismatch: 7, identity: 0.781

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tttcggtctcggtcgcggtctcggtgccctcg	Protospacer
*.************ **********. .  **

29. spacer 2.24|3485331|32|NC_021812|PILER-CR matches to MH509446 (Gordonia phage DelRio, complete genome) position: , mismatch: 7, identity: 0.781

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tctcggtttcggtctcggtcgcggtctcggtg	Protospacer
*******.************ ****  .*..*

30. spacer 2.24|3485331|32|NC_021812|PILER-CR matches to MT758688 (Mycobacterium phage CELFI, complete genome) position: , mismatch: 7, identity: 0.781

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tctcggtcccggtcccggtctcggtcccgttg	Protospacer
********.*****.**********  .* .*

31. spacer 2.24|3485331|32|NC_021812|PILER-CR matches to NC_006363 (Nocardia farcinica IFM 10152 plasmid pNF2, complete sequence) position: , mismatch: 7, identity: 0.781

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
gctcgatctcggtcgcggtctcggtgcggatg	Protospacer
 ****.******** **********.  **.*

32. spacer 2.24|3485331|32|NC_021812|PILER-CR matches to NZ_LN868942 (Nocardia farcinica strain NCTC11134 plasmid 5, complete sequence) position: , mismatch: 7, identity: 0.781

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
gctcgatctcggtcgcggtctcggtgcggatg	Protospacer
 ****.******** **********.  **.*

33. spacer 2.24|3485331|32|NC_021812|PILER-CR matches to NZ_CP031420 (Nocardia farcinica strain W6977 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.781

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
gctcgatctcggtcgcggtctcggtgcggatg	Protospacer
 ****.******** **********.  **.*

34. spacer 2.24|3485331|32|NC_021812|PILER-CR matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 7, identity: 0.781

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tctcggcctcggcctcggtctcggcctcggcg	Protospacer
******.*****.***********.  .*.**

35. spacer 2.24|3485331|32|NC_021812|PILER-CR matches to NC_008697 (Nocardioides sp. JS614 plasmid pNOCA01, complete sequence) position: , mismatch: 7, identity: 0.781

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
cctcggcctcggcctcggtctcggcggcggcg	Protospacer
.*****.*****.***********..*.*.**

36. spacer 2.25|3485392|32|NC_021812|PILER-CR matches to DQ838728 (Lactococcus phage P335, complete genome) position: , mismatch: 7, identity: 0.781

attttatttgacaaattggcggcatctcactg-	CRISPR spacer
ttgttatttcagaaattggcggcatc-cgctat	Protospacer
 * ****** * ************** *.**.

37. spacer 2.30|3484523|32|NC_021812|CRT,CRISPRCasFinder matches to JQ288021 (Salmonella phage SPN3UB, complete genome) position: , mismatch: 7, identity: 0.781

ccagaaagtgccggtagtgcctgatgaacgac	CRISPR spacer
gcagccagtgccggtagtgcctgatgaaatgg	Protospacer
 ***  **********************  .

38. spacer 2.30|3484523|32|NC_021812|CRT,CRISPRCasFinder matches to MH370364 (Salmonella phage S107, complete genome) position: , mismatch: 7, identity: 0.781

ccagaaagtgccggtagtgcctgatgaacgac	CRISPR spacer
gcagccagtgccggtagtgcctgatgaaatgg	Protospacer
 ***  **********************  .

39. spacer 2.30|3484523|32|NC_021812|CRT,CRISPRCasFinder matches to MH370382 (Salmonella phage S135, complete genome) position: , mismatch: 7, identity: 0.781

ccagaaagtgccggtagtgcctgatgaacgac	CRISPR spacer
gcagccagtgccggtagtgcctgatgaaatgg	Protospacer
 ***  **********************  .

40. spacer 2.30|3484523|32|NC_021812|CRT,CRISPRCasFinder matches to MH370383 (Salmonella phage S137, complete genome) position: , mismatch: 7, identity: 0.781

ccagaaagtgccggtagtgcctgatgaacgac	CRISPR spacer
gcagccagtgccggtagtgcctgatgaaatgg	Protospacer
 ***  **********************  .

41. spacer 2.33|3484706|32|NC_021812|CRT,CRISPRCasFinder matches to NZ_CP054841 (Acidovorax sp. 16-35-5 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

ggcagcgggcgaggcaaacacattcggggcgt	CRISPR spacer
gccacggcgcgaggcaaacacattcaggtcgc	Protospacer
* **  * *****************.** **.

42. spacer 2.35|3484828|32|NC_021812|CRT,CRISPRCasFinder matches to NZ_CP024773 (Bacillus thuringiensis LM1212 plasmid pLM2, complete sequence) position: , mismatch: 7, identity: 0.781

gaatctaatgcaacagatgaataaacacgtaa	CRISPR spacer
gcttctaatgcaatagatgaagaaacaccaat	Protospacer
*  **********.******* ******  *

43. spacer 2.35|3484828|32|NC_021812|CRT,CRISPRCasFinder matches to NZ_CP041075 (Bacillus tropicus strain LM1212-W3 plasmid p2, complete sequence) position: , mismatch: 7, identity: 0.781

gaatctaatgcaacagatgaataaacacgtaa	CRISPR spacer
gcttctaatgcaatagatgaagaaacaccaat	Protospacer
*  **********.******* ******  *

44. spacer 2.39|3485072|32|NC_021812|CRT,CRISPRCasFinder matches to NZ_CP031397 (Borreliella burgdorferi strain MM1 plasmid plsm_lp54, complete sequence) position: , mismatch: 7, identity: 0.781

tgat-gaaatcgtcaataaaattattggcgcgc	CRISPR spacer
-gataaaaatcgtcgataacattattggcgaat	Protospacer
 *** .********.**** ********** ..

45. spacer 2.39|3485072|32|NC_021812|CRT,CRISPRCasFinder matches to NZ_CP019854 (Borreliella burgdorferi plasmid lp54, complete sequence) position: , mismatch: 7, identity: 0.781

tgat-gaaatcgtcaataaaattattggcgcgc	CRISPR spacer
-gataaaaatcgtcgataacattattggcgaat	Protospacer
 *** .********.**** ********** ..

46. spacer 2.39|3485072|32|NC_021812|CRT,CRISPRCasFinder matches to NZ_CP019765 (Borreliella burgdorferi strain B31_NRZ isolate B31 plasmid p_lp54, complete sequence) position: , mismatch: 7, identity: 0.781

tgat-gaaatcgtcaataaaattattggcgcgc	CRISPR spacer
-gataaaaatcgtcgataacattattggcgaat	Protospacer
 *** .********.**** ********** ..

47. spacer 2.39|3485072|32|NC_021812|CRT,CRISPRCasFinder matches to NC_011784 (Borreliella burgdorferi ZS7 plasmid ZS7_lp54, complete sequence) position: , mismatch: 7, identity: 0.781

tgat-gaaatcgtcaataaaattattggcgcgc	CRISPR spacer
-gataaaaatcgtcgataacattattggcgaat	Protospacer
 *** .********.**** ********** ..

48. spacer 2.39|3485072|32|NC_021812|CRT,CRISPRCasFinder matches to NZ_CP017218 (Borreliella burgdorferi strain B331 plasmid B331_lp54, complete sequence) position: , mismatch: 7, identity: 0.781

tgat-gaaatcgtcaataaaattattggcgcgc	CRISPR spacer
-gataaaaatcgtcgataacattattggcgaat	Protospacer
 *** .********.**** ********** ..

49. spacer 2.39|3485072|32|NC_021812|CRT,CRISPRCasFinder matches to NC_013130 (Borreliella burgdorferi N40 plasmid N40_lp54, complete sequence) position: , mismatch: 7, identity: 0.781

tgat-gaaatcgtcaataaaattattggcgcgc	CRISPR spacer
-gataaaaatcgtcgataacattattggcgaat	Protospacer
 *** .********.**** ********** ..

50. spacer 2.39|3485072|32|NC_021812|CRT,CRISPRCasFinder matches to NC_013129 (Borreliella burgdorferi JD1 plasmid JD1_lp54, complete sequence) position: , mismatch: 7, identity: 0.781

tgat-gaaatcgtcaataaaattattggcgcgc	CRISPR spacer
-gataaaaatcgtcgataacattattggcgaat	Protospacer
 *** .********.**** ********** ..

51. spacer 2.39|3485072|32|NC_021812|CRT,CRISPRCasFinder matches to NC_001857 (Borreliella burgdorferi B31 plasmid lp54, complete sequence) position: , mismatch: 7, identity: 0.781

tgat-gaaatcgtcaataaaattattggcgcgc	CRISPR spacer
-gataaaaatcgtcgataacattattggcgaat	Protospacer
 *** .********.**** ********** ..

52. spacer 2.43|3485316|32|NC_021812|CRT,CRISPRCasFinder matches to MH509446 (Gordonia phage DelRio, complete genome) position: , mismatch: 7, identity: 0.781

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tttcggtctcggtcgcggtctcggtgccctcg	Protospacer
*.************ **********. .  **

53. spacer 2.43|3485316|32|NC_021812|CRT,CRISPRCasFinder matches to MH509446 (Gordonia phage DelRio, complete genome) position: , mismatch: 7, identity: 0.781

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tctcggtttcggtctcggtcgcggtctcggtg	Protospacer
*******.************ ****  .*..*

54. spacer 2.43|3485316|32|NC_021812|CRT,CRISPRCasFinder matches to MT758688 (Mycobacterium phage CELFI, complete genome) position: , mismatch: 7, identity: 0.781

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tctcggtcccggtcccggtctcggtcccgttg	Protospacer
********.*****.**********  .* .*

55. spacer 2.43|3485316|32|NC_021812|CRT,CRISPRCasFinder matches to NC_006363 (Nocardia farcinica IFM 10152 plasmid pNF2, complete sequence) position: , mismatch: 7, identity: 0.781

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
gctcgatctcggtcgcggtctcggtgcggatg	Protospacer
 ****.******** **********.  **.*

56. spacer 2.43|3485316|32|NC_021812|CRT,CRISPRCasFinder matches to NZ_LN868942 (Nocardia farcinica strain NCTC11134 plasmid 5, complete sequence) position: , mismatch: 7, identity: 0.781

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
gctcgatctcggtcgcggtctcggtgcggatg	Protospacer
 ****.******** **********.  **.*

57. spacer 2.43|3485316|32|NC_021812|CRT,CRISPRCasFinder matches to NZ_CP031420 (Nocardia farcinica strain W6977 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.781

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
gctcgatctcggtcgcggtctcggtgcggatg	Protospacer
 ****.******** **********.  **.*

58. spacer 2.43|3485316|32|NC_021812|CRT,CRISPRCasFinder matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 7, identity: 0.781

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tctcggcctcggcctcggtctcggcctcggcg	Protospacer
******.*****.***********.  .*.**

59. spacer 2.43|3485316|32|NC_021812|CRT,CRISPRCasFinder matches to NC_008697 (Nocardioides sp. JS614 plasmid pNOCA01, complete sequence) position: , mismatch: 7, identity: 0.781

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
cctcggcctcggcctcggtctcggcggcggcg	Protospacer
.*****.*****.***********..*.*.**

60. spacer 2.44|3485377|32|NC_021812|CRT,CRISPRCasFinder matches to DQ838728 (Lactococcus phage P335, complete genome) position: , mismatch: 7, identity: 0.781

attttatttgacaaattggcggcatctcactg-	CRISPR spacer
ttgttatttcagaaattggcggcatc-cgctat	Protospacer
 * ****** * ************** *.**.

61. spacer 3.13|3502578|32|NC_021812|CRISPRCasFinder,CRT,PILER-CR matches to NC_011366 (Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG202, complete sequence) position: , mismatch: 7, identity: 0.781

---gggcactatgaacggatcggcgctgatgccgg	CRISPR spacer
ttcgagc---atgaccggatcggcgctggtgccga	Protospacer
   *.**   **** *************.*****.

62. spacer 3.13|3502578|32|NC_021812|CRISPRCasFinder,CRT,PILER-CR matches to NC_017958 (Tistrella mobilis KA081020-065 plasmid pTM3, complete sequence) position: , mismatch: 7, identity: 0.781

gggcactatgaacggatcggcgctgatgccgg	CRISPR spacer
ggcggcggtgaaaggatcggcggtgatgccgg	Protospacer
**  .* .**** ********* *********

63. spacer 3.13|3502578|32|NC_021812|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP035001 (Rhizobium acidisoli strain FH23 plasmid pRapFH23c, complete sequence) position: , mismatch: 7, identity: 0.781

---gggcactatgaacggatcggcgctgatgccgg	CRISPR spacer
ttcgagc---atgaccggatcggcgctggtgccga	Protospacer
   *.**   **** *************.*****.

64. spacer 2.2|3483993|32|NC_021812|CRISPRCasFinder,CRT,PILER-CR matches to MN855803 (Bacteriophage sp. isolate 108, partial genome) position: , mismatch: 8, identity: 0.75

gcgaaatagtggggaaaaacccctggttaacc	CRISPR spacer
tttcaatattggggaaaaacccctcgttacct	Protospacer
 .  **** *************** **** *.

65. spacer 2.6|3484237|32|NC_021812|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016489 (Synechococcus sp. PCC 8807 plasmid unnamed6, complete sequence) position: , mismatch: 8, identity: 0.75

tatccacatatacccgcaatcatattcaagaa	CRISPR spacer
ggtaaatctaaacccgcaatcatattcaagag	Protospacer
 .*  *. ** ********************.

66. spacer 2.6|3484237|32|NC_021812|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016476 (Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.75

tatccacatatacccgcaatcatattcaagaa	CRISPR spacer
ggtaaatctaaacccgcaatcatattcaagag	Protospacer
 .*  *. ** ********************.

67. spacer 2.15|3484782|32|NC_021812|PILER-CR matches to NZ_CP016179 (Vibrio breoganii strain FF50 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ggtaatttctcatctaacagcct-----gtacgcctc	CRISPR spacer
ggtaatttcgcatcaaacagccttattagtat-----	Protospacer
********* **** ********     ***.

68. spacer 2.19|3485026|32|NC_021812|PILER-CR matches to AP013976 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C7-MedDCM-OCT-S26-C28, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 8, identity: 0.75

cgttgcgtcaggttgatccagtgcgtcagcgg	CRISPR spacer
agttgcgccagcttgatccagtgctgatgcgt	Protospacer
 ******.*** ************    ***

69. spacer 2.19|3485026|32|NC_021812|PILER-CR matches to JX536274 (Uncultured Mediterranean phage MEDS5 group fosmid MedDCM-OCT-S15-C5, complete sequence) position: , mismatch: 8, identity: 0.75

cgttgcgtcaggttgatccagtgcgtcagcgg	CRISPR spacer
agttgcgccagcttgatccagtgctgatgcgt	Protospacer
 ******.*** ************    ***

70. spacer 2.24|3485331|32|NC_021812|PILER-CR matches to NZ_CP025013 (Rhizobium leguminosarum strain Norway plasmid pRLN1, complete sequence) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tctcggtctcggtctcggtctcgacgacgctt	Protospacer
***********************.....* .

71. spacer 2.24|3485331|32|NC_021812|PILER-CR matches to NC_008269 (Rhodococcus jostii RHA1 plasmid pRHL1, complete sequence) position: , mismatch: 8, identity: 0.75

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
actgggtctgggtctcggtctcggtctcggtt------	Protospacer
      *** *********************

72. spacer 2.24|3485331|32|NC_021812|PILER-CR matches to JQ807255 (Environmental Halophage eHP-36, partial genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
catcggtctcggtctcggtctcggttccagtg	Protospacer
. ***********************  ....*

73. spacer 2.24|3485331|32|NC_021812|PILER-CR matches to MH509446 (Gordonia phage DelRio, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
actccgtctcggtttcggtctcggtcgcggtc	Protospacer
 *** ********.*********** *.*..

74. spacer 2.24|3485331|32|NC_021812|PILER-CR matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
cctcggtctcggcctcggcctcggtctcggcc	Protospacer
.***********.*****.******  .*.*

75. spacer 2.24|3485331|32|NC_021812|PILER-CR matches to MK359319 (Gordonia phage Parada, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
actccgtctcggtttcggtctcggtcgaggtc	Protospacer
 *** ********.*********** * *..

76. spacer 2.24|3485331|32|NC_021812|PILER-CR matches to MK359319 (Gordonia phage Parada, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tttcggtctcggtcgaggtctcggtgccctcg	Protospacer
*.************  *********. .  **

77. spacer 2.24|3485331|32|NC_021812|PILER-CR matches to MK376958 (Gordonia phage Brylie, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
actccgtctcggtttcggtctcggtcgaggtc	Protospacer
 *** ********.*********** * *..

78. spacer 2.24|3485331|32|NC_021812|PILER-CR matches to MK376958 (Gordonia phage Brylie, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tttcggtctcggtcgaggtctcggtgccctcg	Protospacer
*.************  *********. .  **

79. spacer 2.24|3485331|32|NC_021812|PILER-CR matches to MH399781 (Gordonia phage Nadeem, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
actccgtctcggtttcggtctcggtcgaggtc	Protospacer
 *** ********.*********** * *..

80. spacer 2.24|3485331|32|NC_021812|PILER-CR matches to MH399781 (Gordonia phage Nadeem, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tttcggtctcggtcgaggtctcggtgccctcg	Protospacer
*.************  *********. .  **

81. spacer 2.24|3485331|32|NC_021812|PILER-CR matches to MK967392 (Gordonia phage GrandSlam, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
actccgtctcggtttcggtctcggtcgaggtc	Protospacer
 *** ********.*********** * *..

82. spacer 2.24|3485331|32|NC_021812|PILER-CR matches to MK967392 (Gordonia phage GrandSlam, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tttcggtctcggtcgaggtctcggtgccctcg	Protospacer
*.************  *********. .  **

83. spacer 2.24|3485331|32|NC_021812|PILER-CR matches to MK279893 (Gordonia phage WheatThin, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
actccgtctcggtttcggtctcggtcgaggtc	Protospacer
 *** ********.*********** * *..

84. spacer 2.24|3485331|32|NC_021812|PILER-CR matches to MK279893 (Gordonia phage WheatThin, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tttcggtctcggtcgaggtctcggtgccctcg	Protospacer
*.************  *********. .  **

85. spacer 2.24|3485331|32|NC_021812|PILER-CR matches to MT701595 (Streptomyces phage Shaeky, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
cctcggcctcggcctcggtctcggtgtcctcg	Protospacer
.*****.*****.************. .  **

86. spacer 2.24|3485331|32|NC_021812|PILER-CR matches to NC_031247 (Gordonia phage BetterKatz, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
actccgtctcggtttcggtctcggtcgaggtc	Protospacer
 *** ********.*********** * *..

87. spacer 2.24|3485331|32|NC_021812|PILER-CR matches to NC_031247 (Gordonia phage BetterKatz, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tttcggtctcggtcgaggtctcggtgccttcg	Protospacer
*.************  *********. .  **

88. spacer 2.24|3485331|32|NC_021812|PILER-CR matches to MK305885 (Gordonia phage Mulch, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
actccgtctcggtttcggtctcggtcgaggtc	Protospacer
 *** ********.*********** * *..

89. spacer 2.24|3485331|32|NC_021812|PILER-CR matches to MK305885 (Gordonia phage Mulch, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tttcggtctcggtcgaggtctcggtgccctcg	Protospacer
*.************  *********. .  **

90. spacer 2.24|3485331|32|NC_021812|PILER-CR matches to NZ_CP014599 (Yangia sp. CCB-MM3 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attccgtctcggtctcggtcttggtgctgtag	Protospacer
 .** ****************.***. **  *

91. spacer 2.24|3485331|32|NC_021812|PILER-CR matches to MG269973 (TM7 phage DolZOral124_53_65, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg-----	CRISPR spacer
gctcggtctcggtttcggtttcg-----gacgcttgt	Protospacer
 ************.*****.***     ****

92. spacer 2.25|3485392|32|NC_021812|PILER-CR matches to NC_014754 (Sulfuricurvum kujiense DSM 16994 plasmid pSULKU01, complete sequence) position: , mismatch: 8, identity: 0.75

attttatttgacaaattggcggcatctcactg	CRISPR spacer
cctttttttgtcaaattggcggcatacggctg	Protospacer
 .*** **** ************** . .***

93. spacer 2.34|3484767|32|NC_021812|CRT,CRISPRCasFinder matches to NZ_CP016179 (Vibrio breoganii strain FF50 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ggtaatttctcatctaacagcct-----gtacgcctc	CRISPR spacer
ggtaatttcgcatcaaacagccttattagtat-----	Protospacer
********* **** ********     ***.

94. spacer 2.38|3485011|32|NC_021812|CRT,CRISPRCasFinder matches to AP013976 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C7-MedDCM-OCT-S26-C28, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 8, identity: 0.75

cgttgcgtcaggttgatccagtgcgtcagcgg	CRISPR spacer
agttgcgccagcttgatccagtgctgatgcgt	Protospacer
 ******.*** ************    ***

95. spacer 2.38|3485011|32|NC_021812|CRT,CRISPRCasFinder matches to JX536274 (Uncultured Mediterranean phage MEDS5 group fosmid MedDCM-OCT-S15-C5, complete sequence) position: , mismatch: 8, identity: 0.75

cgttgcgtcaggttgatccagtgcgtcagcgg	CRISPR spacer
agttgcgccagcttgatccagtgctgatgcgt	Protospacer
 ******.*** ************    ***

96. spacer 2.43|3485316|32|NC_021812|CRT,CRISPRCasFinder matches to NZ_CP025013 (Rhizobium leguminosarum strain Norway plasmid pRLN1, complete sequence) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tctcggtctcggtctcggtctcgacgacgctt	Protospacer
***********************.....* .

97. spacer 2.43|3485316|32|NC_021812|CRT,CRISPRCasFinder matches to NC_008269 (Rhodococcus jostii RHA1 plasmid pRHL1, complete sequence) position: , mismatch: 8, identity: 0.75

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
actgggtctgggtctcggtctcggtctcggtt------	Protospacer
      *** *********************

98. spacer 2.43|3485316|32|NC_021812|CRT,CRISPRCasFinder matches to JQ807255 (Environmental Halophage eHP-36, partial genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
catcggtctcggtctcggtctcggttccagtg	Protospacer
. ***********************  ....*

99. spacer 2.43|3485316|32|NC_021812|CRT,CRISPRCasFinder matches to MH509446 (Gordonia phage DelRio, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
actccgtctcggtttcggtctcggtcgcggtc	Protospacer
 *** ********.*********** *.*..

100. spacer 2.43|3485316|32|NC_021812|CRT,CRISPRCasFinder matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
cctcggtctcggcctcggcctcggtctcggcc	Protospacer
.***********.*****.******  .*.*

101. spacer 2.43|3485316|32|NC_021812|CRT,CRISPRCasFinder matches to MK359319 (Gordonia phage Parada, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
actccgtctcggtttcggtctcggtcgaggtc	Protospacer
 *** ********.*********** * *..

102. spacer 2.43|3485316|32|NC_021812|CRT,CRISPRCasFinder matches to MK359319 (Gordonia phage Parada, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tttcggtctcggtcgaggtctcggtgccctcg	Protospacer
*.************  *********. .  **

103. spacer 2.43|3485316|32|NC_021812|CRT,CRISPRCasFinder matches to MK376958 (Gordonia phage Brylie, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
actccgtctcggtttcggtctcggtcgaggtc	Protospacer
 *** ********.*********** * *..

104. spacer 2.43|3485316|32|NC_021812|CRT,CRISPRCasFinder matches to MK376958 (Gordonia phage Brylie, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tttcggtctcggtcgaggtctcggtgccctcg	Protospacer
*.************  *********. .  **

105. spacer 2.43|3485316|32|NC_021812|CRT,CRISPRCasFinder matches to MH399781 (Gordonia phage Nadeem, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
actccgtctcggtttcggtctcggtcgaggtc	Protospacer
 *** ********.*********** * *..

106. spacer 2.43|3485316|32|NC_021812|CRT,CRISPRCasFinder matches to MH399781 (Gordonia phage Nadeem, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tttcggtctcggtcgaggtctcggtgccctcg	Protospacer
*.************  *********. .  **

107. spacer 2.43|3485316|32|NC_021812|CRT,CRISPRCasFinder matches to MK967392 (Gordonia phage GrandSlam, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
actccgtctcggtttcggtctcggtcgaggtc	Protospacer
 *** ********.*********** * *..

108. spacer 2.43|3485316|32|NC_021812|CRT,CRISPRCasFinder matches to MK967392 (Gordonia phage GrandSlam, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tttcggtctcggtcgaggtctcggtgccctcg	Protospacer
*.************  *********. .  **

109. spacer 2.43|3485316|32|NC_021812|CRT,CRISPRCasFinder matches to MK279893 (Gordonia phage WheatThin, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
actccgtctcggtttcggtctcggtcgaggtc	Protospacer
 *** ********.*********** * *..

110. spacer 2.43|3485316|32|NC_021812|CRT,CRISPRCasFinder matches to MK279893 (Gordonia phage WheatThin, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tttcggtctcggtcgaggtctcggtgccctcg	Protospacer
*.************  *********. .  **

111. spacer 2.43|3485316|32|NC_021812|CRT,CRISPRCasFinder matches to MT701595 (Streptomyces phage Shaeky, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
cctcggcctcggcctcggtctcggtgtcctcg	Protospacer
.*****.*****.************. .  **

112. spacer 2.43|3485316|32|NC_021812|CRT,CRISPRCasFinder matches to NC_031247 (Gordonia phage BetterKatz, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
actccgtctcggtttcggtctcggtcgaggtc	Protospacer
 *** ********.*********** * *..

113. spacer 2.43|3485316|32|NC_021812|CRT,CRISPRCasFinder matches to NC_031247 (Gordonia phage BetterKatz, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tttcggtctcggtcgaggtctcggtgccttcg	Protospacer
*.************  *********. .  **

114. spacer 2.43|3485316|32|NC_021812|CRT,CRISPRCasFinder matches to MK305885 (Gordonia phage Mulch, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
actccgtctcggtttcggtctcggtcgaggtc	Protospacer
 *** ********.*********** * *..

115. spacer 2.43|3485316|32|NC_021812|CRT,CRISPRCasFinder matches to MK305885 (Gordonia phage Mulch, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tttcggtctcggtcgaggtctcggtgccctcg	Protospacer
*.************  *********. .  **

116. spacer 2.43|3485316|32|NC_021812|CRT,CRISPRCasFinder matches to NZ_CP014599 (Yangia sp. CCB-MM3 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attccgtctcggtctcggtcttggtgctgtag	Protospacer
 .** ****************.***. **  *

117. spacer 2.43|3485316|32|NC_021812|CRT,CRISPRCasFinder matches to MG269973 (TM7 phage DolZOral124_53_65, complete genome) position: , mismatch: 8, identity: 0.75

tctcggtctcggtctcggtctcggtagtgacg-----	CRISPR spacer
gctcggtctcggtttcggtttcg-----gacgcttgt	Protospacer
 ************.*****.***     ****

118. spacer 2.44|3485377|32|NC_021812|CRT,CRISPRCasFinder matches to NC_014754 (Sulfuricurvum kujiense DSM 16994 plasmid pSULKU01, complete sequence) position: , mismatch: 8, identity: 0.75

attttatttgacaaattggcggcatctcactg	CRISPR spacer
cctttttttgtcaaattggcggcatacggctg	Protospacer
 .*** **** ************** . .***

119. spacer 3.5|3502090|32|NC_021812|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP028348 (Novosphingobium sp. THN1 plasmid pTHN, complete sequence) position: , mismatch: 8, identity: 0.75

-gtcgcgttcgttgccggtatagaccagcgtca	CRISPR spacer
cagcggatcc-ttgccggtatagaccagcgtat	Protospacer
 . ** .*.* ********************

120. spacer 3.5|3502090|32|NC_021812|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP014128 (Pantoea vagans strain FDAARGOS_160 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.75

gtcgcgttcgttgccggtatagaccagcgtca	CRISPR spacer
gaattttacgttgccggtgtagaccagtgtca	Protospacer
*   . * **********.********.****

121. spacer 3.5|3502090|32|NC_021812|CRISPRCasFinder,CRT,PILER-CR matches to NC_014561 (Pantoea vagans C9-1 plasmid pPag1, complete sequence) position: , mismatch: 8, identity: 0.75

gtcgcgttcgttgccggtatagaccagcgtca	CRISPR spacer
gaattttacgttgccggtgtagaccagtgtca	Protospacer
*   . * **********.********.****

122. spacer 3.5|3502090|32|NC_021812|CRISPRCasFinder,CRT,PILER-CR matches to NC_010553 (Burkholderia ambifaria MC40-6 plasmid pBMC401, complete sequence) position: , mismatch: 8, identity: 0.75

gtcgcgttcgttgccggtatagaccagcgtca	CRISPR spacer
gatccggacgttgccggtattgaacagcgtcc	Protospacer
* . **  ************ ** *******

123. spacer 3.7|3502212|32|NC_021812|CRISPRCasFinder,CRT,PILER-CR matches to LQ277707 (Sequence 2 from Patent WO2016071503) position: , mismatch: 8, identity: 0.75

----gctcatgtcaaacgccatcagcgttccggcat	CRISPR spacer
aaaggct----gcaaacgccaatagcgttccggcaa	Protospacer
    ***     ********* .************

124. spacer 3.7|3502212|32|NC_021812|CRISPRCasFinder,CRT,PILER-CR matches to LZ998055 (JP 2017534684-A/2: Phage Therapy) position: , mismatch: 8, identity: 0.75

----gctcatgtcaaacgccatcagcgttccggcat	CRISPR spacer
aaaggct----gcaaacgccaatagcgttccggcaa	Protospacer
    ***     ********* .************

125. spacer 3.8|3502273|32|NC_021812|CRISPRCasFinder,CRT,PILER-CR matches to CP001770 (Spirosoma linguale DSM 74 plasmid pSLIN01, complete sequence) position: , mismatch: 8, identity: 0.75

aatcgccagcctcggaaatattccatcctccg	CRISPR spacer
ggttgccagccccggaagtattccatctccca	Protospacer
..*.*******.*****.*********..**.

126. spacer 3.18|3502883|32|NC_021812|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP014942 (Rhodococcus sp. BH4 plasmid, complete sequence) position: , mismatch: 8, identity: 0.75

taatggccacagtaagtcaaacggttctggaa	CRISPR spacer
cggtggccacagtaaggcacacggttcggcag	Protospacer
...************* ** ******* * *.

127. spacer 2.11|3484538|32|NC_021812|PILER-CR matches to MK448228 (Klebsiella phage ST15-VIM1phi2.1, complete genome) position: , mismatch: 9, identity: 0.719

ccagaaagtgccggtagtgcctgatgaacgac	CRISPR spacer
gcatccagcgccggtagtgccggatgaactca	Protospacer
 **   **.************ *******

128. spacer 2.18|3484965|32|NC_021812|PILER-CR matches to MT162468 (Synechococcus phage S-H25, complete genome) position: , mismatch: 9, identity: 0.719

tcccattcaccaacaacaatatcgccctgcaa----	CRISPR spacer
ccccaatcaccaacaataatatcgt----cagtgtt	Protospacer
.**** **********.*******.    **.

129. spacer 2.20|3485087|32|NC_021812|PILER-CR matches to NZ_CP050083 (Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b3, complete sequence) position: , mismatch: 9, identity: 0.719

tgatgaaatcgtcaataaaattattggcgcgc	CRISPR spacer
aaattggatcgtcaatgaatttattggcgctg	Protospacer
 .** ..*********.** **********

130. spacer 2.24|3485331|32|NC_021812|PILER-CR matches to NZ_CP028537 (Enterobacter hormaechei strain SCEH020042 plasmid pQnrB4_020042, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

131. spacer 2.24|3485331|32|NC_021812|PILER-CR matches to NZ_AP023191 (Escherichia coli strain TUM18530 plasmid pMTY18530-1_lncHI2, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

132. spacer 2.24|3485331|32|NC_021812|PILER-CR matches to MN539017 (Salmonella sp. strain PJM1 plasmid pPJM1, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

133. spacer 2.24|3485331|32|NC_021812|PILER-CR matches to MN539018 (Salmonella sp. strain OYZ4 plasmid pOYZ4, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

134. spacer 2.24|3485331|32|NC_021812|PILER-CR matches to MT077888 (Escherichia coli plasmid p65, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

135. spacer 2.24|3485331|32|NC_021812|PILER-CR matches to NC_009838 (Escherichia coli APEC O1 plasmid pAPEC-O1-R, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

136. spacer 2.24|3485331|32|NC_021812|PILER-CR matches to NZ_CP044306 (Escherichia coli strain C27A plasmid pC27A-CTX-M-55, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

137. spacer 2.24|3485331|32|NC_021812|PILER-CR matches to NZ_CP039170 (Salmonella enterica subsp. enterica serovar Goldcoast strain Sal-5364 plasmid pSal-5364, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

138. spacer 2.24|3485331|32|NC_021812|PILER-CR matches to CP048299 (Salmonella enterica subsp. enterica serovar Schwarzengrund strain WAPHL_SAL-A00527 plasmid pN1566-2, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

139. spacer 2.24|3485331|32|NC_021812|PILER-CR matches to CP048303 (Salmonella enterica subsp. enterica serovar Schwarzengrund strain WAPHL-SAL-A00375 plasmid p28945-2, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

140. spacer 2.24|3485331|32|NC_021812|PILER-CR matches to NZ_CP037959 (Salmonella enterica subsp. enterica serovar Goldcoast strain R18.0877 plasmid pR18.0877_278k, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

141. spacer 2.24|3485331|32|NC_021812|PILER-CR matches to NZ_CP039861 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014880 plasmid p16-6773.1, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

142. spacer 2.24|3485331|32|NC_021812|PILER-CR matches to NZ_CP048776 (Salmonella enterica subsp. enterica serovar Agona strain SG17-135 plasmid pSG17-135-HI2, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

143. spacer 2.24|3485331|32|NC_021812|PILER-CR matches to NC_019114 (Salmonella enterica subsp. enterica serovar Heidelberg plasmid pSH111_227, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

144. spacer 2.24|3485331|32|NC_021812|PILER-CR matches to NZ_AP023198 (Escherichia coli strain TUM18780 plasmid pMTY18780-1_lncHI2, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

145. spacer 2.24|3485331|32|NC_021812|PILER-CR matches to NZ_CP043223 (Salmonella enterica subsp. enterica serovar Bredeney strain SA20114778WT plasmid pET1.1-IncH, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

146. spacer 2.24|3485331|32|NC_021812|PILER-CR matches to NZ_CP043223 (Salmonella enterica subsp. enterica serovar Bredeney strain SA20114778WT plasmid pET1.1-IncH, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

147. spacer 2.24|3485331|32|NC_021812|PILER-CR matches to NZ_CP027411 (Salmonella enterica strain FDAARGOS_319 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

148. spacer 2.24|3485331|32|NC_021812|PILER-CR matches to JQ807227 (Environmental Halophage eHP-6, partial genome) position: , mismatch: 9, identity: 0.719

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
catcggtctcggtctcggtcccggttccagtg	Protospacer
. ******************.****  ....*

149. spacer 2.24|3485331|32|NC_021812|PILER-CR matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 9, identity: 0.719

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
cctcggcctcggtctcggcctcggcgtcggtg	Protospacer
.*****.***********.*****.. .*..*

150. spacer 2.24|3485331|32|NC_021812|PILER-CR matches to NC_019201 (Streptomyces sp. x4(2010) plasmid pTSC1, complete sequence) position: , mismatch: 9, identity: 0.719

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
gctcggtctcagtctcggtctcagtctcgcgt	Protospacer
 *********.***********.**  .*

151. spacer 2.25|3485392|32|NC_021812|PILER-CR matches to NC_013857 (Azospirillum sp. B510 plasmid pAB510c, complete sequence) position: , mismatch: 9, identity: 0.719

attttatttgacaaattggcggcatctcactg	CRISPR spacer
attctatttgacacattggcggcgccgagcca	Protospacer
***.********* *********..*  .*..

152. spacer 2.27|3485514|32|NC_021812|PILER-CR matches to NZ_CP043846 (Staphylococcus epidermidis strain ATCC 12228 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

actgcttatcattgattttattgatttttccc	CRISPR spacer
cttttttagctttgattttattgatttttaga	Protospacer
 .* .*** * ******************

153. spacer 2.27|3485514|32|NC_021812|PILER-CR matches to NZ_CP034117 (Staphylococcus epidermidis strain CDC121 plasmid pSTA482, complete sequence) position: , mismatch: 9, identity: 0.719

actgcttatcattgattttattgatttttccc	CRISPR spacer
cttttttagctttgattttattgatttttaga	Protospacer
 .* .*** * ******************

154. spacer 2.27|3485514|32|NC_021812|PILER-CR matches to NZ_CP034114 (Staphylococcus epidermidis strain CDC120 plasmid pSTA493, complete sequence) position: , mismatch: 9, identity: 0.719

actgcttatcattgattttattgatttttccc	CRISPR spacer
cttttttagctttgattttattgatttttaga	Protospacer
 .* .*** * ******************

155. spacer 2.27|3485514|32|NC_021812|PILER-CR matches to NZ_CP017904 (Vibrio alginolyticus strain K05K4 plasmid pL289, complete sequence) position: , mismatch: 9, identity: 0.719

actgcttatcattgattttattgatttttccc	CRISPR spacer
gttgcttaccattgattatattgataccagcc	Protospacer
..******.******** ******* ..  **

156. spacer 2.27|3485514|32|NC_021812|PILER-CR matches to NZ_CP017901 (Vibrio alginolyticus strain K04M5 plasmid pL294, complete sequence) position: , mismatch: 9, identity: 0.719

actgcttatcattgattttattgatttttccc	CRISPR spacer
gttgcttaccattgattatattgataccagcc	Protospacer
..******.******** ******* ..  **

157. spacer 2.27|3485514|32|NC_021812|PILER-CR matches to NZ_CP026804 (Shigella flexneri strain 89-141 plasmid unnamed1) position: , mismatch: 9, identity: 0.719

actgcttatcattgattttattgatttttccc	CRISPR spacer
tgtaataatcaataattttattgatttttcga	Protospacer
  *. * **** *.****************

158. spacer 2.27|3485514|32|NC_021812|PILER-CR matches to NZ_CP017909 (Vibrio alginolyticus strain K06K5 plasmid pL291, complete sequence) position: , mismatch: 9, identity: 0.719

actgcttatcattgattttattgatttttccc	CRISPR spacer
gttgcttaccattgattatattgataccagcc	Protospacer
..******.******** ******* ..  **

159. spacer 2.27|3485514|32|NC_021812|PILER-CR matches to NZ_CP017893 (Vibrio alginolyticus strain K04M1 plasmid pL280, complete sequence) position: , mismatch: 9, identity: 0.719

actgcttatcattgattttattgatttttccc	CRISPR spacer
gttgcttaccattgattatattgataccagcc	Protospacer
..******.******** ******* ..  **

160. spacer 2.27|3485514|32|NC_021812|PILER-CR matches to NZ_CP017898 (Vibrio alginolyticus isolate K04M3 plasmid pL294, complete sequence) position: , mismatch: 9, identity: 0.719

actgcttatcattgattttattgatttttccc	CRISPR spacer
gttgcttaccattgattatattgataccagcc	Protospacer
..******.******** ******* ..  **

161. spacer 2.30|3484523|32|NC_021812|CRT,CRISPRCasFinder matches to MK448228 (Klebsiella phage ST15-VIM1phi2.1, complete genome) position: , mismatch: 9, identity: 0.719

ccagaaagtgccggtagtgcctgatgaacgac	CRISPR spacer
gcatccagcgccggtagtgccggatgaactca	Protospacer
 **   **.************ *******

162. spacer 2.37|3484950|32|NC_021812|CRT,CRISPRCasFinder matches to MT162468 (Synechococcus phage S-H25, complete genome) position: , mismatch: 9, identity: 0.719

tcccattcaccaacaacaatatcgccctgcaa----	CRISPR spacer
ccccaatcaccaacaataatatcgt----cagtgtt	Protospacer
.**** **********.*******.    **.

163. spacer 2.39|3485072|32|NC_021812|CRT,CRISPRCasFinder matches to NZ_CP050083 (Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b3, complete sequence) position: , mismatch: 9, identity: 0.719

tgatgaaatcgtcaataaaattattggcgcgc	CRISPR spacer
aaattggatcgtcaatgaatttattggcgctg	Protospacer
 .** ..*********.** **********

164. spacer 2.43|3485316|32|NC_021812|CRT,CRISPRCasFinder matches to NZ_CP028537 (Enterobacter hormaechei strain SCEH020042 plasmid pQnrB4_020042, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

165. spacer 2.43|3485316|32|NC_021812|CRT,CRISPRCasFinder matches to NZ_AP023191 (Escherichia coli strain TUM18530 plasmid pMTY18530-1_lncHI2, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

166. spacer 2.43|3485316|32|NC_021812|CRT,CRISPRCasFinder matches to MN539017 (Salmonella sp. strain PJM1 plasmid pPJM1, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

167. spacer 2.43|3485316|32|NC_021812|CRT,CRISPRCasFinder matches to MN539018 (Salmonella sp. strain OYZ4 plasmid pOYZ4, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

168. spacer 2.43|3485316|32|NC_021812|CRT,CRISPRCasFinder matches to MT077888 (Escherichia coli plasmid p65, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

169. spacer 2.43|3485316|32|NC_021812|CRT,CRISPRCasFinder matches to NC_009838 (Escherichia coli APEC O1 plasmid pAPEC-O1-R, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

170. spacer 2.43|3485316|32|NC_021812|CRT,CRISPRCasFinder matches to NZ_CP044306 (Escherichia coli strain C27A plasmid pC27A-CTX-M-55, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

171. spacer 2.43|3485316|32|NC_021812|CRT,CRISPRCasFinder matches to NZ_CP039170 (Salmonella enterica subsp. enterica serovar Goldcoast strain Sal-5364 plasmid pSal-5364, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

172. spacer 2.43|3485316|32|NC_021812|CRT,CRISPRCasFinder matches to CP048299 (Salmonella enterica subsp. enterica serovar Schwarzengrund strain WAPHL_SAL-A00527 plasmid pN1566-2, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

173. spacer 2.43|3485316|32|NC_021812|CRT,CRISPRCasFinder matches to CP048303 (Salmonella enterica subsp. enterica serovar Schwarzengrund strain WAPHL-SAL-A00375 plasmid p28945-2, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

174. spacer 2.43|3485316|32|NC_021812|CRT,CRISPRCasFinder matches to NZ_CP037959 (Salmonella enterica subsp. enterica serovar Goldcoast strain R18.0877 plasmid pR18.0877_278k, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

175. spacer 2.43|3485316|32|NC_021812|CRT,CRISPRCasFinder matches to NZ_CP039861 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014880 plasmid p16-6773.1, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

176. spacer 2.43|3485316|32|NC_021812|CRT,CRISPRCasFinder matches to NZ_CP048776 (Salmonella enterica subsp. enterica serovar Agona strain SG17-135 plasmid pSG17-135-HI2, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

177. spacer 2.43|3485316|32|NC_021812|CRT,CRISPRCasFinder matches to NC_019114 (Salmonella enterica subsp. enterica serovar Heidelberg plasmid pSH111_227, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

178. spacer 2.43|3485316|32|NC_021812|CRT,CRISPRCasFinder matches to NZ_AP023198 (Escherichia coli strain TUM18780 plasmid pMTY18780-1_lncHI2, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

179. spacer 2.43|3485316|32|NC_021812|CRT,CRISPRCasFinder matches to NZ_CP043223 (Salmonella enterica subsp. enterica serovar Bredeney strain SA20114778WT plasmid pET1.1-IncH, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

180. spacer 2.43|3485316|32|NC_021812|CRT,CRISPRCasFinder matches to NZ_CP043223 (Salmonella enterica subsp. enterica serovar Bredeney strain SA20114778WT plasmid pET1.1-IncH, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

181. spacer 2.43|3485316|32|NC_021812|CRT,CRISPRCasFinder matches to NZ_CP027411 (Salmonella enterica strain FDAARGOS_319 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
attcggtatcggtctcggtctcggtctcggat------	Protospacer
      * **********************

182. spacer 2.43|3485316|32|NC_021812|CRT,CRISPRCasFinder matches to JQ807227 (Environmental Halophage eHP-6, partial genome) position: , mismatch: 9, identity: 0.719

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
catcggtctcggtctcggtcccggttccagtg	Protospacer
. ******************.****  ....*

183. spacer 2.43|3485316|32|NC_021812|CRT,CRISPRCasFinder matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 9, identity: 0.719

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
cctcggcctcggtctcggcctcggcgtcggtg	Protospacer
.*****.***********.*****.. .*..*

184. spacer 2.43|3485316|32|NC_021812|CRT,CRISPRCasFinder matches to NC_019201 (Streptomyces sp. x4(2010) plasmid pTSC1, complete sequence) position: , mismatch: 9, identity: 0.719

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
gctcggtctcagtctcggtctcagtctcgcgt	Protospacer
 *********.***********.**  .*

185. spacer 2.44|3485377|32|NC_021812|CRT,CRISPRCasFinder matches to NC_013857 (Azospirillum sp. B510 plasmid pAB510c, complete sequence) position: , mismatch: 9, identity: 0.719

attttatttgacaaattggcggcatctcactg	CRISPR spacer
attctatttgacacattggcggcgccgagcca	Protospacer
***.********* *********..*  .*..

186. spacer 2.46|3485499|32|NC_021812|CRT,CRISPRCasFinder matches to NZ_CP043846 (Staphylococcus epidermidis strain ATCC 12228 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

actgcttatcattgattttattgatttttccc	CRISPR spacer
cttttttagctttgattttattgatttttaga	Protospacer
 .* .*** * ******************

187. spacer 2.46|3485499|32|NC_021812|CRT,CRISPRCasFinder matches to NZ_CP034117 (Staphylococcus epidermidis strain CDC121 plasmid pSTA482, complete sequence) position: , mismatch: 9, identity: 0.719

actgcttatcattgattttattgatttttccc	CRISPR spacer
cttttttagctttgattttattgatttttaga	Protospacer
 .* .*** * ******************

188. spacer 2.46|3485499|32|NC_021812|CRT,CRISPRCasFinder matches to NZ_CP034114 (Staphylococcus epidermidis strain CDC120 plasmid pSTA493, complete sequence) position: , mismatch: 9, identity: 0.719

actgcttatcattgattttattgatttttccc	CRISPR spacer
cttttttagctttgattttattgatttttaga	Protospacer
 .* .*** * ******************

189. spacer 2.46|3485499|32|NC_021812|CRT,CRISPRCasFinder matches to NZ_CP017904 (Vibrio alginolyticus strain K05K4 plasmid pL289, complete sequence) position: , mismatch: 9, identity: 0.719

actgcttatcattgattttattgatttttccc	CRISPR spacer
gttgcttaccattgattatattgataccagcc	Protospacer
..******.******** ******* ..  **

190. spacer 2.46|3485499|32|NC_021812|CRT,CRISPRCasFinder matches to NZ_CP017901 (Vibrio alginolyticus strain K04M5 plasmid pL294, complete sequence) position: , mismatch: 9, identity: 0.719

actgcttatcattgattttattgatttttccc	CRISPR spacer
gttgcttaccattgattatattgataccagcc	Protospacer
..******.******** ******* ..  **

191. spacer 2.46|3485499|32|NC_021812|CRT,CRISPRCasFinder matches to NZ_CP026804 (Shigella flexneri strain 89-141 plasmid unnamed1) position: , mismatch: 9, identity: 0.719

actgcttatcattgattttattgatttttccc	CRISPR spacer
tgtaataatcaataattttattgatttttcga	Protospacer
  *. * **** *.****************

192. spacer 2.46|3485499|32|NC_021812|CRT,CRISPRCasFinder matches to NZ_CP017909 (Vibrio alginolyticus strain K06K5 plasmid pL291, complete sequence) position: , mismatch: 9, identity: 0.719

actgcttatcattgattttattgatttttccc	CRISPR spacer
gttgcttaccattgattatattgataccagcc	Protospacer
..******.******** ******* ..  **

193. spacer 2.46|3485499|32|NC_021812|CRT,CRISPRCasFinder matches to NZ_CP017893 (Vibrio alginolyticus strain K04M1 plasmid pL280, complete sequence) position: , mismatch: 9, identity: 0.719

actgcttatcattgattttattgatttttccc	CRISPR spacer
gttgcttaccattgattatattgataccagcc	Protospacer
..******.******** ******* ..  **

194. spacer 2.46|3485499|32|NC_021812|CRT,CRISPRCasFinder matches to NZ_CP017898 (Vibrio alginolyticus isolate K04M3 plasmid pL294, complete sequence) position: , mismatch: 9, identity: 0.719

actgcttatcattgattttattgatttttccc	CRISPR spacer
gttgcttaccattgattatattgataccagcc	Protospacer
..******.******** ******* ..  **

195. spacer 3.5|3502090|32|NC_021812|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP045722 (Pantoea eucalypti strain LMG 24197 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

gtcgcgttcgttgccggtatagaccagcgtca	CRISPR spacer
aaacttgacgttgccggtatagatcagcgtca	Protospacer
.   .   ***************.********

196. spacer 3.5|3502090|32|NC_021812|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022519 (Pantoea vagans strain FBS135 plasmid pPant3, complete sequence) position: , mismatch: 9, identity: 0.719

gtcgcgttcgttgccggtatagaccagcgtca	CRISPR spacer
aaacttgacgttgccggtatagatcagcgtca	Protospacer
.   .   ***************.********

197. spacer 3.5|3502090|32|NC_021812|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP028351 (Pantoea vagans strain PV989 plasmid pPV989-167, complete sequence) position: , mismatch: 9, identity: 0.719

gtcgcgttcgttgccggtatagaccagcgtca	CRISPR spacer
aaattttacgttgccggtgtagaccagtgtca	Protospacer
.   . * **********.********.****

198. spacer 3.9|3502334|32|NC_021812|CRISPRCasFinder,CRT,PILER-CR matches to MN062720 (Microbacterium phage FuzzBuster, complete genome) position: , mismatch: 9, identity: 0.719

aggaactaaacagcctgaccgttgaggatctg	CRISPR spacer
tcctcctggacaggctgaccgttgacgatctg	Protospacer
     **..**** *********** ******

199. spacer 3.10|3502395|32|NC_021812|CRISPRCasFinder,CRT,PILER-CR matches to MN694645 (Marine virus AFVG_250M761, complete genome) position: , mismatch: 9, identity: 0.719

accggacaaatcttttttttcctgttcctgtt	CRISPR spacer
gcatcattaatcctttttttcctgttactgta	Protospacer
.*   *. ****.************* ****

200. spacer 3.13|3502578|32|NC_021812|CRISPRCasFinder,CRT,PILER-CR matches to DQ674738 (Aeromonas phage phiO18P, complete genome) position: , mismatch: 9, identity: 0.719

gggcactatgaacggatcggcgctgatgccgg	CRISPR spacer
cagtttgctgaactgctcggcgctgatgccgg	Protospacer
 .*. .  ***** * ****************

201. spacer 3.13|3502578|32|NC_021812|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP031166 (Euzebya sp. DY32-46 plasmid pEDY32-46I, complete sequence) position: , mismatch: 9, identity: 0.719

gggcactatgaacggatcggcgctgatgccgg	CRISPR spacer
cctgacggtgaaccggtcggcgctgatgccgc	Protospacer
    ** .***** *.***************

202. spacer 3.13|3502578|32|NC_021812|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022367 (Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence) position: , mismatch: 9, identity: 0.719

gggcactatgaacggatcggcgctgatgccgg	CRISPR spacer
cagggcgtcgaactgatcggcgctcatgccgg	Protospacer
 .* .*  .**** ********** *******

203. spacer 3.14|3502639|32|NC_021812|CRISPRCasFinder,CRT,PILER-CR matches to MN693046 (Marine virus AFVG_25M413, complete genome) position: , mismatch: 9, identity: 0.719

ggtaaagccacaccattttttattgacctcgc	CRISPR spacer
tctgaaaccacaccattttttgttgaccctaa	Protospacer
  *.**.**************.******...

204. spacer 3.14|3502639|32|NC_021812|CRISPRCasFinder,CRT,PILER-CR matches to MN693008 (Marine virus AFVG_117M9, complete genome) position: , mismatch: 9, identity: 0.719

ggtaaagccacaccattttttattgacctcgc	CRISPR spacer
tctgaaaccacaccattttttgttgaccctaa	Protospacer
  *.**.**************.******...

205. spacer 3.17|3502822|32|NC_021812|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021372 (Rhizobium sp. ACO-34A plasmid pRACO34Ad, complete sequence) position: , mismatch: 9, identity: 0.719

tcgacgtggacgaggagttactcaaccgctgc	CRISPR spacer
gttcagtggacgaggagttcctcacccgcacc	Protospacer
 .   ************** **** ****  *

206. spacer 3.17|3502822|32|NC_021812|CRISPRCasFinder,CRT,PILER-CR matches to AM749121 (Streptococcus phage M102 complete genome) position: , mismatch: 9, identity: 0.719

tcgacgtggacgaggagttactcaaccgctgc	CRISPR spacer
ttgggctggaccaggagttactccaccgcctt	Protospacer
*.*.  ***** *********** *****. .

207. spacer 3.17|3502822|32|NC_021812|CRISPRCasFinder,CRT,PILER-CR matches to NC_012884 (Streptococcus phage M102, complete genome) position: , mismatch: 9, identity: 0.719

tcgacgtggacgaggagttactcaaccgctgc	CRISPR spacer
ttgggctggaccaggagttactccaccgcctt	Protospacer
*.*.  ***** *********** *****. .

208. spacer 2.1|3483932|32|NC_021812|CRISPRCasFinder,CRT matches to NC_016113 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence) position: , mismatch: 10, identity: 0.688

ttttcagcccttgtcgactgcggaacgcccct	CRISPR spacer
tccctcaccctcgtcgactgcggaccgcccgg	Protospacer
*.... .****.************ *****

209. spacer 2.1|3483932|32|NC_021812|CRISPRCasFinder,CRT matches to NC_017585 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence) position: , mismatch: 10, identity: 0.688

ttttcagcccttgtcgactgcggaacgcccct	CRISPR spacer
tccctcaccctcgtcgactgcggaccgcccgg	Protospacer
*.... .****.************ *****

210. spacer 2.13|3484660|32|NC_021812|PILER-CR matches to NC_024995 (Gluconacetobacter europaeus plasmid pGE3 genomic DNA, complete sequence, strain: KGMA0119) position: , mismatch: 10, identity: 0.688

accgttccggtatgatcgaagatacggcaaac	CRISPR spacer
tcccttccgatatgatcgaagatagtcctgtt	Protospacer
 ** *****.**************   * . .

211. spacer 2.18|3484965|32|NC_021812|PILER-CR matches to LN681539 (Clostridium phage phiCD505, complete genome) position: , mismatch: 10, identity: 0.688

tcccattcaccaacaacaatatcgccctgcaa	CRISPR spacer
tcccattcctcaacaacaatatcattttcact	Protospacer
******** .*************....*

212. spacer 2.18|3484965|32|NC_021812|PILER-CR matches to JX145341 (Clostridium phage phiMMP02, complete genome) position: , mismatch: 10, identity: 0.688

tcccattcaccaacaacaatatcgccctgcaa	CRISPR spacer
tcccattcctcaacaacaatatcattttcact	Protospacer
******** .*************....*

213. spacer 2.18|3484965|32|NC_021812|PILER-CR matches to NC_011398 (Clostridium phage phiCD27, complete genome) position: , mismatch: 10, identity: 0.688

tcccattcaccaacaacaatatcgccctgcaa	CRISPR spacer
tcccattcctcaacaacaatatcattttcact	Protospacer
******** .*************....*

214. spacer 2.18|3484965|32|NC_021812|PILER-CR matches to NC_048642 (Clostridium phage CDKM9, complete genome) position: , mismatch: 10, identity: 0.688

tcccattcaccaacaacaatatcgccctgcaa	CRISPR spacer
tcccattcctcaacaacaatatcattttcact	Protospacer
******** .*************....*

215. spacer 2.18|3484965|32|NC_021812|PILER-CR matches to KX228400 (Clostridium phage CDKM15, complete genome) position: , mismatch: 10, identity: 0.688

tcccattcaccaacaacaatatcgccctgcaa	CRISPR spacer
tcccattcctcaacaacaatatcattttcact	Protospacer
******** .*************....*

216. spacer 2.19|3485026|32|NC_021812|PILER-CR matches to NZ_CP020539 (Sphingobium herbicidovorans strain MH plasmid pMSHV, complete sequence) position: , mismatch: 10, identity: 0.688

cgttgcgtcaggttgatccagtgcgtcagcgg	CRISPR spacer
tcaaacgccaggttgatcaagtgcgtcagatt	Protospacer
.   .**.********** **********

217. spacer 2.20|3485087|32|NC_021812|PILER-CR matches to NZ_CP012188 (Lactobacillus paracasei strain CAUH35 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

tgatgaaatcgtcaataaaattattggcgcgc	CRISPR spacer
tgatgaaattgtcaaaaaaattaagcagcttc	Protospacer
*********.***** *******   .  . *

218. spacer 2.24|3485331|32|NC_021812|PILER-CR matches to NZ_KY689633 (Escherichia coli strain 100R plasmid p100R, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

219. spacer 2.24|3485331|32|NC_021812|PILER-CR matches to NZ_KY689632 (Escherichia coli strain 19-M12 plasmid p19M12, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

220. spacer 2.24|3485331|32|NC_021812|PILER-CR matches to NZ_CP045446 (Salmonella enterica subsp. enterica serovar Schwarzengrund strain 9355 plasmid p280_9355, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

221. spacer 2.24|3485331|32|NC_021812|PILER-CR matches to NZ_KU743384 (Escherichia coli strain SA26 plasmid pSA26-MCR-1, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

222. spacer 2.24|3485331|32|NC_021812|PILER-CR matches to NZ_KU254578 (Escherichia coli strain YD786 plasmid pYD786-1, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

223. spacer 2.24|3485331|32|NC_021812|PILER-CR matches to NZ_KX129782 (Escherichia coli strain S38 plasmid pS38, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

224. spacer 2.24|3485331|32|NC_021812|PILER-CR matches to NZ_CP015833 (Escherichia coli O157 strain 180-PT54 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

225. spacer 2.24|3485331|32|NC_021812|PILER-CR matches to LT221036 (Yersinia pseudotuberculosis strain Yps.F1, plasmid pYps.F1 complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

226. spacer 2.24|3485331|32|NC_021812|PILER-CR matches to CP019195 (Salmonella enterica subsp. enterica serovar Senftenberg str. ATCC 43845 plasmid pATCC43845, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

227. spacer 2.24|3485331|32|NC_021812|PILER-CR matches to NZ_CP045449 (Salmonella enterica subsp. enterica serovar Schwarzengrund strain 12888 plasmid p280_12888, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

228. spacer 2.24|3485331|32|NC_021812|PILER-CR matches to NZ_CP015096 (Pelagibaca abyssi strain JLT2014 plasmid pPABY8, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
cctcggtctcgtcctcggtctcggcctcggtc------	Protospacer
      ***** .***********.******

229. spacer 2.24|3485331|32|NC_021812|PILER-CR matches to MN732922 (Escherichia coli strain 49K plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

230. spacer 2.24|3485331|32|NC_021812|PILER-CR matches to NZ_CP020493 (Salmonella enterica subsp. enterica strain 08-00436 plasmid pSE08-00436-1, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

231. spacer 2.24|3485331|32|NC_021812|PILER-CR matches to CP031284 (Escherichia fergusonii strain 40A plasmid p280_40A, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

232. spacer 2.24|3485331|32|NC_021812|PILER-CR matches to CP042895 (Escherichia coli strain CFSAN061772 plasmid pCFSAN061772_02, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

233. spacer 2.24|3485331|32|NC_021812|PILER-CR matches to NZ_CP022735 (Escherichia coli strain SA186 plasmid pSA186_MCR1, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

234. spacer 2.24|3485331|32|NC_021812|PILER-CR matches to CP042898 (Escherichia coli strain CFSAN061771 plasmid pCFSAN061771_02, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

235. spacer 2.24|3485331|32|NC_021812|PILER-CR matches to NZ_CP022165 (Escherichia coli strain M160133 plasmid pM160133_p1, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

236. spacer 2.24|3485331|32|NC_021812|PILER-CR matches to NZ_CP012931 (Salmonella enterica subsp. enterica serovar Heidelberg strain N13-01290 plasmid pN13-01290_23, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

237. spacer 2.24|3485331|32|NC_021812|PILER-CR matches to NZ_CP023143 (Escherichia coli strain CFSAN061770 plasmid pEGY1-MCR-1, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

238. spacer 2.24|3485331|32|NC_021812|PILER-CR matches to NZ_CP026936 (Escherichia coli strain CFS3292 plasmid pCFS3292-1, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

239. spacer 2.24|3485331|32|NC_021812|PILER-CR matches to NZ_CP025402 (Escherichia coli strain MS8345 plasmid pMS8345A, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

240. spacer 2.24|3485331|32|NC_021812|PILER-CR matches to NZ_CP026933 (Escherichia coli strain CFS3273 plasmid pCFS3273-1, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

241. spacer 2.24|3485331|32|NC_021812|PILER-CR matches to NZ_MH924589 (Escherichia coli strain RDB9 plasmid pRDB9, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

242. spacer 2.24|3485331|32|NC_021812|PILER-CR matches to NZ_MH208235 (Escherichia coli strain APECA2 plasmid pJMA2, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

243. spacer 2.24|3485331|32|NC_021812|PILER-CR matches to NZ_MK169211 (Escherichia coli strain DUK14-2 plasmid pMOO-32, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

244. spacer 2.24|3485331|32|NC_021812|PILER-CR matches to NZ_CP016838 (Salmonella enterica subsp. enterica serovar Senftenberg strain 775W (ATCC 43845) plasmid pSSE-ATCC-43845, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

245. spacer 2.24|3485331|32|NC_021812|PILER-CR matches to NZ_CP045074 (Paracoccus kondratievae strain BJQ0001 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
cgcgcagcccggtctcggtctcggttgtggcg	Protospacer
. .  . *.**************** ***.**

246. spacer 2.27|3485514|32|NC_021812|PILER-CR matches to NZ_CP044540 (Borrelia sp. CA690 plasmid lp17, complete sequence) position: , mismatch: 10, identity: 0.688

actgcttatcattgattttattgatttttccc	CRISPR spacer
cattaaagtcatttattttattggtttttccg	Protospacer
  *    .***** *********.*******

247. spacer 2.27|3485514|32|NC_021812|PILER-CR matches to NZ_LR215005 (Mycoplasma conjunctivae strain NCTC10147 plasmid 9) position: , mismatch: 10, identity: 0.688

actgcttatcattgattttattgatttttccc	CRISPR spacer
ttctttcatcattgattttcttgatttctcaa	Protospacer
 .. .*.************ *******.**

248. spacer 2.32|3484645|32|NC_021812|CRT,CRISPRCasFinder matches to NC_024995 (Gluconacetobacter europaeus plasmid pGE3 genomic DNA, complete sequence, strain: KGMA0119) position: , mismatch: 10, identity: 0.688

accgttccggtatgatcgaagatacggcaaac	CRISPR spacer
tcccttccgatatgatcgaagatagtcctgtt	Protospacer
 ** *****.**************   * . .

249. spacer 2.37|3484950|32|NC_021812|CRT,CRISPRCasFinder matches to LN681539 (Clostridium phage phiCD505, complete genome) position: , mismatch: 10, identity: 0.688

tcccattcaccaacaacaatatcgccctgcaa	CRISPR spacer
tcccattcctcaacaacaatatcattttcact	Protospacer
******** .*************....*

250. spacer 2.37|3484950|32|NC_021812|CRT,CRISPRCasFinder matches to JX145341 (Clostridium phage phiMMP02, complete genome) position: , mismatch: 10, identity: 0.688

tcccattcaccaacaacaatatcgccctgcaa	CRISPR spacer
tcccattcctcaacaacaatatcattttcact	Protospacer
******** .*************....*

251. spacer 2.37|3484950|32|NC_021812|CRT,CRISPRCasFinder matches to NC_011398 (Clostridium phage phiCD27, complete genome) position: , mismatch: 10, identity: 0.688

tcccattcaccaacaacaatatcgccctgcaa	CRISPR spacer
tcccattcctcaacaacaatatcattttcact	Protospacer
******** .*************....*

252. spacer 2.37|3484950|32|NC_021812|CRT,CRISPRCasFinder matches to NC_048642 (Clostridium phage CDKM9, complete genome) position: , mismatch: 10, identity: 0.688

tcccattcaccaacaacaatatcgccctgcaa	CRISPR spacer
tcccattcctcaacaacaatatcattttcact	Protospacer
******** .*************....*

253. spacer 2.37|3484950|32|NC_021812|CRT,CRISPRCasFinder matches to KX228400 (Clostridium phage CDKM15, complete genome) position: , mismatch: 10, identity: 0.688

tcccattcaccaacaacaatatcgccctgcaa	CRISPR spacer
tcccattcctcaacaacaatatcattttcact	Protospacer
******** .*************....*

254. spacer 2.38|3485011|32|NC_021812|CRT,CRISPRCasFinder matches to NZ_CP020539 (Sphingobium herbicidovorans strain MH plasmid pMSHV, complete sequence) position: , mismatch: 10, identity: 0.688

cgttgcgtcaggttgatccagtgcgtcagcgg	CRISPR spacer
tcaaacgccaggttgatcaagtgcgtcagatt	Protospacer
.   .**.********** **********

255. spacer 2.39|3485072|32|NC_021812|CRT,CRISPRCasFinder matches to NZ_CP012188 (Lactobacillus paracasei strain CAUH35 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

tgatgaaatcgtcaataaaattattggcgcgc	CRISPR spacer
tgatgaaattgtcaaaaaaattaagcagcttc	Protospacer
*********.***** *******   .  . *

256. spacer 2.43|3485316|32|NC_021812|CRT,CRISPRCasFinder matches to NZ_KY689633 (Escherichia coli strain 100R plasmid p100R, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

257. spacer 2.43|3485316|32|NC_021812|CRT,CRISPRCasFinder matches to NZ_KY689632 (Escherichia coli strain 19-M12 plasmid p19M12, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

258. spacer 2.43|3485316|32|NC_021812|CRT,CRISPRCasFinder matches to NZ_CP045446 (Salmonella enterica subsp. enterica serovar Schwarzengrund strain 9355 plasmid p280_9355, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

259. spacer 2.43|3485316|32|NC_021812|CRT,CRISPRCasFinder matches to NZ_KU743384 (Escherichia coli strain SA26 plasmid pSA26-MCR-1, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

260. spacer 2.43|3485316|32|NC_021812|CRT,CRISPRCasFinder matches to NZ_KU254578 (Escherichia coli strain YD786 plasmid pYD786-1, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

261. spacer 2.43|3485316|32|NC_021812|CRT,CRISPRCasFinder matches to NZ_KX129782 (Escherichia coli strain S38 plasmid pS38, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

262. spacer 2.43|3485316|32|NC_021812|CRT,CRISPRCasFinder matches to NZ_CP015833 (Escherichia coli O157 strain 180-PT54 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

263. spacer 2.43|3485316|32|NC_021812|CRT,CRISPRCasFinder matches to LT221036 (Yersinia pseudotuberculosis strain Yps.F1, plasmid pYps.F1 complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

264. spacer 2.43|3485316|32|NC_021812|CRT,CRISPRCasFinder matches to CP019195 (Salmonella enterica subsp. enterica serovar Senftenberg str. ATCC 43845 plasmid pATCC43845, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

265. spacer 2.43|3485316|32|NC_021812|CRT,CRISPRCasFinder matches to NZ_CP045449 (Salmonella enterica subsp. enterica serovar Schwarzengrund strain 12888 plasmid p280_12888, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

266. spacer 2.43|3485316|32|NC_021812|CRT,CRISPRCasFinder matches to NZ_CP015096 (Pelagibaca abyssi strain JLT2014 plasmid pPABY8, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
cctcggtctcgtcctcggtctcggcctcggtc------	Protospacer
      ***** .***********.******

267. spacer 2.43|3485316|32|NC_021812|CRT,CRISPRCasFinder matches to MN732922 (Escherichia coli strain 49K plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

268. spacer 2.43|3485316|32|NC_021812|CRT,CRISPRCasFinder matches to NZ_CP020493 (Salmonella enterica subsp. enterica strain 08-00436 plasmid pSE08-00436-1, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

269. spacer 2.43|3485316|32|NC_021812|CRT,CRISPRCasFinder matches to CP031284 (Escherichia fergusonii strain 40A plasmid p280_40A, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

270. spacer 2.43|3485316|32|NC_021812|CRT,CRISPRCasFinder matches to CP042895 (Escherichia coli strain CFSAN061772 plasmid pCFSAN061772_02, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

271. spacer 2.43|3485316|32|NC_021812|CRT,CRISPRCasFinder matches to NZ_CP022735 (Escherichia coli strain SA186 plasmid pSA186_MCR1, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

272. spacer 2.43|3485316|32|NC_021812|CRT,CRISPRCasFinder matches to CP042898 (Escherichia coli strain CFSAN061771 plasmid pCFSAN061771_02, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

273. spacer 2.43|3485316|32|NC_021812|CRT,CRISPRCasFinder matches to NZ_CP022165 (Escherichia coli strain M160133 plasmid pM160133_p1, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

274. spacer 2.43|3485316|32|NC_021812|CRT,CRISPRCasFinder matches to NZ_CP012931 (Salmonella enterica subsp. enterica serovar Heidelberg strain N13-01290 plasmid pN13-01290_23, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

275. spacer 2.43|3485316|32|NC_021812|CRT,CRISPRCasFinder matches to NZ_CP023143 (Escherichia coli strain CFSAN061770 plasmid pEGY1-MCR-1, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

276. spacer 2.43|3485316|32|NC_021812|CRT,CRISPRCasFinder matches to NZ_CP026936 (Escherichia coli strain CFS3292 plasmid pCFS3292-1, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

277. spacer 2.43|3485316|32|NC_021812|CRT,CRISPRCasFinder matches to NZ_CP025402 (Escherichia coli strain MS8345 plasmid pMS8345A, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

278. spacer 2.43|3485316|32|NC_021812|CRT,CRISPRCasFinder matches to NZ_CP026933 (Escherichia coli strain CFS3273 plasmid pCFS3273-1, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

279. spacer 2.43|3485316|32|NC_021812|CRT,CRISPRCasFinder matches to NZ_MH924589 (Escherichia coli strain RDB9 plasmid pRDB9, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

280. spacer 2.43|3485316|32|NC_021812|CRT,CRISPRCasFinder matches to NZ_MH208235 (Escherichia coli strain APECA2 plasmid pJMA2, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

281. spacer 2.43|3485316|32|NC_021812|CRT,CRISPRCasFinder matches to NZ_MK169211 (Escherichia coli strain DUK14-2 plasmid pMOO-32, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

282. spacer 2.43|3485316|32|NC_021812|CRT,CRISPRCasFinder matches to NZ_CP016838 (Salmonella enterica subsp. enterica serovar Senftenberg strain 775W (ATCC 43845) plasmid pSSE-ATCC-43845, complete sequence) position: , mismatch: 10, identity: 0.688

------tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
tatcggtatcggtatcggtctcggtctcggat------	Protospacer
      * ***** ****************

283. spacer 2.43|3485316|32|NC_021812|CRT,CRISPRCasFinder matches to NZ_CP045074 (Paracoccus kondratievae strain BJQ0001 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

tctcggtctcggtctcggtctcggtagtgacg	CRISPR spacer
cgcgcagcccggtctcggtctcggttgtggcg	Protospacer
. .  . *.**************** ***.**

284. spacer 2.46|3485499|32|NC_021812|CRT,CRISPRCasFinder matches to NZ_CP044540 (Borrelia sp. CA690 plasmid lp17, complete sequence) position: , mismatch: 10, identity: 0.688

actgcttatcattgattttattgatttttccc	CRISPR spacer
cattaaagtcatttattttattggtttttccg	Protospacer
  *    .***** *********.*******

285. spacer 2.46|3485499|32|NC_021812|CRT,CRISPRCasFinder matches to NZ_LR215005 (Mycoplasma conjunctivae strain NCTC10147 plasmid 9) position: , mismatch: 10, identity: 0.688

actgcttatcattgattttattgatttttccc	CRISPR spacer
ttctttcatcattgattttcttgatttctcaa	Protospacer
 .. .*.************ *******.**

286. spacer 3.1|3501846|32|NC_021812|CRISPRCasFinder,CRT matches to NZ_CP054615 (Azospirillum oryzae strain KACC 14407 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

atcttcatattgcgtgacgctgccgatgaacg	CRISPR spacer
tgccggatatggcgtgacgatgccgatgatgt	Protospacer
  *.  **** ******** *********

287. spacer 3.4|3502029|32|NC_021812|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP044072 (Pseudomonas oryzihabitans strain FDAARGOS_657 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

tgcccgttctgcctcttcgcactctcgatcaa	CRISPR spacer
tgcccgttctgtctcttggcactgccaccttc	Protospacer
***********.***** ***** .*. ..

288. spacer 3.9|3502334|32|NC_021812|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019257 (Escherichia coli strain 13TMH22 plasmid p13TMH22-1, complete sequence) position: , mismatch: 10, identity: 0.688

aggaactaaacagcctgaccgttgaggatctg	CRISPR spacer
ggtttaccgacagcctgacggttgacgatctg	Protospacer
.*    . .********** ***** ******

289. spacer 3.9|3502334|32|NC_021812|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019274 (Escherichia coli strain 13P477T plasmid p13P477T-1, complete sequence) position: , mismatch: 10, identity: 0.688

aggaactaaacagcctgaccgttgaggatctg	CRISPR spacer
ggtttaccgacagcctgacggttgacgatctg	Protospacer
.*    . .********** ***** ******

290. spacer 3.9|3502334|32|NC_021812|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019275 (Escherichia coli strain 13P477T plasmid p13P477T-2, complete sequence) position: , mismatch: 10, identity: 0.688

aggaactaaacagcctgaccgttgaggatctg	CRISPR spacer
ggtttaccgacagcctgacggttgacgatctg	Protospacer
.*    . .********** ***** ******

291. spacer 3.9|3502334|32|NC_021812|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019279 (Escherichia coli strain 13P477T plasmid p13P477T-6, complete sequence) position: , mismatch: 10, identity: 0.688

aggaactaaacagcctgaccgttgaggatctg	CRISPR spacer
ggtttaccgacagcctgacggttgacgatctg	Protospacer
.*    . .********** ***** ******

292. spacer 3.9|3502334|32|NC_021812|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019246 (Escherichia coli strain Combat13F7 plasmid pCombat13F7-1, complete sequence) position: , mismatch: 10, identity: 0.688

aggaactaaacagcctgaccgttgaggatctg	CRISPR spacer
ggtttaccgacagcctgacggttgacgatctg	Protospacer
.*    . .********** ***** ******

293. spacer 3.9|3502334|32|NC_021812|CRISPRCasFinder,CRT,PILER-CR matches to NC_049342 (Escherichia phage 500465-1, complete genome) position: , mismatch: 10, identity: 0.688

aggaactaaacagcctgaccgttgaggatctg	CRISPR spacer
ggtttaccgacagcctgacggttgacgatctg	Protospacer
.*    . .********** ***** ******

294. spacer 3.9|3502334|32|NC_021812|CRISPRCasFinder,CRT,PILER-CR matches to KY271398 (Klebsiella phage 4 LV-2017, complete genome) position: , mismatch: 10, identity: 0.688

aggaactaaacagcctgaccgttgaggatctg	CRISPR spacer
ggtttaccgacagcctgacggttgacgatctg	Protospacer
.*    . .********** ***** ******

295. spacer 3.9|3502334|32|NC_021812|CRISPRCasFinder,CRT,PILER-CR matches to CP025900 (Escherichia phage sp., complete genome) position: , mismatch: 10, identity: 0.688

aggaactaaacagcctgaccgttgaggatctg	CRISPR spacer
ggtttaccgacagcctgacggttgacgatctg	Protospacer
.*    . .********** ***** ******

296. spacer 3.16|3502761|32|NC_021812|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP030264 (Ensifer adhaerens strain Corn53 plasmid AB, complete sequence) position: , mismatch: 10, identity: 0.688

gtggtggcctcaaataaattcgagcgctggag	CRISPR spacer
aaacttgcctcaaataaattcgcgcggtgttc	Protospacer
. . * **************** *** **

297. spacer 2.27|3485514|32|NC_021812|PILER-CR matches to NZ_CP041669 (Legionella israelensis strain L18-01051 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.656

actgcttatcattgattttattgatttttccc	CRISPR spacer
ttgatttattattgattttattcattttatta	Protospacer
 . ..****.************ ***** ..

298. spacer 2.46|3485499|32|NC_021812|CRT,CRISPRCasFinder matches to NZ_CP041669 (Legionella israelensis strain L18-01051 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.656

actgcttatcattgattttattgatttttccc	CRISPR spacer
ttgatttattattgattttattcattttatta	Protospacer
 . ..****.************ ***** ..

299. spacer 3.13|3502578|32|NC_021812|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP054036 (Rhizobium sp. JKLM13E plasmid pPR13E05, complete sequence) position: , mismatch: 11, identity: 0.656

gggcactatgaacggatcggcgctgatgccgg	CRISPR spacer
atagactaggagcggatcggcgctgatcggaa	Protospacer
. . **** **.***************   ..

300. spacer 3.13|3502578|32|NC_021812|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022568 (Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK04, complete sequence) position: , mismatch: 11, identity: 0.656

gggcactatgaacggatcggcgctgatgccgg	CRISPR spacer
atagactaggagcggatcggcgctgatcggaa	Protospacer
. . **** **.***************   ..

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

61996 : 82893

Burkholderia_phage(45.0%)

tail,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000587739.1\|61996_62638_-	hypothetical protein	A0A077SLK3	Escherichia_phage	4.6e-33	37.9
WP_024132246.1\|63216_63633_-	serine acetyltransferase	NA	NA	NA	NA
WP_000084336.1\|64013_64469_-	hypothetical protein	NA	NA	NA	NA
WP_001151758.1\|64465_65080_-	DUF4376 domain-containing protein	NA	NA	NA	NA
WP_000368193.1\|65086_66745_-\|tail	tail protein	A0A0M3ULF6	Salmonella_phage	1.8e-52	52.7
WP_000359509.1\|66747_67380_-\|tail	phage tail protein I	Q6QI98	Burkholderia_phage	8.6e-24	56.4
WP_000951734.1\|67372_68488_-\|plate	baseplate protein	Q6QI99	Burkholderia_phage	3.1e-101	52.2
WP_001093501.1\|68478_68838_-\|plate	baseplate protein	Q6QIA0	Burkholderia_phage	2.8e-35	64.2
WP_000632053.1\|69001_70549_-	hypothetical protein	B9UDL6	Salmonella_phage	3.8e-49	29.9
WP_000703633.1\|70548_71478_-	glycosyltransferase family 2 protein	S5FKN0	Shigella_phage	1.4e-150	84.1
WP_000593182.1\|71474_71837_-	GtrA family protein	I1TED9	Salmonella_phage	1.2e-43	70.8
WP_000679398.1\|72164_72887_-\|plate	phage baseplate assembly protein V	A0A067ZIM2	Vibrio_phage	3.3e-11	41.0
WP_000818154.1\|72896_73940_-	phage late control D family protein	Q6QIA2	Burkholderia_phage	2.5e-76	45.1
WP_001269716.1\|73927_74137_-	membrane protein	A4JWL2	Burkholderia_virus	9.8e-17	60.3
WP_000271420.1\|74136_75090_-	chemotaxis protein	A4JWL1	Burkholderia_virus	2.3e-36	50.8
WP_001262499.1\|75089_77444_-\|tail	phage tail tape measure protein	A4JWL0	Burkholderia_virus	9.0e-66	30.6
WP_001185654.1\|77540_77669_-\|tail	GpE family phage tail protein	NA	NA	NA	NA
WP_001003642.1\|77628_77946_-\|tail	phage tail assembly protein	NA	NA	NA	NA
WP_000907497.1\|77997_78522_-\|tail	phage major tail tube protein	Q6QIA9	Burkholderia_phage	2.3e-67	69.0
WP_000729852.1\|78521_79949_-\|tail	phage tail sheath family protein	A4JWK5	Burkholderia_virus	1.1e-194	70.9
WP_000875314.1\|79938_80136_-	hypothetical protein	Q6QIB1	Burkholderia_phage	8.6e-07	52.9
WP_000449433.1\|80132_80588_-	hypothetical protein	NA	NA	NA	NA
WP_000777266.1\|80747_81062_-	membrane protein	Q6QIC4	Burkholderia_phage	6.4e-20	49.1
WP_001270441.1\|81074_81680_-	transglycosylase SLT domain-containing protein	Q5ZQZ1	Pseudomonas_phage	2.5e-60	59.9
WP_001226442.1\|81682_81970_-	membrane protein	Q6QIC8	Burkholderia_phage	2.3e-16	49.1
WP_000615248.1\|82545_82893_+	DNA-binding protein	Q6QIE8	Burkholderia_phage	4.9e-21	51.5

DBSCAN-SWA_2

851103 : 894699

Enterobacteria_phage(44.44%)

lysis,protease,integrase,coat,portal,terminase

attL 854950:854995|attR 894215:894260

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001043660.1\|851103_852156_-	phosphoporin PhoE	Q1MVN1	Enterobacteria_phage	2.2e-112	58.5
WP_001285275.1\|852438_853542_+	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	6.9e-61	39.8
WP_000893221.1\|853553_854804_+	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	2.1e-98	48.2
854950:854995	attL	NA	NA	NA	NA
WP_000051900.1\|855009_856173_-\|integrase	site-specific integrase	A0A075B8E2	Enterobacteria_phage	2.4e-229	99.7
WP_000016640.1\|856402_857038_-	hypothetical protein	A0A075B8I7	Enterobacteria_phage	1.3e-120	99.5
WP_001277769.1\|857138_857318_-	Eag protein	A0A075B8F7	Enterobacteria_phage	1.6e-28	98.3
WP_000208013.1\|857414_858101_-	DUF550 domain-containing protein	S4TSR6	Salmonella_phage	4.3e-53	53.2
WP_000224223.1\|858111_858375_-	hypothetical protein	A0A2P0P958	Salmonella_phage	2.0e-30	72.4
WP_001289978.1\|858376_858862_-	ead/Ea22-like family protein	A5VWB3	Enterobacteria_phage	1.3e-43	86.1
WP_000812182.1\|858858_859485_-	hypothetical protein	A5VWB1	Enterobacteria_phage	7.1e-71	71.2
WP_001682200.1\|859481_859646_-	DUF2737 family protein	A0A2I6PID4	Escherichia_phage	1.6e-22	98.1
WP_001111313.1\|859656_859953_-	DUF2856 family protein	Q76H42	Enterobacteria_phage	3.9e-43	90.8
WP_000031375.1\|860283_860901_-	ERF family protein	A0A0N7CFJ3	Salmonella_phage	3.3e-105	100.0
WP_001163402.1\|860897_861041_-	hypothetical protein	A0A075B8I9	Enterobacteria_phage	3.2e-19	100.0
WP_000158027.1\|861030_861219_-	DUF5444 family protein	A0A075B8F9	Enterobacteria_phage	1.4e-30	100.0
WP_000582314.1\|861199_861358_-\|protease	protease FtsH-inhibitory lysogeny factor CIII	A0A075B8H4	Enterobacteria_phage	4.0e-23	100.0
WP_000776964.1\|861443_861755_-	superinfection exclusion protein	A0A075B8E5	Enterobacteria_phage	1.1e-48	100.0
WP_001737461.1\|861902_862106_-	DUF551 domain-containing protein	A0A0N7CAQ5	Salmonella_phage	1.7e-34	100.0
WP_000651935.1\|862105_862342_-	hypothetical protein	A0A075B8J0	Enterobacteria_phage	4.3e-37	100.0
WP_000213983.1\|862378_862573_-	hypothetical protein	A0A075B8G0	Enterobacteria_phage	2.5e-30	100.0
WP_001682202.1\|862787_863366_+	superinfection exclusion protein B	A0A075B8E6	Enterobacteria_phage	8.8e-92	100.0
WP_000216175.1\|863386_863689_-	hypothetical protein	B8K1E6	Salmonella_phage	1.1e-48	98.0
WP_001095984.1\|864042_864693_-	LexA family transcriptional regulator	B1B6L9	Salmonella_phage	5.4e-122	100.0
WP_000276884.1\|864773_864959_+	hypothetical protein	Q5G8T3	Enterobacteria_phage	5.4e-27	100.0
WP_000424167.1\|865065_865344_+	transcriptional regulator	Q5G8T2	Enterobacteria_phage	2.5e-44	100.0
WP_001125981.1\|865378_865525_+	DUF2740 family protein	A0A075B8K7	Enterobacteria_phage	1.5e-19	100.0
WP_000067075.1\|865517_866333_+	replication protein	A0A075B8J2	Enterobacteria_phage	9.4e-148	100.0
WP_001248406.1\|866329_867706_+	DNA helicase	A0A075B8G2	Enterobacteria_phage	3.3e-254	100.0
WP_000736921.1\|867779_868217_+	recombination protein NinB	A8CGE3	Salmonella_phage	1.3e-79	100.0
WP_000679702.1\|868213_868387_+	hypothetical protein	C6ZR56	Salmonella_phage	5.2e-32	100.0
WP_000113772.1\|868353_868530_+	NinE family protein	I6RSQ2	Salmonella_phage	4.6e-28	100.0
WP_001531428.1\|868532_868865_+	DUF2591 domain-containing protein	A0A075B8G3	Enterobacteria_phage	3.5e-61	100.0
WP_000950959.1\|868857_869034_+	protein ninF	I6S668	Salmonella_phage	2.5e-26	100.0
WP_001129733.1\|869026_869638_+	recombination protein NinG	A0A075B8E9	Enterobacteria_phage	1.3e-98	100.0
WP_000036317.1\|869634_869859_+	hypothetical protein	Q5G8R9	Enterobacteria_phage	2.2e-38	100.0
WP_000149925.1\|869855_870059_+	protein ninH	A0A075B8J4	Enterobacteria_phage	7.2e-33	100.0
WP_000219131.1\|870039_870219_+	hypothetical protein	A0A1U8QR34	Salmonella_phage	1.4e-24	100.0
WP_001235453.1\|870215_870839_+	antitermination protein	A0A075B8H9	Enterobacteria_phage	2.3e-114	100.0
WP_000286100.1\|871277_871481_+	hypothetical protein	I6R0S9	Salmonella_phage	1.1e-33	100.0
WP_000074137.1\|871458_871956_+	lysozyme	A0A1R3Y5W5	Salmonella_virus	6.0e-89	97.0
WP_001531485.1\|872044_872482_+\|lysis	lysis protein	O80289	Bacteriophage	9.1e-73	99.3
WP_001177703.1\|872694_873381_+	Rha family transcriptional regulator	A0A192Y918	Salmonella_phage	4.7e-124	99.6
WP_000807785.1\|873683_873926_+	DUF2560 family protein	A0A0M4R322	Salmonella_phage	7.5e-37	100.0
WP_001278047.1\|873927_874107_+	hypothetical protein	Q9AZ02	Salmonella_phage	3.0e-22	91.5
WP_000729925.1\|874130_874619_+	hypothetical protein	O80290	Bacteriophage	2.9e-88	100.0
WP_000417849.1\|874596_876096_+\|terminase	terminase	A0A192Y824	Salmonella_phage	1.4e-306	99.8
WP_000774656.1\|876095_878273_+\|portal	portal protein	A0A2H4FNE2	Salmonella_phage	0.0e+00	99.9
WP_000433852.1\|878286_879198_+	scaffold protein	A0A192Y6T4	Salmonella_phage	4.9e-161	100.0
WP_001196938.1\|879197_880490_+\|coat	coat protein	A0A192Y6V4	Salmonella_phage	3.2e-243	100.0
WP_000684729.1\|880528_880738_+	hypothetical protein	A0A192Y697	Salmonella_phage	1.3e-32	100.0
WP_001166098.1\|880721_881222_+	packaged DNA stabilization protein p27	I1TEJ0	Salmonella_phage	5.5e-90	99.4
WP_001122424.1\|881181_882600_+	Packaged DNA stabilization protein gp10	A0A075B8I2	Enterobacteria_phage	7.6e-278	100.0
WP_000774927.1\|882603_883305_+	hypothetical protein	A0A192Y6T9	Salmonella_phage	8.8e-78	100.0
WP_000627697.1\|883304_883760_+	DUF2824 family protein	A0A192Y6V9	Salmonella_phage	5.2e-87	100.0
WP_000964902.1\|883762_884455_+	hypothetical protein	G5DA80	Enterobacteria_phage	1.2e-108	98.7
WP_000246945.1\|884464_885760_+	phage DNA ejection protein	Q716G3	Shigella_phage	2.1e-181	84.5
WP_001029838.1\|885759_887757_+	hypothetical protein	Q716G2	Shigella_phage	0.0e+00	94.9
WP_000749288.1\|887847_888333_-	hypothetical protein	NA	NA	NA	NA
WP_000287064.1\|888735_888990_-	Arc family DNA-binding protein	A0A088CPT2	Enterobacteria_phage	4.4e-19	63.3
WP_000129930.1\|889125_891129_+	endorhamnosidase	A0A2H4FWI0	Salmonella_phage	0.0e+00	99.9
WP_000671495.1\|891187_892645_-	hypothetical protein	A0A192Y7W8	Salmonella_phage	4.5e-241	100.0
WP_000703640.1\|892634_893567_-	glycosyltransferase family 2 protein	A0A192Y8W7	Salmonella_phage	5.5e-176	100.0
WP_000915528.1\|893563_893926_-	GtrA family protein	A0A192Y6N5	Salmonella_phage	5.0e-61	100.0
WP_001683918.1\|894423_894699_+	DUF4102 domain-containing protein	Q7M297	Enterobacteria_phage	1.9e-23	64.1
894215:894260	attR	NA	NA	NA	NA

DBSCAN-SWA_3

1498925 : 1506948

Dickeya_phage(14.29%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001201751.1\|1498925_1500044_+	macrolide transporter subunit MacA	A0A140XAI1	Dickeya_phage	1.4e-08	38.9
WP_000125890.1\|1500040_1501987_+	macrolide ABC transporter ATP-binding protein/permease MacB	G9BWD6	Planktothrix_phage	9.1e-40	42.3
WP_000447499.1\|1502116_1502338_-	cold shock-like protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	9.3e-18	64.2
WP_000520789.1\|1502661_1502982_+\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	4.5e-13	45.7
WP_000934063.1\|1503012_1505289_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	6.2e-165	42.3
WP_000502119.1\|1505479_1505938_+\|transposase	IS200/IS605-like element IS200F family transposase	I4AZI8	Saccharomonospora_phage	1.0e-13	31.5
WP_001117984.1\|1506211_1506409_-	hypothetical protein	NA	NA	NA	NA
WP_001531374.1\|1506570_1506948_-	hypothetical protein	A0A077KET4	Ralstonia_phage	1.7e-19	40.2

DBSCAN-SWA_4

1557557 : 1655517

103

Salmonella_phage(44.83%)

tRNA,tail,lysis,protease,integrase,transposase,portal,terminase

attL 1560466:1560485|attR 1631404:1631423

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001154025.1\|1557557_1558361_+\|tRNA	tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM	NA	NA	NA	NA
WP_001288828.1\|1558353_1559676_+	chromosome partition protein MukF	NA	NA	NA	NA
WP_000060025.1\|1559656_1560361_+	chromosome partition protein MukE	NA	NA	NA	NA
WP_000572753.1\|1560360_1564827_+	chromosome partition protein MukB	NA	NA	NA	NA
1560466:1560485	attL	NA	NA	NA	NA
WP_000925883.1\|1565171_1566992_+	L,D-transpeptidase	NA	NA	NA	NA
WP_000357052.1\|1567251_1567800_+	YcbK family protein	A0A0K1LKR7	Rhodobacter_phage	1.2e-05	33.7
WP_001109471.1\|1567827_1568475_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_000462653.1\|1568536_1569727_-	aspartate transaminase	NA	NA	NA	NA
WP_000977713.1\|1569911_1571003_-	porin OmpF	Q1MVN1	Enterobacteria_phage	2.2e-99	51.7
WP_000117870.1\|1571609_1573010_-\|tRNA	asparagine--tRNA ligase	A0A167RLM0	Powai_lake_megavirus	4.5e-81	35.1
WP_000762342.1\|1573210_1573672_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA
WP_000544849.1\|1573988_1575203_+	diaminopropionate ammonia-lyase	NA	NA	NA	NA
WP_000893206.1\|1575447_1576881_+	sodium:alanine symporter family protein	NA	NA	NA	NA
WP_000191413.1\|1576961_1578164_-	nicotinate phosphoribosyltransferase	NA	NA	NA	NA
WP_001262307.1\|1578358_1579651_-\|integrase	site-specific integrase	S4TSP2	Salmonella_phage	3.4e-253	100.0
WP_000065276.1\|1579695_1579944_-	excisionase family protein	S4TND0	Salmonella_phage	4.7e-42	100.0
WP_001682304.1\|1579984_1580224_-	DUF4060 family protein	S4TR31	Salmonella_phage	3.3e-37	98.7
WP_000189634.1\|1580229_1581099_-	Dam family site-specific DNA-(adenine-N6)-methyltransferase	A0A1C9II58	Salmonella_phage	7.2e-146	86.3
WP_000187054.1\|1581095_1581776_-	YqaJ viral recombinase family protein	A0A0M3ULE0	Salmonella_phage	3.3e-130	97.8
WP_000100830.1\|1581772_1582558_-	phage recombination protein Bet	A0A0M4RD39	Salmonella_phage	2.4e-148	98.8
WP_000995352.1\|1582563_1582860_-	host-nuclease inhibitor protein Gam	A0A0M5M5Z9	Salmonella_phage	1.1e-48	100.0
WP_000186242.1\|1582950_1583151_-	cell division protein FtsZ	G8C7T2	Escherichia_phage	2.4e-12	48.4
WP_000373338.1\|1583438_1583645_+	hypothetical protein	K7P7I0	Enterobacteria_phage	1.6e-16	67.6
WP_000091280.1\|1583671_1584106_-	hypothetical protein	NA	NA	NA	NA
WP_000439725.1\|1584107_1584533_-	hypothetical protein	NA	NA	NA	NA
WP_001230956.1\|1584575_1584971_-	helix-turn-helix domain-containing protein	K7PM35	Enterobacteria_phage	3.5e-47	72.5
WP_000992434.1\|1585075_1585312_+	Rha family transcriptional regulator	A0A0M4QX15	Salmonella_phage	9.0e-27	73.1
WP_015675517.1\|1585277_1585652_+	hypothetical protein	S4TTD7	Salmonella_phage	1.9e-63	99.2
WP_000024046.1\|1585743_1586649_+	replication protein	A0A0M5M7Y1	Salmonella_phage	9.1e-176	99.7
WP_000788826.1\|1586645_1587347_+	hypothetical protein	A0A0M3ULE2	Salmonella_phage	1.9e-128	99.1
WP_023602525.1\|1587391_1587793_+	ParB/RepB/Spo0J family partition protein	S4TTI6	Salmonella_phage	5.4e-72	98.5
WP_000215887.1\|1587789_1588323_+	hypothetical protein	A0A192Y7N1	Salmonella_phage	8.1e-92	89.8
WP_000224239.1\|1588324_1588582_+	hypothetical protein	A0A192Y5W0	Salmonella_phage	4.5e-40	95.3
WP_000208143.1\|1588592_1588994_+	hypothetical protein	I6R0R2	Salmonella_phage	1.2e-18	82.0
WP_000877758.1\|1589101_1589746_+	hypothetical protein	NA	NA	NA	NA
WP_001217669.1\|1589976_1590210_+	DinI family protein	H6WRY5	Salmonella_phage	5.6e-37	100.0
WP_014343878.1\|1590326_1590575_+	hypothetical protein	A0A0U2C0C8	Salmonella_phage	1.6e-42	100.0
WP_000929790.1\|1590609_1591212_+	DUF1367 family protein	S4TTI0	Salmonella_phage	7.5e-110	99.5
WP_001096547.1\|1591420_1592032_+	hypothetical protein	A0A0M4RU10	Salmonella_phage	4.2e-92	99.5
WP_001617856.1\|1592028_1592175_+	YlcG family protein	A0A0M5M7B2	Salmonella_phage	4.3e-19	97.9
WP_001047631.1\|1592164_1592962_+	antitermination protein	A0A0M4S661	Salmonella_phage	2.3e-151	99.6
WP_000508329.1\|1593128_1593347_+	hypothetical protein	NA	NA	NA	NA
WP_000658038.1\|1593627_1593816_+	hypothetical protein	NA	NA	NA	NA
WP_001682303.1\|1594018_1594321_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_000301013.1\|1594298_1594838_+	lysozyme	K7PLY1	Enterobacteria_phage	2.2e-76	72.4
WP_086010216.1\|1595154_1595640_+\|lysis	lysis protein	Q56118	Enterobacteria_phage	1.1e-58	80.4
WP_000371784.1\|1595850_1596384_+	DUF1441 family protein	A0A291AWV8	Escherichia_phage	1.0e-33	48.1
WP_000989238.1\|1596340_1598479_+\|terminase	phage terminase large subunit family protein	A5LH27	Enterobacteria_phage	6.9e-291	72.6
WP_000196190.1\|1598475_1598682_+	hypothetical protein	A0A1W6JT66	Pseudomonas_phage	2.9e-05	53.3
WP_001009205.1\|1598678_1600226_+\|portal	phage portal protein	A0A291AWU2	Escherichia_phage	1.1e-176	63.8
WP_077906133.1\|1600149_1602228_+\|protease	Clp protease ClpP	A0A291AWT6	Escherichia_phage	2.4e-264	69.3
WP_001107908.1\|1602318_1602642_+	DUF2190 family protein	K7PLV6	Enterobacteria_phage	7.7e-29	61.3
WP_000774239.1\|1602634_1602934_+	ATP-binding protein	K7PH43	Enterobacteria_phage	4.5e-15	45.1
WP_000453192.1\|1602914_1603481_+\|tail	phage tail protein	Q9G063	Phage_Gifsy-2	2.1e-13	95.7
WP_000196703.1\|1603477_1603879_+\|tail	tail protein	K7PHM6	Enterobacterial_phage	2.0e-42	60.9
WP_000132755.1\|1603890_1604640_+\|tail	phage tail protein	A0A291AWU6	Escherichia_phage	3.7e-90	68.6
WP_000478858.1\|1604685_1605084_+\|tail	phage minor tail protein G	K7PLV8	Enterobacteria_phage	8.6e-30	56.8
WP_010989009.1\|1605080_1605410_+\|tail	phage tail assembly protein T	A5LH37	Enterobacteria_phage	5.0e-23	50.9
WP_065305406.1\|1605489_1608477_+\|tail	phage tail tape measure protein	A0A291AWX1	Escherichia_phage	2.5e-262	62.0
WP_000978295.1\|1608473_1608806_+\|tail	phage tail protein	A5LH39	Enterobacteria_phage	2.6e-35	61.5
WP_000410972.1\|1608904_1609429_+	outer membrane beta-barrel protein	A0A1B0VBR9	Salmonella_phage	1.8e-19	35.3
WP_000877926.1\|1609518_1610052_-	superoxide dismutase [Cu-Zn]	Q9MC02	Salmonella_phage	1.8e-46	54.0
WP_001152416.1\|1610141_1610837_+\|tail	phage minor tail protein L	A0A0K2FJ01	Enterobacteria_phage	1.0e-89	66.7
WP_000606356.1\|1610846_1611584_+\|tail	phage tail protein	A0A0P0ZE89	Stx2-converting_phage	5.2e-113	75.6
WP_020867839.1\|1611481_1612186_+\|tail	tail assembly protein	A5LH42	Enterobacteria_phage	2.0e-66	62.6
WP_000033414.1\|1612257_1615608_+	host specificity protein J	A0A0K2FI38	Escherichia_phage	0.0e+00	69.3
WP_000178849.1\|1615646_1615889_+	hypothetical protein	NA	NA	NA	NA
WP_001532020.1\|1615942_1618318_+\|tail	tail protein	A0A0K2FIZ6	Escherichia_phage	1.9e-87	64.9
WP_031618324.1\|1618818_1619139_+	hypothetical protein	A0A0M4QWS3	Salmonella_phage	4.9e-44	79.2
WP_000143158.1\|1619128_1619710_+\|tail	tail fiber assembly protein	A0A0M4RTP2	Salmonella_phage	1.8e-92	87.4
WP_000161705.1\|1619906_1620629_-	SPI-1 type III secretion system guanine nucleotide exchange factor SopE	NA	NA	NA	NA
WP_000388788.1\|1620841_1621060_+	helix-turn-helix domain-containing protein	S4TTF2	Salmonella_phage	1.7e-24	89.7
WP_000343758.1\|1621279_1622500_+\|transposase	ISL3 family transposase	NA	NA	NA	NA
WP_071531551.1\|1622496_1622994_-	hypothetical protein	NA	NA	NA	NA
WP_000193784.1\|1623428_1626041_+	aminopeptidase N	A0A0P0IY26	Acinetobacter_phage	6.3e-20	22.6
WP_000291723.1\|1626248_1627259_+	quinone-dependent dihydroorotate dehydrogenase	NA	NA	NA	NA
WP_001220671.1\|1627424_1627967_+	cell division protein ZapC	NA	NA	NA	NA
WP_000224069.1\|1627963_1629073_-	MOSC domain-containing protein	NA	NA	NA	NA
WP_001086485.1\|1629171_1631280_+	bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL	NA	NA	NA	NA
WP_000053044.1\|1631292_1633200_+	ABC transporter ATP-binding protein	A0A2K9L3Z8	Tupanvirus	2.4e-53	29.8
1631404:1631423	attR	NA	NA	NA	NA
WP_000433414.1\|1634473_1636114_+	intermembrane transport protein PqiB	NA	NA	NA	NA
WP_000759136.1\|1636110_1636674_+	membrane integrity-associated transporter subunit PqiC	NA	NA	NA	NA
WP_001537784.1\|1636929_1637097_+	ribosome modulation factor	NA	NA	NA	NA
WP_000227928.1\|1637196_1637715_-	bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase	NA	NA	NA	NA
WP_000156454.1\|1637783_1639544_-\|protease	Lon protease family protein	NA	NA	NA	NA
WP_000877172.1\|1639729_1640182_+	macrodomain Ter protein MatP	NA	NA	NA	NA
WP_001674965.1\|1640253_1641306_-	porin OmpA	NA	NA	NA	NA
WP_000288732.1\|1641662_1642172_-	cell division inhibitor SulA	NA	NA	NA	NA
WP_001202375.1\|1642388_1642994_+	TfoX/Sxy family DNA transformation protein	NA	NA	NA	NA
WP_000950880.1\|1642980_1645134_-	TIGR01666 family membrane protein	NA	NA	NA	NA
WP_001261222.1\|1645152_1645599_-	YccF domain-containing protein	NA	NA	NA	NA
WP_000420505.1\|1645722_1647777_+	DNA helicase IV	A7KV33	Bacillus_phage	8.5e-20	27.6
WP_000424187.1\|1647812_1648271_-	methylglyoxal synthase	NA	NA	NA	NA
WP_000847716.1\|1648365_1649028_-	DUF2057 family protein	NA	NA	NA	NA
WP_001537782.1\|1649201_1649615_+	CoA-binding protein	NA	NA	NA	NA
WP_000561983.1\|1649659_1649977_-	heat shock protein HspQ	NA	NA	NA	NA
WP_000140480.1\|1650034_1651246_-	23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI	NA	NA	NA	NA
WP_000859416.1\|1651460_1652009_+	YbhB/YbcL family Raf kinase inhibitor-like protein	NA	NA	NA	NA
WP_000548082.1\|1652034_1652814_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_000072884.1\|1652862_1653144_+	acylphosphatase	NA	NA	NA	NA
WP_000904446.1\|1653140_1653470_-	sulfurtransferase TusE	NA	NA	NA	NA
WP_000374046.1\|1653556_1654216_-\|protease	FtsH protease modulator YccA	A0A2H4JFM9	uncultured_Caudovirales_phage	2.7e-44	52.4
WP_000938191.1\|1654836_1655517_-\|protease	type III secretion system effector protease PipA	Q9MBM0	Phage_Gifsy-2	8.3e-81	70.6

DBSCAN-SWA_5

2554640 : 2565241

Morganella_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001157304.1\|2554640_2556071_-	DNA cytosine methyltransferase	E5E3X6	Burkholderia_phage	7.8e-105	57.4
WP_000377037.1\|2556144_2556840_-	phosphohydrolase	A0A1D6Y7U0	Golden_Marseillevirus	1.6e-07	27.1
WP_000107434.1\|2556919_2557231_-	hypothetical protein	NA	NA	NA	NA
WP_001080662.1\|2557881_2559078_+	porin OmpS1	Q1MVN1	Enterobacteria_phage	5.1e-110	56.1
WP_024131109.1\|2559335_2559524_-	hypothetical protein	NA	NA	NA	NA
WP_000208509.1\|2559534_2559747_-	cold-shock protein	A0A1W6JNX5	Morganella_phage	3.9e-21	70.0
WP_000457664.1\|2560201_2561470_-	Y-family DNA polymerase	I6RSM4	Salmonella_phage	1.2e-226	92.2
WP_000394197.1\|2561472_2561892_-	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	8.5e-36	60.5
WP_000500831.1\|2562018_2562180_-	hypothetical protein	NA	NA	NA	NA
WP_000598921.1\|2562660_2563458_+	DgsA anti-repressor MtfA	NA	NA	NA	NA
WP_001683376.1\|2563829_2564120_+	DUF4102 domain-containing protein	B7SYF8	Stenotrophomonas_phage	2.1e-09	52.6
WP_001219015.1\|2564767_2565241_+	peptidase	A0A0F6TJ61	Escherichia_coli_O157_typing_phage	7.1e-39	77.6

DBSCAN-SWA_6

2651236 : 2661742

Enterobacteria_phage(37.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000126349.1\|2651236_2652550_-	lipopolysaccharide biosynthesis protein RfbH	H8ZJ36	Ostreococcus_tauri_virus	7.0e-52	35.1
WP_000565905.1\|2652576_2653656_-	CDP-glucose 4,6-dehydratase	A0A222YY99	Synechococcus_phage	6.6e-16	24.1
WP_000648784.1\|2653660_2654434_-	glucose-1-phosphate cytidylyltransferase	NA	NA	NA	NA
WP_000018226.1\|2654430_2655423_-	CDP-6-deoxy-delta-3,4-glucoseen reductase	NA	NA	NA	NA
WP_000973708.1\|2655428_2655980_-	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	2.2e-52	58.0
WP_000857529.1\|2655980_2656859_-	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	9.3e-109	65.5
WP_001023662.1\|2656906_2657806_-	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	1.4e-30	36.3
WP_000697840.1\|2657805_2658891_-	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	1.2e-102	53.9
WP_000981469.1\|2659267_2660161_-	GalU regulator GalF	A0A127AW70	Bacillus_phage	4.8e-44	42.2
WP_001111845.1\|2660338_2661742_-	colanic acid biosynthesis protein WcaM	A0A291LBB9	Klebsiella_phage	6.8e-21	26.5

DBSCAN-SWA_7

2730018 : 2739189

Enterobacteria_phage(66.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000195330.1\|2730018_2732052_+\|tRNA	methionine--tRNA ligase	A0A1V0SDF2	Indivirus	1.0e-54	27.6
WP_000703137.1\|2732292_2732751_+	YehR family lipoprotein	Q9EYF5	Enterobacteria_phage	8.4e-53	72.5
WP_001197951.1\|2732922_2733453_+	YehR family lipoprotein	NA	NA	NA	NA
WP_000950413.1\|2733509_2733977_-	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	3.9e-74	90.3
WP_000598637.1\|2734023_2734743_-	two-component system response regulator BtsR	NA	NA	NA	NA
WP_000272850.1\|2734739_2736425_-	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	4.8e-279	91.3
WP_001240417.1\|2736647_2737379_+	HTH-type transcriptional regulator MlrA	Q9EYF2	Enterobacteria_phage	4.5e-101	87.9
WP_001261696.1\|2737438_2737546_+	protein YohO	NA	NA	NA	NA
WP_000824857.1\|2737526_2738258_-	ABC transporter permease	NA	NA	NA	NA
WP_000569165.1\|2738241_2739189_-	ABC transporter ATP-binding protein	F2Y1V5	Organic_Lake_phycodnavirus	3.7e-10	27.8

DBSCAN-SWA_8

2758596 : 2824982

Salmonella_phage(25.0%)

tail,holin,lysis

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000989295.1\|2758596_2759292_+\|lysis	CidB/LrgB family autolysis modulator	NA	NA	NA	NA
WP_000553526.1\|2759445_2760330_+	cytidine deaminase	NA	NA	NA	NA
WP_000920081.1\|2760506_2761226_+	outer membrane permeability protein SanA	NA	NA	NA	NA
WP_000605187.1\|2761222_2761468_+	DUF2542 family protein	NA	NA	NA	NA
WP_001136394.1\|2761672_2762914_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_000956097.1\|2762907_2764143_+	NAD-dependent dihydropyrimidine dehydrogenase subunit PreA	NA	NA	NA	NA
WP_001275101.1\|2764217_2765228_-	galactose/methyl galactoside ABC transporter permease MglC	NA	NA	NA	NA
WP_000535907.1\|2765243_2766764_-	galactose/methyl galactoside ABC transporter ATP-binding protein MglA	F2Y2R6	Organic_Lake_phycodnavirus	1.0e-09	31.9
WP_001036943.1\|2766897_2767896_-	galactose/glucose ABC transporter substrate-binding protein MglB	NA	NA	NA	NA
WP_001520237.1\|2769565_2770708_-	DUF418 family protein	NA	NA	NA	NA
WP_001139611.1\|2770722_2771391_-	GTP cyclohydrolase I FolE	M1Q6X8	Cellulophaga_phage	4.1e-56	56.3
WP_000425488.1\|2771720_2772578_+	S-formylglutathione hydrolase	NA	NA	NA	NA
WP_000876817.1\|2772566_2772956_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_001531764.1\|2772960_2774328_-	L-serine ammonia-lyase	NA	NA	NA	NA
WP_000022910.1\|2774544_2775432_+	phosphoserine phosphatase SerB	NA	NA	NA	NA
WP_000023807.1\|2775464_2776787_+	MFS transporter	NA	NA	NA	NA
WP_000488244.1\|2776830_2778822_-	catecholate siderophore receptor CirA	A0A0P0I887	Acinetobacter_phage	6.7e-14	37.9
WP_000535000.1\|2779167_2780637_-	lysine-specific permease	NA	NA	NA	NA
WP_000548316.1\|2780826_2781690_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_000137966.1\|2781810_2782860_+	YeiH family protein	NA	NA	NA	NA
WP_000873906.1\|2782938_2783796_+	deoxyribonuclease IV	A0A1V0SBL9	Catovirus	1.3e-22	28.5
WP_000854395.1\|2783860_2785549_-	PTS fructose transporter subunit IIBC	NA	NA	NA	NA
WP_000091249.1\|2785565_2786504_-	1-phosphofructokinase	NA	NA	NA	NA
WP_000487287.1\|2786503_2787634_-	fused PTS fructose transporter subunit IIA/HPr protein	NA	NA	NA	NA
WP_000551937.1\|2788001_2789183_+	sugar efflux transporter SetB	NA	NA	NA	NA
WP_001213897.1\|2789246_2789912_-	membrane protein	NA	NA	NA	NA
WP_001519564.1\|2789913_2790036_-	membrane protein	NA	NA	NA	NA
WP_001523448.1\|2790423_2790678_-	YkgJ family cysteine cluster protein	NA	NA	NA	NA
WP_001136822.1\|2791001_2791574_+	elongation factor P-like protein YeiP	NA	NA	NA	NA
WP_000169346.1\|2791786_2792773_+	GTP-binding protein	NA	NA	NA	NA
WP_000178095.1\|2792802_2793522_+	phosphatase PAP2 family protein	NA	NA	NA	NA
WP_000241015.1\|2793935_2794508_+	bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase	A0A1V0DZX6	Clostridioides_phage	8.1e-13	38.9
WP_000957755.1\|2794833_2796390_+	cyclic di-GMP phosphodiesterase	NA	NA	NA	NA
WP_000561742.1\|2796496_2798302_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_000501626.1\|2798311_2799406_+	microcin C ABC transporter permease YejB	NA	NA	NA	NA
WP_001137747.1\|2799405_2800431_+	ABC transporter permease	NA	NA	NA	NA
WP_000222013.1\|2800432_2802022_+	microcin C ABC transporter ATP-binding protein YejF	G9BWD6	Planktothrix_phage	7.2e-19	32.1
WP_001094639.1\|2802025_2802370_-	hypothetical protein	NA	NA	NA	NA
WP_000213347.1\|2802760_2803951_-	Bcr/CflA family multidrug efflux MFS transporter	S4TR35	Salmonella_phage	2.4e-19	22.2
WP_001234834.1\|2803978_2804674_-	16S rRNA pseudouridine(516) synthase RsuA	NA	NA	NA	NA
WP_000578130.1\|2804825_2806586_+	DEAD/DEAH box helicase	M4Q3N1	Vibrio_phage	1.4e-100	41.8
WP_000494192.1\|2806710_2806995_+	50S ribosomal protein L25	NA	NA	NA	NA
WP_000033443.1\|2807103_2807724_-	hypothetical protein	NA	NA	NA	NA
WP_000050806.1\|2807751_2808759_-	nucleoid-associated protein YejK	A0A1V0E8C0	Vibrio_phage	4.5e-83	48.3
WP_001135904.1\|2808938_2809166_+	YejL family protein	NA	NA	NA	NA
WP_000256150.1\|2809197_2810958_+	cardiolipin transport protein PbgA	NA	NA	NA	NA
WP_000806401.1\|2811238_2811742_-	LexA family transcriptional regulator	Q1MVE7	Enterobacteria_phage	9.5e-50	71.3
WP_000884778.1\|2811769_2812060_+	DinI family protein	S4TND2	Salmonella_phage	4.7e-25	83.3
WP_000022213.1\|2814283_2814727_-\|tail	tail fiber assembly protein	A0A0F7LDZ0	Escherichia_phage	1.4e-28	43.9
WP_001215679.1\|2815104_2815632_-\|tail	tail fiber assembly protein	A0A1S6KZZ1	Salmonella_phage	3.1e-11	31.3
WP_000554739.1\|2815634_2816876_-	hypothetical protein	Q8HAB4	Salmonella_phage	1.0e-52	95.3
WP_001120499.1\|2817468_2817798_-\|holin	phage holin, lambda family	Q8SBE1	Shigella_phage	3.9e-36	94.6
WP_000894638.1\|2818094_2819426_+	NTPase	R9TRQ8	Vibrio_phage	4.6e-19	28.5
WP_010989045.1\|2819454_2819823_-	antitermination protein Q	A5LH77	Enterobacteria_phage	7.4e-52	81.7
WP_001202279.1\|2819837_2820827_-	DUF968 domain-containing protein	A0A1C9IHZ5	Salmonella_phage	6.0e-189	97.3
WP_001115840.1\|2821155_2823522_-	SPI-2 type III secretion system effector E3 ubiquitin transferase SspH2	Q9MBL9	Phage_Gifsy-2	2.9e-72	88.7
WP_001113462.1\|2823690_2823894_-\|tail	tail protein	NA	NA	NA	NA
WP_000624225.1\|2824190_2824982_-\|tail	tail protein	Q1MVL8	Enterobacteria_phage	1.7e-48	31.6

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NC_021813

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NC_021842

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. NC_021812

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection