CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NC_021834	Campylobacter jejuni 32488, complete sequence	1 crisprs	cas1,cas9,csa3,DEDDh,WYL	0	1	2	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NC_021834_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_021834_1

652140-652240

TypeII

Consensus_repeat	Method
TTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	CRISPRCasFinder

1 spacers

cas2,cas1,cas9

The CRISPR arrays of NC_021834_1

>merge|NC_021834|1|652140-652240|CRISPRCasFinder
TTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAATCTGTTTTATTGTCAATAACGCCTTTACTAAGTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT

>NC_021834|1|1|652140-652240|CRISPRCasFinder
TTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	CTGTTTTATTGTCAATAACGCCTTTACTAAG
TTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT

Protein	Signature genes	Signature genes Name	Protein_function
NC_021834.1\|WP_020836909.1\|652808_653699_-\|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|187851
NC_021834.1\|WP_020836906.1\|646324_647038_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225916
NC_021834.1\|WP_002851155.1\|661382_662420_-\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|224292
NC_021834.1\|WP_002851407.1\|660654_661386_+\|mannosyl-glycoprotein-endo-beta-N-acetylglucosamidase	unknown	unknown	gnl\|CDD\|225539
NC_021834.1\|WP_002858888.1\|647341_648490_-\|carboxynorspermidine-decarboxylase	unknown	unknown	gnl\|CDD\|273414
NC_021834.1\|WP_002855462.1\|663060_664281_-\|glucose-6-phosphate-isomerase	unknown	unknown	gnl\|CDD\|235168
NC_021834.1\|WP_002779488.1\|650156_650378_+\|MoaD/ThiS-family-protein	unknown	unknown	gnl\|CDD\|224888
NC_021834.1\|WP_002851173.1\|659930_660680_+\|diaminopimelate-epimerase	unknown	unknown	gnl\|CDD\|234768
NC_021834.1\|WP_020836907.1\|650828_652019_+\|molybdopterin-molybdotransferase-MoeA	unknown	unknown	gnl\|CDD\|223380
NC_021834.1\|WP_002851264.1\|642716_643358_-\|4Fe-4S-dicluster-domain-containing-protein	unknown	unknown	gnl\|CDD\|319893
NC_021834.1\|WP_002851174.1\|641787_642720_-\|formate-dehydrogenase-subunit-gamma	unknown	unknown	gnl\|CDD\|130645
NC_021834.1\|WP_020836910.1\|653695_656650_-\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	COG3513_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226044
NC_021834.1\|WP_002858889.1\|650378_650825_+\|molybdenum-cofactor-biosynthesis-protein-MoaE	unknown	unknown	gnl\|CDD\|223391
NC_021834.1\|WP_002803269.1\|646158_646350_-\|twin-arginine-translocation-signal-domain-containing-protein	unknown	unknown	gnl\|CDD\|236534
NC_021834.1\|WP_002851523.1\|659328_659934_+\|dephospho-CoA-kinase	unknown	unknown	gnl\|CDD\|234620
NC_021834.1\|WP_079263690.1\|643354_646159_-\|formate-dehydrogenase-subunit-alpha	unknown	unknown	gnl\|CDD\|239153
NC_021834.1\|WP_020836908.1\|652384_652816_-\|CRISPR-associated-endonuclease-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226043
NC_021834.1\|WP_002851546.1\|662484_662934_-\|DNA-starvation/stationary-phase-protection-protein	unknown	unknown	gnl\|CDD\|223854
NC_021834.1\|WP_002874968.1\|648613_650155_+\|multicopper-oxidase-CueO	unknown	unknown	gnl\|CDD\|225043
NC_021834.1\|WP_002851320.1\|658278_659268_-\|phosphoribosylformylglycinamidine-cyclo-ligase	unknown	unknown	gnl\|CDD\|235439

Protein	Function_ID	Function_description	E-value
NC_021834.1\|WP_020836909.1\|652808_653699_-\|type-II-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|187851	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer intergration. Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	5.23079e-123
NC_021834.1\|WP_020836906.1\|646324_647038_-\|hypothetical-protein	gnl\|CDD\|225916	COG3381, TorD, Uncharacterized component of anaerobic dehydrogenases [General function prediction only].	0.000645393
NC_021834.1\|WP_002851155.1\|661382_662420_-\|ATP-binding-protein	gnl\|CDD\|224292	COG1373, COG1373, Predicted ATPase (AAA+ superfamily) [General function prediction only].	1.54942e-34
NC_021834.1\|WP_002851407.1\|660654_661386_+\|mannosyl-glycoprotein-endo-beta-N-acetylglucosamidase	gnl\|CDD\|225539	COG2992, Bax, Uncharacterized FlgJ-related protein [General function prediction only].	2.12305e-102
NC_021834.1\|WP_002858888.1\|647341_648490_-\|carboxynorspermidine-decarboxylase	gnl\|CDD\|273414	TIGR01047, carboxynorspermidine_decarboxylase, carboxynorspermidine decarboxylase. This protein is related to diaminopimelate decarboxylase. It is the last enzyme in norspermidine biosynthesis by an unusual pathway shown in Vibrio alginolyticus. [Central intermediary metabolism, Polyamine biosynthesis].	0
NC_021834.1\|WP_002855462.1\|663060_664281_-\|glucose-6-phosphate-isomerase	gnl\|CDD\|235168	PRK03868, PRK03868, glucose-6-phosphate isomerase; Provisional.	0
NC_021834.1\|WP_002779488.1\|650156_650378_+\|MoaD/ThiS-family-protein	gnl\|CDD\|224888	COG1977, MoaD, Molybdopterin converting factor, small subunit [Coenzyme metabolism].	1.67964e-11
NC_021834.1\|WP_002851173.1\|659930_660680_+\|diaminopimelate-epimerase	gnl\|CDD\|234768	PRK00450, dapF, diaminopimelate epimerase; Provisional.	4.97072e-93
NC_021834.1\|WP_020836907.1\|650828_652019_+\|molybdopterin-molybdotransferase-MoeA	gnl\|CDD\|223380	COG0303, MoeA, Molybdopterin biosynthesis enzyme [Coenzyme metabolism].	4.09155e-141
NC_021834.1\|WP_002851264.1\|642716_643358_-\|4Fe-4S-dicluster-domain-containing-protein	gnl\|CDD\|319893	cd16371, DMSOR_beta_like, uncharacterized subfamily of DMSO Reductase beta subunit family. This family consists of the small beta iron-sulfur (FeS) subunit of the DMSO Reductase (DMSOR) family. Members of this family also contain a large, periplasmic molybdenum-containing alpha subunit and may have a small gamma subunit as well. Examples of heterodimeric members with alpha and beta subunits include arsenite oxidase, and tungsten-containing formate dehydrogenase (FDH-T) while heterotrimeric members containing alpha, beta, and gamma subunits include formate dehydrogenase-N (FDH-N), and nitrate reductase (NarGHI). The beta subunit contains four Fe4/S4 and/or Fe3/S4 clusters which transfer the electrons from the alpha subunit to a hydrophobic integral membrane protein, presumably a cytochrome containing two b-type heme groups. The reducing equivalents are then transferred to menaquinone, which finally reduces the electron-accepting enzyme system.	6.18245e-57
NC_021834.1\|WP_002851174.1\|641787_642720_-\|formate-dehydrogenase-subunit-gamma	gnl\|CDD\|130645	TIGR01583, Formate_dehydrogenase_cytochrome_b556_subunit, formate dehydrogenase, gamma subunit. This model represents the gamma chain of the gamma proteobacteria (and Aquifex aolicus) formate dehydrogenase. This subunit is integral to the cytoplasmic membrane, consisting of 4 transmembrane helices, and receives electrons from the beta subunit. The entire E. coli formate dehydrogenase N (nitrate-inducible form) has been crystallized. The gamma subunit contains two cytochromes, heme b(P) and heme b(C) near the periplasmic and cytoplasmic sides of the membrane respectively. The electron acceptor quinone binds at the cytoplasmic heme histidine ligand. NiFe-hydrogenase and thiosulfate reductase contain homologous gamma subunits, and these can be found scoring in the noise of this model. [Energy metabolism, Anaerobic, Energy metabolism, Electron transport].	4.78832e-90
NC_021834.1\|WP_020836910.1\|653695_656650_-\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	gnl\|CDD\|226044	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms].	0
NC_021834.1\|WP_002858889.1\|650378_650825_+\|molybdenum-cofactor-biosynthesis-protein-MoaE	gnl\|CDD\|223391	COG0314, MoaE, Molybdopterin converting factor, large subunit [Coenzyme metabolism].	5.09823e-44
NC_021834.1\|WP_002803269.1\|646158_646350_-\|twin-arginine-translocation-signal-domain-containing-protein	gnl\|CDD\|236534	PRK09476, napG, quinol dehydrogenase periplasmic component; Provisional.	0.00537271
NC_021834.1\|WP_002851523.1\|659328_659934_+\|dephospho-CoA-kinase	gnl\|CDD\|234620	PRK00081, coaE, dephospho-CoA kinase; Reviewed.	5.24929e-70
NC_021834.1\|WP_079263690.1\|643354_646159_-\|formate-dehydrogenase-subunit-alpha	gnl\|CDD\|239153	cd02752, MopB_Formate-Dh-Na-like, Formate dehydrogenase N, alpha subunit (Formate-Dh-Na) is a major component of nitrate respiration in bacteria such as in the E. coli formate dehydrogenase N (Fdh-N). Fdh-N is a membrane protein that is a complex of three different subunits and is the major electron donor to the nitrate respiratory chain. Also included in this CD is the Desulfovibrio gigas tungsten formate dehydrogenase, DgW-FDH. In contrast to Fdh-N, which is a functional heterotrimer, DgW-FDH is a heterodimer. The DgW-FDH complex is composed of a large subunit carrying the W active site and one [4Fe-4S] center, and a small subunit that harbors a series of three [4Fe-4S] clusters as well as a putative vacant binding site for a fourth cluster. The smaller subunit is not included in this alignment. Members of the MopB_Formate-Dh-Na-like CD belong to the molybdopterin_binding (MopB) superfamily of proteins.	0
NC_021834.1\|WP_020836908.1\|652384_652816_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	9.48237e-59
NC_021834.1\|WP_002851546.1\|662484_662934_-\|DNA-starvation/stationary-phase-protection-protein	gnl\|CDD\|223854	COG0783, Dps, DNA-binding ferritin-like protein (oxidative damage protectant) [Inorganic ion transport and metabolism].	5.92874e-51
NC_021834.1\|WP_002874968.1\|648613_650155_+\|multicopper-oxidase-CueO	gnl\|CDD\|225043	COG2132, SufI, Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism].	1.83609e-119
NC_021834.1\|WP_002851320.1\|658278_659268_-\|phosphoribosylformylglycinamidine-cyclo-ligase	gnl\|CDD\|235439	PRK05385, PRK05385, phosphoribosylaminoimidazole synthetase; Provisional.	0

>NC_021834.1|WP_020836907.1|650828_652019_+|molybdopterin-molybdotransferase-MoeA
MLMSYEESLKILHSHIKTYEKIEKIALTECLGRILAQDIKAPKNQPEFPTSAMDGYAIKFEDQDKPLKILGITPAGTMPQFSVQNGTCVKTFTGSLMSEGSDTLVPVENIRIENDTLFIEKKVPQAFAVRAVGENYKKDEILLKKGTKLNYSEIALLAELGFFHISVFIKPIVGVLSSGSEIKDLGEALENPAQIRSSNHIAIANLAKNLNCDTRVFPLLKDDEKATFSTLESALQSCDILVTTGGVSMGDFDFLKKAIKEYEIIIDKADIKPGRHIKIAKANEKFIIALPGFPYSAMVMFNLYAREILNSWLLQPKDYICKAFLQGSYKKKTPYLEFVACNIKFENGRILANLEGKKEGSSAIINNLNNKAALMVVPKECEILENESLVDIIFMP
>NC_021834.1|WP_002858889.1|650378_650825_+|molybdenum-cofactor-biosynthesis-protein-MoaE
MKHFTLYQGSLDIPKIYSQWYEFSKDKNCGALLTFCGIVREEGGIEALSFDIYEPLLKKWFDEWQKRVDFDGISLLFAHSIGDVAIHESSYFAGILSKQRKLGLKLLNEFVEDFKASAPIWKYDVINKERIYAKERSTKLCGAGLLKG
>NC_021834.1|WP_002779488.1|650156_650378_+|MoaD/ThiS-family-protein
MVKVEFLGPINKENLELEVKNLKELKEILQKDESLKEWLELCAVSLNDEIIFDENTKLKDGDKIALLPPVCGG
>NC_021834.1|WP_002874968.1|648613_650155_+|multicopper-oxidase-CueO
MNRRNFLKFNALTLASMGVAYANPMHDMHSMHKNHSINHDLDTSFINFAPKNLKLLDPKQFPQGEILKALPLLKNESKEKNIFRATLEIKENHIELIKGKKTLFYTYNGLVPAPKIEVFEGDKLEILVKNKLKEATTIHWHGVPVPPDQDGSPHDPILAGEERIYRFKIPQDSAGTYWYHPHPHYTASKQVFMGLAGAFVIKAKKDALSHLKERDLMISDLRLDENAQIPNNNLNDWLNGREGEFVLINGQFKPQIKLATNERIRIYNATAARYLNLRIQGAKFILVGTDGGLIEKTIYKEELFLSPASRAEVLIDAPKDGNFKLESAYYDRDKMMVKEEPNTLFLANISLKKENVELPKNLKIFKPSEEPKEFKEIIMSEDHMQMHGMMGKSESELKIALASMFLINGKSYDLKRIDLSSKLGVVEDWIVINKSHMDHPFHIHGTQFELISSKLNGKVQKAEFRAFRDTINVRPNEELRLRMKQDFKGLRMYHCHILEHEDLGMMGNLEVKE
>NC_021834.1|WP_002858888.1|647341_648490_-|carboxynorspermidine-decarboxylase
MFYEKIQTPAYILEEDKLRKNCELLASVGEKSGAKVLLALKGFAFSGAMKIVGEYLKGCTCSGLWEAKFAKEYMDKEIHTYSPAFKEDEIGEIASLSHHIVFNSLAQFHKFQAKTQKNSLGLRCNVEFSLAPKELYNPCGRYSRLGIRAKDFENVDLNAIEGLHFHALCEESADALEAVLKAFEEKFGKWIGQMKWVNFGGGHHITKKGYDVEKLIALCKNFSDKYGVQVYLEPGEAVGWQTGNLVASVVDIIENEKQIAILDTSSEAHMPDTIIMPYTSEVLNARILATRENEKISDLKESEFSYLLTGNTCLAGDVMGEYAFDKKLKIGDKIVFLDQIHYTIVKNTTFNGIRLPNLMLLDRKNELQMIREFSYKDYSLRN
>NC_021834.1|WP_020836906.1|646324_647038_-|hypothetical-protein
MGALMDLEKLRLARSLYYQYLGELFVFSFSEERLSKLQEYLKTMQECLFDENLKSNFDILLKHLDDENSIQAFFKEYDLLFLSLKNSIPTTFSYIEEGFENSNPLLCVRQILVKSKIRRNEKFFKESEDSVGFCLLLMSEFLRQNEDDLAKELFEKVINKSIDEFLGDVFINKNANLYKEIASIASAFMEFERLCFEVEKPAKINSKKVQNDLSRSEFLRREANKQRRTREKSQGIS
>NC_021834.1|WP_002803269.1|646158_646350_-|twin-arginine-translocation-signal-domain-containing-protein
MKNRREFLKKSAFALGAAGVLGSTTLALAKDEERKDLVKGKSKKKEVLFQRSANWEKYYIKAE
>NC_021834.1|WP_079263690.1|643354_646159_-|formate-dehydrogenase-subunit-alpha
MSSVGENIKLTRRSFLKMAALSSLATPLLARSETLREASADELKEAYEGSKKVKTVCTACSVGCGIIAEVQNGVWVRQEIAQDHPVSSGGHCCKGSDMIDMVRSHVRLKYPMKKENGEWKRISYEQALSEIGEKLAAYRKENPESVMFLGSAKLNNEQAYYIRKFAAFFGTNNVDHQARIUHSATVAGVANTFGYGAMTNHLGDIQRSKCIIIIGANPAVNHPVGFRHFLKAKEKGAKLIVVDPRFTKSAAKADIYARIRPGTDIAFMYGMLKIIFDEGLEDTKYLDERVFGIDKIREEAAKWTAEEVENVTGISKELLVQITHEVAKNKPTTLIWAMGLTQHTVGTSNTRLAPIVQMVLGNIGKFGGGVNILRGHDNVQGASDMACLSENLPGYYPLNEATWRYYAKIWGVDYEWLLGNFVSKDWMHKTGLSLARWWAAALNGKDGNDAIDNAGTPLKALVVMGNGITSTAQQVKVKEGLEALELLVLADPFVNEAGIIAERKDGIYLLPAATQFETSGSVTATNRSGQWRFKVVDPLYESMEDQEILFELAKKLGFYEDFTKTLRDEKGEIVWPENATREIAKAVRSIGLNGWSPERLKKHTLYWDKFDEVTLEGKDEVAGEYYGLPWPCWSDKHPGSPVLYNTDIEVAKGGMGFRNNFGLEYEGESLLAKNAPLNSPIDTGYPQITKDNIEKVLGITLSAQEKEKMGSTWSYDDSNIIATKCIEKGIVPYGNAKARAVVWTFKDKIPLHREPLHSPRNDLVQKYPSFEDQKALYRVDTKFVSVQQAKDYSKEFPLNLVTARLVNLNGAGMENRASMYLTRLTPEMFCEINPQLAKEQDIKAGDMIWVHSPEGTKIHVRVKVNPGVAKDMIFLPFHFTGVMQGVDLTHNFPEGTKPYASGESANTVTNYGYDIMCQIPETKGGLCRISKDGK
>NC_021834.1|WP_002851264.1|642716_643358_-|4Fe-4S-dicluster-domain-containing-protein
MSKVNFANLEKERLKFFCDNERCIDCNGCAVACDEAHELPIHIRRRRVITLNEGIQGKEVSTSISCMHCDDAPCSIVCPVDCFYIRADGIVLHDKEICIGCGYCLYACPFGAPQFPKDSVFGNKGIMDKCTMCAGGPEATNSEKERELYGQNRIAEGKVPVCAAMCSTKALLVGESSKIEEIYHNRLMNRNYGIPNPSESLEWKIAYTGKERL
>NC_021834.1|WP_002851174.1|641787_642720_-|formate-dehydrogenase-subunit-gamma
MRKVFVTLLLSVVSLFAYGSERMGQDTQIWDFHRITNIPNYDTFGKLWTTLQGEYIATIALIAVIAVLSAFALHYMVIGPKQFSHDGKKIYAFTLFERLFHFIAAISWVILVPTGFVMMFGEVFGGGVFVRVCKNLHAFATILFIISIIPMFLCWIKRMLPASYDIRWMMIVGGYLSKIKRPVPAGKFNFGQKSWYYIAVFGGFLMIITGGFMYFLDFNSTAIQGLFGLTQIELLRISAIVHNFLGIVCAVFFGVHIYMAVFAIKGSIHSMISGYKEEEEVYILHSYWYKELSNKKQIEPSFSYDPNVKI
>NC_021834.1|WP_020836908.1|652384_652816_-|CRISPR-associated-endonuclease-Cas2
MIEDKFMRVLLMFDVPTKSKKEQKLAGKFRNNLIKLGYFMLQFSVYMRICKGLSSAKSSIENVKKILPPYGNVRALIITEKQFDKMELLLGGIVFNEKVNNETNLTLFDIDSHGEFKYKNSNNEEIQINKKQEKYHQQNLFEF
>NC_021834.1|WP_020836909.1|652808_653699_-|type-II-CRISPR-associated-endonuclease-Cas1
MSYDEAFKTLLISSNAKLNLELNHLVIKQDENIAKLFLKDINIIVLESLQVSISSALFNAFARHKIILLTCDETHSINGVFTPFLGHFQSAKIAKEQMNVSAQKKAILWQKIIKNKILNQAFILKKYNKIEQSNELINLAKKVSLNDSKNIEAVAAALYFKTLFGTSFSRDELCFENSALNYGYAIMRACIIRAVCISGLLPWLGIKHDNIYNSFALCDDLIEVFRASVDDCVLKLKGESEFLSKDDKRALIGNLQSKINFDGQNYPLNRAINHYVANFKNALLYEDELKIVKFDD
>NC_021834.1|WP_020836910.1|653695_656650_-|type-II-CRISPR-RNA-guided-endonuclease-Cas9
MARILAFDIGISSIGWAFSENDELKDCGVRIFTKAENPKTGESLALPRRLARSARKRLARRKARLNHLKHLIANEFKLNYEDYQSFDESLAKAYKGSLISPYELRFRALNELLSKQDFARVILHIAKRRGYDDIKNSDDKEKGAILKAIKQNEEKLANYQSVGEYLYKEYFQKFKENSKEFTNVRNKKESYERCIAQSFLKDELKLIFKKQREFGFSFSKKFEEEVLSVAFYKRALKDFSHLVGNCSFFTDEKRAPKNSPLAFMFVALTRIINLLNNLKNTEGILYTKDDLNALLNEVLKNGTLTYKQTKKLLGLSDDYEFKGEKGTYFIEFKKYKEFIKALGDHSLSQDDLNEIAKDITLIKDEIKLKKALAKYDLNQNQIDSLSKLEFKDHLNISFKALKLITPLMLEGKKYDEACNELNLKVAINEDKKDFLPAFNETYYKDEVTNPVVLRAIKEYRKVLNALLKKYGKVHKINIELAREVGKNYSQRAKIEKEQNENYKAKKDAELECEKLGLKINSKNILKLRLFKEQKEFCAYSGEKIKISDLQDEKMLEIDHIYPYSRSFDDSYMNKVLVFTKQNQEKLNQTPFEAFGNDSAKWQKIEVLAKNLPTKKQKRILDKNYKDKEQKDFKDRNLNDTRYIARLVLNYTKDYLDFLPLSDDENTKLNDTQKGSKVHVEAKSGMLTSALRHTWGFSAKDRNNHLHHAIDAVIIAYANNSIVKAFSDFKKEQESNSAELYAKKISELDYKNKRKFFEPFSGFRQKVLDKIDEIFVSKPERKKPSGALHEETFRKEEEFYQSYGGKEGVLKALELGKIRKVNGKIVKNGDMFRVDIFKHKKTNKFYAVPIYTMDFALKVLPNKAVARSKKGEIKDWILMDENYEFCFSLYKDSLILIQTKDMQEPEFVYYNAFTSSTVSLIVSKHDNKFETLSKNQKILFKNANEKEVIAKSIGIQNLKVFEKYIVSALGEVTKAEFRQREGFKK
>NC_021834.1|WP_002851320.1|658278_659268_-|phosphoribosylformylglycinamidine-cyclo-ligase
MKISYEDAGVSIDNGNTFVEAIKPLVKETFNDNVVGGIGSFAGAFRMPSGFKKPVILGATDGVGTKLRLAIDAKKYDTIGQDLVAMCVNDLICNFATPLFFLDYYATAKLEVEVAKAVVSGIAKGCKMANCALIGGETAEMPGMYAKDDFDLAGFAVGMAEEDEIDRSKFVKNGDILLALSSSGLHSNGYSLARKVLFESLKLKFDDKIEGKNLIDILLEPTRIYVRDFLTLKPYISALAHITGGGLVENLPRVLPRGMGATIRKHHLKTPEIFYTIGQAVEESEMYRSFNMGVGLVMVVDPSNVSKILENSDAFIIGEICINEGIVLE
>NC_021834.1|WP_002851523.1|659328_659934_+|dephospho-CoA-kinase
MKNAFFVTASIACGKSTFIEIANSLGFKSISADKIAHKILDENALELEKIFSPFSLKNLLKKEKKIDRKILGEIVFNNKEAKKILENFTHPKIRAKILEQMQILDKENKAFFVEIPLFFESGAYENLGKVIVIYTPKELSLKRIMQRDKLSLEAAKARLDSQIDIEEKLKKADFIIKNTNSYADFRQECVKVIQEISKGNM
>NC_021834.1|WP_002851173.1|659930_660680_+|diaminopimelate-epimerase
MKFYKYCASGNDFVITNADRKEDRSALAKELCNRYEGIGADGFIVILPHEKYDFEWEFYNNDGSRAAMCGNGSRAAAHFAHHINKINPNMSFLTGAGIIKAKVNQDKVEVSLGKIKSVQNTFEELGKTWQLCNTGVPHLVHFCQNLDEFDTMLCQKMRQKYNANVNFVKILDENHLKVRTYERGVEDETLACGTGMGACFYLAFLNKKVQNKVKITPKSGEEVGFAYKNEELFFEGKVKYCFEANYNFF
>NC_021834.1|WP_002851407.1|660654_661386_+|mannosyl-glycoprotein-endo-beta-N-acetylglucosamidase
MKPIIIFFSLFLIPLFADDLKSGFGEEYYKLDIDQKRQIFFIKMNEMFDQSFKKIEQERAFIEAFFKDAYKTGFRTSNQINLEKLITIKNKYRIENLYDFAEYKKRIQKIPKSMGIAQALVESATGTSRFAREANNLFGEWTWGEKGLIPDLRHPDKKHKIKIFDSLQDSVDSYVLNLNRHFAYEKFRDARAKFESEGKEITGLEAIKTLDSYSERKGYYINLITKIIKRYNLEKYDTNSNNT
>NC_021834.1|WP_002851155.1|661382_662420_-|ATP-binding-protein
MKVLNFFYENHPKFEVSYERKNQISKPNIIIKGPRFCGKKTLIFNFLSQFKASEILFLDLYDTRFEKQSLERLADFLNENLQIKILCLYNLDFIPNLEKINIPIILSTNIKDLNVNGFEELELDYFDFEEFISVSKKNLPINNLVGLFLQSGRSKFGEKNILLRQSFTLLELEILKYLALNLGQQISISKIFIELKKRLKTSKDSVYQAIKKLENTYVIYTLKHDEKKLQKIYFKDFGLRNNLCISKDFSHLFENLVLSELFKFKEEFFYNKYFNFYSQISKIAYISSPTLDIDLIKLRAKKILPKALELGIFHVIFITLSSEDNFFEQGVKFEVISFDKFSLGF
>NC_021834.1|WP_002851546.1|662484_662934_-|DNA-starvation/stationary-phase-protection-protein
MSVTKQLLQMQADAHHLWVKFHNYHWNVKGLQFFSIHEYTEKAYEEMAELFDSCAERVLQLGEKAITCQKVLMENAKSPKVAKDCFTPLEVIELIKQDYEYLLAEFKKLNEAAEKESDTTTAAFAQENIAKYEKSLWMIGATLQGACKM
>NC_021834.1|WP_002855462.1|663060_664281_-|glucose-6-phosphate-isomerase
MLNNTLFFKQSEIHTISSYANRINDEVKSGDIGYYHLIDTSLNLIDESLQFIQDKEYVKNIVLVGMGGSSCGVKALRDMLFNEKSNQRELFILDNTSSHSFNKTLEKIKLEESLFLIISKTGSTIEVVSLFKLLIEHFKLDMQELKKYFVFITDKDSKLHQEGENLGIKCFFIPANVGGRFSILSAVGIVPLCFCGYNAKALLEGAKACFEDFFTHKKDEILQKAYHYCTHKNANINVLFSYSDAFKGFNEWYIQLIAESLGKKQGYKRIGLTPIALIGARDQHSFLQLIMDGPKNKTVTFLKIKDAQKAPIIPDIHFKFLDSLSNKVNLHELLNAQCDATMHALIAENLSVDVIELEKLDAWHAGYLMYYYELFTSTCGVMLGINTYDQPGVEVGKLILKNILNS

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NC_021834_1	1.1\|652175\|31\|NC_021834\|CRISPRCasFinder	652175-652205	31	MN530981	Campylobacter phage DA10, complete genome	1112-1142	3	0.903
NC_021834_1	1.1\|652175\|31\|NC_021834\|CRISPRCasFinder	652175-652205	31	MF417908	Uncultured Caudovirales phage clone 10S_1, partial genome	6848-6878	8	0.742
NC_021834_1	1.1\|652175\|31\|NC_021834\|CRISPRCasFinder	652175-652205	31	AP014375	Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S42-C56, * SEQUENCING IN PROGRESS *	28285-28315	8	0.742
NC_021834_1	1.1\|652175\|31\|NC_021834\|CRISPRCasFinder	652175-652205	31	MN044033	Klebsiella phage Marfa, complete genome	55493-55523	8	0.742
NC_021834_1	1.1\|652175\|31\|NC_021834\|CRISPRCasFinder	652175-652205	31	MN395284	Klebsiella phage PhiKpNIH-6, complete genome	87237-87267	8	0.742
NC_021834_1	1.1\|652175\|31\|NC_021834\|CRISPRCasFinder	652175-652205	31	MN106245	Klebsiella phage EI, complete genome	57282-57312	8	0.742
NC_021834_1	1.1\|652175\|31\|NC_021834\|CRISPRCasFinder	652175-652205	31	NC_048694	Klebsiella phage vB_Kpn_F48, complete genome	8957-8987	8	0.742
NC_021834_1	1.1\|652175\|31\|NC_021834\|CRISPRCasFinder	652175-652205	31	MN434092	Klebsiella phage AmPh_EK29, complete genome	8961-8991	8	0.742
NC_021834_1	1.1\|652175\|31\|NC_021834\|CRISPRCasFinder	652175-652205	31	MN781108	Klebsiella phage vB_Kpn_P545, complete genome	8729-8759	8	0.742
NC_021834_1	1.1\|652175\|31\|NC_021834\|CRISPRCasFinder	652175-652205	31	MN013081	Klebsiella phage vB_KpnM_Potts1, complete genome	8540-8570	8	0.742
NC_021834_1	1.1\|652175\|31\|NC_021834\|CRISPRCasFinder	652175-652205	31	NC_019909	Yersinia phage phiR1-RT complete genome	65680-65710	9	0.71
NC_021834_1	1.1\|652175\|31\|NC_021834\|CRISPRCasFinder	652175-652205	31	NC_028820	Yersinia phage vB_YenM_TG1, complete genome	60594-60624	9	0.71

1. spacer 1.1|652175|31|NC_021834|CRISPRCasFinder matches to MN530981 (Campylobacter phage DA10, complete genome) position: , mismatch: 3, identity: 0.903

ctgttttattgtcaataacgcctttactaag	CRISPR spacer
ttgttttattgtcaataacacctttactaac	Protospacer
.******************.**********

2. spacer 1.1|652175|31|NC_021834|CRISPRCasFinder matches to MF417908 (Uncultured Caudovirales phage clone 10S_1, partial genome) position: , mismatch: 8, identity: 0.742

ctgttttattgtcaataacgcctttactaag	CRISPR spacer
taattgtattttcaataacgcctttacctcg	Protospacer
. .** **** ****************.  *

3. spacer 1.1|652175|31|NC_021834|CRISPRCasFinder matches to AP014375 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S42-C56, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 8, identity: 0.742

ctgttttattgtcaataacgcctttactaag	CRISPR spacer
gtgttttatggtcaataaagccttgttttac	Protospacer
 ******** ******** *****  .* *

4. spacer 1.1|652175|31|NC_021834|CRISPRCasFinder matches to MN044033 (Klebsiella phage Marfa, complete genome) position: , mismatch: 8, identity: 0.742

ctgttttattgtcaataacgcctttactaag	CRISPR spacer
ccaatttattgtcaataacccatttaccagc	Protospacer
*.. *************** * *****.*.

5. spacer 1.1|652175|31|NC_021834|CRISPRCasFinder matches to MN395284 (Klebsiella phage PhiKpNIH-6, complete genome) position: , mismatch: 8, identity: 0.742

ctgttttattgtcaataacgcctttactaag	CRISPR spacer
ccaatttattgtcaataacccatttaccagc	Protospacer
*.. *************** * *****.*.

6. spacer 1.1|652175|31|NC_021834|CRISPRCasFinder matches to MN106245 (Klebsiella phage EI, complete genome) position: , mismatch: 8, identity: 0.742

ctgttttattgtcaataacgcctttactaag	CRISPR spacer
ccaatttattgtcaataacccatttaccagc	Protospacer
*.. *************** * *****.*.

7. spacer 1.1|652175|31|NC_021834|CRISPRCasFinder matches to NC_048694 (Klebsiella phage vB_Kpn_F48, complete genome) position: , mismatch: 8, identity: 0.742

ctgttttattgtcaataacgcctttactaag	CRISPR spacer
ccaatttattgtcaataacccatttaccagc	Protospacer
*.. *************** * *****.*.

8. spacer 1.1|652175|31|NC_021834|CRISPRCasFinder matches to MN434092 (Klebsiella phage AmPh_EK29, complete genome) position: , mismatch: 8, identity: 0.742

ctgttttattgtcaataacgcctttactaag	CRISPR spacer
ccaatttattgtcaataacccatttaccagc	Protospacer
*.. *************** * *****.*.

9. spacer 1.1|652175|31|NC_021834|CRISPRCasFinder matches to MN781108 (Klebsiella phage vB_Kpn_P545, complete genome) position: , mismatch: 8, identity: 0.742

ctgttttattgtcaataacgcctttactaag	CRISPR spacer
ccaatttattgtcaataacccatttaccagc	Protospacer
*.. *************** * *****.*.

10. spacer 1.1|652175|31|NC_021834|CRISPRCasFinder matches to MN013081 (Klebsiella phage vB_KpnM_Potts1, complete genome) position: , mismatch: 8, identity: 0.742

ctgttttattgtcaataacgcctttactaag	CRISPR spacer
ccaatttattgtcaataacccatttaccagc	Protospacer
*.. *************** * *****.*.

11. spacer 1.1|652175|31|NC_021834|CRISPRCasFinder matches to NC_019909 (Yersinia phage phiR1-RT complete genome) position: , mismatch: 9, identity: 0.71

ctgttttattgtcaataacgcctttactaag	CRISPR spacer
ataatttattgtcaataacccatttaccttt	Protospacer
 *. *************** * *****.

12. spacer 1.1|652175|31|NC_021834|CRISPRCasFinder matches to NC_028820 (Yersinia phage vB_YenM_TG1, complete genome) position: , mismatch: 9, identity: 0.71

ctgttttattgtcaataacgcctttactaag	CRISPR spacer
ataatttattgtcaataacccatttaccttt	Protospacer
 *. *************** * *****.

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

87688 : 191413

105

Campylobacter_phage(19.44%)

plate,head,terminase,tRNA,tail,protease

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002853058.1\|87688_88207_-\|protease	rhomboid family intramembrane serine protease	NA	NA	NA	NA
WP_002853001.1\|88305_88722_+	PepSY-like domain-containing protein	NA	NA	NA	NA
WP_020836797.1\|88730_90347_-	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	R4TQL5	Phaeocystis_globosa_virus	2.0e-69	43.6
WP_002868672.1\|90350_91601_-\|tRNA	tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase MtaB	NA	NA	NA	NA
WP_002868671.1\|91597_93169_-	mechanosensitive ion channel	NA	NA	NA	NA
WP_002868670.1\|93165_94221_-	3-dehydroquinate synthase	A0A0P0C619	Ostreococcus_mediterraneus_virus	1.3e-27	34.5
WP_002856550.1\|94266_95667_-	potassium transporter TrkA	NA	NA	NA	NA
WP_002924299.1\|95696_96818_+\|tRNA	tRNA guanosine(34) transglycosylase Tgt	A0A1B1IVQ4	uncultured_Mediterranean_phage	6.4e-70	38.8
WP_002853764.1\|96819_97587_+	magnesium transporter CorA family protein	NA	NA	NA	NA
WP_024088204.1\|97718_98168_-	hypothetical protein	NA	NA	NA	NA
WP_002875006.1\|98183_101429_-	cytochrome c biogenesis protein	NA	NA	NA	NA
WP_002852965.1\|101446_102142_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	5.4e-11	24.9
WP_002853599.1\|102128_102899_-	ABC transporter ATP-binding protein	M1HRF1	Paramecium_bursaria_Chlorella_virus	2.3e-10	26.1
WP_002854133.1\|102895_103948_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
WP_020836798.1\|103947_104844_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
WP_020836799.1\|104862_105972_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_002853016.1\|105993_107109_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_002853959.1\|107139_107574_-	c-type cytochrome	NA	NA	NA	NA
WP_002853004.1\|107582_107774_-	mini-MOMP protein	NA	NA	NA	NA
WP_002852919.1\|107825_108332_-	YqhA family protein	NA	NA	NA	NA
WP_002875384.1\|108340_109372_-	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_002875385.1\|109371_110673_-	fla regulon two-component system response regulator	NA	NA	NA	NA
WP_002871768.1\|110729_111179_-	hypothetical protein	NA	NA	NA	NA
WP_002874042.1\|111154_111670_-	flagellar assembly lipoprotein FlgP	NA	NA	NA	NA
WP_041176893.1\|111746_114326_-	DNA topoisomerase (ATP-hydrolyzing) subunit A	G3M9Z5	Bacillus_virus	1.5e-98	32.0
WP_002852941.1\|114939_115584_-	hypothetical protein	NA	NA	NA	NA
WP_002868661.1\|115660_117457_-	elongation factor 4	E4ZFJ7	Streptococcus_phage	7.1e-23	24.5
WP_002871771.1\|117582_118857_+	multidrug efflux RND transporter outer membrane subunit CmeD	NA	NA	NA	NA
WP_002858463.1\|118853_119594_+	multidrug efflux RND transporter periplasmic adaptor subunit CmeE	NA	NA	NA	NA
WP_002875388.1\|119596_122614_+	multidrug efflux RND transporter permease subunit CmeF	S5VTK5	Leptospira_phage	2.3e-66	24.6
WP_002852998.1\|122637_123444_-	adenylosuccinate lyase	NA	NA	NA	NA
WP_002853863.1\|123444_124164_-	arginyltransferase	NA	NA	NA	NA
WP_002853000.1\|124163_124415_-	hypothetical protein	NA	NA	NA	NA
WP_002856595.1\|124418_125864_-	acetyl-CoA carboxylase subunit A	NA	NA	NA	NA
WP_002853553.1\|126003_127167_+	putative lipid II flippase FtsW	NA	NA	NA	NA
WP_002871773.1\|127163_128192_+	undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase	NA	NA	NA	NA
WP_002852987.1\|129332_130184_-	ATP-binding protein	NA	NA	NA	NA
WP_002852985.1\|130246_131137_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_002852949.1\|131133_131739_-	thiamine phosphate synthase	NA	NA	NA	NA
WP_002852974.1\|131728_132874_-	2-iminoacetate synthase ThiH	NA	NA	NA	NA
WP_002869461.1\|132876_133653_-	thiazole synthase	NA	NA	NA	NA
WP_014516791.1\|133655_134459_-	thiamine biosynthesis protein ThiF	A0A1V0SIK8	Klosneuvirus	4.0e-10	32.4
WP_002853007.1\|134455_134647_-	sulfur carrier protein ThiS	NA	NA	NA	NA
WP_002871776.1\|134656_135754_-	succinyl-diaminopimelate desuccinylase	NA	NA	NA	NA
WP_002779102.1\|135757_136357_-	LysE family transporter	NA	NA	NA	NA
WP_002864286.1\|136349_137051_-	NAD-dependent protein deacylase	A0A023MHA7	Escherichia_phage	1.6e-31	42.8
WP_020836800.1\|137093_139508_-	N-6 DNA methylase	A0A1V0SLK8	Klosneuvirus	6.7e-08	30.1
WP_002875392.1\|139678_140728_+	DNA cytosine methyltransferase	A0A0R6PG08	Moraxella_phage	5.3e-103	51.8
WP_002875393.1\|140720_142751_+	hypothetical protein	NA	NA	NA	NA
WP_002870152.1\|142816_143785_-\|tail	phage tail protein	A0A219Y9Y2	Aeromonas_phage	4.3e-14	26.8
WP_002789964.1\|143778_143970_-\|tail	tail protein	NA	NA	NA	NA
WP_002875691.1\|143962_144337_-\|tail	tail protein	NA	NA	NA	NA
WP_002870149.1\|146331_146562_+	hypothetical protein	NA	NA	NA	NA
WP_002789979.1\|146669_146906_-\|tail	phage tail assembly protein	NA	NA	NA	NA
WP_002789981.1\|146916_147432_-\|tail	tail protein	Q858V0	Yersinia_virus	2.6e-10	26.3
WP_020836802.1\|147578_148769_-\|tail	phage tail sheath family protein	A7YG77	Campylobacter_phage	2.3e-195	98.7
WP_002888062.1\|149895_150267_-	DUF1353 domain-containing protein	A7YGF6	Campylobacter_phage	5.7e-68	100.0
WP_002924980.1\|150263_150770_-	DUF4376 domain-containing protein	A7YGA6	Campylobacter_phage	5.7e-87	99.4
WP_020836803.1\|150794_151826_-\|tail	phage tail protein	A7YGK4	Campylobacter_phage	2.4e-188	99.7
WP_020836804.1\|151825_152446_-\|tail	phage tail protein I	A7YH02	Campylobacter_phage	2.8e-59	96.6
WP_020836805.1\|152543_153710_-\|plate	baseplate assembly protein	Q8H9N3	Vibrio_phage	3.9e-14	24.6
WP_020836806.1\|153706_153997_-\|plate	phage baseplate protein	Q8H9N4	Vibrio_phage	2.1e-09	39.2
WP_020836807.1\|153993_154626_-\|plate	phage baseplate assembly protein V	V5YUM9	Pseudomonas_phage	2.3e-08	34.6
WP_020836808.1\|154622_155087_-	DUF1804 family protein	NA	NA	NA	NA
WP_020836809.1\|155217_156258_+	hypothetical protein	NA	NA	NA	NA
WP_002790002.1\|156257_157145_+\|head	head protein	A0A2K9VH18	Faecalibacterium_phage	3.5e-63	43.7
WP_019108985.1\|157144_157414_+	hypothetical protein	NA	NA	NA	NA
WP_002790896.1\|157410_157764_+	hypothetical protein	NA	NA	NA	NA
WP_002790266.1\|157760_158126_+	hypothetical protein	NA	NA	NA	NA
WP_002922136.1\|158115_158505_+	DUF882 domain-containing protein	A0A1X9Q0V8	Human_gokushovirus	2.2e-22	46.7
WP_002854893.1\|158515_158857_+	hypothetical protein	NA	NA	NA	NA
WP_002784496.1\|158853_159102_+	hypothetical protein	NA	NA	NA	NA
WP_002790261.1\|159213_159528_+	hypothetical protein	NA	NA	NA	NA
WP_002865465.1\|159617_161144_+\|terminase	phage terminase large subunit	A0A0M3LQB7	Mannheimia_phage	6.4e-49	31.1
WP_002909830.1\|161140_162523_+	DUF935 family protein	A0A0M3LRU4	Mannheimia_phage	8.2e-11	23.2
WP_020836810.1\|162639_163773_+	hypothetical protein	A0A1C6ZDL9	Pseudomonas_phage	1.5e-26	33.7
WP_002875718.1\|163911_164391_-	hypothetical protein	A7YGZ0	Campylobacter_phage	1.6e-06	29.7
WP_002875721.1\|164540_164729_-	hypothetical protein	NA	NA	NA	NA
WP_002875723.1\|164780_165209_-	hypothetical protein	NA	NA	NA	NA
WP_002875724.1\|165245_165440_-	hypothetical protein	NA	NA	NA	NA
WP_002875725.1\|165436_166075_-	antirepressor, BRO family protein	B5TRA6	Bacteroides_phage	2.3e-16	42.1
WP_002875726.1\|166215_166455_-	hypothetical protein	X2KQ78	Campylobacter_phage	2.7e-10	50.7
WP_020836811.1\|166553_167039_-	host-nuclease inhibitor protein Gam	A0A2K9VGT9	Faecalibacterium_phage	1.6e-17	33.3
WP_020836812.1\|167145_167487_-	hypothetical protein	NA	NA	NA	NA
WP_020836813.1\|167544_167730_-	hypothetical protein	NA	NA	NA	NA
WP_002790750.1\|167902_168094_-	DNA-directed RNA polymerase sigma-70 factor	NA	NA	NA	NA
WP_002874964.1\|168090_168948_-	AAA family ATPase	F6MII7	Haemophilus_phage	9.6e-26	29.2
WP_002790505.1\|171153_171354_-	hypothetical protein	NA	NA	NA	NA
WP_020836814.1\|171633_172323_+	helix-turn-helix domain-containing protein	S5FUZ3	Shigella_phage	7.7e-10	28.4
WP_079264495.1\|174223_176434_-	endonuclease MutS2	NA	NA	NA	NA
WP_002858449.1\|176423_176774_-	hypothetical protein	NA	NA	NA	NA
WP_072223327.1\|176766_178065_-	UDP-N-acetylmuramate--L-alanine ligase	NA	NA	NA	NA
WP_002923594.1\|178128_180102_-	LTA synthase family protein	NA	NA	NA	NA
WP_002871782.1\|180113_180890_-	carbon-nitrogen hydrolase family protein	NA	NA	NA	NA
WP_002853034.1\|180882_181056_-	exodeoxyribonuclease VII small subunit	NA	NA	NA	NA
WP_002871783.1\|181052_182510_-	IMP dehydrogenase	A0A1V0SHK8	Klosneuvirus	9.4e-98	40.7
WP_002855710.1\|182519_183881_-\|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA	NA	NA	NA	NA
WP_002869114.1\|183877_183988_-	membrane protein	NA	NA	NA	NA
WP_002918212.1\|183981_186735_-\|tRNA	isoleucine--tRNA ligase	A0A2P1ELB8	Moumouvirus	7.3e-67	24.9
WP_002853490.1\|186833_187922_+	CinA family protein	B5TK85	Pseudomonas_phage	2.7e-09	34.6
WP_002874957.1\|187933_188359_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_020836815.1\|188423_189044_+	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA
WP_002874954.1\|189043_189649_+	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA
WP_002853053.1\|189773_190310_+	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA
WP_002852927.1\|190306_191413_+\|protease	RIP metalloprotease RseP	NA	NA	NA	NA

DBSCAN-SWA_2

546456 : 560889

Synechococcus_phage(35.71%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_020836888.1\|546456_547593_-	class I SAM-dependent methyltransferase	M4QRS6	Synechococcus_phage	5.6e-66	41.3
WP_002924761.1\|547579_548311_-	hypothetical protein	E3SJ89	Synechococcus_phage	1.0e-15	26.6
WP_020836889.1\|548307_549831_-	capsular polysaccharide biosynthesis protein	B2ZYD9	Ralstonia_phage	9.0e-35	27.0
WP_002923537.1\|549827_550226_-	HAD-IIIC family phosphatase	A0A2K9L0P7	Tupanvirus	9.0e-11	42.0
WP_020836890.1\|550280_551006_-	LPS biosynthesis protein	M1H9H9	Acanthocystis_turfacea_Chlorella_virus	3.9e-52	50.0
WP_020836891.1\|551002_551332_-	hypothetical protein	NA	NA	NA	NA
WP_020836892.1\|551334_551670_-	nuclear transport factor 2 family protein	NA	NA	NA	NA
WP_020836893.1\|551662_552388_-	NTP transferase domain-containing protein	A0A1D8KNV9	Synechococcus_phage	1.2e-29	33.2
WP_002826458.1\|552381_553020_-	HAD family phosphatase	M1I080	Acanthocystis_turfacea_Chlorella_virus	2.2e-35	43.3
WP_002923523.1\|553747_554947_+	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_002895301.1\|554954_555623_-	NTP transferase domain-containing protein	A0A0G2Y8M0	Acanthamoeba_polyphaga_mimivirus	7.8e-07	26.6
WP_020836894.1\|555610_556216_-	D-sedoheptulose 7-phosphate isomerase	A0A067XQR2	Caulobacter_phage	8.3e-16	35.5
WP_002895298.1\|556203_557223_-	D-glycero-D-manno-heptose 7-phosphate kinase	A0A222YW25	Synechococcus_phage	2.1e-59	40.2
WP_002858841.1\|557298_558237_-	NAD-dependent epimerase/dehydratase	A0A0F7LC08	uncultured_marine_virus	7.9e-74	46.3
WP_002908397.1\|558260_559295_-	GDP-mannose 4,6-dehydratase	A0A222YY99	Synechococcus_phage	4.0e-143	72.5
WP_002895073.1\|559291_560344_-	NAD-dependent epimerase/dehydratase family protein	M1HKX0	Paramecium_bursaria_Chlorella_virus	9.2e-63	39.4
WP_002895072.1\|560343_560889_-	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A1D7XFA9	Escherichia_phage	2.2e-15	30.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage