CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NC_021837	Listeria monocytogenes, complete sequence	3 crisprs	WYL,cas3,DinG,csa3,cas9,cas1,cas2,csn2,DEDDh	4	25	8	2

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NC_021837_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_021837_1

10726-11203

Orphan

I-A

Consensus_repeat	Method
ATTTACATTTCACAATAAGTAACTAAAA	PILER-CR
ATTTACATTTCACAATAAGTAACTAAAA	CRISPRCasFinder
ATTTACATTTCACAATAAGTAACTAAAAC	CRT

7 spacers

The CRISPR arrays of NC_021837_1

>merge|NC_021837|1|10726-11203|PILER-CR,CRISPRCasFinder,CRT
ATTTACATTTCACAATAAGTAACTAAAACGAAATTGTAAAATCTATATCCGTTGATTCAACAAAATTTACATTTCACAATAAGTAACTAAAACTTAATTTGATAGTCATAATTTATTTCCTCCTATTTTATTTACATTTCACAATAAGTAACTAAAATATAGAAAGGAGTTGATACAGTGAAGGATGTTTTAGATTTACATTTCACAATAAGTAACTAAAACTTATAAACGACATTTTAGAAGCAGGAGTAGAAAAATTTACATTTCACAATAAGTAACTAAAACTTGTAACCCATCGCTGTCCCTTTGACAAAAATCGCATTTACATTTCACAATAAGTAACTAAAACGCTACATGCTTGATGTGCTTTACACAAAAGAGAGCAATTTACATTTCACAATAAGTAACTAAAACGCCATTTACAATCACCCTTCCGGAGTTTGATCTGTATTTACATTTCACAATAAGTAACTAAAAC

>NC_021837|1|1|10726-11202|PILER-CR
ATTTACATTTCACAATAAGTAACTAAAA	CGAAATTGTAAAATCTATATCCGTTGATTCAACAAA
ATTTACATTTCACAATAAGTAACTAAAA	CTTAATTTGATAGTCATAATTTATTTCCTCCTATTTT
ATTTACATTTCACAATAAGTAACTAAAA	TATAGAAAGGAGTTGATACAGTGAAGGATGTTTTAG
ATTTACATTTCACAATAAGTAACTAAAA	CTTATAAACGACATTTTAGAAGCAGGAGTAGAAAA
ATTTACATTTCACAATAAGTAACTAAAA	CTTGTAACCCATCGCTGTCCCTTTGACAAAAATCGC
ATTTACATTTCACAATAAGTAACTAAAA	CGCTACATGCTTGATGTGCTTTACACAAAAGAGAGCA
ATTTACATTTCACAATAAGTAACTAAAA	CGCCATTTACAATCACCCTTCCGGAGTTTGATCTGT
ATTTACATTTCACAATAAGTAACTAAAA

>NC_021837|1|1|10726-11202|CRISPRCasFinder
ATTTACATTTCACAATAAGTAACTAAAA	CGAAATTGTAAAATCTATATCCGTTGATTCAACAAA
ATTTACATTTCACAATAAGTAACTAAAA	CTTAATTTGATAGTCATAATTTATTTCCTCCTATTTT
ATTTACATTTCACAATAAGTAACTAAAA	TATAGAAAGGAGTTGATACAGTGAAGGATGTTTTAG
ATTTACATTTCACAATAAGTAACTAAAA	CTTATAAACGACATTTTAGAAGCAGGAGTAGAAAA
ATTTACATTTCACAATAAGTAACTAAAA	CTTGTAACCCATCGCTGTCCCTTTGACAAAAATCGC
ATTTACATTTCACAATAAGTAACTAAAA	CGCTACATGCTTGATGTGCTTTACACAAAAGAGAGCA
ATTTACATTTCACAATAAGTAACTAAAA	CGCCATTTACAATCACCCTTCCGGAGTTTGATCTGT
ATTTACATTTCACAATAAGTAACTAAAA

>NC_021837|1|1|10726-11203|CRT
ATTTACATTTCACAATAAGTAACTAAAAC	GAAATTGTAAAATCTATATCCGTTGATTCAACAAA
ATTTACATTTCACAATAAGTAACTAAAAC	TTAATTTGATAGTCATAATTTATTTCCTCCTATTTT
ATTTACATTTCACAATAAGTAACTAAAAT	ATAGAAAGGAGTTGATACAGTGAAGGATGTTTTAG
ATTTACATTTCACAATAAGTAACTAAAAC	TTATAAACGACATTTTAGAAGCAGGAGTAGAAAA
ATTTACATTTCACAATAAGTAACTAAAAC	TTGTAACCCATCGCTGTCCCTTTGACAAAAATCGC
ATTTACATTTCACAATAAGTAACTAAAAC	GCTACATGCTTGATGTGCTTTACACAAAAGAGAGCA
ATTTACATTTCACAATAAGTAACTAAAAC	GCCATTTACAATCACCCTTCCGGAGTTTGATCTGT
ATTTACATTTCACAATAAGTAACTAAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NC_021837.1\|WP_003733187.1\|8119_8578_+\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|378956
NC_021837.1\|WP_003721290.1\|15814_16213_-\|hypothetical-protein	unknown	unknown	unknown
NC_021837.1\|WP_003721303.1\|2957_3773_+\|histidine-phosphatase-family-protein	unknown	unknown	gnl\|CDD\|223483
NC_021837.1\|WP_010989497.1\|19499_20150_-\|transaldolase	unknown	unknown	gnl\|CDD\|223254
NC_021837.1\|WP_003727301.1\|13801_14095_-\|PTS-sugar-transporter-subunit-IIB	unknown	unknown	gnl\|CDD\|99908
NC_021837.1\|WP_023547217.1\|3893_5324_+\|CapA-family-protein	unknown	unknown	gnl\|CDD\|225399
NC_021837.1\|WP_012951247.1\|9755_10334_-\|hypothetical-protein	unknown	unknown	unknown
NC_021837.1\|WP_003727295.1\|746_2162_-\|multidrug-efflux-MFS-transporter	unknown	unknown	gnl\|CDD\|129794
NC_021837.1\|WP_012951245.1\|15153_15804_-\|ribulose-phosphate-3-epimerase	unknown	unknown	gnl\|CDD\|223114
NC_021837.1\|WP_014601718.1\|8584_8944_+\|Lin0512-family-protein	unknown	unknown	gnl\|CDD\|131113
NC_021837.1\|WP_023547219.1\|5902_7738_-\|lmo0514-family-class-1-internalin	unknown	unknown	gnl\|CDD\|380190
NC_021837.1\|WP_023547216.1\|2308_2677_+\|DUF1304-domain-containing-protein	unknown	unknown	gnl\|CDD\|226282
NC_021837.1\|WP_014600546.1\|17330_19391_-\|BglG-family-transcription-antiterminator	unknown	unknown	gnl\|CDD\|226234
NC_021837.1\|WP_003733191.1\|16229_16697_-\|PTS-sugar-transporter-subunit-IIA	unknown	unknown	gnl\|CDD\|238129
NC_021837.1\|WP_003721301.1\|5370_5802_-\|universal-stress-protein	unknown	unknown	gnl\|CDD\|366180
NC_021837.1\|WP_003721288.1\|16724_17327_-\|SIS-domain-containing-protein	unknown	unknown	gnl\|CDD\|223865
NC_021837.1\|WP_003721294.1\|12515_13787_-\|PTS-galactitol-transporter-subunit-IIC	unknown	unknown	gnl\|CDD\|226298
NC_021837.1\|WP_003721297.1\|8968_9649_-\|type-1-glutamine-amidotransferase	unknown	unknown	gnl\|CDD\|153212
NC_021837.1\|WP_009930756.1\|14110_15157_-\|galactitol-1-phosphate-5-dehydrogenase	unknown	unknown	gnl\|CDD\|176198
NC_021837.1\|WP_003721295.1\|11440_12376_-\|ribose-phosphate-pyrophosphokinase	unknown	unknown	gnl\|CDD\|234929

Protein	Function_ID	Function_description	E-value
NC_021837.1\|WP_003733187.1\|8119_8578_+\|MarR-family-transcriptional-regulator	gnl\|CDD\|378956	pfam12802, MarR_2, MarR family. The Mar proteins are involved in the multiple antibiotic resistance, a non-specific resistance system. The expression of the mar operon is controlled by a repressor, MarR. A large number of compounds induce transcription of the mar operon. This is thought to be due to the compound binding to MarR, and the resulting complex stops MarR binding to the DNA. With the MarR repression lost, transcription of the operon proceeds. The structure of MarR is known and shows MarR as a dimer with each subunit containing a winged-helix DNA binding motif.	1.03599e-12
NC_021837.1\|WP_003721303.1\|2957_3773_+\|histidine-phosphatase-family-protein	gnl\|CDD\|223483	COG0406, phoE, Broad specificity phosphatase PhoE and related phosphatases [General function prediction only].	5.01016e-50
NC_021837.1\|WP_010989497.1\|19499_20150_-\|transaldolase	gnl\|CDD\|223254	COG0176, MipB, Transaldolase [Carbohydrate transport and metabolism].	5.85703e-62
NC_021837.1\|WP_003727301.1\|13801_14095_-\|PTS-sugar-transporter-subunit-IIB	gnl\|CDD\|99908	cd05566, PTS_IIB_galactitol, PTS_IIB_galactitol: subunit IIB of enzyme II (EII) of the galactitol-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS). In this system, EII is a galactitol-specific permease with two cytoplasmic domains (IIA and IIB) and a transmembrane channel IIC domain that are expressed on three distinct polypeptide chains, in contrast to other PTS sugar transporters. The three genes encoding these subunits (gatA, gatB, and gatC) comprise the gatCBA operon. Galactitol PTS permease takes up exogenous galactitol, releasing the phosphate ester into the cytoplasm in preparation for oxidation and further metabolism via a modified glycolytic pathway called the tagatose-6-phosphate glycolytic pathway. The IIB domain fold includes a central four-stranded parallel open twisted beta-sheet flanked by alpha-helices on both sides. The seven major PTS systems with this IIB fold include galactitol, chitobiose/lichenan, ascorbate, lactose, mannitol, fructose, and a sensory system with similarity to the bacterial bgl system.	3.39912e-27
NC_021837.1\|WP_023547217.1\|3893_5324_+\|CapA-family-protein	gnl\|CDD\|225399	COG2843, PgsA, Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation) [Cell envelope biogenesis, outer membrane].	8.54166e-100
NC_021837.1\|WP_003721288.1\|16724_17327_-\|SIS-domain-containing-protein	gnl\|CDD\|223865	COG0794, GutQ, Predicted sugar phosphate isomerase involved in capsule formation [Cell envelope biogenesis, outer membrane].	1.67992e-75
NC_021837.1\|WP_003727295.1\|746_2162_-\|multidrug-efflux-MFS-transporter	gnl\|CDD\|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	3.97112e-80
NC_021837.1\|WP_012951245.1\|15153_15804_-\|ribulose-phosphate-3-epimerase	gnl\|CDD\|223114	COG0036, Rpe, Pentose-5-phosphate-3-epimerase [Carbohydrate transport and metabolism].	8.25352e-108
NC_021837.1\|WP_014601718.1\|8584_8944_+\|Lin0512-family-protein	gnl\|CDD\|131113	TIGR02058, lin0512_fam, conserved hypothetical protein. This family consists of few members, broadly distributed. It occurs so far in several Firmicutes (twice in Oceanobacillus), one Cyanobacterium, one alpha Proteobacterium, and (with a long prefix) in plants. The function is unknown. The alignment includes a perfectly conserved motif GxGxDxHG near the N-terminus. [Hypothetical proteins, Conserved].	4.36834e-66
NC_021837.1\|WP_023547219.1\|5902_7738_-\|lmo0514-family-class-1-internalin	gnl\|CDD\|380190	NF033186, internalin_K, class 1 internalin InlK. Internalins, as found in the intracellular human pathogen Listeria monocytogenes, are paralogous surface-anchored proteins with an N-terminal signal peptide, leucine-rich repeats, and a C-terminal LPXTG processing and cell surface anchoring site. Members of this family are internalin K (InlK), a virulence factor. See articles PMID:17764999. for a general discussion of internalins, and PMID:21829365, PMID:22082958, and PMID:23958637 for more information about internalin K.	2.05178e-120
NC_021837.1\|WP_023547216.1\|2308_2677_+\|DUF1304-domain-containing-protein	gnl\|CDD\|226282	COG3759, COG3759, Predicted membrane protein [Function unknown].	8.12227e-41
NC_021837.1\|WP_014600546.1\|17330_19391_-\|BglG-family-transcription-antiterminator	gnl\|CDD\|226234	COG3711, BglG, Transcriptional antiterminator [Transcription].	4.55419e-80
NC_021837.1\|WP_003733191.1\|16229_16697_-\|PTS-sugar-transporter-subunit-IIA	gnl\|CDD\|238129	cd00211, PTS_IIA_fru, PTS_IIA, PTS system, fructose/mannitol specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIA PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation.	2.76446e-37
NC_021837.1\|WP_003721301.1\|5370_5802_-\|universal-stress-protein	gnl\|CDD\|366180	pfam00582, Usp, Universal stress protein family. The universal stress protein UspA is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. UspA enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae UspA reveals an alpha/beta fold similar to that of the Methanococcus jannaschii MJ0577 protein, which binds ATP, though UspA lacks ATP-binding activity.	4.03126e-27
NC_021837.1\|WP_003721294.1\|12515_13787_-\|PTS-galactitol-transporter-subunit-IIC	gnl\|CDD\|226298	COG3775, GatC, Phosphotransferase system, galactitol-specific IIC component [Carbohydrate transport and metabolism].	7.01085e-178
NC_021837.1\|WP_003721297.1\|8968_9649_-\|type-1-glutamine-amidotransferase	gnl\|CDD\|153212	cd01741, GATase1_1, Subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain. This group contains a subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain. GATase activity catalyses the transfer of ammonia from the amide side chain of glutamine to an acceptor substrate. Glutamine amidotransferases (GATase) includes the triad family of amidotransferases which have a conserved Cys-His-Glu catalytic triad in the glutaminase active site. In this subgroup this triad is conserved. GATase activity can be found in a range of biosynthetic enzymes, including: glutamine amidotransferase, formylglycinamide ribonucleotide, GMP synthetase , anthranilate synthase component II, glutamine-dependent carbamoyl phosphate synthase, cytidine triphosphate synthetase, gamma-glutamyl hydrolase, imidazole glycerol phosphate synthase and, cobyric acid synthase. Glutamine amidotransferase (GATase) domains can occur either as single polypeptides, as in glutamine amidotransferases, or as domains in a much larger multifunctional synthase protein, such as CPSase.	7.71833e-60
NC_021837.1\|WP_009930756.1\|14110_15157_-\|galactitol-1-phosphate-5-dehydrogenase	gnl\|CDD\|176198	cd08236, sugar_DH, NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Horse liver alcohol dehydrogenase is a dimeric enzyme and each subunit has two domains. The NAD binding domain is in a Rossmann fold and the catalytic domain contains a zinc ion to which substrates bind. There is a cleft between the domains that closes upon formation of the ternary complex.	0
NC_021837.1\|WP_003721295.1\|11440_12376_-\|ribose-phosphate-pyrophosphokinase	gnl\|CDD\|234929	PRK01259, PRK01259, ribose-phosphate diphosphokinase.	2.38027e-153

>NC_021837.1|WP_012951247.1|9755_10334_-|hypothetical-protein
MKKILVPILLLATILASCSSPNEKITKDTKISKTNTIRADYKVPKDIKELEDDSANIVKVKFLQNKTIGKDGSTISEIEILTSYKGNLEKGSKVDISEPWYLSDGKYVAVENYIALDKEQEYTIFLGEKDKDTYPLSSLGYGKFGGSLKEDQAVLADFNILGEVQKFDFISENTEEVKNYQLIKEQVAGKYK
>NC_021837.1|WP_003721297.1|8968_9649_-|type-1-glutamine-amidotransferase
MIIDVLQHVPHEGPGLIANWARENQHQLKIHSLFEENAHVPNDSDFLIVLGGPMGINDTAEFPWLKDERKLIKRLSEQHKPVFGVCLGAQQIAATFGSEITVNKEKEVGWFPVKRTSDKLLFFPESLNVFHWHQDTFALPTGSTRLFASEGCLNQAFLYGENIIGLQFHFEMEKAGIETILRIDEAFITPGKYVQSVEVMREKDVPEDNKQMLEAILDYLINPKTI
>NC_021837.1|WP_014601718.1|8584_8944_+|Lin0512-family-protein
MEQILFIQTGFGVDVHGQNITNAAERAVRNAIFTNSMPGIQGLLPDGDLQNMVVNIKLALPCDADQLDEDTIRAIIPYGTVTIEKMAGGMMTTSGIFLEDKEDKNDLMYIVNASVETGY
>NC_021837.1|WP_003733187.1|8119_8578_+|MarR-family-transcriptional-regulator
MNNEQNMNQQIALFYFGYKAFTETADLIIAKHSLKRLHHRILFFTARMPGLTINELLTFLEISKQALHQPLAELKERELLTIEQGRRDKRQRCIFLTAAGKELENELGAAQRKQMSEIFTNSADTDGMHFTEVMEGYAKNRPGAAFIKDFKE
>NC_021837.1|WP_023547219.1|5902_7738_-|lmo0514-family-class-1-internalin
MKKALKLFLAMICMFIMIYPSTAAHAEETNIVNIPDANLKTYLNGLLKQASDAPITKTQMNTIQTVTLSGSTYTDLTGLEEAGNLVTLSINNTNIQTLEPIKNQTSLTYLTVGGDNVKDSLFVDLNGLVNLQSLSISGSEVTHNVFKTFNKLPKLTYLYAQNSMKITDISALASLPALTTLFLQFDGIDDFRPLNDFESFKNGNLKALAAFGQNTGRTNPRITLKSGKLDYNETNQTLYLPFSMMPKPLTSFDGTVAPFSKSTSASNTYLGFNDVALPSSRLSITDDGITVSGVTKEEFDNLDEIEYNARYDFPTGSYPTPPSMTSYTISSGTYDQYFDISHTLDLTADESFDYNQYDTTSEEQFLKDVHAETDDGTAVKSDFDQVVKLDVPGEYTVTLNAENAAGLKATPVTVKVTVHEKPVITSDSQISYKKETTKSVDEFLKEIHGSVTGNAVLTSDFDKVVDLNTPGEYTVTLNAINDRGQKADPVTVVVTVTTSDSGHVDPVPPTPEIKPTPQEETDQTIIPEPQSETTEDSVKEDQAKDGQAKSEEKADKTSLTTKENKVEKSEKTNQPKTKALPQTGDTNKTALPIAGVMLSLAALLIFRKSKS
>NC_021837.1|WP_003721301.1|5370_5802_-|universal-stress-protein
MEKYHRILVAVDGSEPAKLAFEKGLELALKLDGVLGIASIVDLRAFSPNVSYDGSLEEKAELELKTSVNEYAEKARTAGVKQVETFVAKGNPKILLSTDIPAEFQADLIICGATGMNRVEKLVLGSVSSYIMAHAICDTLIAR
>NC_021837.1|WP_023547217.1|3893_5324_+|CapA-family-protein
MKKLTYVIITGLVLVFIAGAFWITNSTNQSDQKATQTEPIKKISPANVKTISSEAKKTLNSLASSGADKASISDLKQLIKELKSYPTEKNDSGVYLQNLTACLEAVKSYTTGKTDEKTLGKVYPAFLASEQKLSAIEKTNQYDWFYAAAATNQQGLKEKGVVTLTMVGDNSFGTYPETPEHLKFDNVFQKSNGNNTYVYKNCLPWFKSDDYTVINAESAFTNATKAENKKWRIKSDPAHVAFLPASGVEAANLANNHTMDYFQVGYDDTLKAFKENNIPVFNTDAPLETTIKGMKTVLLGYDCRMSQQSPAYLERIVKDVKKYKKEDTLVIVNMHWGVEYRETPTDYQTQFGHAILDAGADIIMGSHPHRLESVEKYKDKYIVYSMGDFAFGADPTLLSRMTSMFQLRFTKEDNKIVLKDISIVPTYENSDGSTTENNYQPLPVFGDDAKKIVDELNRISKPIEGGVTEYTYFDPF
>NC_021837.1|WP_003721303.1|2957_3773_+|histidine-phosphatase-family-protein
MKKNIFKLLMALCAVLLIAGCGNSTSADKKETKETKEDGTVTFYVVRHGKTMLNTTDRVQGWSDAVLTPAGEEVVKSAGKGLKDVDFSAAYSSDSGRAIQTANLILKESDKSADKEVQTDPRFREFNFGSYEGDLNENMWTDIAKSQGKTLEEWQKAGLSPKDFANSVAALDKTRVKEGENWPAEDYATIQARLKEGLTDVAKKESKNGDSNVLLVSHGLSIGALLDTIEPGYKLPAEGIKNASVTKITYKDGKFTIGDVNDLSYVEKGSK
>NC_021837.1|WP_023547216.1|2308_2677_+|DUF1304-domain-containing-protein
MAILAFILTFIVMIEHIYIMILEMFFANTKLAAKTFGVEKELLANKKVQTLFVNQGLYNGFLAAGLVWGLFFAGAGFAETVQIFFLSCVVVAALFGGATSSKGILVKQGLPAVLALVAVLLV
>NC_021837.1|WP_003727295.1|746_2162_-|multidrug-efflux-MFS-transporter
MQQEATGGQKIRPIPIIASFLMAGFIGLFSETALNMALSDLIQVFDISSATVQWLTTGYLLTLGILVPISGLLLQWFTTRGLFFTAVSFSIAGTLIAALSPTFAMLMIGRVVQAVGTALLLPLMFNTILLIFPEHKRGSAMGMIGLVIMFAPAVGPTISGLILENLTWNWIFWISLPFLIIALLFGMKFMQNVSVVTKPKIDILSIILSTLGFGGVVFAFSSAGESGWGSATVLVSIIVGGLALGLFVWRQLTMEKPLMDLKVFKYPMFTLGLILVFISFMMILSTMILLPLYLQNSLALAAFSAGLVLLPGGVLNGLMSPFTGRLFDAYGPRALVIPGFIVAVVALFFLTRIEVGTSALTIIVLHSVLMIGISMVMMPAQTNGLNQLPPKLYPDGTAIMNTLQQVSGAIGTAVAITIMSAGQKAYMETAQGVGPEQMVASLTAGIQNAFVFGLIMACIGLLCSLFIRKAK
>NC_021837.1|WP_003721295.1|11440_12376_-|ribose-phosphate-pyrophosphokinase
MAGKMKLFSVTSERPLATKIADYLDIPLCEVELQKFSDGEVKINIEESIRGTNAYVVQSMNSNVNERLMELLIMVDALKRASVHSINIIMPYYGYARQDRKARSREPITAKLMANLIQRAGANRLITVDLHAAQIQGFFNIPIDHLSAIPLIGDYLIENYGEKDVVVVAPDHSGVVRARRIADRLNAPIAILNRKPRPHEDEIMSVIGDVKGKVAIVVDDIIDTGVRATTSADILLEKGAVEVIACATHSVMAGNATERLQNSSIKEVITSDSIDLPEDKQFDKLTTISIGRILGRAIEGVQENRSLHPLF
>NC_021837.1|WP_003721294.1|12515_13787_-|PTS-galactitol-transporter-subunit-IIC
MDIILDFFKYIIGLGVTVMMPIIITILGVIFRKKISVAFKAGLTVGVGFVGLGVITSLMLTTITPVTKALVENYNFKLTATDIGWGVGSSLAWGTEVVPFVFVAIIATNILMIAFKWTKTMDVDIWNYWQPLFIASALYLTTGSMIIAVLSSIINMAIIFKIADWTQKDVEDVLGLEGISLPQIQTTGWALVGYPMNWLLGKIPGVRKINWSTEKVQSRLGIFGEPMLMGLIIGGGLAAIAQMPLSQVLQTGVTIAASLVLIPRMVSLLMDGLTVISEAAHEFMEKRFPGRELFIGLDSAVGIGHPFVLSLGLLMIPITLILAFILPGNKVLPLADLTALPFYMIFAIVPSKGNLFRGIFTGIVIVIITLYLSGAAAPLMTELAGQIGYNIPKDAVEVTSLAVGTQWYTWIVYYGLHWFGGIL
>NC_021837.1|WP_003727301.1|13801_14095_-|PTS-sugar-transporter-subunit-IIB
MKKKKIYVCCGTGIATSTVISKKVRAVLDEKRIPYEISQCTVQEVASKVSTSKPDIIVSSTTVTGDVGDVPVVIGRSFLTGLKKQETIDEILAILQD
>NC_021837.1|WP_009930756.1|14110_15157_-|galactitol-1-phosphate-5-dehydrogenase
MKALKLYGKRDLRYEEADMPTIEEPDDVILKVKTVGICGSDISRYSKLGPYVPGMVWGHEFSGEVIEVGSEVTDIEIGDRAAGCPALYCGECEYCKKGEFARCRKLTVIGARHPGAYAEYIKLPAENVVKIPNELDYEAAALVEPSAVVVHGFYHTKLQAGDDVVVVGSGNIGLLAIQWAKVFGARRVIAIDVDDKKLALAKEVGADVVINSLKEDPLEVVAAHTDGLNADLVVEAAGSPITSAQVFAYAKKGGGVVFLGIPYADVTIERFYFEKIVRSELTVWGSWNAISAPFPGKEWQTTIHFLANKQINIEPMITHRLSLAEGPEVFERIYERNEFFGKVLFFPE
>NC_021837.1|WP_012951245.1|15153_15804_-|ribulose-phosphate-3-epimerase
MAKIVPSVFGADIGRINEQLQVLEKNDIDLLHVDMMDGSFVPNIAFGPDQIKMMKKGTKLQFDVHMMVYEPDRYIPRLVEAGAHMITVHQEATTHLHRTIQLIKSYGVRAGVVLNPGTPPSTLEYVLDDIDCILLMTVNPGLGGQKFFQSSLEKIRKTKAYIGNRPIQIEVDGGVNAELAKECTLAGADLIVVGSYLFEGDIEANLEKLAKGVLTE
>NC_021837.1|WP_003721290.1|15814_16213_-|hypothetical-protein
MGSFFASFVDWLIGSPGRFVVNLIEDNMLIFMVVVMIYATTILYAKWTLAYYLPKKMSQLAEMKTWELDELYAAWQTEKKALPWYILVPSRNEFWVKSARNAPESTKLLHFSQQKLKLSDKEKLQKIIEIQS
>NC_021837.1|WP_003733191.1|16229_16697_-|PTS-sugar-transporter-subunit-IIA
MDVLEYFKEEMVRFSNEQNKEKLLAEMAEQLCEVGAVKPSYKDAVIKREKVFPTGLLTAHAGVAIPHTDSEHVIRPVVAVRILKKPVSFIEMASDNEAIDVRIVFMMALRSADEQLDMLQTLIQLIQDEEVMTTLLKAQETGDVLSAIEHFSKNN
>NC_021837.1|WP_003721288.1|16724_17327_-|SIS-domain-containing-protein
MDKQAILNNIHQTWQEEANAISRLPEVTSEEALVKTVETIAECTGKIVVAGCGTSGVAAKKLVHSFNCIERPAVFLTPSDAVHGTLGVLQKEDILILISKGGNTGELLNLIPACKTKGSTLIGVTENPDSVIAKEADIFFPVSVSKEPDPFNMLATASTMAVIASFDAVIVCLMTYMNYTKEQFSVIHPGGAVGNKLLNK
>NC_021837.1|WP_014600546.1|17330_19391_-|BglG-family-transcription-antiterminator
MYLDNRSKTLFQEVIKNPNITNKQLEVKYKLSRYQISYSFQKVNEWLKWKNYPEVKRSKNGRFILEPELTALFSEKETRDPSVEYLPSENERANLILLMLLTSKEELSLAHFTTKIQVSKNTILRDLKVAQKLLPKETTVTYSRASGYQLAGSEWELRKVLTQVVSSVKEMFRGEHYFLSYSGIEKVQLMEIRRTLEEAEAMMQIKFTYEQIELLPYLLSVMFLRIRDRRLINTAFHIDEKSLSDTREYHITDILLEKTGPVPEQERLFITLQLLTTNIFSGEILTEKLTEDLEKVVLTCLDLFEKKALVSLKNKHILIEKLLLHLKPAYYRIKYQMNLEDTLYEKFNQEFEALNFIVKEAFDPLAKFIGREIPAGEIFFISLFIGSDMIPQNDIYHKQKRAIVLCPSGVTFSKIMENILVKLFPEIHFYPTISVREYAFFKAEVDIVFSSIPLKDGENVFVVQPFMNDIEKTQLRQHVLQNLFGMGNQLTSIDKIMEVVERNADIKDPNAIRDGIIDILSANTATDENKRVKKVYLHDLITEDNIMICEDVKNYQEAIRLASQPLLLQQAITANYVKTMIDNHKFHDPYIIIGEDIAIPHAMPNAGVNRLAMSLLVVKNGVYFSETEQVHFVIVIAPVDKEQHIEALYQIVHLAENHQILDDLLENVTKEKIMQTINQLVIREDE
>NC_021837.1|WP_010989497.1|19499_20150_-|transaldolase
MHLDSANLDDVKKIQASSIFKGITTNPTILVKEKCNRQTAINRILELTDKQVFVQTVGFTYEEILADARMLLTMFGKDKIAIKIPAHEAGTNVIDTLKKEDKTIQILGTAIYSADQAITAALAGADFVAPYVNRMSAANIDPFKEITQMRHFFDKKALKTQIMAASFKHSGQVMQAYESGADTVTIPYEIYSQMTNKVLAVEAIRVFNEDAVLYEK

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Crispr_ID: NC_021837_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_021837_2

687896-688006

Orphan

Consensus_repeat	Method
TTTTGAAAGTTCTGGGAAGGATTAAATCATCGCT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_021837_2

>merge|NC_021837|2|687896-688006|CRISPRCasFinder
TTTTGAAAGTTCTGGGAAGGATTAAATCATCGCTTTGCTCAGATTTATATTGAAGAACTAAATCAAAATAAAGTACATTTTGAAAGTTCTGGGAAGGATTAAATCATCGCT

>NC_021837|2|2|687896-688006|CRISPRCasFinder
TTTTGAAAGTTCTGGGAAGGATTAAATCATCGCT	TTGCTCAGATTTATATTGAAGAACTAAATCAAAATAAAGTACA
TTTTGAAAGTTCTGGGAAGGATTAAATCATCGCT

Protein	Signature genes	Signature genes Name	Protein_function
NC_021837.1\|WP_003722063.1\|689888_690206_+\|YbaB/EbfC-family-nucleoid-associated-protein	unknown	unknown	gnl\|CDD\|234669
NC_021837.1\|WP_003722062.1\|690314_690911_+\|recombination-protein-RecR	unknown	unknown	gnl\|CDD\|234616
NC_021837.1\|WP_009931159.1\|691216_692059_-\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|223729
NC_021837.1\|WP_023548277.1\|681382_682897_+\|gluconokinase	unknown	unknown	gnl\|CDD\|212659
NC_021837.1\|WP_003732089.1\|677457_679197_+\|thiol-reductant-ABC-exporter-subunit-CydC	unknown	unknown	gnl\|CDD\|227320
NC_021837.1\|WP_003722061.1\|690925_691171_+\|YaaL-family-protein	unknown	unknown	gnl\|CDD\|378478
NC_021837.1\|WP_012951102.1\|694472_695069_-\|dihydroxyacetone-kinase-subunit-L	unknown	unknown	gnl\|CDD\|274099
NC_021837.1\|WP_003727657.1\|687128_687311_+\|DUF3188-domain-containing-protein	unknown	unknown	gnl\|CDD\|371501
NC_021837.1\|WP_023548275.1\|679338_680286_+\|LPXTG-cell-wall-anchor-domain-containing-protein	unknown	unknown	gnl\|CDD\|273478
NC_021837.1\|WP_009930438.1\|694094_694469_-\|PTS-dependent-dihydroxyacetone-kinase-phosphotransferase-subunit-DhaM	unknown	unknown	gnl\|CDD\|184702
NC_021837.1\|WP_003722065.1\|687328_687793_+\|DUF3284-domain-containing-protein	unknown	unknown	gnl\|CDD\|378692
NC_021837.1\|WP_003732079.1\|695090_696080_-\|dihydroxyacetone-kinase-subunit-DhaK	unknown	unknown	gnl\|CDD\|237724
NC_021837.1\|WP_009931588.1\|684807_684963_-\|hypothetical-protein	unknown	unknown	unknown
NC_021837.1\|WP_003732088.1\|680328_681267_+\|GW-domain-containing-glycosaminoglycan-binding-protein	unknown	unknown	gnl\|CDD\|226309
NC_021837.1\|WP_023548279.1\|692179_693019_-\|Cof-type-HAD-IIB-family-hydrolase	unknown	unknown	gnl\|CDD\|319818
NC_021837.1\|WP_014601199.1\|688119_689859_+\|DNA-polymerase-III-subunit-gamma/tau	unknown	unknown	gnl\|CDD\|235505
NC_021837.1\|WP_023548281.1\|693137_693989_-\|MurR/RpiR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224651
NC_021837.1\|WP_003722070.1\|683594_684236_+\|hypothetical-protein	unknown	unknown	unknown
NC_021837.1\|WP_003722067.1\|686904_687126_+\|hypothetical-protein	unknown	unknown	unknown
NC_021837.1\|WP_003725004.1\|685405_686770_+\|PTS-sugar-transporter-subunit-IIC	unknown	unknown	gnl\|CDD\|224372

Protein	Function_ID	Function_description	E-value
NC_021837.1\|WP_003722063.1\|689888_690206_+\|YbaB/EbfC-family-nucleoid-associated-protein	gnl\|CDD\|234669	PRK00153, PRK00153, YbaB/EbfC family nucleoid-associated protein.	3.53269e-41
NC_021837.1\|WP_003722062.1\|690314_690911_+\|recombination-protein-RecR	gnl\|CDD\|234616	PRK00076, recR, recombination protein RecR; Reviewed.	7.77001e-132
NC_021837.1\|WP_009931159.1\|691216_692059_-\|aldo/keto-reductase	gnl\|CDD\|223729	COG0656, ARA1, Aldo/keto reductases, related to diketogulonate reductase [General function prediction only].	6.97706e-130
NC_021837.1\|WP_014601199.1\|688119_689859_+\|DNA-polymerase-III-subunit-gamma/tau	gnl\|CDD\|235505	PRK05563, PRK05563, DNA polymerase III subunits gamma and tau; Validated.	0
NC_021837.1\|WP_003732089.1\|677457_679197_+\|thiol-reductant-ABC-exporter-subunit-CydC	gnl\|CDD\|227320	COG4987, CydC, ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones].	0
NC_021837.1\|WP_003722061.1\|690925_691171_+\|YaaL-family-protein	gnl\|CDD\|378478	pfam10704, DUF2508, Protein of unknown function (DUF2508). This family is conserved in Firmicutes. Several members are annotated as being the protein YaaL. The function is not known.	2.68189e-15
NC_021837.1\|WP_012951102.1\|694472_695069_-\|dihydroxyacetone-kinase-subunit-L	gnl\|CDD\|274099	TIGR02365, dha_L_ycgS, dihydroxyacetone kinase, phosphoprotein-dependent, L subunit. Two types of dihydroxyacetone kinase (glycerone kinase) are described. In yeast and a few bacteria, e.g. Citrobacter freundii, the enzyme is a single chain that uses ATP as phosphoryl donor and is designated EC 2.7.1.29. By contract, E. coli and many other bacterial species have a multisubunit form (EC 2.7.1.-) with a phosphoprotein donor related to PTS transport proteins. This family represents the subunit homologous to the E. coli YcgS subunit.	1.69543e-82
NC_021837.1\|WP_003727657.1\|687128_687311_+\|DUF3188-domain-containing-protein	gnl\|CDD\|371501	pfam11384, DUF3188, Protein of unknown function (DUF3188). This bacterial family of proteins has no known function.	1.21027e-11
NC_021837.1\|WP_023548275.1\|679338_680286_+\|LPXTG-cell-wall-anchor-domain-containing-protein	gnl\|CDD\|273478	TIGR01167, Zinc_metalloprotease_ZmpB, LPXTG-motif cell wall anchor domain. This model describes the LPXTG motif-containing region found at the C-terminus of many surface proteins of Streptococcus and Streptomyces species. Cleavage between the Thr and Gly by sortase or a related enzyme leads to covalent anchoring at the new C-terminal Thr to the cell wall. Hits that do not lie at the C-terminus or are not found in Gram-positive bacteria are probably false-positive. A common feature of this proteins containing this domain appears to be a high proportion of charged and zwitterionic residues immediatedly upstream of the LPXTG motif. This model differs from other descriptions of the LPXTG region by including a portion of that upstream charged region. [Cell envelope, Other].	1.11895e-05
NC_021837.1\|WP_003722065.1\|687328_687793_+\|DUF3284-domain-containing-protein	gnl\|CDD\|378692	pfam11687, DUF3284, Domain of unknown function (DUF3284). This family of proteins with unknown function appears to be restricted to Firmicutes.	5.35099e-31
NC_021837.1\|WP_003732079.1\|695090_696080_-\|dihydroxyacetone-kinase-subunit-DhaK	gnl\|CDD\|237724	PRK14481, PRK14481, dihydroxyacetone kinase subunit DhaK; Provisional.	0
NC_021837.1\|WP_003732088.1\|680328_681267_+\|GW-domain-containing-glycosaminoglycan-binding-protein	gnl\|CDD\|226309	COG3786, COG3786, Uncharacterized protein conserved in bacteria [Function unknown].	3.04876e-98
NC_021837.1\|WP_023548279.1\|692179_693019_-\|Cof-type-HAD-IIB-family-hydrolase	gnl\|CDD\|319818	cd07516, HAD_Pase, phosphatase, similar to Escherichia coli Cof and Thermotoga maritima TM0651; belongs to the haloacid dehalogenase-like superfamily. Escherichia coli Cof is involved in the hydrolysis of HMP-PP (4-amino-2-methyl-5-hydroxymethylpyrimidine pyrophosphate, an intermediate in thiamin biosynthesis), Cof also has phosphatase activity against the coenzymes pyridoxal phosphate (PLP) and FMN. Thermotoga maritima TM0651 acts as a phosphatase with a phosphorylated carbohydrate molecule as a possible substrate. Escherichia coli YbhA is also a member of this family and catalyzes the dephosphorylation of PLP, YbhA can also hydrolyze erythrose-4-phosphate and fructose-1,6-bis-phosphate. Members of this family belong to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	7.1326e-85
NC_021837.1\|WP_023548277.1\|681382_682897_+\|gluconokinase	gnl\|CDD\|212659	cd07770, FGGY_GntK, Gluconate kinases; a subfamily of the FGGY family of carbohydrate kinases. This subfamily is composed of a group of gluconate kinases (GntK, also known as gluconokinase; EC 2.7.1.12) encoded by the gntK gene, which catalyzes the ATP-dependent phosphorylation of D-gluconate and produce 6-phospho-D-gluconate and ADP. The presence of Mg2+ might be required for catalytic activity. The prototypical member of this subfamily is GntK from Lactobacillus acidophilus. Unlike Escherichia coli GntK, which belongs to the superfamily of P-loop containing nucleoside triphosphate hydrolases, members in this subfamily are homologous to glycerol kinase, xylulose kinase, and rhamnulokinase from Escherichia coli. They have been classified as members of the FGGY family of carbohydrate kinases, which contain two large domains separated by a deep cleft that forms the active site. This model spans both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain. Some uncharacterized homologous sequences are also included in this subfamily. The Lactobacillus gnt operon contains a single gntK gene. The gnt operons of some bacteria, such as Corynebacterium glutamicum, have two gntK genes. For example, the C. glutamicum gnt operon has both a gluconate kinase gntV gene (also known as gntK) and a second hypothetical gntK gene (also known as gntK2). Both gluconate kinases encoded by these genes belong to this family, however the protein encoded by C. glutamicum gntV is not included in this model as it is truncated in the C-terminal domain.	0
NC_021837.1\|WP_023548281.1\|693137_693989_-\|MurR/RpiR-family-transcriptional-regulator	gnl\|CDD\|224651	COG1737, RpiR, Transcriptional regulators [Transcription].	1.3353e-62
NC_021837.1\|WP_009930438.1\|694094_694469_-\|PTS-dependent-dihydroxyacetone-kinase-phosphotransferase-subunit-DhaM	gnl\|CDD\|184702	PRK14484, PRK14484, phosphotransferase mannnose-specific family component IIA; Provisional.	1.1917e-48
NC_021837.1\|WP_003725004.1\|685405_686770_+\|PTS-sugar-transporter-subunit-IIC	gnl\|CDD\|224372	COG1455, CelB, Phosphotransferase system cellobiose-specific component IIC [Carbohydrate transport and metabolism].	3.47828e-162

>NC_021837.1|WP_003722065.1|687328_687793_+|DUF3284-domain-containing-protein
MNVTQKLYISQKECFDTLVSSAIYDVKNATGKTLQVRKLEGYKYQRTMSNGALATTKIVKVQPNELYQFETSSRVNTHTTTYTIKSTSETTCEVTYNELIETEKALNKMNNIIVGFMFGFFRKKRVKNLLKSIELSVINESKQKQEKLAAKSEQ
>NC_021837.1|WP_003727657.1|687128_687311_+|DUF3188-domain-containing-protein
MKIVNALFLISIGLIIIMFSPSYGKDGMASVPLLVTGLAVVLIGCVFIVLKIRKDKKEKN
>NC_021837.1|WP_003722067.1|686904_687126_+|hypothetical-protein
MIILNCPMKRDYITELLETYDKDGVTFKKIDEKGMKLTFETNIEDEEKAAKIAKETIKATEIGSVLYFQVSVG
>NC_021837.1|WP_003725004.1|685405_686770_+|PTS-sugar-transporter-subunit-IIC
MNGLTAFLEKYFVPVAAKIGSQKHLVALRDAFISTMPITMAGSIAVLLNAFFRDFPTDWGWTGFVEAMQPLIGINGYVYNGTLAIVSIIFAFSLGYNLSKAYEVDRLAGGLVSLAAFVMNLTVTVSLDAVKAAIAASNANFDVATLPKEFAGIYGFFSLSQVNGTGLFTAMIFGFISTIIYAKLMRRNIIIKMPDSVPPAVSKAFAAIIPALVALYVVGIIDWAFFKITNMDVITWISKTIQEPLLSLSQGYGAVLLVTFLVQLLWFFGIHGPNVLAPVLESLWGTAQLQNISAAQEGAKLPFEWVRGSFDAYVWMGGSGGTLVLIIALLMFSKRADARTVAKLSLAPGIFNINEPIMFGLPIVLNTIYLIPFLIAPMVMVTIAYFATTLGIVGPVKIAVVWVMPPLLNSFLATGGDWMAPVISLINMVVAFLIWVPFVITANRVGVPEEEMKA
>NC_021837.1|WP_009931588.1|684807_684963_-|hypothetical-protein
MAVKRDMPEESKNSKVVKKEHFSIVFPDDIKEPATVEEKKKQDAEKKTDDN
>NC_021837.1|WP_003722070.1|683594_684236_+|hypothetical-protein
MQQLKSKKKWLPALIVAVFVGIIVILAIMFGFFQRQEVFDKYEVAYEIDGKLYEVFPISATDIGVDKKSKDKNLYFRVNSYYNIDYLFRLAYKQYEINEPSTNKYYSGLIDYSVADNAYVTQKDVYITNNESYATYDFFDKNGKKIYSYNPEETSNDDYIVRIKPTILQGYEKSDIGSYDDYLNITALFKDKLGMDVNVRIDEDKEMVIFSIK
>NC_021837.1|WP_023548277.1|681382_682897_+|gluconokinase
MTSKPYIMGVDIGTSSTKAVLFNQRGEVIFRQATHYELITDETGKAEESPTEIFDAVLTSIQAVMKNINTEELAGISFSSAMHSLIMVGSNGELLTECITWADGRSSETLEKVKRDNYLFQLYEATGTPIHPMSPFAKICWLKEEKPTLFKRTEKFVDIKSYILYRLFGVWVMDESLASGTGLYNIMEHDWEFEAMEIVKLTPDFLPKVVPETYQLAGVKKEYAELMGIPENLPFIIGGSDGALANIGIQATGQNDVTITVGTSGAVRKLTDQFQIDSRGRTFCYGAGDGYFIAGGAVNNGGKVVEWGLQQFGSEAEISRRDFASFIAKIEEVPPGAAGLLFQPYLLGERAPFWTNDIRGGFVGLTINHTKAHFIRAVLEGVAFNLAEVYEAVSAPDDIIYVTGGISAHDAWCKLLADILNREIRVPHTIEGSSLGAAIIGMRSLGILKDLNLKHTLPIKAVYHPSENVLKYAELRLIFKQVTTQLMSSYSQLNSWQKKFDINS
>NC_021837.1|WP_003732088.1|680328_681267_+|GW-domain-containing-glycosaminoglycan-binding-protein
MKKLLSGLIVVLMVSLLGHSFNAEAASYEKIIYDKAVNLKGVVNQSKRNDGINSKMYKTSSSVKYLGSAKKYDKKTLIITREGKTARAKWYYCKLGNTTIGWIDSRAFTNIGKPTIADAVPALWNSKKAIITTKPKSTTATTYFFQKNSAGNWYEVRHFTSHIGKWGFDPKFSEKSSGTPVGVYRTGIAFGQKGNPGTKLTFRAITNRSYWISNSNDKAYNTWQERNSSSSADEKMKIPQYKYGMEVKYNAKRVKGKGSAVFYHVDSPKYNYTLGCVAQSEANTKEVLKFADKNTLIVLGEESRIKTFYGIN
>NC_021837.1|WP_023548275.1|679338_680286_+|LPXTG-cell-wall-anchor-domain-containing-protein
MKKFHGLILTVLVTCLIIPFSLAASAETNENGNNSTPTEEKTTDTTENIITEEKTEPAEPTKDTTVTPPQKSKVQTTIDITDSQEVYSYEQNSKIDLKDFTATLTDYTDTKLTNYRLAANSKLSTAQTGIQEVTLLGDNEDGKTTAVKLNYLVKEKTAQLTITDMNFDLETKIFTGKTKPFASVYMSSPADENFGEGTTTADKDGYFYAEWATTPKQITAYAFDESGNYSEEVTYQVPAKKQNEAVVTAPDKVKKIETKNAVKSATTKPTDVTKVTKDDKTDLPSTGDKGTEWIFVVAGVIVILVAVLLLRKRKK
>NC_021837.1|WP_003732089.1|677457_679197_+|thiol-reductant-ABC-exporter-subunit-CydC
MRKSSWIIPYIKENRGLFLLVIFLGTLTFASAGALMFTSGHLISKSSLMPESIMAVYISTVGVRAFGIMRSVSRYVERLSSHSLVLRILEKMRVRLYRLLEPQALLLKSRYKTGDILGLLAGDIEHLQNFYLTTMLPAIVSLVLYAGVVIALGAFSIPFAALFVLLIGLLVLVLPWVSLLYARGKNAYLKQGRNSLYQKFTDAVFGISDWKFSGREKTFISNYEKDEADMLRTENKQFHFVNWRDFFSQLVVGFMVIVMVYWSTAESRDGAFSGTMIAAFVLAIMALAEAFVPVSSAISDKSLYQDSLARLDKIEDPALPTFEEETKEIERINTENVVLKAENLTFAYDEKSPEILNGFDFTLQQGEKVAIIGRSGTGKSTFLKLVQGALLPTAGKVTMNDVEVEKLRPQIPELTSMLNQKAHLFSTTVLNNIRLGNQDASDEEVYEAAKKVQLHDFIMSMPDGYHTQMSEMGERFSGGERGRIALARILLQNTPIVILDEPTVGLDPITERDLLATIFETLADKSLIWVTHHLVGAEKMDRVLFLEEGKTLMEGPHAELMAEEPRYKRLYQLDRPIEL
>NC_021837.1|WP_014601199.1|688119_689859_+|DNA-polymerase-III-subunit-gamma/tau
MAYQALYRVFRPQSFQDVVGQEHVTKTLKNAIVQNKTSHAYLFSGPRGTGKTSAAKIFAKAINCEHGHDGEPCNECEICKGTTDGSIPDVLEIDAASNNGVEEIRDIREKVKYAPTVAKYKVYIIDEVHMLSTGAFNALLKTLEEPPKHVIFILATTEPHKLPLTIISRVQRFDFKRITTQDIIGRLKFILEEEKIPYDEKALMIVARAAEGGMRDALSLLDQVISYGSEEVTVEDALEITGSVAQNLLTKLVSAAFDGDAAEAISTLTALLAEGKDPVRLVEDLLVFFRDVLLYQKAPNLEETLERALIDDDFVALAKRADSLKVYEFVKILNTAQQQMRFSNHPGIYVEVALVQLTQAGQSVAGGGNVPADAASGSDVSDLKRQMEQMHQEIQTLKKQIASGAGAAPADKPTQNRGGSKKAINNGKQFKAPIGKINHVLGEAKKENLQLIRGCWGELLSMLMASQAALLNDAEPVAASQDTFVLKFKHEIHCQMAMDNPNFVETITSSIARLTQVNYTFIGIPEDQWADVRENFLHSHGSDADAEDGANPEAKKPAEDPFVAEAAKLVGEDLLEIKD
>NC_021837.1|WP_003722063.1|689888_690206_+|YbaB/EbfC-family-nucleoid-associated-protein
MRGMGNMQGMMKQMQKMQKEMAKAQADLEAQEFTGTAGGGMVTVKATGKRVITDVVINEEVVDPEDIEMLQDLVLAATNDVLKQIEDTTSQTMGKFTQGLNIPGM
>NC_021837.1|WP_003722062.1|690314_690911_+|recombination-protein-RecR
MHYPEPITKLIDSFMKLPGIGPKSAARLAFYVLDMKEDDVLDFAKALVDAKRNLSFCSVCGHITDKDPCYICADTSRDRSVICVVQESKDVIAMEKMRDFHGLYHVLHGTISPMDGIGPEDINIPDLLKRLQDDTIEEVILATNPNVEGEATAMYISRLLKPSGIKVTRIAHGLPVGGDLEYADEVTLSKAMEGRREV
>NC_021837.1|WP_003722061.1|690925_691171_+|YaaL-family-protein
MESRSNKFGRKKNKKIGKLHKSYDAYLMELIEVTQENWHKQKVLMRKSFEYDPNLEYEEKKAEARYFYLFKEARTRQLKNK
>NC_021837.1|WP_009931159.1|691216_692059_-|aldo/keto-reductase
MTLSFSDTYRLNNGIEMPRHGFGVYKLTDEARMRTALETAVDVGYRLFDTASFYHNEKELGDFFASSGLKRDEFFVTTKMWNTEQGYDETLRAFEKSQKKLQLDQIDLYLVHWPKQDTFFDTWRAVEKLYDEGLVRAIGVSNFEAHHLDRLRTSANVLPVVDQLETHPHFPNHLLHRYLEELHIVHQAWSPLGRGGVLQEQILIDLAEKHGKSPAQIVLRWHLQNNISIIPKSETPSRIRENAAIYDFELSEADMRQVERLNTGERVSHAPDVMYVRSEI
>NC_021837.1|WP_023548279.1|692179_693019_-|Cof-type-HAD-IIB-family-hydrolase
MTTQAIILDIDGTLLNDDKKISPETKKALITAQQNGVKLILASGRPTTGMHVYAEQLEMEKHHGLLVSYNGAKVVDCATNEELFNQALTVEEGKAVLEHMKQFKVKVMIDKEDYMYTNDVYDCYVPYRGEEINIIQYESRGGNFKLCEKDDLAAFLDYRLSKILTAGDPAYMQKNYQAMMAPFKDTLNCVFTADFYFEFTAQGIDKAKALDTVLTPMGIHAENIIAFGDGHNDITMVEYAGTGIAMQNAVAELKAAASSVTLSNNEDGIAHVLNSLIPS
>NC_021837.1|WP_023548281.1|693137_693989_-|MurR/RpiR-family-transcriptional-regulator
MNILIKIRELTNLTNSEKELANYILANPKKTLQFKPKELATAAFVSAATIYRLINKLGLNGIGELKIEIASSLRETSEEKDLNYDYPILESDTPYQIMTNLNQIYKGTIDETLNNADPEELVKIGEKLINAKTIDVYAASANLFFAQNFKFQMQEIGVLVNVPEEDYIQSLSAANSDENHIAIVVSYGGRSRTLQRVVKILSENNVDIILITSMQDNPLVEFATHKIYMASAENHYNKVSSFSTRQSLLSIFDTLYSIYFNQNYEKNIQYKTTNYQKMNTELE
>NC_021837.1|WP_009930438.1|694094_694469_-|PTS-dependent-dihydroxyacetone-kinase-phosphotransferase-subunit-DhaM
MAKPYGVVIISHSKDVAKGVHDIIKEIAPDVSITHAGGTEDGRIGTSFDAVNEAIENNEANKVYTFYDLGSAKMNIETVEEISEKEIILFNAPILEGAYATAAQVQMDEKPEVIAANLKTIEIK
>NC_021837.1|WP_012951102.1|694472_695069_-|dihydroxyacetone-kinase-subunit-L
MTYDKDWALRWLNDFGERVQENKQLLSDLDQAIGDGDHGINMARGLSELKKVFTEKEPADLKDVFKTAGMTMVSKVGGASGPLYGTAFLNMSKAVDADTIDAVGLTKVIEAGLEGIEKRGKSHAGEKTMIDVWEPVVHALHQEDLTDDVVDAALQKTKDLKATKGRASYLGERSIGHLDPGAYSSALLFHAMLQTEVS
>NC_021837.1|WP_003732079.1|695090_696080_-|dihydroxyacetone-kinase-subunit-DhaK
MKKILNGTDQVVEQMVEGLVKSHADVVHRVEGTRVIARNDKRPGKVGLVSGGGSGHEPAHAGYVGRGMLSAAVCGDVFTSPTPDQIYEGIKAADQGAGVLLIVKNYTGDVMNFEMAADLADADDIKVEQIVVDDDIAVEDSTFTTGRRGVAGTVLVHKIIGAAAEAGASLDELKALGEKVIASVKTLGVALSPCTVPEVGHPGFELGDDEIELGIGIHGEPGFTREKIMPSASLAKQLYERISNESKLLAGDKVVVLVNGMGATPLMEQYVFANDVHELLKNAGVQVAKTLVGDYMTSLEMAGLSLTILKLEDEKWVDMLKLPVDTIAW

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Crispr_ID: NC_021837_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_021837_3

790610-792163

TypeII

II-A,II-B

Consensus_repeat	Method
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	CRISPRCasFinder
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	CRT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	PILER-CR

23 spacers

csn2,cas2,cas1,cas9

The CRISPR arrays of NC_021837_3

>merge|NC_021837|3|790610-792163|CRISPRCasFinder,CRT,PILER-CR
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACCAAAGTGCTTTCTTCGATGACAACTGTTGCGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACACGGTAAATGGAATTTCTTCTTTATTAAGAGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACATGCGTTTGGTACAGTACCTTGAACAACGTGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACAGTCCAACAACCGCCTCCGTGTGTGTTTCTGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACCTTTCATCAAGTGTATTTTTTGCGACAAGAGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACATCAATCGACAATATAAATACGCATCATCTGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACATCAATCGACAATATAAATACGCATCATCTGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACTTTAGGGAAGCGCCCTTCTTCCCGTTGAAAGTTTTAGAGCTATGTTATTTTGAACGCTACCAAAACATACGAATTCTTTATCAAGGGTCAGAACGGGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACCCGATAGTTTTTTAAAAGTAACTTTACATTGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACCACTACATTCAAATATAAACCTTCACAAGCGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACCGTACTCGTTCGTCTCGTTAATGACGTACGGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACTGGCGATGCGTTGTTACCGATAGCTGAAATGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACATATGACCGGTTTGATTCTGGTTACTGGAAGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACCACGAGTATCCACACAATCACTATCCAAATGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACTTCTTTTCCTTTGATAACAGCTCTATAAGTGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACTTTAATTTCTTCCATCAGTCCAGCGGGAGCGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACATATTCAAATGAATCAACTAATACTTTTTTGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACTTTAGTTTATCAGTTTATCACAATGGAAGAGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACAACTACAATCAGAACCCTATCGACTTAGAAGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACTTGGTTTGATGAAGAACTATTCAGTTGCTTGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACACAATAAGATTTTTGAAGGGGATATAGGCTGTTTTAGAGCTATGTTATTTTGAATGCTACCAAAACTGTCTGAATGTAGTTGATATCTTTAACTTGGTTTTAGAGCTACATTATTCTGAATATCAACACATA

>NC_021837|3|3|790610-792163|CRISPRCasFinder
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	CAAAGTGCTTTCTTCGATGACAACTGTTGC
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	ACGGTAAATGGAATTTCTTCTTTATTAAGA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	ATGCGTTTGGTACAGTACCTTGAACAACGT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	AGTCCAACAACCGCCTCCGTGTGTGTTTCT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	CTTTCATCAAGTGTATTTTTTGCGACAAGA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	ATCAATCGACAATATAAATACGCATCATCT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	ATCAATCGACAATATAAATACGCATCATCT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TTTAGGGAAGCGCCCTTCTTCCCGTTGAAA
GTTTTAGAGCTATGTTATTTTGAACGCTACCAAAAC	ATACGAATTCTTTATCAAGGGTCAGAACGG
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	CCGATAGTTTTTTAAAAGTAACTTTACATT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	CACTACATTCAAATATAAACCTTCACAAGC
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	CGTACTCGTTCGTCTCGTTAATGACGTACG
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TGGCGATGCGTTGTTACCGATAGCTGAAAT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	ATATGACCGGTTTGATTCTGGTTACTGGAA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	CACGAGTATCCACACAATCACTATCCAAAT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TTCTTTTCCTTTGATAACAGCTCTATAAGT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TTTAATTTCTTCCATCAGTCCAGCGGGAGC
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	ATATTCAAATGAATCAACTAATACTTTTTT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TTTAGTTTATCAGTTTATCACAATGGAAGA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	AACTACAATCAGAACCCTATCGACTTAGAA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TTGGTTTGATGAAGAACTATTCAGTTGCTT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	ACAATAAGATTTTTGAAGGGGATATAGGCT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TGTCTGAATGTAGTTGATATCTTTAACTTG
GTTTTAGAGCTACATTATTCTGAATATCAACACATA

>NC_021837|3|2|790610-792163|CRT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	CAAAGTGCTTTCTTCGATGACAACTGTTGC
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	ACGGTAAATGGAATTTCTTCTTTATTAAGA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	ATGCGTTTGGTACAGTACCTTGAACAACGT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	AGTCCAACAACCGCCTCCGTGTGTGTTTCT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	CTTTCATCAAGTGTATTTTTTGCGACAAGA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	ATCAATCGACAATATAAATACGCATCATCT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	ATCAATCGACAATATAAATACGCATCATCT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TTTAGGGAAGCGCCCTTCTTCCCGTTGAAA
GTTTTAGAGCTATGTTATTTTGAACGCTACCAAAAC	ATACGAATTCTTTATCAAGGGTCAGAACGG
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	CCGATAGTTTTTTAAAAGTAACTTTACATT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	CACTACATTCAAATATAAACCTTCACAAGC
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	CGTACTCGTTCGTCTCGTTAATGACGTACG
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TGGCGATGCGTTGTTACCGATAGCTGAAAT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	ATATGACCGGTTTGATTCTGGTTACTGGAA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	CACGAGTATCCACACAATCACTATCCAAAT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TTCTTTTCCTTTGATAACAGCTCTATAAGT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TTTAATTTCTTCCATCAGTCCAGCGGGAGC
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	ATATTCAAATGAATCAACTAATACTTTTTT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TTTAGTTTATCAGTTTATCACAATGGAAGA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	AACTACAATCAGAACCCTATCGACTTAGAA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TTGGTTTGATGAAGAACTATTCAGTTGCTT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	ACAATAAGATTTTTGAAGGGGATATAGGCT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TGTCTGAATGTAGTTGATATCTTTAACTTG
GTTTTAGAGCTACATTATTCTGAATATCAACACATA

>NC_021837|3|2|791072-792097|PILER-CR
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TTTAGGGAAGCGCCCTTCTTCCCGTTGAAA
GTTTTAGAGCTATGTTATTTTGAACGCTACCAAAAC	ATACGAATTCTTTATCAAGGGTCAGAACGG
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	CCGATAGTTTTTTAAAAGTAACTTTACATT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	CACTACATTCAAATATAAACCTTCACAAGC
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	CGTACTCGTTCGTCTCGTTAATGACGTACG
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TGGCGATGCGTTGTTACCGATAGCTGAAAT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	ATATGACCGGTTTGATTCTGGTTACTGGAA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	CACGAGTATCCACACAATCACTATCCAAAT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TTCTTTTCCTTTGATAACAGCTCTATAAGT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TTTAATTTCTTCCATCAGTCCAGCGGGAGC
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	ATATTCAAATGAATCAACTAATACTTTTTT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TTTAGTTTATCAGTTTATCACAATGGAAGA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	AACTACAATCAGAACCCTATCGACTTAGAA
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	TTGGTTTGATGAAGAACTATTCAGTTGCTT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	ACAATAAGATTTTTGAAGGGGATATAGGCT
GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NC_021837.1\|WP_003733022.1\|796304_797333_+\|Mrp/NBP35-family-ATP-binding-protein	unknown	unknown	gnl\|CDD\|378455
NC_021837.1\|WP_023548322.1\|783630_784110_+\|hypothetical-protein	unknown	unknown	unknown
NC_021837.1\|WP_014602247.1\|793616_794468_+\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381359
NC_021837.1\|WP_023548325.1\|789818_790481_+\|type-II-A-CRISPR-associated-protein-Csn2	csn2	cd09758_csn2_CAS-II-A	gnl\|CDD\|213408
NC_021837.1\|WP_023548329.1\|794509_796036_-\|GW-domain-containing-glycosaminoglycan-binding-protein	unknown	unknown	gnl\|CDD\|224619
NC_021837.1\|WP_003733027.1\|789487_789829_+\|CRISPR-associated-endonuclease-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226043
NC_021837.1\|WP_023548321.1\|780850_781648_+\|energy-coupling-factor-transporter-transmembrane-protein-EcfT	unknown	unknown	gnl\|CDD\|223692
NC_021837.1\|WP_009932866.1\|793172_793595_+\|MerR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|133384
NC_021837.1\|WP_023548323.1\|784619_788624_+\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	COG3513_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226044
NC_021837.1\|WP_003727703.1\|782594_783032_+\|50S-ribosomal-protein-L13	unknown	unknown	gnl\|CDD\|181703
NC_021837.1\|WP_003723652.1\|783053_783446_+\|30S-ribosomal-protein-S9	unknown	unknown	gnl\|CDD\|178888
NC_021837.1\|WP_009931305.1\|805640_806483_-\|S-adenosyl-l-methionine-hydroxide-adenosyltransferase-family-protein	unknown	unknown	gnl\|CDD\|224824
NC_021837.1\|WP_003723285.1\|809968_810445_+\|DUF1641-domain-containing-protein	unknown	unknown	gnl\|CDD\|225283
NC_021837.1\|WP_014602250.1\|779981_780848_+\|energy-coupling-factor-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|237454
NC_021837.1\|WP_003733258.1\|804111_805593_+\|multidrug-efflux-MFS-transporter	unknown	unknown	gnl\|CDD\|129794
NC_021837.1\|WP_010990023.1\|806981_809969_+\|formate-dehydrogenase-subunit-alpha	unknown	unknown	gnl\|CDD\|225918
NC_021837.1\|WP_023548327.1\|792688_793051_+\|hypothetical-protein	unknown	unknown	unknown
NC_021837.1\|WP_023548324.1\|788624_789491_+\|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|187851
NC_021837.1\|WP_003723289.1\|803123_804011_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NC_021837.1\|WP_003733032.1\|781653_782400_+\|tRNA-pseudouridine(38-40)-synthase-TruA	unknown	unknown	gnl\|CDD\|234577

Protein	Function_ID	Function_description	E-value
NC_021837.1\|WP_003733022.1\|796304_797333_+\|Mrp/NBP35-family-ATP-binding-protein	gnl\|CDD\|378455	pfam10609, ParA, NUBPL iron-transfer P-loop NTPase. This family contains ATPases involved in plasmid partitioning. It also contains the cytosolic Fe-S cluster assembling factor NBP35 which is required for biogenesis and export of both ribosomal subunits.	3.84035e-115
NC_021837.1\|WP_003723652.1\|783053_783446_+\|30S-ribosomal-protein-S9	gnl\|CDD\|178888	PRK00132, rpsI, 30S ribosomal protein S9; Reviewed.	4.44953e-85
NC_021837.1\|WP_023548321.1\|780850_781648_+\|energy-coupling-factor-transporter-transmembrane-protein-EcfT	gnl\|CDD\|223692	COG0619, CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters [Inorganic ion transport and metabolism].	4.09391e-53
NC_021837.1\|WP_023548325.1\|789818_790481_+\|type-II-A-CRISPR-associated-protein-Csn2	gnl\|CDD\|213408	cd09758, Csn2, CRISPR/Cas system-associated protein Csn2. Csn2 is a Nmeni subtype-specific Cas protein, which may function in the adaptation process which mediates the incorporation of foreign nucleic acids into the microbial host genome. Csn 2 may interact directly with double-stranded DNA. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA. Csn2 has been predicted to be a functional analog of Cas4 based on anti-correlated phyletic patterns; also known as SPy1049 family.	1.58789e-114
NC_021837.1\|WP_023548329.1\|794509_796036_-\|GW-domain-containing-glycosaminoglycan-binding-protein	gnl\|CDD\|224619	COG1705, FlgJ, Muramidase (flagellum-specific) [Cell motility and secretion / Intracellular trafficking and secretion].	3.89328e-69
NC_021837.1\|WP_014602247.1\|793616_794468_+\|aldo/keto-reductase	gnl\|CDD\|381359	cd19133, AKR_AKR5F1, the AKR5F family of aldo-keto reductase (AKR). Klebsiella sp. 2,5-diketo-D-gluconic acid reductase (2,5-DKG reductase) is a founding member of aldo-keto reductase family 5 member F1 (AKR5F1). It catalyzes the reduction of 2,5-diketo-D-gluconic acid (25DKG) to 2-keto-L-gulonic acid (2KLG).	1.21419e-171
NC_021837.1\|WP_009932866.1\|793172_793595_+\|MerR-family-transcriptional-regulator	gnl\|CDD\|133384	cd01109, HTH_YyaN, Helix-Turn-Helix DNA binding domain of the MerR-like transcription regulators YyaN and YraB. Putative helix-turn-helix (HTH) MerR-like transcription regulators of Bacillus subtilis, YyaN and YraB, and related proteins; N-terminal domain. Based on sequence similarity, these proteins are predicted to function as transcription regulators that mediate responses to stress in eubacteria. They belong to the MerR superfamily of transcription regulators that promote transcription of various stress regulons by reconfiguring the operator sequence located between the -35 and -10 promoter elements. A typical MerR regulator is comprised of distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their N-terminal domains are homologous and contain a DNA-binding winged HTH motif, while the C-terminal domains are often dissimilar and bind specific coactivator molecules such as metal ions, drugs, and organic substrates.	1.95207e-42
NC_021837.1\|WP_023548323.1\|784619_788624_+\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	gnl\|CDD\|226044	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms].	0
NC_021837.1\|WP_003727703.1\|782594_783032_+\|50S-ribosomal-protein-L13	gnl\|CDD\|181703	PRK09216, rplM, 50S ribosomal protein L13; Reviewed.	2.08607e-102
NC_021837.1\|WP_023548324.1\|788624_789491_+\|type-II-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|187851	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer intergration. Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	1.40242e-129
NC_021837.1\|WP_009931305.1\|805640_806483_-\|S-adenosyl-l-methionine-hydroxide-adenosyltransferase-family-protein	gnl\|CDD\|224824	COG1912, COG1912, Uncharacterized conserved protein [Function unknown].	4.67495e-126
NC_021837.1\|WP_003723285.1\|809968_810445_+\|DUF1641-domain-containing-protein	gnl\|CDD\|225283	COG2427, COG2427, Uncharacterized conserved protein [Function unknown].	1.26483e-27
NC_021837.1\|WP_014602250.1\|779981_780848_+\|energy-coupling-factor-ABC-transporter-ATP-binding-protein	gnl\|CDD\|237454	PRK13634, cbiO, cobalt transporter ATP-binding subunit; Provisional.	0
NC_021837.1\|WP_003733258.1\|804111_805593_+\|multidrug-efflux-MFS-transporter	gnl\|CDD\|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	1.77224e-108
NC_021837.1\|WP_010990023.1\|806981_809969_+\|formate-dehydrogenase-subunit-alpha	gnl\|CDD\|225918	COG3383, COG3383, Uncharacterized anaerobic dehydrogenase [General function prediction only].	0
NC_021837.1\|WP_003733027.1\|789487_789829_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	1.15214e-45
NC_021837.1\|WP_003723289.1\|803123_804011_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	2.88589e-15
NC_021837.1\|WP_003733032.1\|781653_782400_+\|tRNA-pseudouridine(38-40)-synthase-TruA	gnl\|CDD\|234577	PRK00021, truA, tRNA pseudouridine(38-40) synthase TruA.	2.82266e-128

>NC_021837.1|WP_023548325.1|789818_790481_+|type-II-A-CRISPR-associated-protein-Csn2
MNFNFKLLDEPITIEDSTIFVIEDVRVFANVAKLFYQYDETEELKVFNTKQHPLKSSELMLVTDILGHDINSAATLKLIYTDLEQQLNEKPEVKSMIDKLTATISELIGYELLEHELDLEEDEITVIELFKALGIKIETKSDTVFEKLIEIVQVYKYLSKKKLLVLINVCSYLTEEELLELRRYISLYQVKVLFIEPRKIKGSPQVTLDSDYFLHVENSI
>NC_021837.1|WP_003733027.1|789487_789829_+|CRISPR-associated-endonuclease-Cas2
MSYRYMRMLLMFDMPTDTAKERKAYRQFRRFILSEGFIMHQYSVYSKILLNGTASKAMLARLKQQNPKKGLITLLTVTEKQFARMVYLSGEQNKSVGNSDARLIFLGDAIDEF
>NC_021837.1|WP_023548324.1|788624_789491_+|type-II-CRISPR-associated-endonuclease-Cas1
MGWRTVVVNSHSKLSYKNQHLVFKSAYQHEMIHLSEIDVLILETTDITLTTMLINCLVSENILILFCDDKRLPIGKVLPFYGRHDSSLQLSKQLGWDSELKSEVWTEIISQKILNQSTFLSMLDYDEKADSLIKLHETLEMFDPTNREGHAARIYFNQLFGNDFTREQENDINSGLNYGYTLLLSIFARELVKSGCMTQFGLKHSNQFNDFNFASDIMEPFRPLVDQIVYEKRAEDFQVIKRSLFELFNKQFDYNDQHMFLTNIASDYTKKVVKVLNEEREGVPEFRI
>NC_021837.1|WP_023548323.1|784619_788624_+|type-II-CRISPR-RNA-guided-endonuclease-Cas9
MKNPYTIGLDIGTNSVGWAVLTNQYDLVKRKMKVAGNSDKKQIKKNFWGVRLFDDGQTAVDRRMNRTARRRIERRRNRISYLQEIFAVEMANIDANFFCRLNDSFYVDSEKRNSRHPFFATIEEEVAYHKNYRTIYHLREELVNSSEKADLRLVYLALAHIIKYRGNFLIEGALDTKNTSVDGVYEQFILTYNQVFMSNIEEGTLAKVEENIEVANILAGKFTRREKFERILQLYPGEKSTGMFAQFISLIVGSKGNFQKVFDLIEKTDIECAKDSYEEDLETLLAIIGDEYAELFVAAKNTYNAVVLSSIITVTDTETNAKLSASMIERFDAHEKDLVELKAFIKLNLPKQYEEIFSNAAIDGYAGYIDGKTKQVDFYKYLKTTLENVEGADYFITKIEEENFLRKQRTFDNGVIPHQLHLEELEAILHQQAKYYPFLREDYEKIKSLVTFRIPYFVGPLAKGQSEFAWLTRKADGEIRPWNIEEKVDFGKSAVDFIEKMTNKDTYLPKENVLPKHSLCYQKYMVYNELTKIRYIDDQGKTNYFSGQEKQQIFNDLFKQKRKVKKKDLELFLRNINHVESPTIEGLEDSFNASYATYHDLMKVGIKQEILDNPLNTEMLEDIVKILTVFEDKRMIKEQLQQFSDVLDGTVLKKLERRHYTGWGRLSAKLLVGIRDKQSHLTILDYLMNDDGLNRNLMQLINDSNLSFKSIIEKEQVSTADKDLQSIVADLAGSPAIKKGILQSLKVVEELVSVMGYPPQTIVVEMARENQTTNKGKNNSKPRYKSLEKAIKEFGSQILKEHPTDNQELKNNRLYLYYLQNGKDMYTGQELDIHNLSNYDIDHIVPQSFITDNSIDNLVLTSSAGNREKGDNVPPLEIVQKRKIFWEKLYQGNLMSKRKFDYLTKAERGGLTEADKARFIHRQLVETRQITKNVANILHQRFNYKTDDNEDTMEPVRIVTLKSALVSQFRKQFQLYKVREVNDYHHAHDAYLNGVVANTLLKVYPQLEPEFVYGEYHQFDWFKANKATAKKQFYTNIMLFFAQKERIIDENGEILWDKKYLETIKKVLNYRQMNIVKKTEIQKGEFSNQNPKPRGDSSKLIPKKTNLNPIKYGGFEGSNMAYAIIIEHEKRKKKVTIEKKLIQINIMERKAFEKDEKVFLEGKGYHQPKVLTKLPKYALYECENGRRRMLGSANEVHKGNQMLLPNHLMTLLYHAEKREAIDGESLAYIEAHKAVFGELLAHISEFARKYTLANDKLDEINMLYERNKDGDVKSIAESFVSLKKFNAFGVHKDFNFFGTTIKRKRDRKLKELLNSTIIYQSITGLYESRKRLDS
>NC_021837.1|WP_023548322.1|783630_784110_+|hypothetical-protein
MKSLIIHKMHSSYFTNMSEVFNLLPEGELNCMWLVSSYECNIYPSEQIPFDKDYVWLKGTKLKEILNQKEIMFIWGNFTSYSSDTELKDVLKYLIPFADGNKDLWGKNVQLSNPLSNTELISWDSSIFLALSKNTSIIELLKANYPDSEDLSMYNSDID
>NC_021837.1|WP_003723652.1|783053_783446_+|30S-ribosomal-protein-S9
MAQVQYYGTGRRKSSVARVRLVPGDGKIVINNRDWEDYIPFAALREVIKQPLVATETLGNYDVLVNVHGGGYTGQAGAIRHGVARALLQVAPEYRPALKSAGLLTRDSRMKERKKPGLKGARRAPQFSKR
>NC_021837.1|WP_003727703.1|782594_783032_+|50S-ribosomal-protein-L13
MRTTYMAKPGEVERKWYVIDATGVSLGRLSSEVASILRGKNKPQFTPHIDTGDFVIIINAGKIGLTGKKATDKIYYRHSQYPGGLKSRTAGEMRTNNPEKLLELSIKGMLPKNSLGRQLFKKLHVYGGSEHEHAAQQPEVYELRG
>NC_021837.1|WP_003733032.1|781653_782400_+|tRNA-pseudouridine(38-40)-synthase-TruA
MTRYKAIISYDGSGFYGYQVQPNTRTVQAEIEKALTKMHKGKTVRVTASGRTDTGVHAKGQVIHFDSELDITAEKFQKALQVMTPFDISFLTVEEVPDDFHARFGTVGKEYRYVVKRTKIFDPFSRNFALHYPYELDISKMKLASKRLIGEHDFTSFCSARTERDSKVRTLYSIDFYEEDDETLVIAFQGNGFLYNMVRILTGTLLDAGQGRISPDDISEALLARDRQKLISKTAPPQGLYLWRVDYE
>NC_021837.1|WP_023548321.1|780850_781648_+|energy-coupling-factor-transporter-transmembrane-protein-EcfT
MMDKMILGRYIPGNSWLHRIDPRAKITAVMAFIAIVFLANNWLTYALMFAYVLYLVLTSKVPFLFFIKGLQPIFWLILITLLLQVFFTKGGTVLVDLGLLQITTLGLANGAMMFCRFVLIIFMTTLLTLTTSPIELTDGLEKILAPFRLVHLPVHELALMLSISLRFIPTLMDETEKILKAQKARGVEFTSGKWSDRIKAIIPLLVPLFISAFKRAEDLAIAMEARGYRGGKGRTRFRLLRWRFADTFLLISLAVLSGLLFWLRS
>NC_021837.1|WP_014602250.1|779981_780848_+|energy-coupling-factor-ABC-transporter-ATP-binding-protein
MEIKLEQLGYCYQKNSPFEKRALLDVNVSFDSGSYSAIIGHTGSGKSTLLQHLNALLMPTEGKITVGDREIVAGVKQKKLRDLRKKVGIVFQFPEAQLFEETVEKDICFGPMNFGVSEEDAKLRAKKVIYEVGLTEEILSRSPFELSGGQMRRVAIAGVLAMDPEVLVLDEPTAGLDPHGREEIMEMFYNLHKEKGLTTVLVTHSMEDAARYAEKIVLMKAGTVLQIGTPREIFAKPDELVDLGLSVPDVVRFQGLFERKFDVKLTKTCLTIDELTSEMAPYLAKGGA
>NC_021837.1|WP_023548327.1|792688_793051_+|hypothetical-protein
MKKTSIIFTFCALLLTACSTTTKEIPRQTTEATGTIEQVETESILIKNFKIKNDNNTPELSVRFHISEKYHDETGNKIKRTELNKNDNIKIILTKDFQIQETSPAQIDPKYVQKIILLNK
>NC_021837.1|WP_009932866.1|793172_793595_+|MerR-family-transcriptional-regulator
MNIKQAADMFGLTVDTLRYYERVGVIPPVHRNESGYRDYKTSDLNWVYLVKNLRNAGLSVESLIEFATLAQLRETQNVEAAQKQVLVDQLKELDEKLAEMKQVRDLLVYKIDSYDSHIAQFKAGELNADNVEKLWERDKF
>NC_021837.1|WP_014602247.1|793616_794468_+|aldo/keto-reductase
MKTVKLNNGVEVPILGFGTYQITDAAEAEQAVKDAIKAGYRHIDTAQSYMNEEAVGRGIAASGVDRKELFITTKIWVENVSYKGVMSSFDRSLKRLGLDYVDLLLIHQPFNDVYGAWIAMEELQASGKIRAIGVSNFSPDRVIDLAAFNEVTPQVNQIEVNPFQQQTANLAILRKEGVAIEAWAPFAEGKNDIFNNPVLTKIGAKYGKSAAQVILRWLVEQDIIVLAKSVKPERMAQNLAIFDFELTEADKEEIAGLNQGESQFFSHADPEMVKWMASRKLNV
>NC_021837.1|WP_023548329.1|794509_796036_-|GW-domain-containing-glycosaminoglycan-binding-protein
MDRKFIKPGIILLIVAFLVVSINVGAETGGSRTAQVNLTTSQQAFIDEILPAAQDGYRDGKLLTSVTLAQAILESNWGESGLSQNSNNLFGIKGTYKGKSVSMGTMEASGSTTANFRVYPSWKESIEDHTALITENARYQDAVGETNYRKALQAIKDGGYATDPDYVSKLVAIIERYNLDKYDVIYDKIDSNQSLAAIGTVAENKKQEVIWSAPYNTEDANKIGTLENYSGRNLEISWEAKTEKGLWYFIRENNKDIGWVNSNALKINYHQKEDENVHLTKYVDDLSAHVYRLPSPEKQFDNGTIAKYDRKALQVDKKITRGGYAWFRISEGEKVIGWVRADKLNDRLYDRITEQTSYDGYALVSKSATDNVWTAPFNTKNAEKLAPLADYNNEKLEIVTRAKAGNTLWYQFKVDGKLVGWASEKDLNVFYTPAKEEPVKQVAYVKDPTVKLYNKPVESTSTNPKAVGFYYGKLLAVDKTATILGEDWLHLKDSQNSLGWIKAIDINS
>NC_021837.1|WP_003733022.1|796304_797333_+|Mrp/NBP35-family-ATP-binding-protein
MLNEQQITRLLYRLQDPVLEASLEETEGVLEVQVLEETANIKIALADPAVETDHFVHNIEELLTQFGVNEINIELEYLPAAVIDRIFQARDNILSEASETKFLAIASGKGGVGKSTVSANLAIALAQQGKKVGLLDADIYGFSIPVLLGTTESPHKENGQIIPVETHGIQMISMDFFVEQGEPVIWRGPMLGKMIKMFLEEVRWGKLDYLLIDLPPGTGDVALDIHTLIPKCNELIVTTPHYAAASVASRAGYMAAKNNHKIIGVIENMSYLTLADGQVLKVFGQGGGEKVAADLETQLLIQLPIEQPEPNGNGYVSALFNSSSTSGKAYKTLAEKIIPYLS
>NC_021837.1|WP_003723289.1|803123_804011_+|TetR/AcrR-family-transcriptional-regulator
MKEKKQRIIKSAKEVFQKQGYLKTSVQDMVDAAGISKGTFYNYFTSKEELAIVIFKQEYSVLHQRLEYTMAQDGAKKDNFTECLKIIIHFYTENGEILNITFSQTMIDDDFNAFLQNVRLKNMEWVKYQLLEVYGEETKPYINDITMLLSGMAAMYVFASGSKNVNTGLIERAIPYVVRRLDALVKDILESGEIVFTEADTENLVPDQTMIRKKRLAKLREALEELNVGIENADIADSDKWQYKESMNALVGEINNNEAPRDFMVQGTLLYLKQHVPASLTKEVNKLEACVNGLL
>NC_021837.1|WP_003733258.1|804111_805593_+|multidrug-efflux-MFS-transporter
MNSTAVERPVDVNGKSYSRSLLVVTMIIGAFVAILNQTLLATALPMIMDDLHITAATGQWLTTAFLLTNGIMIPITALLIEKISSKTLFITAMTVFTIGTIIASVAGSFPILLTGRIVQAAGAGIMMPLLQTIFLLIFPREKRGAAMGLMGLVIAFAPAIGPTLSGWIVDSYDWRVLFLILIPIAVIDIILAFFGMKKVVKLTDTKIDFLSIVMSSIGFGALLYGFSSAGNDGWGDTTVITMLIVGVVVIALFVWRQLVIDNPMLELHVFKYPVFSLSVILGSIVTMAMIGAEIVLPLYIQTIRGESALQSGLLLLPGAIIMGIMSPITGIIFDKIGAKWLTITGVTILTIGTIPFMFLTMDTPLWYIVVFYAVRFFGISMAMMPVSTAGMNALPNHLINHGSAVNNTIRQIAGSIGTAVLITVLTNVTKDNMPGKALMATDPASFAQKAQDASLDGMRAAFMVAAIFAAIGMILSLFLKTKKQEPIVKEYTK
>NC_021837.1|WP_009931305.1|805640_806483_-|S-adenosyl-l-methionine-hydroxide-adenosyltransferase-family-protein
MTKQLLVLQSDFGISDGAVSAMYGVINSVSIDLQIYDLTHQIPQFNIWEASYRLLQTVTYWPEDTIFVSIVDPGVGSKRRSVAVLTEDGHYIITPDNGTLTHIAHYGTIKAVRLIDEEKNRLPKSGASHTFHGRDIFAYTAARLAAGVINFEDIGPAANPDSIVSLSLSDSYLEGDQAFGTIDIIDRPFGNLWTNIRRTDFFELGANYGDSIEVLIKHHDRIVYKNFVTYSRSFADLRIGEALIYVNSLDNLGLGINQGSFVDAYSVGTGTSWKVTLKKV
>NC_021837.1|WP_010990023.1|806981_809969_+|formate-dehydrogenase-subunit-alpha
MGAKVSVQINGVARDVVEGTRMLDYLNAEGIQHPHICYSEQIGPIQSCDTCMCEVDGELMRACSTNLTDGMEIKTNSELAKDAQLEAMDRILENHLLYCTVCDNNNGNCKVHNTTELLGVEKQERPYREKGYLNDFSHPFYRYDPDQCILCGRCVEACQQVQVNETLSIDWERSQPRVIWDDDRPANLSSCVSCGLCATVCPCNALMEKSMLGQAGFMTGLDEDMLEPMIDMVKKVEPNYQTVFAVSEMEASMRETRTKKTKTVCTFCGVGCTFEVWTKDRKILKVEPTGEGPVNKFATCVKGKFGWDFVNSEKRITTPLIREGNEFVPASWEDAIHLVATKLREIQAKYGNDSLGFISSSKTTNEENYLMQKLARQVFETNNIDNCSRYCQAPASDGLTRTVGIGADSGTVEDIESAGLVIIVGASPADGHPVLASRIKRAQKTRGQKLIVSDLRKHEMAERSDLFIHPKQGTDFVWLTAVAKYMIDQGWHDEVFMENRISNVADYLAFLEPFTLEYAEKETGLSVETLKKVAQMVHEADGTAVCWGMGVTQNIAGSHTSSAIANLLLVTGNFGRHGAGAYPLRGHNNVQGACDMGSLPNVLPGIQPLGNDEVRARFEEAYGVSISSEPGLKNNEMLDAIEAGTLHSMYVIGEEMAWVDSNSNHVQEILASLDFFVVQDVFLSKTAQFADVVFPAAPSLEKEGTFTNTERRVQRLYEVLEPLGDSKPDWWIIQEVARACGRTDWNYDHPSEIMDEIASLAPFFAGVRYDRMQGFNSLVWPVSADGKDMPLLYEERFNFPDGKAQFSTLPYIAPITFPEEYNLTLNNGRLLEQFHEGNLTDKSKGLDYKLPEVFVEVSHELAKERDLESGSLVRLSSPYGRIKLRAVVTDRMKGNEVYVPMHSVSSETAVNLLTSSAGDVRTKTPAYKQTKVNLTVLEKTGKNPLPDHNPRNRKRFPQNGAEVARKWSREDYQPISKVNCACGGNCGCGGKGRNH
>NC_021837.1|WP_003723285.1|809968_810445_+|DUF1641-domain-containing-protein
MAEPISTIRDTKKTPEELEKERLEQMKADIAEQDSGFIEILETVKLLQESGALEALNSAIKARGDITKTFLNEWRKEPMTNAINNMMISSKLLTDTKPEQTEEMIANLKNAAKKAEESAKNDEIMGMLAMMKALKDPDINRALRYGVTFLKEVGQTLK

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NC_021837_1	1.9\|10819\|36\|NC_021837\|CRT	10819-10854	36	NC_021837.1	2228264-2228299	0	1.0
NC_021837_1	1.3\|10883\|36\|NC_021837\|PILER-CR,CRISPRCasFinder	10883-10918	36	NC_021837.1	2208511-2208546	1	0.972
NC_021837_1	1.8\|10755\|35\|NC_021837\|CRT	10755-10789	35	NC_021837.1	1108217-1108251	1	0.971
NC_021837_1	1.10\|10884\|35\|NC_021837\|CRT	10884-10918	35	NC_021837.1	2208512-2208546	1	0.971

1. spacer 1.9|10819|36|NC_021837|CRT matches to position: 2228264-2228299, mismatch: 0, identity: 1.0

ttaatttgatagtcataatttatttcctcctatttt	CRISPR spacer
ttaatttgatagtcataatttatttcctcctatttt	Protospacer
************************************

2. spacer 1.3|10883|36|NC_021837|PILER-CR,CRISPRCasFinder matches to position: 2208511-2208546, mismatch: 1, identity: 0.972

tatagaaaggagttgatacagtgaaggatgttttag	CRISPR spacer
tatagaaaggagttgagacagtgaaggatgttttag	Protospacer
**************** *******************

3. spacer 1.8|10755|35|NC_021837|CRT matches to position: 1108217-1108251, mismatch: 1, identity: 0.971

gaaattgtaaaatctatatccgttgattcaacaaa	CRISPR spacer
gaaattgtaaaatctgtatccgttgattcaacaaa	Protospacer
***************.*******************

4. spacer 1.10|10884|35|NC_021837|CRT matches to position: 2208512-2208546, mismatch: 1, identity: 0.971

atagaaaggagttgatacagtgaaggatgttttag	CRISPR spacer
atagaaaggagttgagacagtgaaggatgttttag	Protospacer
*************** *******************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NC_021837_1	1.8\|10755\|35\|NC_021837\|CRT	10755-10789	35	DQ003642	Listeria phage A006, complete genome	15712-15746	0	1.0
NC_021837_1	1.9\|10819\|36\|NC_021837\|CRT	10819-10854	36	MT500540	Listeria phage LP-HM00113468, complete genome	683-718	0	1.0
NC_021837_1	1.9\|10819\|36\|NC_021837\|CRT	10819-10854	36	NC_009812	Listeria phage B025, complete genome	3896-3931	0	1.0
NC_021837_1	1.9\|10819\|36\|NC_021837\|CRT	10819-10854	36	KJ094023	Listeria phage LP-101, complete genome	3936-3971	0	1.0
NC_021837_1	1.14\|11140\|35\|NC_021837\|CRT	11140-11174	35	NZ_LR134403	Listeria monocytogenes strain NCTC7974 plasmid 6, complete sequence	214611-214645	0	1.0
NC_021837_1	1.14\|11140\|35\|NC_021837\|CRT	11140-11174	35	MT500540	Listeria phage LP-HM00113468, complete genome	39834-39868	0	1.0
NC_021837_1	1.14\|11140\|35\|NC_021837\|CRT	11140-11174	35	KJ094023	Listeria phage LP-101, complete genome	5084-5118	0	1.0
NC_021837_3	3.3\|790778\|30\|NC_021837\|CRISPRCasFinder,CRT	790778-790807	30	KJ094027	Listeria phage LP-083-1 contig 1, partial genome	9525-9554	0	1.0
NC_021837_3	3.3\|790778\|30\|NC_021837\|CRISPRCasFinder,CRT	790778-790807	30	DQ003641	Listeria phage P35, complete genome	9248-9277	0	1.0
NC_021837_1	1.1\|10754\|36\|NC_021837\|PILER-CR,CRISPRCasFinder	10754-10789	36	DQ003642	Listeria phage A006, complete genome	15711-15746	1	0.972
NC_021837_1	1.2\|10818\|37\|NC_021837\|PILER-CR,CRISPRCasFinder	10818-10854	37	NC_009812	Listeria phage B025, complete genome	3896-3932	1	0.973
NC_021837_1	1.2\|10818\|37\|NC_021837\|PILER-CR,CRISPRCasFinder	10818-10854	37	KJ094023	Listeria phage LP-101, complete genome	3936-3972	1	0.973
NC_021837_1	1.2\|10818\|37\|NC_021837\|PILER-CR,CRISPRCasFinder	10818-10854	37	MT500540	Listeria phage LP-HM00113468, complete genome	682-718	1	0.973
NC_021837_1	1.3\|10883\|36\|NC_021837\|PILER-CR,CRISPRCasFinder	10883-10918	36	NC_021539	Listeria phage LP-030-2, complete genome	18926-18961	1	0.972
NC_021837_1	1.3\|10883\|36\|NC_021837\|PILER-CR,CRISPRCasFinder	10883-10918	36	KJ094023	Listeria phage LP-101, complete genome	22882-22917	1	0.972
NC_021837_1	1.5\|11010\|36\|NC_021837\|PILER-CR,CRISPRCasFinder	11010-11045	36	MH341453	Listeria phage PSU-VKH-LP041, complete genome	10139-10174	1	0.972
NC_021837_1	1.7\|11139\|36\|NC_021837\|PILER-CR,CRISPRCasFinder	11139-11174	36	NZ_LR134403	Listeria monocytogenes strain NCTC7974 plasmid 6, complete sequence	214611-214646	1	0.972
NC_021837_1	1.7\|11139\|36\|NC_021837\|PILER-CR,CRISPRCasFinder	11139-11174	36	MT500540	Listeria phage LP-HM00113468, complete genome	39833-39868	1	0.972
NC_021837_1	1.7\|11139\|36\|NC_021837\|PILER-CR,CRISPRCasFinder	11139-11174	36	KJ094023	Listeria phage LP-101, complete genome	5084-5119	1	0.972
NC_021837_1	1.9\|10819\|36\|NC_021837\|CRT	10819-10854	36	NZ_LR134403	Listeria monocytogenes strain NCTC7974 plasmid 6, complete sequence	213463-213498	1	0.972
NC_021837_1	1.10\|10884\|35\|NC_021837\|CRT	10884-10918	35	NC_021539	Listeria phage LP-030-2, complete genome	18926-18960	1	0.971
NC_021837_1	1.10\|10884\|35\|NC_021837\|CRT	10884-10918	35	KJ094023	Listeria phage LP-101, complete genome	22882-22916	1	0.971
NC_021837_1	1.12\|11011\|35\|NC_021837\|CRT	11011-11045	35	MH341453	Listeria phage PSU-VKH-LP041, complete genome	10139-10173	1	0.971
NC_021837_3	3.12\|791372\|30\|NC_021837\|CRISPRCasFinder,CRT,PILER-CR	791372-791401	30	MH341452	Listeria phage PSU-VKH-LP040, complete genome	37019-37048	1	0.967
NC_021837_3	3.15\|791570\|30\|NC_021837\|CRISPRCasFinder,CRT,PILER-CR	791570-791599	30	NC_009813	Listeria phage B054, complete genome	30224-30253	1	0.967
NC_021837_1	1.2\|10818\|37\|NC_021837\|PILER-CR,CRISPRCasFinder	10818-10854	37	NZ_LR134403	Listeria monocytogenes strain NCTC7974 plasmid 6, complete sequence	213463-213499	2	0.946
NC_021837_1	1.3\|10883\|36\|NC_021837\|PILER-CR,CRISPRCasFinder	10883-10918	36	NC_009812	Listeria phage B025, complete genome	23381-23416	2	0.944
NC_021837_1	1.5\|11010\|36\|NC_021837\|PILER-CR,CRISPRCasFinder	11010-11045	36	NC_009813	Listeria phage B054, complete genome	10139-10174	2	0.944
NC_021837_1	1.10\|10884\|35\|NC_021837\|CRT	10884-10918	35	NC_009812	Listeria phage B025, complete genome	23381-23415	2	0.943
NC_021837_1	1.12\|11011\|35\|NC_021837\|CRT	11011-11045	35	NC_009813	Listeria phage B054, complete genome	10139-10173	2	0.943
NC_021837_1	1.14\|11140\|35\|NC_021837\|CRT	11140-11174	35	NC_009812	Listeria phage B025, complete genome	5044-5078	2	0.943
NC_021837_3	3.9\|791174\|30\|NC_021837\|CRISPRCasFinder,CRT,PILER-CR	791174-791203	30	KJ094028	Listeria phage LP-083-1 contig 2, partial genome	16035-16064	2	0.933
NC_021837_3	3.9\|791174\|30\|NC_021837\|CRISPRCasFinder,CRT,PILER-CR	791174-791203	30	DQ003641	Listeria phage P35, complete genome	31970-31999	2	0.933
NC_021837_3	3.15\|791570\|30\|NC_021837\|CRISPRCasFinder,CRT,PILER-CR	791570-791599	30	MH341453	Listeria phage PSU-VKH-LP041, complete genome	30881-30910	2	0.933
NC_021837_3	3.16\|791636\|30\|NC_021837\|CRISPRCasFinder,CRT,PILER-CR	791636-791665	30	NC_009813	Listeria phage B054, complete genome	41106-41135	2	0.933
NC_021837_3	3.22\|792032\|30\|NC_021837\|CRISPRCasFinder,CRT,PILER-CR	792032-792061	30	MH341451	Listeria phage PSU-VKH-LP019, complete genome	33369-33398	2	0.933
NC_021837_3	3.23\|792098\|30\|NC_021837\|CRISPRCasFinder,CRT	792098-792127	30	DQ003637	Listeria phage A500, complete genome	37232-37261	2	0.933
NC_021837_3	3.23\|792098\|30\|NC_021837\|CRISPRCasFinder,CRT	792098-792127	30	KJ094022	Listeria phage LP-030-3, complete genome	6787-6816	2	0.933
NC_021837_1	1.7\|11139\|36\|NC_021837\|PILER-CR,CRISPRCasFinder	11139-11174	36	NC_009812	Listeria phage B025, complete genome	5044-5079	3	0.917
NC_021837_3	3.11\|791306\|30\|NC_021837\|CRISPRCasFinder,CRT,PILER-CR	791306-791335	30	KJ094027	Listeria phage LP-083-1 contig 1, partial genome	14029-14058	3	0.9
NC_021837_3	3.11\|791306\|30\|NC_021837\|CRISPRCasFinder,CRT,PILER-CR	791306-791335	30	DQ003641	Listeria phage P35, complete genome	13752-13781	3	0.9
NC_021837_3	3.19\|791834\|30\|NC_021837\|CRISPRCasFinder,CRT,PILER-CR	791834-791863	30	JB137888	Sequence 7 from Patent WO2012159774	3951-3980	3	0.9
NC_021837_3	3.19\|791834\|30\|NC_021837\|CRISPRCasFinder,CRT,PILER-CR	791834-791863	30	JX442241	Listeria phage P70, complete genome	50802-50831	3	0.9
NC_021837_3	3.22\|792032\|30\|NC_021837\|CRISPRCasFinder,CRT,PILER-CR	792032-792061	30	NZ_CP011399	Listeria monocytogenes strain CFSAN008100 plasmid pCFSAN008100, complete sequence	64606-64635	4	0.867
NC_021837_3	3.22\|792032\|30\|NC_021837\|CRISPRCasFinder,CRT,PILER-CR	792032-792061	30	NC_021539	Listeria phage LP-030-2, complete genome	26551-26580	4	0.867
NC_021837_1	1.9\|10819\|36\|NC_021837\|CRT	10819-10854	36	JN700520	Staphylococcus phage StB12, complete genome	6832-6867	5	0.861
NC_021837_3	3.21\|791966\|30\|NC_021837\|CRISPRCasFinder,CRT,PILER-CR	791966-791995	30	MH299806	Listeria phage LP-KV022, complete genome	49486-49515	5	0.833
NC_021837_3	3.21\|791966\|30\|NC_021837\|CRISPRCasFinder,CRT,PILER-CR	791966-791995	30	MN114083	Listeria phage LP-013, complete genome	45007-45036	5	0.833
NC_021837_3	3.21\|791966\|30\|NC_021837\|CRISPRCasFinder,CRT,PILER-CR	791966-791995	30	NC_021785	Listeria phage LP-110, complete genome	7204-7233	5	0.833
NC_021837_3	3.21\|791966\|30\|NC_021837\|CRISPRCasFinder,CRT,PILER-CR	791966-791995	30	NC_021787	Listeria phage LP-037, complete genome	1670-1699	5	0.833
NC_021837_3	3.21\|791966\|30\|NC_021837\|CRISPRCasFinder,CRT,PILER-CR	791966-791995	30	MN904502	Listeria phage LP-018, complete genome	44461-44490	5	0.833
NC_021837_3	3.22\|792032\|30\|NC_021837\|CRISPRCasFinder,CRT,PILER-CR	792032-792061	30	AJ312240	Bacteriophage PSA complete genome	26274-26303	5	0.833
NC_021837_3	3.22\|792032\|30\|NC_021837\|CRISPRCasFinder,CRT,PILER-CR	792032-792061	30	MK448750	Streptococcus phage Javan393, complete genome	14096-14125	5	0.833
NC_021837_1	1.2\|10818\|37\|NC_021837\|PILER-CR,CRISPRCasFinder	10818-10854	37	JN700520	Staphylococcus phage StB12, complete genome	6832-6868	6	0.838
NC_021837_3	3.2\|790712\|30\|NC_021837\|CRISPRCasFinder,CRT	790712-790741	30	NC_001851	Borreliella burgdorferi B31 plasmid lp28-1, complete sequence	17531-17560	6	0.8
NC_021837_3	3.2\|790712\|30\|NC_021837\|CRISPRCasFinder,CRT	790712-790741	30	NZ_CP019923	Borreliella burgdorferi strain PAbe plasmid p_lp28-1, complete sequence	10597-10626	6	0.8
NC_021837_3	3.2\|790712\|30\|NC_021837\|CRISPRCasFinder,CRT	790712-790741	30	NZ_CP025846	Escherichia coli strain 720632 plasmid p720632_86, complete sequence	80172-80201	6	0.8
NC_021837_3	3.2\|790712\|30\|NC_021837\|CRISPRCasFinder,CRT	790712-790741	30	NZ_CP019762	Borreliella burgdorferi strain B31_NRZ isolate B31 plasmid p_lp28-1	8732-8761	6	0.8
NC_021837_3	3.2\|790712\|30\|NC_021837\|CRISPRCasFinder,CRT	790712-790741	30	NC_011419	Escherichia coli SE11 plasmid pSE11-1, complete sequence	25600-25629	6	0.8
NC_021837_3	3.2\|790712\|30\|NC_021837\|CRISPRCasFinder,CRT	790712-790741	30	NC_016904	Escherichia coli KO11FL plasmid pEKO1101, complete sequence	7092-7121	6	0.8
NC_021837_3	3.2\|790712\|30\|NC_021837\|CRISPRCasFinder,CRT	790712-790741	30	NC_017665	Escherichia coli W plasmid pRK1, complete sequence	83461-83490	6	0.8
NC_021837_3	3.10\|791240\|30\|NC_021837\|CRISPRCasFinder,CRT,PILER-CR	791240-791269	30	NC_007056	Staphylococcus phage EW, complete genome	21067-21096	6	0.8
NC_021837_3	3.10\|791240\|30\|NC_021837\|CRISPRCasFinder,CRT,PILER-CR	791240-791269	30	AY954959	Bacteriophage EW, complete genome	21067-21096	6	0.8
NC_021837_3	3.19\|791834\|30\|NC_021837\|CRISPRCasFinder,CRT,PILER-CR	791834-791863	30	CP025878	Escherichia coli strain 503458 plasmid p503458_84, complete sequence	24835-24864	6	0.8
NC_021837_3	3.19\|791834\|30\|NC_021837\|CRISPRCasFinder,CRT,PILER-CR	791834-791863	30	NZ_CP025855	Escherichia coli strain 510016 plasmid p510016_84, complete sequence	27119-27148	6	0.8
NC_021837_3	3.19\|791834\|30\|NC_021837\|CRISPRCasFinder,CRT,PILER-CR	791834-791863	30	CP025926	Escherichia coli strain 520873 plasmid p520873_84, complete sequence	73925-73954	6	0.8
NC_021837_3	3.19\|791834\|30\|NC_021837\|CRISPRCasFinder,CRT,PILER-CR	791834-791863	30	CP025889	Escherichia coli strain 503046 plasmid p503046_85, complete sequence	51647-51676	6	0.8
NC_021837_3	3.19\|791834\|30\|NC_021837\|CRISPRCasFinder,CRT,PILER-CR	791834-791863	30	HE962497	Streptococcus phage SP-QS1 complete genome	49933-49962	6	0.8
NC_021837_3	3.21\|791966\|30\|NC_021837\|CRISPRCasFinder,CRT,PILER-CR	791966-791995	30	NC_047872	Listeria phage LMTA-94, complete genome	135168-135197	6	0.8
NC_021837_3	3.21\|791966\|30\|NC_021837\|CRISPRCasFinder,CRT,PILER-CR	791966-791995	30	KJ591605	Listeria phage LMTA-57, complete genome	9067-9096	6	0.8
NC_021837_3	3.21\|791966\|30\|NC_021837\|CRISPRCasFinder,CRT,PILER-CR	791966-791995	30	MK792752	UNVERIFIED: Listera phage vB-LmoM-SH3-3, complete genome	3580-3609	6	0.8
NC_021837_3	3.21\|791966\|30\|NC_021837\|CRISPRCasFinder,CRT,PILER-CR	791966-791995	30	KJ535721	Listeria phage List-36, complete genome	131040-131069	6	0.8
NC_021837_3	3.21\|791966\|30\|NC_021837\|CRISPRCasFinder,CRT,PILER-CR	791966-791995	30	MN172529	Listeria phage LP-039, complete genome	131685-131714	6	0.8
NC_021837_3	3.21\|791966\|30\|NC_021837\|CRISPRCasFinder,CRT,PILER-CR	791966-791995	30	MT438761	Listeria virus P61, complete genome	9489-9518	6	0.8
NC_021837_3	3.21\|791966\|30\|NC_021837\|CRISPRCasFinder,CRT,PILER-CR	791966-791995	30	MT668624	Listeria phage LP-Mix_6.2, complete genome	134227-134256	6	0.8
NC_021837_3	3.21\|791966\|30\|NC_021837\|CRISPRCasFinder,CRT,PILER-CR	791966-791995	30	MT178766	Listeria virus P100plus, complete genome	99479-99508	6	0.8
NC_021837_3	3.21\|791966\|30\|NC_021837\|CRISPRCasFinder,CRT,PILER-CR	791966-791995	30	KJ668716	Listeria phage LMTA-34 hypothetical protein genes, complete cds	3116-3145	6	0.8
NC_021837_3	3.21\|791966\|30\|NC_021837\|CRISPRCasFinder,CRT,PILER-CR	791966-791995	30	DQ003638	Listeria phage A511, complete genome	132953-132982	6	0.8
NC_021837_3	3.21\|791966\|30\|NC_021837\|CRISPRCasFinder,CRT,PILER-CR	791966-791995	30	MT178767	Listeria virus P200, complete genome	99480-99509	6	0.8
NC_021837_3	3.21\|791966\|30\|NC_021837\|CRISPRCasFinder,CRT,PILER-CR	791966-791995	30	KJ094033	Listeria phage LP-048, complete genome	1113-1142	6	0.8
NC_021837_3	3.21\|791966\|30\|NC_021837\|CRISPRCasFinder,CRT,PILER-CR	791966-791995	30	NC_042048	Listeria phage LMTA-34, complete genome	12361-12390	6	0.8
NC_021837_3	3.21\|791966\|30\|NC_021837\|CRISPRCasFinder,CRT,PILER-CR	791966-791995	30	NC_041862	Listeria phage LP-064, complete genome	7041-7070	6	0.8
NC_021837_3	3.21\|791966\|30\|NC_021837\|CRISPRCasFinder,CRT,PILER-CR	791966-791995	30	JX126918	Listeria phage LP-125, complete genome	7041-7070	6	0.8
NC_021837_3	3.21\|791966\|30\|NC_021837\|CRISPRCasFinder,CRT,PILER-CR	791966-791995	30	NC_024360	Listeria phage LMSP-25, complete genome	12361-12390	6	0.8
NC_021837_3	3.21\|791966\|30\|NC_021837\|CRISPRCasFinder,CRT,PILER-CR	791966-791995	30	JQ797329	Listeria phage vB_LmoM_AG20, complete genome	131708-131737	6	0.8
NC_021837_3	3.22\|792032\|30\|NC_021837\|CRISPRCasFinder,CRT,PILER-CR	792032-792061	30	DQ003637	Listeria phage A500, complete genome	34063-34092	6	0.8
NC_021837_3	3.22\|792032\|30\|NC_021837\|CRISPRCasFinder,CRT,PILER-CR	792032-792061	30	KP399677	Listeria phage vB_LmoS_188, complete genome	33569-33598	6	0.8
NC_021837_3	3.22\|792032\|30\|NC_021837\|CRISPRCasFinder,CRT,PILER-CR	792032-792061	30	KJ094022	Listeria phage LP-030-3, complete genome	3092-3121	6	0.8
NC_021837_3	3.22\|792032\|30\|NC_021837\|CRISPRCasFinder,CRT,PILER-CR	792032-792061	30	KP399678	Listeria phage vB_LmoS_293, complete genome	35853-35882	6	0.8
NC_021837_3	3.2\|790712\|30\|NC_021837\|CRISPRCasFinder,CRT	790712-790741	30	NC_015909	Borreliella bissettii DN127 plasmid cp32-5, complete sequence	20865-20894	7	0.767
NC_021837_3	3.2\|790712\|30\|NC_021837\|CRISPRCasFinder,CRT	790712-790741	30	NZ_CP028880	Borreliella bavariensis PBi plasmid cp32-5, complete sequence	6543-6572	7	0.767
NC_021837_3	3.2\|790712\|30\|NC_021837\|CRISPRCasFinder,CRT	790712-790741	30	NZ_LN908215	Clostridium beijerinckii isolate C. beijerinckii DSM 6423 plasmid III	1850-1879	7	0.767
NC_021837_3	3.2\|790712\|30\|NC_021837\|CRISPRCasFinder,CRT	790712-790741	30	NZ_CP053952	Bacillus cereus strain FDAARGOS_798 plasmid unnamed1, complete sequence	407804-407833	7	0.767
NC_021837_3	3.2\|790712\|30\|NC_021837\|CRISPRCasFinder,CRT	790712-790741	30	NZ_CP053949	Bacillus cereus strain FDAARGOS_799 plasmid unnamed1, complete sequence	57862-57891	7	0.767
NC_021837_3	3.5\|790910\|30\|NC_021837\|CRISPRCasFinder,CRT	790910-790939	30	MK360916	Acinetobacter baumannii plasmid pAB18PR065-MCR-4.3, complete sequence	21215-21244	7	0.767
NC_021837_3	3.5\|790910\|30\|NC_021837\|CRISPRCasFinder,CRT	790910-790939	30	MF543359	Salmonella sp. plasmid pMCR_R3445, complete sequence	7161-7190	7	0.767
NC_021837_3	3.5\|790910\|30\|NC_021837\|CRISPRCasFinder,CRT	790910-790939	30	NZ_CP033872	Acinetobacter baumannii strain MRSN15313 plasmid pAb-MCR4.3, complete sequence	31115-31144	7	0.767
NC_021837_3	3.5\|790910\|30\|NC_021837\|CRISPRCasFinder,CRT	790910-790939	30	NZ_CP040891	Leclercia adecarboxylata strain Z96-1 plasmid pMCR-Z96-1, complete sequence	5108-5137	7	0.767
NC_021837_3	3.5\|790910\|30\|NC_021837\|CRISPRCasFinder,CRT	790910-790939	30	NZ_CP038261	Acinetobacter baumannii strain 39741 plasmid pEH_mcr4.3, complete sequence	7521-7550	7	0.767
NC_021837_3	3.5\|790910\|30\|NC_021837\|CRISPRCasFinder,CRT	790910-790939	30	NZ_MG800340	Salmonella enterica subsp. enterica serovar Typhimurium strain AB243 plasmid pMCR-4.2_AB243, complete sequence	4660-4689	7	0.767
NC_021837_3	3.5\|790910\|30\|NC_021837\|CRISPRCasFinder,CRT	790910-790939	30	NZ_MH061380	Enterobacter cloacae strain En_MCR4 plasmid pEn_MCR4, complete sequence	3949-3978	7	0.767
NC_021837_3	3.5\|790910\|30\|NC_021837\|CRISPRCasFinder,CRT	790910-790939	30	NZ_CP038265	Acinetobacter baumannii strain LEV1449/17Ec plasmid pEC_mcr4.3, complete sequence	14656-14685	7	0.767
NC_021837_3	3.5\|790910\|30\|NC_021837\|CRISPRCasFinder,CRT	790910-790939	30	NZ_MG800339	Escherichia coli strain R4287 plasmid pMCR-4.2_R4287, complete sequence	1560-1589	7	0.767
NC_021837_3	3.5\|790910\|30\|NC_021837\|CRISPRCasFinder,CRT	790910-790939	30	NZ_CP014570	Campylobacter fetus subsp. venerealis strain 01/165 plasmid mp2, complete sequence	8403-8432	7	0.767
NC_021837_3	3.22\|792032\|30\|NC_021837\|CRISPRCasFinder,CRT,PILER-CR	792032-792061	30	NC_027989	Campylobacter phage vB_CcoM-IBB_35 clone Contig1, complete genome	19442-19471	7	0.767
NC_021837_3	3.22\|792032\|30\|NC_021837\|CRISPRCasFinder,CRT,PILER-CR	792032-792061	30	KT898134	Aeromonas phage phiARM81mr, complete genome	20894-20923	7	0.767
NC_021837_3	3.22\|792032\|30\|NC_021837\|CRISPRCasFinder,CRT,PILER-CR	792032-792061	30	NC_042112	Campylobacter phage CP81, complete genome	57209-57238	7	0.767
NC_021837_3	3.22\|792032\|30\|NC_021837\|CRISPRCasFinder,CRT,PILER-CR	792032-792061	30	KF148616	Campylobacter phage CP8, complete genome	71096-71125	7	0.767
NC_021837_3	3.22\|792032\|30\|NC_021837\|CRISPRCasFinder,CRT,PILER-CR	792032-792061	30	NC_016562	Campylobacter phage CPX, complete genome	70863-70892	7	0.767
NC_021837_3	3.22\|792032\|30\|NC_021837\|CRISPRCasFinder,CRT,PILER-CR	792032-792061	30	JX569801	Campylobacter phage CP30A, complete genome	118091-118120	7	0.767
NC_021837_3	3.23\|792098\|30\|NC_021837\|CRISPRCasFinder,CRT	792098-792127	30	KT878766	Staphylococcus phage P1105, complete genome	32141-32170	7	0.767
NC_021837_3	3.23\|792098\|30\|NC_021837\|CRISPRCasFinder,CRT	792098-792127	30	NC_025460	Staphylococcus phage phiSa119, complete genome	7352-7381	7	0.767
NC_021837_1	1.9\|10819\|36\|NC_021837\|CRT	10819-10854	36	MW084976	Bacillus phage Kirov, complete genome	27565-27600	8	0.778
NC_021837_3	3.2\|790712\|30\|NC_021837\|CRISPRCasFinder,CRT	790712-790741	30	NZ_KT897276	Clostridium botulinum strain INGR16-02E1 plasmid pINGR16-02E1, complete sequence	26609-26638	8	0.733
NC_021837_3	3.2\|790712\|30\|NC_021837\|CRISPRCasFinder,CRT	790712-790741	30	NZ_KT897280	Clostridium botulinum strain FI1111E1 plasmid pFI1111E1, complete sequence	25522-25551	8	0.733
NC_021837_3	3.2\|790712\|30\|NC_021837\|CRISPRCasFinder,CRT	790712-790741	30	NZ_KT897275	Clostridium botulinum strain IFR 12/29 plasmid p12/29, complete sequence	26644-26673	8	0.733
NC_021837_3	3.2\|790712\|30\|NC_021837\|CRISPRCasFinder,CRT	790712-790741	30	NZ_KT897277	Clostridium botulinum strain ST0210E1 plasmid pST0210E1, complete sequence	26609-26638	8	0.733
NC_021837_3	3.2\|790712\|30\|NC_021837\|CRISPRCasFinder,CRT	790712-790741	30	NZ_KT897278	Clostridium botulinum strain FWSKR40E1 plasmid pFWSKR40E1, complete sequence	25522-25551	8	0.733
NC_021837_3	3.2\|790712\|30\|NC_021837\|CRISPRCasFinder,CRT	790712-790741	30	NZ_KT897279	Clostridium botulinum strain SWKR38E2 plasmid pSWKR38E2, complete sequence	25522-25551	8	0.733
NC_021837_3	3.2\|790712\|30\|NC_021837\|CRISPRCasFinder,CRT	790712-790741	30	NZ_CP031409	Borreliella burgdorferi strain MM1 plasmid plsm_lp28-8, complete sequence	15918-15947	8	0.733
NC_021837_3	3.2\|790712\|30\|NC_021837\|CRISPRCasFinder,CRT	790712-790741	30	NZ_CP013278	Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-3-235K, complete sequence	189054-189083	8	0.733
NC_021837_3	3.2\|790712\|30\|NC_021837\|CRISPRCasFinder,CRT	790712-790741	30	NC_018509	Bacillus thuringiensis HD-789 plasmid pBTHD789-2, complete sequence	182938-182967	8	0.733
NC_021837_3	3.2\|790712\|30\|NC_021837\|CRISPRCasFinder,CRT	790712-790741	30	NZ_CP051859	Bacillus thuringiensis serovar israelensis strain BGSC 4Q7rifR plasmid pBtic235, complete sequence	60157-60186	8	0.733
NC_021837_3	3.2\|790712\|30\|NC_021837\|CRISPRCasFinder,CRT	790712-790741	30	NZ_CP009347	Bacillus thuringiensis HD1002 plasmid 3, complete sequence	98913-98942	8	0.733
NC_021837_3	3.2\|790712\|30\|NC_021837\|CRISPRCasFinder,CRT	790712-790741	30	NZ_CP045025	Bacillus thuringiensis strain JW-1 plasmid p3, complete sequence	189054-189083	8	0.733
NC_021837_3	3.2\|790712\|30\|NC_021837\|CRISPRCasFinder,CRT	790712-790741	30	NZ_CP016590	Bacillus thuringiensis strain KNU-07 plasmid pBTKNU07-02, complete sequence	47359-47388	8	0.733
NC_021837_3	3.2\|790712\|30\|NC_021837\|CRISPRCasFinder,CRT	790712-790741	30	MT074137	Bacteroides phage DAC16, complete genome	65470-65499	8	0.733
NC_021837_3	3.2\|790712\|30\|NC_021837\|CRISPRCasFinder,CRT	790712-790741	30	MT074142	Bacteroides phage DAC23, complete genome	66591-66620	8	0.733
NC_021837_3	3.2\|790712\|30\|NC_021837\|CRISPRCasFinder,CRT	790712-790741	30	MT074141	Bacteroides phage DAC22, complete genome	69758-69787	8	0.733
NC_021837_3	3.2\|790712\|30\|NC_021837\|CRISPRCasFinder,CRT	790712-790741	30	MT074139	Bacteroides phage DAC19, complete genome	69527-69556	8	0.733
NC_021837_3	3.2\|790712\|30\|NC_021837\|CRISPRCasFinder,CRT	790712-790741	30	MN693433	Marine virus AFVG_25M397, complete genome	8467-8496	8	0.733
NC_021837_3	3.2\|790712\|30\|NC_021837\|CRISPRCasFinder,CRT	790712-790741	30	MT074140	Bacteroides phage DAC20, complete genome	69527-69556	8	0.733
NC_021837_3	3.2\|790712\|30\|NC_021837\|CRISPRCasFinder,CRT	790712-790741	30	AP022644	Bacillus wiedmannii PL1 plasmid pBwiPL1-1 DNA, complete sequence	332734-332763	8	0.733
NC_021837_3	3.2\|790712\|30\|NC_021837\|CRISPRCasFinder,CRT	790712-790741	30	NZ_CP012100	Bacillus thuringiensis strain HS18-1 plasmid pHS18-1, complete sequence	223748-223777	8	0.733
NC_021837_3	3.2\|790712\|30\|NC_021837\|CRISPRCasFinder,CRT	790712-790741	30	NZ_CP053971	Bacillus thuringiensis strain FDAARGOS_796 plasmid unnamed3, complete sequence	121817-121846	8	0.733
NC_021837_3	3.2\|790712\|30\|NC_021837\|CRISPRCasFinder,CRT	790712-790741	30	NZ_CP039724	Bacillus thuringiensis strain BT-59 plasmid p3, complete sequence	179676-179705	8	0.733
NC_021837_3	3.2\|790712\|30\|NC_021837\|CRISPRCasFinder,CRT	790712-790741	30	NZ_CP030336	Escherichia coli strain AR_451 plasmid unnamed4	5272-5301	8	0.733
NC_021837_3	3.2\|790712\|30\|NC_021837\|CRISPRCasFinder,CRT	790712-790741	30	NZ_CP018741	Bacillus cereus strain FORC_047 plasmid pFORC47_1, complete sequence	55484-55513	8	0.733
NC_021837_3	3.2\|790712\|30\|NC_021837\|CRISPRCasFinder,CRT	790712-790741	30	MH511048	Podoviridae sp. isolate ctbh1, complete genome	42920-42949	8	0.733
NC_021837_3	3.5\|790910\|30\|NC_021837\|CRISPRCasFinder,CRT	790910-790939	30	NZ_CP013139	Pseudoalteromonas sp. Bsw20308 plasmid pPBSW1, complete sequence	584700-584729	8	0.733
NC_021837_3	3.5\|790910\|30\|NC_021837\|CRISPRCasFinder,CRT	790910-790939	30	MN693105	Marine virus AFVG_25M79, complete genome	5197-5226	8	0.733
NC_021837_3	3.5\|790910\|30\|NC_021837\|CRISPRCasFinder,CRT	790910-790939	30	MN693550	Marine virus AFVG_25M93, complete genome	31163-31192	8	0.733
NC_021837_3	3.5\|790910\|30\|NC_021837\|CRISPRCasFinder,CRT	790910-790939	30	MN693245	Marine virus AFVG_25M69, complete genome	30975-31004	8	0.733
NC_021837_3	3.10\|791240\|30\|NC_021837\|CRISPRCasFinder,CRT,PILER-CR	791240-791269	30	NZ_LR214939	Mycoplasma salivarium strain NCTC10113 plasmid 2	244510-244539	8	0.733
NC_021837_3	3.10\|791240\|30\|NC_021837\|CRISPRCasFinder,CRT,PILER-CR	791240-791269	30	NZ_CP034685	Bacillus sp. BD59S plasmid pBTBD59S2, complete sequence	136145-136174	8	0.733
NC_021837_3	3.10\|791240\|30\|NC_021837\|CRISPRCasFinder,CRT,PILER-CR	791240-791269	30	NZ_CP016589	Bacillus thuringiensis strain KNU-07 plasmid pBTKNU07-01, complete sequence	472828-472857	8	0.733
NC_021837_3	3.10\|791240\|30\|NC_021837\|CRISPRCasFinder,CRT,PILER-CR	791240-791269	30	MN693930	Marine virus AFVG_250M489, complete genome	21579-21608	8	0.733
NC_021837_3	3.11\|791306\|30\|NC_021837\|CRISPRCasFinder,CRT,PILER-CR	791306-791335	30	NZ_CP040346	Bacillus albus strain DLOU-Yingkou plasmid unnamed2, complete sequence	31108-31137	8	0.733
NC_021837_3	3.13\|791438\|30\|NC_021837\|CRISPRCasFinder,CRT,PILER-CR	791438-791467	30	NZ_CP020811	Mycobacterium dioxanotrophicus strain PH-06 plasmid unnamed2, complete sequence	70030-70059	8	0.733
NC_021837_3	3.21\|791966\|30\|NC_021837\|CRISPRCasFinder,CRT,PILER-CR	791966-791995	30	MK552327	Pseudomonas phage Psa21, complete genome	253430-253459	8	0.733
NC_021837_3	3.22\|792032\|30\|NC_021837\|CRISPRCasFinder,CRT,PILER-CR	792032-792061	30	NZ_CP050185	Bacillus thuringiensis strain HER1410 plasmid pLUSID2, complete sequence	94341-94370	8	0.733
NC_021837_3	3.22\|792032\|30\|NC_021837\|CRISPRCasFinder,CRT,PILER-CR	792032-792061	30	NC_021789	Cellulophaga phage phi19:3, complete genome	23831-23860	8	0.733
NC_021837_3	3.22\|792032\|30\|NC_021837\|CRISPRCasFinder,CRT,PILER-CR	792032-792061	30	NZ_CP037748	Campylobacter helveticus strain 2013D-9613 plasmid unnamed2, complete sequence	10327-10356	8	0.733
NC_021837_3	3.22\|792032\|30\|NC_021837\|CRISPRCasFinder,CRT,PILER-CR	792032-792061	30	NZ_CP020480	Campylobacter helveticus strain ATCC 51209 plasmid pHELV-2, complete sequence	7615-7644	8	0.733
NC_021837_3	3.22\|792032\|30\|NC_021837\|CRISPRCasFinder,CRT,PILER-CR	792032-792061	30	MK449012	Streptococcus phage Javan94, complete genome	10376-10405	8	0.733
NC_021837_3	3.22\|792032\|30\|NC_021837\|CRISPRCasFinder,CRT,PILER-CR	792032-792061	30	KF751797	Campylobacter phage CJIE4-5, complete genome	8480-8509	8	0.733
NC_021837_3	3.22\|792032\|30\|NC_021837\|CRISPRCasFinder,CRT,PILER-CR	792032-792061	30	KF751794	Campylobacter phage CJIE4-2, complete genome	6590-6619	8	0.733
NC_021837_3	3.22\|792032\|30\|NC_021837\|CRISPRCasFinder,CRT,PILER-CR	792032-792061	30	KF751795	Campylobacter phage CJIE4-3, complete genome	6557-6586	8	0.733
NC_021837_3	3.22\|792032\|30\|NC_021837\|CRISPRCasFinder,CRT,PILER-CR	792032-792061	30	KF751796	Campylobacter phage CJIE4-4, complete genome	6595-6624	8	0.733
NC_021837_3	3.22\|792032\|30\|NC_021837\|CRISPRCasFinder,CRT,PILER-CR	792032-792061	30	MK448673	Streptococcus phage Javan119, complete genome	12281-12310	8	0.733
NC_021837_3	3.22\|792032\|30\|NC_021837\|CRISPRCasFinder,CRT,PILER-CR	792032-792061	30	KF751793	Campylobacter phage CJIE4-1, complete genome	8033-8062	8	0.733
NC_021837_3	3.23\|792098\|30\|NC_021837\|CRISPRCasFinder,CRT	792098-792127	30	JN638751	Bacillus phage G, complete genome	221970-221999	8	0.733
NC_021837_1	1.2\|10818\|37\|NC_021837\|PILER-CR,CRISPRCasFinder	10818-10854	37	MW084976	Bacillus phage Kirov, complete genome	27565-27601	9	0.757
NC_021837_3	3.2\|790712\|30\|NC_021837\|CRISPRCasFinder,CRT	790712-790741	30	NZ_CP014419	Staphylococcus aureus strain USA300-SUR15 plasmid pUSA08-1-SUR15, complete sequence	29351-29380	9	0.7
NC_021837_3	3.2\|790712\|30\|NC_021837\|CRISPRCasFinder,CRT	790712-790741	30	NZ_CP021839	Anoxybacillus flavithermus strain 52-1A plasmid unnamed, complete sequence	15942-15971	9	0.7
NC_021837_3	3.3\|790778\|30\|NC_021837\|CRISPRCasFinder,CRT	790778-790807	30	MN445183	Salmonella phage vB_SalM_SA002, complete genome	210167-210196	9	0.7
NC_021837_3	3.5\|790910\|30\|NC_021837\|CRISPRCasFinder,CRT	790910-790939	30	MN693208	Marine virus AFVG_25M383, complete genome	5890-5919	9	0.7
NC_021837_3	3.5\|790910\|30\|NC_021837\|CRISPRCasFinder,CRT	790910-790939	30	MN693097	Marine virus AFVG_25M78, complete genome	5212-5241	9	0.7
NC_021837_3	3.5\|790910\|30\|NC_021837\|CRISPRCasFinder,CRT	790910-790939	30	MN693515	Marine virus AFVG_25M70, complete genome	31344-31373	9	0.7
NC_021837_3	3.5\|790910\|30\|NC_021837\|CRISPRCasFinder,CRT	790910-790939	30	MN693286	Marine virus AFVG_25M92, complete genome	31233-31262	9	0.7
NC_021837_3	3.5\|790910\|30\|NC_021837\|CRISPRCasFinder,CRT	790910-790939	30	MN693549	Marine virus AFVG_25M89, complete genome	31266-31295	9	0.7
NC_021837_3	3.8\|791108\|30\|NC_021837\|CRISPRCasFinder,CRT,PILER-CR	791108-791137	30	MT952853	Arthrobacter phage Orcanus, complete genome	5749-5778	9	0.7
NC_021837_3	3.10\|791240\|30\|NC_021837\|CRISPRCasFinder,CRT,PILER-CR	791240-791269	30	NZ_CP053657	Bacillus cereus strain CTMA_1571 plasmid p.1, complete sequence	227089-227118	9	0.7
NC_021837_3	3.11\|791306\|30\|NC_021837\|CRISPRCasFinder,CRT,PILER-CR	791306-791335	30	AP014362	Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S41-C102, * SEQUENCING IN PROGRESS *	1589-1618	9	0.7
NC_021837_3	3.19\|791834\|30\|NC_021837\|CRISPRCasFinder,CRT,PILER-CR	791834-791863	30	NC_017296	Clostridium acetobutylicum EA 2018 plasmid pEA2018, complete sequence	181805-181834	9	0.7
NC_021837_3	3.19\|791834\|30\|NC_021837\|CRISPRCasFinder,CRT,PILER-CR	791834-791863	30	NC_015686	Clostridium acetobutylicum DSM 1731 plasmid pSMBa, complete sequence	181805-181834	9	0.7
NC_021837_3	3.19\|791834\|30\|NC_021837\|CRISPRCasFinder,CRT,PILER-CR	791834-791863	30	NC_001988	Clostridium acetobutylicum ATCC 824 plasmid pSOL1, complete sequence	181805-181834	9	0.7
NC_021837_3	3.22\|792032\|30\|NC_021837\|CRISPRCasFinder,CRT,PILER-CR	792032-792061	30	MH107028	Campylobacter phage CP39, partial genome	13387-13416	9	0.7
NC_021837_1	1.8\|10755\|35\|NC_021837\|CRT	10755-10789	35	NZ_CP029455	Bacillus cereus strain FORC087 plasmid pFORC087.1, complete sequence	130632-130666	11	0.686
NC_021837_1	1.8\|10755\|35\|NC_021837\|CRT	10755-10789	35	NZ_CP015592	Bacillus cereus strain AR156 plasmid pAR460, complete sequence	17622-17656	11	0.686
NC_021837_1	1.8\|10755\|35\|NC_021837\|CRT	10755-10789	35	NZ_CP009368	Bacillus cereus strain FM1 plasmid unnamed, complete sequence	31860-31894	11	0.686
NC_021837_1	1.8\|10755\|35\|NC_021837\|CRT	10755-10789	35	NZ_CP009336	Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence	338888-338922	11	0.686

1. spacer 1.8|10755|35|NC_021837|CRT matches to DQ003642 (Listeria phage A006, complete genome) position: , mismatch: 0, identity: 1.0

gaaattgtaaaatctatatccgttgattcaacaaa	CRISPR spacer
gaaattgtaaaatctatatccgttgattcaacaaa	Protospacer
***********************************

2. spacer 1.9|10819|36|NC_021837|CRT matches to MT500540 (Listeria phage LP-HM00113468, complete genome) position: , mismatch: 0, identity: 1.0

ttaatttgatagtcataatttatttcctcctatttt	CRISPR spacer
ttaatttgatagtcataatttatttcctcctatttt	Protospacer
************************************

3. spacer 1.9|10819|36|NC_021837|CRT matches to NC_009812 (Listeria phage B025, complete genome) position: , mismatch: 0, identity: 1.0

ttaatttgatagtcataatttatttcctcctatttt	CRISPR spacer
ttaatttgatagtcataatttatttcctcctatttt	Protospacer
************************************

4. spacer 1.9|10819|36|NC_021837|CRT matches to KJ094023 (Listeria phage LP-101, complete genome) position: , mismatch: 0, identity: 1.0

ttaatttgatagtcataatttatttcctcctatttt	CRISPR spacer
ttaatttgatagtcataatttatttcctcctatttt	Protospacer
************************************

5. spacer 1.14|11140|35|NC_021837|CRT matches to NZ_LR134403 (Listeria monocytogenes strain NCTC7974 plasmid 6, complete sequence) position: , mismatch: 0, identity: 1.0

gccatttacaatcacccttccggagtttgatctgt	CRISPR spacer
gccatttacaatcacccttccggagtttgatctgt	Protospacer
***********************************

6. spacer 1.14|11140|35|NC_021837|CRT matches to MT500540 (Listeria phage LP-HM00113468, complete genome) position: , mismatch: 0, identity: 1.0

gccatttacaatcacccttccggagtttgatctgt	CRISPR spacer
gccatttacaatcacccttccggagtttgatctgt	Protospacer
***********************************

7. spacer 1.14|11140|35|NC_021837|CRT matches to KJ094023 (Listeria phage LP-101, complete genome) position: , mismatch: 0, identity: 1.0

gccatttacaatcacccttccggagtttgatctgt	CRISPR spacer
gccatttacaatcacccttccggagtttgatctgt	Protospacer
***********************************

8. spacer 3.3|790778|30|NC_021837|CRISPRCasFinder,CRT matches to KJ094027 (Listeria phage LP-083-1 contig 1, partial genome) position: , mismatch: 0, identity: 1.0

atgcgtttggtacagtaccttgaacaacgt	CRISPR spacer
atgcgtttggtacagtaccttgaacaacgt	Protospacer
******************************

9. spacer 3.3|790778|30|NC_021837|CRISPRCasFinder,CRT matches to DQ003641 (Listeria phage P35, complete genome) position: , mismatch: 0, identity: 1.0

atgcgtttggtacagtaccttgaacaacgt	CRISPR spacer
atgcgtttggtacagtaccttgaacaacgt	Protospacer
******************************

10. spacer 1.1|10754|36|NC_021837|PILER-CR,CRISPRCasFinder matches to DQ003642 (Listeria phage A006, complete genome) position: , mismatch: 1, identity: 0.972

cgaaattgtaaaatctatatccgttgattcaacaaa	CRISPR spacer
agaaattgtaaaatctatatccgttgattcaacaaa	Protospacer
 ***********************************

11. spacer 1.2|10818|37|NC_021837|PILER-CR,CRISPRCasFinder matches to NC_009812 (Listeria phage B025, complete genome) position: , mismatch: 1, identity: 0.973

cttaatttgatagtcataatttatttcctcctatttt	CRISPR spacer
tttaatttgatagtcataatttatttcctcctatttt	Protospacer
.************************************

12. spacer 1.2|10818|37|NC_021837|PILER-CR,CRISPRCasFinder matches to KJ094023 (Listeria phage LP-101, complete genome) position: , mismatch: 1, identity: 0.973

cttaatttgatagtcataatttatttcctcctatttt	CRISPR spacer
tttaatttgatagtcataatttatttcctcctatttt	Protospacer
.************************************

13. spacer 1.2|10818|37|NC_021837|PILER-CR,CRISPRCasFinder matches to MT500540 (Listeria phage LP-HM00113468, complete genome) position: , mismatch: 1, identity: 0.973

cttaatttgatagtcataatttatttcctcctatttt	CRISPR spacer
tttaatttgatagtcataatttatttcctcctatttt	Protospacer
.************************************

14. spacer 1.3|10883|36|NC_021837|PILER-CR,CRISPRCasFinder matches to NC_021539 (Listeria phage LP-030-2, complete genome) position: , mismatch: 1, identity: 0.972

tatagaaaggagttgatacagtgaaggatgttttag	CRISPR spacer
tatagaaaggagttgagacagtgaaggatgttttag	Protospacer
**************** *******************

15. spacer 1.3|10883|36|NC_021837|PILER-CR,CRISPRCasFinder matches to KJ094023 (Listeria phage LP-101, complete genome) position: , mismatch: 1, identity: 0.972

tatagaaaggagttgatacagtgaaggatgttttag	CRISPR spacer
tatagaaaggagttgagacagtgaaggatgttttag	Protospacer
**************** *******************

16. spacer 1.5|11010|36|NC_021837|PILER-CR,CRISPRCasFinder matches to MH341453 (Listeria phage PSU-VKH-LP041, complete genome) position: , mismatch: 1, identity: 0.972

cttgtaacccatcgctgtccctttgacaaaaatcgc	CRISPR spacer
cttgtaacccatcgctgttcctttgacaaaaatcgc	Protospacer
******************.*****************

17. spacer 1.7|11139|36|NC_021837|PILER-CR,CRISPRCasFinder matches to NZ_LR134403 (Listeria monocytogenes strain NCTC7974 plasmid 6, complete sequence) position: , mismatch: 1, identity: 0.972

cgccatttacaatcacccttccggagtttgatctgt	CRISPR spacer
agccatttacaatcacccttccggagtttgatctgt	Protospacer
 ***********************************

18. spacer 1.7|11139|36|NC_021837|PILER-CR,CRISPRCasFinder matches to MT500540 (Listeria phage LP-HM00113468, complete genome) position: , mismatch: 1, identity: 0.972

cgccatttacaatcacccttccggagtttgatctgt	CRISPR spacer
agccatttacaatcacccttccggagtttgatctgt	Protospacer
 ***********************************

19. spacer 1.7|11139|36|NC_021837|PILER-CR,CRISPRCasFinder matches to KJ094023 (Listeria phage LP-101, complete genome) position: , mismatch: 1, identity: 0.972

cgccatttacaatcacccttccggagtttgatctgt	CRISPR spacer
agccatttacaatcacccttccggagtttgatctgt	Protospacer
 ***********************************

20. spacer 1.9|10819|36|NC_021837|CRT matches to NZ_LR134403 (Listeria monocytogenes strain NCTC7974 plasmid 6, complete sequence) position: , mismatch: 1, identity: 0.972

ttaatttgatagtcataatttatttcctcctatttt	CRISPR spacer
ttaatttgatagtcataatctatttcctcctatttt	Protospacer
*******************.****************

21. spacer 1.10|10884|35|NC_021837|CRT matches to NC_021539 (Listeria phage LP-030-2, complete genome) position: , mismatch: 1, identity: 0.971

atagaaaggagttgatacagtgaaggatgttttag	CRISPR spacer
atagaaaggagttgagacagtgaaggatgttttag	Protospacer
*************** *******************

22. spacer 1.10|10884|35|NC_021837|CRT matches to KJ094023 (Listeria phage LP-101, complete genome) position: , mismatch: 1, identity: 0.971

atagaaaggagttgatacagtgaaggatgttttag	CRISPR spacer
atagaaaggagttgagacagtgaaggatgttttag	Protospacer
*************** *******************

23. spacer 1.12|11011|35|NC_021837|CRT matches to MH341453 (Listeria phage PSU-VKH-LP041, complete genome) position: , mismatch: 1, identity: 0.971

ttgtaacccatcgctgtccctttgacaaaaatcgc	CRISPR spacer
ttgtaacccatcgctgttcctttgacaaaaatcgc	Protospacer
*****************.*****************

24. spacer 3.12|791372|30|NC_021837|CRISPRCasFinder,CRT,PILER-CR matches to MH341452 (Listeria phage PSU-VKH-LP040, complete genome) position: , mismatch: 1, identity: 0.967

cgtactcgttcgtctcgttaatgacgtacg	CRISPR spacer
cgtactcgttcgtctcgttaatgacgaacg	Protospacer
************************** ***

25. spacer 3.15|791570|30|NC_021837|CRISPRCasFinder,CRT,PILER-CR matches to NC_009813 (Listeria phage B054, complete genome) position: , mismatch: 1, identity: 0.967

cacgagtatccacacaatcactatccaaat	CRISPR spacer
cacgagtatccacacaatcgctatccaaat	Protospacer
*******************.**********

26. spacer 1.2|10818|37|NC_021837|PILER-CR,CRISPRCasFinder matches to NZ_LR134403 (Listeria monocytogenes strain NCTC7974 plasmid 6, complete sequence) position: , mismatch: 2, identity: 0.946

cttaatttgatagtcataatttatttcctcctatttt	CRISPR spacer
tttaatttgatagtcataatctatttcctcctatttt	Protospacer
.*******************.****************

27. spacer 1.3|10883|36|NC_021837|PILER-CR,CRISPRCasFinder matches to NC_009812 (Listeria phage B025, complete genome) position: , mismatch: 2, identity: 0.944

tatagaaaggagttgatacagtgaaggatgttttag	CRISPR spacer
tatagaaaggagttgagatagtgaaggatgttttag	Protospacer
**************** *.*****************

28. spacer 1.5|11010|36|NC_021837|PILER-CR,CRISPRCasFinder matches to NC_009813 (Listeria phage B054, complete genome) position: , mismatch: 2, identity: 0.944

cttgtaacccatcgctgtccctttgacaaaaatcgc	CRISPR spacer
cttgtaacccatcgccgttcctttgacaaaaatcgc	Protospacer
***************.**.*****************

29. spacer 1.10|10884|35|NC_021837|CRT matches to NC_009812 (Listeria phage B025, complete genome) position: , mismatch: 2, identity: 0.943

atagaaaggagttgatacagtgaaggatgttttag	CRISPR spacer
atagaaaggagttgagatagtgaaggatgttttag	Protospacer
*************** *.*****************

30. spacer 1.12|11011|35|NC_021837|CRT matches to NC_009813 (Listeria phage B054, complete genome) position: , mismatch: 2, identity: 0.943

ttgtaacccatcgctgtccctttgacaaaaatcgc	CRISPR spacer
ttgtaacccatcgccgttcctttgacaaaaatcgc	Protospacer
**************.**.*****************

31. spacer 1.14|11140|35|NC_021837|CRT matches to NC_009812 (Listeria phage B025, complete genome) position: , mismatch: 2, identity: 0.943

gccatttacaatcacccttccggagtttgatctgt	CRISPR spacer
gccatttacaatcacccttccggagtttgttctgc	Protospacer
***************************** ****.

32. spacer 3.9|791174|30|NC_021837|CRISPRCasFinder,CRT,PILER-CR matches to KJ094028 (Listeria phage LP-083-1 contig 2, partial genome) position: , mismatch: 2, identity: 0.933

atacgaattctttatcaagggtcagaacgg	CRISPR spacer
atacgaattctttatcaagggtcaggatgg	Protospacer
*************************.*.**

33. spacer 3.9|791174|30|NC_021837|CRISPRCasFinder,CRT,PILER-CR matches to DQ003641 (Listeria phage P35, complete genome) position: , mismatch: 2, identity: 0.933

atacgaattctttatcaagggtcagaacgg	CRISPR spacer
atacgaattctttatcaagggtcaggatgg	Protospacer
*************************.*.**

34. spacer 3.15|791570|30|NC_021837|CRISPRCasFinder,CRT,PILER-CR matches to MH341453 (Listeria phage PSU-VKH-LP041, complete genome) position: , mismatch: 2, identity: 0.933

cacgagtatccacacaatcactatccaaat	CRISPR spacer
cgcgagtatccacacaatcgctatccaaat	Protospacer
*.*****************.**********

35. spacer 3.16|791636|30|NC_021837|CRISPRCasFinder,CRT,PILER-CR matches to NC_009813 (Listeria phage B054, complete genome) position: , mismatch: 2, identity: 0.933

ttcttttcctttgataacagctctataagt	CRISPR spacer
ttcttttcctttgataaccgccctataagt	Protospacer
****************** **.********

36. spacer 3.22|792032|30|NC_021837|CRISPRCasFinder,CRT,PILER-CR matches to MH341451 (Listeria phage PSU-VKH-LP019, complete genome) position: , mismatch: 2, identity: 0.933

acaataagatttttgaaggggatataggct	CRISPR spacer
gcaagaagatttttgaaggggatataggct	Protospacer
.*** *************************

37. spacer 3.23|792098|30|NC_021837|CRISPRCasFinder,CRT matches to DQ003637 (Listeria phage A500, complete genome) position: , mismatch: 2, identity: 0.933

tgtctgaatgtagttgatatctttaacttg	CRISPR spacer
tgtctgaatgtagttaatatcttcaacttg	Protospacer
***************.*******.******

38. spacer 3.23|792098|30|NC_021837|CRISPRCasFinder,CRT matches to KJ094022 (Listeria phage LP-030-3, complete genome) position: , mismatch: 2, identity: 0.933

tgtctgaatgtagttgatatctttaacttg	CRISPR spacer
tgtctgaatgtagttaatatcttcaacttg	Protospacer
***************.*******.******

39. spacer 1.7|11139|36|NC_021837|PILER-CR,CRISPRCasFinder matches to NC_009812 (Listeria phage B025, complete genome) position: , mismatch: 3, identity: 0.917

cgccatttacaatcacccttccggagtttgatctgt	CRISPR spacer
agccatttacaatcacccttccggagtttgttctgc	Protospacer
 ***************************** ****.

40. spacer 3.11|791306|30|NC_021837|CRISPRCasFinder,CRT,PILER-CR matches to KJ094027 (Listeria phage LP-083-1 contig 1, partial genome) position: , mismatch: 3, identity: 0.9

cactacattcaaatataaaccttcacaagc	CRISPR spacer
cactacattcaaatataaaccttcgcagac	Protospacer
************************.**..*

41. spacer 3.11|791306|30|NC_021837|CRISPRCasFinder,CRT,PILER-CR matches to DQ003641 (Listeria phage P35, complete genome) position: , mismatch: 3, identity: 0.9

cactacattcaaatataaaccttcacaagc	CRISPR spacer
cactacattcaaatataaaccttcgcagac	Protospacer
************************.**..*

42. spacer 3.19|791834|30|NC_021837|CRISPRCasFinder,CRT,PILER-CR matches to JB137888 (Sequence 7 from Patent WO2012159774) position: , mismatch: 3, identity: 0.9

tttagtttatcagtttatcacaatggaaga	CRISPR spacer
cttagtttatcaattcatcacaatggaaga	Protospacer
.***********.**.**************

43. spacer 3.19|791834|30|NC_021837|CRISPRCasFinder,CRT,PILER-CR matches to JX442241 (Listeria phage P70, complete genome) position: , mismatch: 3, identity: 0.9

tttagtttatcagtttatcacaatggaaga	CRISPR spacer
cttagtttatcaattcatcacaatggaaga	Protospacer
.***********.**.**************

44. spacer 3.22|792032|30|NC_021837|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP011399 (Listeria monocytogenes strain CFSAN008100 plasmid pCFSAN008100, complete sequence) position: , mismatch: 4, identity: 0.867

acaataagatttttgaaggggatataggct	CRISPR spacer
gcaagaagatttttgaaggggatatagtcg	Protospacer
.*** ********************** *

45. spacer 3.22|792032|30|NC_021837|CRISPRCasFinder,CRT,PILER-CR matches to NC_021539 (Listeria phage LP-030-2, complete genome) position: , mismatch: 4, identity: 0.867

acaataagatttttgaaggggatataggct	CRISPR spacer
gcaagaagatttttgaaggggatatagtcg	Protospacer
.*** ********************** *

46. spacer 1.9|10819|36|NC_021837|CRT matches to JN700520 (Staphylococcus phage StB12, complete genome) position: , mismatch: 5, identity: 0.861

ttaatttga-tagtcataatttatttcctcctatttt	CRISPR spacer
-tagtttgattagtcattatttacttcctcctattta	Protospacer
 **.***** ******* *****.************

47. spacer 3.21|791966|30|NC_021837|CRISPRCasFinder,CRT,PILER-CR matches to MH299806 (Listeria phage LP-KV022, complete genome) position: , mismatch: 5, identity: 0.833

ttggtttgatgaagaactattcagttgctt	CRISPR spacer
gtggtttgatgaagacttattcagttattt	Protospacer
 ************** .*********..**

48. spacer 3.21|791966|30|NC_021837|CRISPRCasFinder,CRT,PILER-CR matches to MN114083 (Listeria phage LP-013, complete genome) position: , mismatch: 5, identity: 0.833

ttggtttgatgaagaactattcagttgctt	CRISPR spacer
gtggtttgatgaagacttattcagttattt	Protospacer
 ************** .*********..**

49. spacer 3.21|791966|30|NC_021837|CRISPRCasFinder,CRT,PILER-CR matches to NC_021785 (Listeria phage LP-110, complete genome) position: , mismatch: 5, identity: 0.833

ttggtttgatgaagaactattcagttgctt	CRISPR spacer
gtggtttgatgaagacttattcagttattt	Protospacer
 ************** .*********..**

50. spacer 3.21|791966|30|NC_021837|CRISPRCasFinder,CRT,PILER-CR matches to NC_021787 (Listeria phage LP-037, complete genome) position: , mismatch: 5, identity: 0.833

ttggtttgatgaagaactattcagttgctt	CRISPR spacer
gtggtttgatgaagacttattcagttattt	Protospacer
 ************** .*********..**

51. spacer 3.21|791966|30|NC_021837|CRISPRCasFinder,CRT,PILER-CR matches to MN904502 (Listeria phage LP-018, complete genome) position: , mismatch: 5, identity: 0.833

ttggtttgatgaagaactattcagttgctt	CRISPR spacer
gtggtttgatgaagacttattcagttattt	Protospacer
 ************** .*********..**

52. spacer 3.22|792032|30|NC_021837|CRISPRCasFinder,CRT,PILER-CR matches to AJ312240 (Bacteriophage PSA complete genome) position: , mismatch: 5, identity: 0.833

acaataagatttttgaaggggatataggct	CRISPR spacer
gcaagaagatttttgaaggggatatagtag	Protospacer
.*** **********************

53. spacer 3.22|792032|30|NC_021837|CRISPRCasFinder,CRT,PILER-CR matches to MK448750 (Streptococcus phage Javan393, complete genome) position: , mismatch: 5, identity: 0.833

acaataagatttttgaaggggatataggct	CRISPR spacer
agaatgagatttttgaaggtgatatagtca	Protospacer
* ***.************* ******* *

54. spacer 1.2|10818|37|NC_021837|PILER-CR,CRISPRCasFinder matches to JN700520 (Staphylococcus phage StB12, complete genome) position: , mismatch: 6, identity: 0.838

cttaatttga-tagtcataatttatttcctcctatttt	CRISPR spacer
-atagtttgattagtcattatttacttcctcctattta	Protospacer
  **.***** ******* *****.************

55. spacer 3.2|790712|30|NC_021837|CRISPRCasFinder,CRT matches to NC_001851 (Borreliella burgdorferi B31 plasmid lp28-1, complete sequence) position: , mismatch: 6, identity: 0.8

---acggtaaatggaatttcttctttattaaga	CRISPR spacer
tatattgta---ggaatttcttatttattaaga	Protospacer
   *. ***   ********** **********

56. spacer 3.2|790712|30|NC_021837|CRISPRCasFinder,CRT matches to NZ_CP019923 (Borreliella burgdorferi strain PAbe plasmid p_lp28-1, complete sequence) position: , mismatch: 6, identity: 0.8

---acggtaaatggaatttcttctttattaaga	CRISPR spacer
tatattgta---ggaatttcttatttattaaga	Protospacer
   *. ***   ********** **********

57. spacer 3.2|790712|30|NC_021837|CRISPRCasFinder,CRT matches to NZ_CP025846 (Escherichia coli strain 720632 plasmid p720632_86, complete sequence) position: , mismatch: 6, identity: 0.8

acggtaaatggaatttcttctttattaaga	CRISPR spacer
acagaaggcgggatttcttctttattaaga	Protospacer
**.* *...**.******************

58. spacer 3.2|790712|30|NC_021837|CRISPRCasFinder,CRT matches to NZ_CP019762 (Borreliella burgdorferi strain B31_NRZ isolate B31 plasmid p_lp28-1) position: , mismatch: 6, identity: 0.8

---acggtaaatggaatttcttctttattaaga	CRISPR spacer
tatattgta---ggaatttcttatttattaaga	Protospacer
   *. ***   ********** **********

59. spacer 3.2|790712|30|NC_021837|CRISPRCasFinder,CRT matches to NC_011419 (Escherichia coli SE11 plasmid pSE11-1, complete sequence) position: , mismatch: 6, identity: 0.8

acggtaaatggaatttcttctttattaaga	CRISPR spacer
acagaaggcgggatttcttctttattaaga	Protospacer
**.* *...**.******************

60. spacer 3.2|790712|30|NC_021837|CRISPRCasFinder,CRT matches to NC_016904 (Escherichia coli KO11FL plasmid pEKO1101, complete sequence) position: , mismatch: 6, identity: 0.8

acggtaaatggaatttcttctttattaaga	CRISPR spacer
acagaaggcgggatttcttctttattaaga	Protospacer
**.* *...**.******************

61. spacer 3.2|790712|30|NC_021837|CRISPRCasFinder,CRT matches to NC_017665 (Escherichia coli W plasmid pRK1, complete sequence) position: , mismatch: 6, identity: 0.8

acggtaaatggaatttcttctttattaaga	CRISPR spacer
acagaaggcgggatttcttctttattaaga	Protospacer
**.* *...**.******************

62. spacer 3.10|791240|30|NC_021837|CRISPRCasFinder,CRT,PILER-CR matches to NC_007056 (Staphylococcus phage EW, complete genome) position: , mismatch: 6, identity: 0.8

ccgatagttttttaaaagtaact----ttacatt	CRISPR spacer
ccgatacttttataaaagtaactaatgtta----	Protospacer
****** **** ***********    ***

63. spacer 3.10|791240|30|NC_021837|CRISPRCasFinder,CRT,PILER-CR matches to AY954959 (Bacteriophage EW, complete genome) position: , mismatch: 6, identity: 0.8

ccgatagttttttaaaagtaact----ttacatt	CRISPR spacer
ccgatacttttataaaagtaactaatgtta----	Protospacer
****** **** ***********    ***

64. spacer 3.19|791834|30|NC_021837|CRISPRCasFinder,CRT,PILER-CR matches to CP025878 (Escherichia coli strain 503458 plasmid p503458_84, complete sequence) position: , mismatch: 6, identity: 0.8

tttagtttatcagtttatcacaatggaaga	CRISPR spacer
tttagtttatcattttatcataatgataag	Protospacer
************ *******.****. *..

65. spacer 3.19|791834|30|NC_021837|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025855 (Escherichia coli strain 510016 plasmid p510016_84, complete sequence) position: , mismatch: 6, identity: 0.8

tttagtttatcagtttatcacaatggaaga	CRISPR spacer
tttagtttatcattttatcataatgataag	Protospacer
************ *******.****. *..

66. spacer 3.19|791834|30|NC_021837|CRISPRCasFinder,CRT,PILER-CR matches to CP025926 (Escherichia coli strain 520873 plasmid p520873_84, complete sequence) position: , mismatch: 6, identity: 0.8

tttagtttatcagtttatcacaatggaaga	CRISPR spacer
tttagtttatcattttatcataatgataag	Protospacer
************ *******.****. *..

67. spacer 3.19|791834|30|NC_021837|CRISPRCasFinder,CRT,PILER-CR matches to CP025889 (Escherichia coli strain 503046 plasmid p503046_85, complete sequence) position: , mismatch: 6, identity: 0.8

tttagtttatcagtttatcacaatggaaga	CRISPR spacer
tttagtttatcattttatcataatgataag	Protospacer
************ *******.****. *..

68. spacer 3.19|791834|30|NC_021837|CRISPRCasFinder,CRT,PILER-CR matches to HE962497 (Streptococcus phage SP-QS1 complete genome) position: , mismatch: 6, identity: 0.8

tttagtttatcagtttatcacaatggaaga	CRISPR spacer
ttacgtttatcaatttatcacaatgattga	Protospacer
**  ********.************.  **

69. spacer 3.21|791966|30|NC_021837|CRISPRCasFinder,CRT,PILER-CR matches to NC_047872 (Listeria phage LMTA-94, complete genome) position: , mismatch: 6, identity: 0.8

ttggtttgatgaagaactattcagttgctt	CRISPR spacer
gtggtttgatgaagacttattcagcttttt	Protospacer
 ************** .*******.* .**

70. spacer 3.21|791966|30|NC_021837|CRISPRCasFinder,CRT,PILER-CR matches to KJ591605 (Listeria phage LMTA-57, complete genome) position: , mismatch: 6, identity: 0.8

ttggtttgatgaagaactattcagttgctt	CRISPR spacer
gtggtttgatgaagacttattcagcttttt	Protospacer
 ************** .*******.* .**

71. spacer 3.21|791966|30|NC_021837|CRISPRCasFinder,CRT,PILER-CR matches to MK792752 (UNVERIFIED: Listera phage vB-LmoM-SH3-3, complete genome) position: , mismatch: 6, identity: 0.8

ttggtttgatgaagaactattcagttgctt	CRISPR spacer
gtggtttgatgaagacttattcagcttttt	Protospacer
 ************** .*******.* .**

72. spacer 3.21|791966|30|NC_021837|CRISPRCasFinder,CRT,PILER-CR matches to KJ535721 (Listeria phage List-36, complete genome) position: , mismatch: 6, identity: 0.8

ttggtttgatgaagaactattcagttgctt	CRISPR spacer
gtggtttgatgaagacttattcagcttttt	Protospacer
 ************** .*******.* .**

73. spacer 3.21|791966|30|NC_021837|CRISPRCasFinder,CRT,PILER-CR matches to MN172529 (Listeria phage LP-039, complete genome) position: , mismatch: 6, identity: 0.8

ttggtttgatgaagaactattcagttgctt	CRISPR spacer
gtggtttgatgaagacttattcagcttttt	Protospacer
 ************** .*******.* .**

74. spacer 3.21|791966|30|NC_021837|CRISPRCasFinder,CRT,PILER-CR matches to MT438761 (Listeria virus P61, complete genome) position: , mismatch: 6, identity: 0.8

ttggtttgatgaagaactattcagttgctt	CRISPR spacer
gtggtttgatgaagacttattcagcttttt	Protospacer
 ************** .*******.* .**

75. spacer 3.21|791966|30|NC_021837|CRISPRCasFinder,CRT,PILER-CR matches to MT668624 (Listeria phage LP-Mix_6.2, complete genome) position: , mismatch: 6, identity: 0.8

ttggtttgatgaagaactattcagttgctt	CRISPR spacer
gtggtttgatgaagacttattcagcttttt	Protospacer
 ************** .*******.* .**

76. spacer 3.21|791966|30|NC_021837|CRISPRCasFinder,CRT,PILER-CR matches to MT178766 (Listeria virus P100plus, complete genome) position: , mismatch: 6, identity: 0.8

ttggtttgatgaagaactattcagttgctt	CRISPR spacer
gtggtttgatgaagacttattcagcttttt	Protospacer
 ************** .*******.* .**

77. spacer 3.21|791966|30|NC_021837|CRISPRCasFinder,CRT,PILER-CR matches to KJ668716 (Listeria phage LMTA-34 hypothetical protein genes, complete cds) position: , mismatch: 6, identity: 0.8

ttggtttgatgaagaactattcagttgctt	CRISPR spacer
gtggtttgatgaagacttattcagcttttt	Protospacer
 ************** .*******.* .**

78. spacer 3.21|791966|30|NC_021837|CRISPRCasFinder,CRT,PILER-CR matches to DQ003638 (Listeria phage A511, complete genome) position: , mismatch: 6, identity: 0.8

ttggtttgatgaagaactattcagttgctt	CRISPR spacer
gtggtttgatgaagacttattcagcttttt	Protospacer
 ************** .*******.* .**

79. spacer 3.21|791966|30|NC_021837|CRISPRCasFinder,CRT,PILER-CR matches to MT178767 (Listeria virus P200, complete genome) position: , mismatch: 6, identity: 0.8

ttggtttgatgaagaactattcagttgctt	CRISPR spacer
gtggtttgatgaagacttattcagcttttt	Protospacer
 ************** .*******.* .**

80. spacer 3.21|791966|30|NC_021837|CRISPRCasFinder,CRT,PILER-CR matches to KJ094033 (Listeria phage LP-048, complete genome) position: , mismatch: 6, identity: 0.8

ttggtttgatgaagaactattcagttgctt	CRISPR spacer
gtggtttgatgaagacttattcagcttttt	Protospacer
 ************** .*******.* .**

81. spacer 3.21|791966|30|NC_021837|CRISPRCasFinder,CRT,PILER-CR matches to NC_042048 (Listeria phage LMTA-34, complete genome) position: , mismatch: 6, identity: 0.8

ttggtttgatgaagaactattcagttgctt	CRISPR spacer
gtggtttgatgaagacttattcagcttttt	Protospacer
 ************** .*******.* .**

82. spacer 3.21|791966|30|NC_021837|CRISPRCasFinder,CRT,PILER-CR matches to NC_041862 (Listeria phage LP-064, complete genome) position: , mismatch: 6, identity: 0.8

ttggtttgatgaagaactattcagttgctt	CRISPR spacer
gtggtttgatgaagacttattcagcttttt	Protospacer
 ************** .*******.* .**

83. spacer 3.21|791966|30|NC_021837|CRISPRCasFinder,CRT,PILER-CR matches to JX126918 (Listeria phage LP-125, complete genome) position: , mismatch: 6, identity: 0.8

ttggtttgatgaagaactattcagttgctt	CRISPR spacer
gtggtttgatgaagacttattcagcttttt	Protospacer
 ************** .*******.* .**

84. spacer 3.21|791966|30|NC_021837|CRISPRCasFinder,CRT,PILER-CR matches to NC_024360 (Listeria phage LMSP-25, complete genome) position: , mismatch: 6, identity: 0.8

ttggtttgatgaagaactattcagttgctt	CRISPR spacer
gtggtttgatgaagacttattcagcttttt	Protospacer
 ************** .*******.* .**

85. spacer 3.21|791966|30|NC_021837|CRISPRCasFinder,CRT,PILER-CR matches to JQ797329 (Listeria phage vB_LmoM_AG20, complete genome) position: , mismatch: 6, identity: 0.8

ttggtttgatgaagaactattcagttgctt	CRISPR spacer
gtggtttgatgaagacttattcagcttttt	Protospacer
 ************** .*******.* .**

86. spacer 3.22|792032|30|NC_021837|CRISPRCasFinder,CRT,PILER-CR matches to DQ003637 (Listeria phage A500, complete genome) position: , mismatch: 6, identity: 0.8

acaataagatttttgaaggggatataggct	CRISPR spacer
gcaagaagattttcgaaggggatatagtaa	Protospacer
.*** ********.*************

87. spacer 3.22|792032|30|NC_021837|CRISPRCasFinder,CRT,PILER-CR matches to KP399677 (Listeria phage vB_LmoS_188, complete genome) position: , mismatch: 6, identity: 0.8

acaataagatttttgaaggggatataggct	CRISPR spacer
gcaagaagatttttgaaggggatattgtag	Protospacer
.*** ******************** *

88. spacer 3.22|792032|30|NC_021837|CRISPRCasFinder,CRT,PILER-CR matches to KJ094022 (Listeria phage LP-030-3, complete genome) position: , mismatch: 6, identity: 0.8

acaataagatttttgaaggggatataggct	CRISPR spacer
gcaagaagatttttgaaggggatattgtag	Protospacer
.*** ******************** *

89. spacer 3.22|792032|30|NC_021837|CRISPRCasFinder,CRT,PILER-CR matches to KP399678 (Listeria phage vB_LmoS_293, complete genome) position: , mismatch: 6, identity: 0.8

acaataagatttttgaaggggatataggct	CRISPR spacer
gcaagaagatttttgaaggggatattgtag	Protospacer
.*** ******************** *

90. spacer 3.2|790712|30|NC_021837|CRISPRCasFinder,CRT matches to NC_015909 (Borreliella bissettii DN127 plasmid cp32-5, complete sequence) position: , mismatch: 7, identity: 0.767

acggtaaatggaatttcttctttattaaga	CRISPR spacer
tctttaaatggaattgcttcttgattaaat	Protospacer
 *  *********** ****** *****.

91. spacer 3.2|790712|30|NC_021837|CRISPRCasFinder,CRT matches to NZ_CP028880 (Borreliella bavariensis PBi plasmid cp32-5, complete sequence) position: , mismatch: 7, identity: 0.767

acggtaaatggaatttcttctttattaaga	CRISPR spacer
tctttaaatggaattgcttcttgattaaat	Protospacer
 *  *********** ****** *****.

92. spacer 3.2|790712|30|NC_021837|CRISPRCasFinder,CRT matches to NZ_LN908215 (Clostridium beijerinckii isolate C. beijerinckii DSM 6423 plasmid III) position: , mismatch: 7, identity: 0.767

acggtaaatggaatttcttctttattaaga	CRISPR spacer
tcagaaaatggaatttcttcttttataaag	Protospacer
 *.* ******************  ***..

93. spacer 3.2|790712|30|NC_021837|CRISPRCasFinder,CRT matches to NZ_CP053952 (Bacillus cereus strain FDAARGOS_798 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

acggtaaatggaatttcttctttattaaga	CRISPR spacer
tcaaaaaatggaatttcttctgtattgaaa	Protospacer
 *.. **************** ****.*.*

94. spacer 3.2|790712|30|NC_021837|CRISPRCasFinder,CRT matches to NZ_CP053949 (Bacillus cereus strain FDAARGOS_799 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

acggtaaatggaatttcttctttattaaga	CRISPR spacer
tcaaaaaatggaatttcttctgtattgaaa	Protospacer
 *.. **************** ****.*.*

95. spacer 3.5|790910|30|NC_021837|CRISPRCasFinder,CRT matches to MK360916 (Acinetobacter baumannii plasmid pAB18PR065-MCR-4.3, complete sequence) position: , mismatch: 7, identity: 0.767

ctttcatcaagtgtattttttgcgacaaga	CRISPR spacer
ctttcctcaagtgtattttttgcagcctat	Protospacer
***** *****************..*  .

96. spacer 3.5|790910|30|NC_021837|CRISPRCasFinder,CRT matches to MF543359 (Salmonella sp. plasmid pMCR_R3445, complete sequence) position: , mismatch: 7, identity: 0.767

ctttcatcaagtgtattttttgcgacaaga	CRISPR spacer
ctttcctcaagtgtattttttgcagcctat	Protospacer
***** *****************..*  .

97. spacer 3.5|790910|30|NC_021837|CRISPRCasFinder,CRT matches to NZ_CP033872 (Acinetobacter baumannii strain MRSN15313 plasmid pAb-MCR4.3, complete sequence) position: , mismatch: 7, identity: 0.767

ctttcatcaagtgtattttttgcgacaaga	CRISPR spacer
ctttcctcaagtgtattttttgcagcctat	Protospacer
***** *****************..*  .

98. spacer 3.5|790910|30|NC_021837|CRISPRCasFinder,CRT matches to NZ_CP040891 (Leclercia adecarboxylata strain Z96-1 plasmid pMCR-Z96-1, complete sequence) position: , mismatch: 7, identity: 0.767

ctttcatcaagtgtattttttgcgacaaga	CRISPR spacer
ctttcctcaagtgtattttttgcagcctat	Protospacer
***** *****************..*  .

99. spacer 3.5|790910|30|NC_021837|CRISPRCasFinder,CRT matches to NZ_CP038261 (Acinetobacter baumannii strain 39741 plasmid pEH_mcr4.3, complete sequence) position: , mismatch: 7, identity: 0.767

ctttcatcaagtgtattttttgcgacaaga	CRISPR spacer
ctttcctcaagtgtattttttgcagcctat	Protospacer
***** *****************..*  .

100. spacer 3.5|790910|30|NC_021837|CRISPRCasFinder,CRT matches to NZ_MG800340 (Salmonella enterica subsp. enterica serovar Typhimurium strain AB243 plasmid pMCR-4.2_AB243, complete sequence) position: , mismatch: 7, identity: 0.767

ctttcatcaagtgtattttttgcgacaaga	CRISPR spacer
ctttcctcaagtgtattttttgcagcctat	Protospacer
***** *****************..*  .

101. spacer 3.5|790910|30|NC_021837|CRISPRCasFinder,CRT matches to NZ_MH061380 (Enterobacter cloacae strain En_MCR4 plasmid pEn_MCR4, complete sequence) position: , mismatch: 7, identity: 0.767

ctttcatcaagtgtattttttgcgacaaga	CRISPR spacer
ctttcctcaagtgtattttttgcagcctat	Protospacer
***** *****************..*  .

102. spacer 3.5|790910|30|NC_021837|CRISPRCasFinder,CRT matches to NZ_CP038265 (Acinetobacter baumannii strain LEV1449/17Ec plasmid pEC_mcr4.3, complete sequence) position: , mismatch: 7, identity: 0.767

ctttcatcaagtgtattttttgcgacaaga	CRISPR spacer
ctttcctcaagtgtattttttgcagcctat	Protospacer
***** *****************..*  .

103. spacer 3.5|790910|30|NC_021837|CRISPRCasFinder,CRT matches to NZ_MG800339 (Escherichia coli strain R4287 plasmid pMCR-4.2_R4287, complete sequence) position: , mismatch: 7, identity: 0.767

ctttcatcaagtgtattttttgcgacaaga	CRISPR spacer
ctttcctcaagtgtattttttgcagcctat	Protospacer
***** *****************..*  .

104. spacer 3.5|790910|30|NC_021837|CRISPRCasFinder,CRT matches to NZ_CP014570 (Campylobacter fetus subsp. venerealis strain 01/165 plasmid mp2, complete sequence) position: , mismatch: 7, identity: 0.767

ctttcatcaagtgtattttttgcgacaaga	CRISPR spacer
attgcatcaagtgtattttttggtgcttga	Protospacer
 ** ******************  .*  **

105. spacer 3.22|792032|30|NC_021837|CRISPRCasFinder,CRT,PILER-CR matches to NC_027989 (Campylobacter phage vB_CcoM-IBB_35 clone Contig1, complete genome) position: , mismatch: 7, identity: 0.767

acaataagatttttgaaggggatataggct	CRISPR spacer
gcaaaaagatttatgaaggggatattttat	Protospacer
.*** ******* ************    *

106. spacer 3.22|792032|30|NC_021837|CRISPRCasFinder,CRT,PILER-CR matches to KT898134 (Aeromonas phage phiARM81mr, complete genome) position: , mismatch: 7, identity: 0.767

acaataagatttttgaaggggatataggct	CRISPR spacer
ttgttgagatttttgaaggcgagataggct	Protospacer
 .. *.************* ** *******

107. spacer 3.22|792032|30|NC_021837|CRISPRCasFinder,CRT,PILER-CR matches to NC_042112 (Campylobacter phage CP81, complete genome) position: , mismatch: 7, identity: 0.767

acaataagatttttgaaggggata---taggct	CRISPR spacer
gtaaaaagatttttgaaggtgatattttag---	Protospacer
..** ************** ****   ***

108. spacer 3.22|792032|30|NC_021837|CRISPRCasFinder,CRT,PILER-CR matches to KF148616 (Campylobacter phage CP8, complete genome) position: , mismatch: 7, identity: 0.767

acaataagatttttgaaggggata---taggct	CRISPR spacer
gtaaaaagatttttgaaggtgatattttag---	Protospacer
..** ************** ****   ***

109. spacer 3.22|792032|30|NC_021837|CRISPRCasFinder,CRT,PILER-CR matches to NC_016562 (Campylobacter phage CPX, complete genome) position: , mismatch: 7, identity: 0.767

acaataagatttttgaaggggata---taggct	CRISPR spacer
gtaaaaagatttttgaaggtgatattttag---	Protospacer
..** ************** ****   ***

110. spacer 3.22|792032|30|NC_021837|CRISPRCasFinder,CRT,PILER-CR matches to JX569801 (Campylobacter phage CP30A, complete genome) position: , mismatch: 7, identity: 0.767

acaataagatttttgaaggggata---taggct	CRISPR spacer
gtaaaaagatttttgaaggtgatattttag---	Protospacer
..** ************** ****   ***

111. spacer 3.23|792098|30|NC_021837|CRISPRCasFinder,CRT matches to KT878766 (Staphylococcus phage P1105, complete genome) position: , mismatch: 7, identity: 0.767

tgtctgaatgtagttgatatctttaacttg	CRISPR spacer
aattggtatgttgttcatatctttaacttg	Protospacer
 .*. * **** *** **************

112. spacer 3.23|792098|30|NC_021837|CRISPRCasFinder,CRT matches to NC_025460 (Staphylococcus phage phiSa119, complete genome) position: , mismatch: 7, identity: 0.767

tgtctgaatgtagttgatatctttaacttg	CRISPR spacer
aattggtatgttgttcatatctttaacttg	Protospacer
 .*. * **** *** **************

113. spacer 1.9|10819|36|NC_021837|CRT matches to MW084976 (Bacillus phage Kirov, complete genome) position: , mismatch: 8, identity: 0.778

ttaatttgatagtcataatttatttcctcctatttt	CRISPR spacer
ttcttacgatagccattatttatttcctcctattaa	Protospacer
**  * .*****.*** *****************

114. spacer 3.2|790712|30|NC_021837|CRISPRCasFinder,CRT matches to NZ_KT897276 (Clostridium botulinum strain INGR16-02E1 plasmid pINGR16-02E1, complete sequence) position: , mismatch: 8, identity: 0.733

acggtaaatggaatttcttctttattaaga	CRISPR spacer
atatcaaatggaatttcaactttattaatt	Protospacer
*.. .************  *********

115. spacer 3.2|790712|30|NC_021837|CRISPRCasFinder,CRT matches to NZ_KT897280 (Clostridium botulinum strain FI1111E1 plasmid pFI1111E1, complete sequence) position: , mismatch: 8, identity: 0.733

acggtaaatggaatttcttctttattaaga	CRISPR spacer
atatcaaatggaatttcaactttattaatt	Protospacer
*.. .************  *********

116. spacer 3.2|790712|30|NC_021837|CRISPRCasFinder,CRT matches to NZ_KT897275 (Clostridium botulinum strain IFR 12/29 plasmid p12/29, complete sequence) position: , mismatch: 8, identity: 0.733

acggtaaatggaatttcttctttattaaga	CRISPR spacer
atatcaaatggaatttcaactttattaatt	Protospacer
*.. .************  *********

117. spacer 3.2|790712|30|NC_021837|CRISPRCasFinder,CRT matches to NZ_KT897277 (Clostridium botulinum strain ST0210E1 plasmid pST0210E1, complete sequence) position: , mismatch: 8, identity: 0.733

acggtaaatggaatttcttctttattaaga	CRISPR spacer
atatcaaatggaatttcaactttattaatt	Protospacer
*.. .************  *********

118. spacer 3.2|790712|30|NC_021837|CRISPRCasFinder,CRT matches to NZ_KT897278 (Clostridium botulinum strain FWSKR40E1 plasmid pFWSKR40E1, complete sequence) position: , mismatch: 8, identity: 0.733

acggtaaatggaatttcttctttattaaga	CRISPR spacer
atatcaaatggaatttcaactttattaatt	Protospacer
*.. .************  *********

119. spacer 3.2|790712|30|NC_021837|CRISPRCasFinder,CRT matches to NZ_KT897279 (Clostridium botulinum strain SWKR38E2 plasmid pSWKR38E2, complete sequence) position: , mismatch: 8, identity: 0.733

acggtaaatggaatttcttctttattaaga	CRISPR spacer
atatcaaatggaatttcaactttattaatt	Protospacer
*.. .************  *********

120. spacer 3.2|790712|30|NC_021837|CRISPRCasFinder,CRT matches to NZ_CP031409 (Borreliella burgdorferi strain MM1 plasmid plsm_lp28-8, complete sequence) position: , mismatch: 8, identity: 0.733

acggtaaatggaatttcttctttattaaga	CRISPR spacer
tatgttgtgggaatttcttatttattaaga	Protospacer
   ** .  ********** **********

121. spacer 3.2|790712|30|NC_021837|CRISPRCasFinder,CRT matches to NZ_CP013278 (Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-3-235K, complete sequence) position: , mismatch: 8, identity: 0.733

acggtaaatggaatttcttctttattaaga	CRISPR spacer
aataaaaatggaatttcttcttctttaatt	Protospacer
*  . *****************. ****

122. spacer 3.2|790712|30|NC_021837|CRISPRCasFinder,CRT matches to NC_018509 (Bacillus thuringiensis HD-789 plasmid pBTHD789-2, complete sequence) position: , mismatch: 8, identity: 0.733

acggtaaatggaatttcttctttattaaga	CRISPR spacer
aataaaaatggaatttcttcttctttaatt	Protospacer
*  . *****************. ****

123. spacer 3.2|790712|30|NC_021837|CRISPRCasFinder,CRT matches to NZ_CP051859 (Bacillus thuringiensis serovar israelensis strain BGSC 4Q7rifR plasmid pBtic235, complete sequence) position: , mismatch: 8, identity: 0.733

acggtaaatggaatttcttctttattaaga	CRISPR spacer
aataaaaatggaatttcttcttctttaatt	Protospacer
*  . *****************. ****

124. spacer 3.2|790712|30|NC_021837|CRISPRCasFinder,CRT matches to NZ_CP009347 (Bacillus thuringiensis HD1002 plasmid 3, complete sequence) position: , mismatch: 8, identity: 0.733

acggtaaatggaatttcttctttattaaga	CRISPR spacer
aataaaaatggaatttcttcttctttaatt	Protospacer
*  . *****************. ****

125. spacer 3.2|790712|30|NC_021837|CRISPRCasFinder,CRT matches to NZ_CP045025 (Bacillus thuringiensis strain JW-1 plasmid p3, complete sequence) position: , mismatch: 8, identity: 0.733

acggtaaatggaatttcttctttattaaga	CRISPR spacer
aataaaaatggaatttcttcttctttaatt	Protospacer
*  . *****************. ****

126. spacer 3.2|790712|30|NC_021837|CRISPRCasFinder,CRT matches to NZ_CP016590 (Bacillus thuringiensis strain KNU-07 plasmid pBTKNU07-02, complete sequence) position: , mismatch: 8, identity: 0.733

acggtaaatggaatttcttctttattaaga	CRISPR spacer
tttgaaaatgggatttctgctttattaaat	Protospacer
 . * ******.****** *********.

127. spacer 3.2|790712|30|NC_021837|CRISPRCasFinder,CRT matches to MT074137 (Bacteroides phage DAC16, complete genome) position: , mismatch: 8, identity: 0.733

acggtaaatggaatttcttctttattaaga	CRISPR spacer
tctttaaattgtatttcttctttattagct	Protospacer
 *  ***** * ***************.

128. spacer 3.2|790712|30|NC_021837|CRISPRCasFinder,CRT matches to MT074142 (Bacteroides phage DAC23, complete genome) position: , mismatch: 8, identity: 0.733

acggtaaatggaatttcttctttattaaga	CRISPR spacer
tctttaaattgtatttcttctttattagct	Protospacer
 *  ***** * ***************.

129. spacer 3.2|790712|30|NC_021837|CRISPRCasFinder,CRT matches to MT074141 (Bacteroides phage DAC22, complete genome) position: , mismatch: 8, identity: 0.733

acggtaaatggaatttcttctttattaaga	CRISPR spacer
tctttaaattgtatttcttctttattagct	Protospacer
 *  ***** * ***************.

130. spacer 3.2|790712|30|NC_021837|CRISPRCasFinder,CRT matches to MT074139 (Bacteroides phage DAC19, complete genome) position: , mismatch: 8, identity: 0.733

acggtaaatggaatttcttctttattaaga	CRISPR spacer
tctttaaattgtatttcttctttattagct	Protospacer
 *  ***** * ***************.

131. spacer 3.2|790712|30|NC_021837|CRISPRCasFinder,CRT matches to MN693433 (Marine virus AFVG_25M397, complete genome) position: , mismatch: 8, identity: 0.733

acggtaaatggaatttcttctttattaaga	CRISPR spacer
tctctaaatggaatttcttctaaattagtt	Protospacer
 *  *****************  ****.

132. spacer 3.2|790712|30|NC_021837|CRISPRCasFinder,CRT matches to MT074140 (Bacteroides phage DAC20, complete genome) position: , mismatch: 8, identity: 0.733

acggtaaatggaatttcttctttattaaga	CRISPR spacer
tctttaaattgtatttcttctttattagct	Protospacer
 *  ***** * ***************.

133. spacer 3.2|790712|30|NC_021837|CRISPRCasFinder,CRT matches to AP022644 (Bacillus wiedmannii PL1 plasmid pBwiPL1-1 DNA, complete sequence) position: , mismatch: 8, identity: 0.733

acggtaaatggaatttcttctttattaaga	CRISPR spacer
tttgaaaatgggatttctgctttattaaat	Protospacer
 . * ******.****** *********.

134. spacer 3.2|790712|30|NC_021837|CRISPRCasFinder,CRT matches to NZ_CP012100 (Bacillus thuringiensis strain HS18-1 plasmid pHS18-1, complete sequence) position: , mismatch: 8, identity: 0.733

acggtaaatggaatttcttctttattaaga	CRISPR spacer
tttgaaaatgggatttctgctttattaaat	Protospacer
 . * ******.****** *********.

135. spacer 3.2|790712|30|NC_021837|CRISPRCasFinder,CRT matches to NZ_CP053971 (Bacillus thuringiensis strain FDAARGOS_796 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.733

acggtaaatggaatttcttctttattaaga	CRISPR spacer
aataaaaatggaatttcttcttctttaatt	Protospacer
*  . *****************. ****

136. spacer 3.2|790712|30|NC_021837|CRISPRCasFinder,CRT matches to NZ_CP039724 (Bacillus thuringiensis strain BT-59 plasmid p3, complete sequence) position: , mismatch: 8, identity: 0.733

acggtaaatggaatttcttctttattaaga	CRISPR spacer
aataaaaatggaatttcttcttctttaatt	Protospacer
*  . *****************. ****

137. spacer 3.2|790712|30|NC_021837|CRISPRCasFinder,CRT matches to NZ_CP030336 (Escherichia coli strain AR_451 plasmid unnamed4) position: , mismatch: 8, identity: 0.733

acggtaaatggaatttcttctttattaaga	CRISPR spacer
gctgagggcgggatttcttctttattaaga	Protospacer
.* * ....**.******************

138. spacer 3.2|790712|30|NC_021837|CRISPRCasFinder,CRT matches to NZ_CP018741 (Bacillus cereus strain FORC_047 plasmid pFORC47_1, complete sequence) position: , mismatch: 8, identity: 0.733

acggtaaatggaatttcttctttattaaga	CRISPR spacer
tttgaaaatgggatttctgctttattaaat	Protospacer
 . * ******.****** *********.

139. spacer 3.2|790712|30|NC_021837|CRISPRCasFinder,CRT matches to MH511048 (Podoviridae sp. isolate ctbh1, complete genome) position: , mismatch: 8, identity: 0.733

acggtaaatggaatttcttctttattaaga	CRISPR spacer
aattggtatgcaatttcttctgtattaaga	Protospacer
*    . *** ********** ********

140. spacer 3.5|790910|30|NC_021837|CRISPRCasFinder,CRT matches to NZ_CP013139 (Pseudoalteromonas sp. Bsw20308 plasmid pPBSW1, complete sequence) position: , mismatch: 8, identity: 0.733

ctttcatcaagtgtattttttgcgacaaga	CRISPR spacer
atttcatcaagtttattttttggtgcgtgt	Protospacer
 *********** *********  .*. *

141. spacer 3.5|790910|30|NC_021837|CRISPRCasFinder,CRT matches to MN693105 (Marine virus AFVG_25M79, complete genome) position: , mismatch: 8, identity: 0.733

ctttcatcaagtgtattttttgcgacaaga	CRISPR spacer
acttcatcaagtttattttttgcaccttta	Protospacer
 .********** **********. *   *

142. spacer 3.5|790910|30|NC_021837|CRISPRCasFinder,CRT matches to MN693550 (Marine virus AFVG_25M93, complete genome) position: , mismatch: 8, identity: 0.733

ctttcatcaagtgtattttttgcgacaaga	CRISPR spacer
acttcatcaagtttattttttgcaccttta	Protospacer
 .********** **********. *   *

143. spacer 3.5|790910|30|NC_021837|CRISPRCasFinder,CRT matches to MN693245 (Marine virus AFVG_25M69, complete genome) position: , mismatch: 8, identity: 0.733

ctttcatcaagtgtattttttgcgacaaga	CRISPR spacer
acttcatcaagtttattttttgcaccttta	Protospacer
 .********** **********. *   *

144. spacer 3.10|791240|30|NC_021837|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR214939 (Mycoplasma salivarium strain NCTC10113 plasmid 2) position: , mismatch: 8, identity: 0.733

ccgatagttttttaaaagtaactttacatt	CRISPR spacer
gtaaagcttttttaacagtaactttagatt	Protospacer
 ..* . ******** ********** ***

145. spacer 3.10|791240|30|NC_021837|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034685 (Bacillus sp. BD59S plasmid pBTBD59S2, complete sequence) position: , mismatch: 8, identity: 0.733

ccgatagttttttaaaagtaactttacatt	CRISPR spacer
aacttcattttttaaaagtaacattacttt	Protospacer
    * .*************** **** **

146. spacer 3.10|791240|30|NC_021837|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016589 (Bacillus thuringiensis strain KNU-07 plasmid pBTKNU07-01, complete sequence) position: , mismatch: 8, identity: 0.733

ccgatagttttttaaaagtaactttacatt	CRISPR spacer
ttcgaatttttttaaaagaaaatttacatt	Protospacer
.. . * *********** ** ********

147. spacer 3.10|791240|30|NC_021837|CRISPRCasFinder,CRT,PILER-CR matches to MN693930 (Marine virus AFVG_250M489, complete genome) position: , mismatch: 8, identity: 0.733

ccgatagttttttaaaagtaactttacatt	CRISPR spacer
atgatagttttttaaatgttacttttggta	Protospacer
 .************** ** *****  .*

148. spacer 3.11|791306|30|NC_021837|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP040346 (Bacillus albus strain DLOU-Yingkou plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.733

cactacattcaaatataaaccttcacaagc	CRISPR spacer
tcctacattaaaacataaaccttcatttgg	Protospacer
. ******* ***.***********.  *

149. spacer 3.13|791438|30|NC_021837|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020811 (Mycobacterium dioxanotrophicus strain PH-06 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.733

tggcgatgcgttgttaccgatagctgaaat	CRISPR spacer
cggtagcgcgttgttaccgatcgctgaatc	Protospacer
.**....************** ****** .

150. spacer 3.21|791966|30|NC_021837|CRISPRCasFinder,CRT,PILER-CR matches to MK552327 (Pseudomonas phage Psa21, complete genome) position: , mismatch: 8, identity: 0.733

ttggtttgatgaagaactattcagttgctt	CRISPR spacer
ttggttggatgaagaaatattcaactttgc	Protospacer
****** ********* ******..* . .

151. spacer 3.22|792032|30|NC_021837|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP050185 (Bacillus thuringiensis strain HER1410 plasmid pLUSID2, complete sequence) position: , mismatch: 8, identity: 0.733

acaataagatttttgaaggggatataggct	CRISPR spacer
acaatgcgatttttgaaggggataagttac	Protospacer
*****. ***************** .   .

152. spacer 3.22|792032|30|NC_021837|CRISPRCasFinder,CRT,PILER-CR matches to NC_021789 (Cellulophaga phage phi19:3, complete genome) position: , mismatch: 8, identity: 0.733

acaataagatttttgaaggggatataggct	CRISPR spacer
ggaatgagatttatgaaggggatatactaa	Protospacer
. ***.****** *************

153. spacer 3.22|792032|30|NC_021837|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP037748 (Campylobacter helveticus strain 2013D-9613 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.733

acaataagatttttgaaggggatataggct	CRISPR spacer
gaaataagatttatgcaggggatattgtaa	Protospacer
. ********** ** ********* *

154. spacer 3.22|792032|30|NC_021837|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020480 (Campylobacter helveticus strain ATCC 51209 plasmid pHELV-2, complete sequence) position: , mismatch: 8, identity: 0.733

acaataagatttttgaaggggatataggct	CRISPR spacer
gaaataagatttatgcaggggatattgtaa	Protospacer
. ********** ** ********* *

155. spacer 3.22|792032|30|NC_021837|CRISPRCasFinder,CRT,PILER-CR matches to MK449012 (Streptococcus phage Javan94, complete genome) position: , mismatch: 8, identity: 0.733

acaataagatttttgaaggggatataggct	CRISPR spacer
gcgttaagatttttgatggggatattgtaa	Protospacer
.*. ************ ******** *

156. spacer 3.22|792032|30|NC_021837|CRISPRCasFinder,CRT,PILER-CR matches to KF751797 (Campylobacter phage CJIE4-5, complete genome) position: , mismatch: 8, identity: 0.733

acaataagatttttgaaggggatataggct	CRISPR spacer
gaaataagatttatgaaggagatattttat	Protospacer
. ********** ******.*****    *

157. spacer 3.22|792032|30|NC_021837|CRISPRCasFinder,CRT,PILER-CR matches to KF751794 (Campylobacter phage CJIE4-2, complete genome) position: , mismatch: 8, identity: 0.733

acaataagatttttgaaggggatataggct	CRISPR spacer
gaaataagatttatgaaggagatattttat	Protospacer
. ********** ******.*****    *

158. spacer 3.22|792032|30|NC_021837|CRISPRCasFinder,CRT,PILER-CR matches to KF751795 (Campylobacter phage CJIE4-3, complete genome) position: , mismatch: 8, identity: 0.733

acaataagatttttgaaggggatataggct	CRISPR spacer
gaaataagatttatgaaggagatattttat	Protospacer
. ********** ******.*****    *

159. spacer 3.22|792032|30|NC_021837|CRISPRCasFinder,CRT,PILER-CR matches to KF751796 (Campylobacter phage CJIE4-4, complete genome) position: , mismatch: 8, identity: 0.733

acaataagatttttgaaggggatataggct	CRISPR spacer
gaaataagatttatgaaggagatattttat	Protospacer
. ********** ******.*****    *

160. spacer 3.22|792032|30|NC_021837|CRISPRCasFinder,CRT,PILER-CR matches to MK448673 (Streptococcus phage Javan119, complete genome) position: , mismatch: 8, identity: 0.733

acaataagatttttgaaggggatataggct	CRISPR spacer
gcgttaagatttttgatggggatattgtaa	Protospacer
.*. ************ ******** *

161. spacer 3.22|792032|30|NC_021837|CRISPRCasFinder,CRT,PILER-CR matches to KF751793 (Campylobacter phage CJIE4-1, complete genome) position: , mismatch: 8, identity: 0.733

acaataagatttttgaaggggatataggct	CRISPR spacer
gaaataagatttatgaaggagatattttat	Protospacer
. ********** ******.*****    *

162. spacer 3.23|792098|30|NC_021837|CRISPRCasFinder,CRT matches to JN638751 (Bacillus phage G, complete genome) position: , mismatch: 8, identity: 0.733

tgtctgaatgtagttgatatctttaacttg	CRISPR spacer
taaatccttgtagttgatacctttaacttt	Protospacer
*.  *   ***********.*********

163. spacer 1.2|10818|37|NC_021837|PILER-CR,CRISPRCasFinder matches to MW084976 (Bacillus phage Kirov, complete genome) position: , mismatch: 9, identity: 0.757

cttaatttgatagtcataatttatttcctcctatttt	CRISPR spacer
tttcttacgatagccattatttatttcctcctattaa	Protospacer
.**  * .*****.*** *****************

164. spacer 3.2|790712|30|NC_021837|CRISPRCasFinder,CRT matches to NZ_CP014419 (Staphylococcus aureus strain USA300-SUR15 plasmid pUSA08-1-SUR15, complete sequence) position: , mismatch: 9, identity: 0.7

acggtaaatggaatttcttctttattaaga	CRISPR spacer
ttccataatcgaatttcttctttatcaagt	Protospacer
 .    *** ***************.***

165. spacer 3.2|790712|30|NC_021837|CRISPRCasFinder,CRT matches to NZ_CP021839 (Anoxybacillus flavithermus strain 52-1A plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.7

acggtaaatggaatttcttctttattaaga	CRISPR spacer
gttttcgttggaattccttctttattaagc	Protospacer
..  * . *******.*************

166. spacer 3.3|790778|30|NC_021837|CRISPRCasFinder,CRT matches to MN445183 (Salmonella phage vB_SalM_SA002, complete genome) position: , mismatch: 9, identity: 0.7

atgcgtttggtacagtaccttgaacaacgt	CRISPR spacer
atgcgtttggttcagtaccttcagggttac	Protospacer
*********** ********* *. . ...

167. spacer 3.5|790910|30|NC_021837|CRISPRCasFinder,CRT matches to MN693208 (Marine virus AFVG_25M383, complete genome) position: , mismatch: 9, identity: 0.7

ctttcatcaagtgtattttttgcgacaaga	CRISPR spacer
acttcatcaagtttattttttgcacctttg	Protospacer
 .********** **********. *   .

168. spacer 3.5|790910|30|NC_021837|CRISPRCasFinder,CRT matches to MN693097 (Marine virus AFVG_25M78, complete genome) position: , mismatch: 9, identity: 0.7

ctttcatcaagtgtattttttgcgacaaga	CRISPR spacer
acttcatcaagtttattttttgcacctttg	Protospacer
 .********** **********. *   .

169. spacer 3.5|790910|30|NC_021837|CRISPRCasFinder,CRT matches to MN693515 (Marine virus AFVG_25M70, complete genome) position: , mismatch: 9, identity: 0.7

ctttcatcaagtgtattttttgcgacaaga	CRISPR spacer
acttcatcaagtttattttttgcacctttg	Protospacer
 .********** **********. *   .

170. spacer 3.5|790910|30|NC_021837|CRISPRCasFinder,CRT matches to MN693286 (Marine virus AFVG_25M92, complete genome) position: , mismatch: 9, identity: 0.7

ctttcatcaagtgtattttttgcgacaaga	CRISPR spacer
acttcatcaagtttattttttgcacccttg	Protospacer
 .********** **********. *   .

171. spacer 3.5|790910|30|NC_021837|CRISPRCasFinder,CRT matches to MN693549 (Marine virus AFVG_25M89, complete genome) position: , mismatch: 9, identity: 0.7

ctttcatcaagtgtattttttgcgacaaga	CRISPR spacer
acttcatcaagtttattttttgcacctttg	Protospacer
 .********** **********. *   .

172. spacer 3.8|791108|30|NC_021837|CRISPRCasFinder,CRT,PILER-CR matches to MT952853 (Arthrobacter phage Orcanus, complete genome) position: , mismatch: 9, identity: 0.7

tttagggaagcgcccttcttcccgttgaaa	CRISPR spacer
gagccggaagcgcccttctgcccgtcgagg	Protospacer
     ************** *****.**..

173. spacer 3.10|791240|30|NC_021837|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP053657 (Bacillus cereus strain CTMA_1571 plasmid p.1, complete sequence) position: , mismatch: 9, identity: 0.7

ccgatagttttttaaaagtaactttacatt	CRISPR spacer
gaatgagttttttaaaagtaattttagttc	Protospacer
  .  ****************.****  *.

174. spacer 3.11|791306|30|NC_021837|CRISPRCasFinder,CRT,PILER-CR matches to AP014362 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S41-C102, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 9, identity: 0.7

cactacattcaaatataaaccttcacaagc	CRISPR spacer
atatactttcaaatataaaccttcctactg	Protospacer
   *** ***************** .*

175. spacer 3.19|791834|30|NC_021837|CRISPRCasFinder,CRT,PILER-CR matches to NC_017296 (Clostridium acetobutylicum EA 2018 plasmid pEA2018, complete sequence) position: , mismatch: 9, identity: 0.7

tttagtttatcagtttatcacaatggaaga	CRISPR spacer
aaacaaatatcagtttattacaatggaagt	Protospacer
    .  ***********.**********

176. spacer 3.19|791834|30|NC_021837|CRISPRCasFinder,CRT,PILER-CR matches to NC_015686 (Clostridium acetobutylicum DSM 1731 plasmid pSMBa, complete sequence) position: , mismatch: 9, identity: 0.7

tttagtttatcagtttatcacaatggaaga	CRISPR spacer
aaacaaatatcagtttattacaatggaagt	Protospacer
    .  ***********.**********

177. spacer 3.19|791834|30|NC_021837|CRISPRCasFinder,CRT,PILER-CR matches to NC_001988 (Clostridium acetobutylicum ATCC 824 plasmid pSOL1, complete sequence) position: , mismatch: 9, identity: 0.7

tttagtttatcagtttatcacaatggaaga	CRISPR spacer
aaacaaatatcagtttattacaatggaagt	Protospacer
    .  ***********.**********

178. spacer 3.22|792032|30|NC_021837|CRISPRCasFinder,CRT,PILER-CR matches to MH107028 (Campylobacter phage CP39, partial genome) position: , mismatch: 9, identity: 0.7

acaataagatttttgaaggggatataggct	CRISPR spacer
gaaaaaagatttatgaaggggatattatta	Protospacer
. ** ******* ************ . .

179. spacer 1.8|10755|35|NC_021837|CRT matches to NZ_CP029455 (Bacillus cereus strain FORC087 plasmid pFORC087.1, complete sequence) position: , mismatch: 11, identity: 0.686

gaaattgtaaaatctatatccgttgattcaacaaa	CRISPR spacer
aagattttaaaatctatatcggttgatttttttct	Protospacer
.*.*** ************* *******.  .

180. spacer 1.8|10755|35|NC_021837|CRT matches to NZ_CP015592 (Bacillus cereus strain AR156 plasmid pAR460, complete sequence) position: , mismatch: 11, identity: 0.686

gaaattgtaaaatctatatccgttgattcaacaaa	CRISPR spacer
aagattttaaaatctatatcggttgattttttctt	Protospacer
.*.*** ************* *******.  .

181. spacer 1.8|10755|35|NC_021837|CRT matches to NZ_CP009368 (Bacillus cereus strain FM1 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.686

gaaattgtaaaatctatatccgttgattcaacaaa	CRISPR spacer
aagattttaaaatctatatcggttgatttttttct	Protospacer
.*.*** ************* *******.  .

182. spacer 1.8|10755|35|NC_021837|CRT matches to NZ_CP009336 (Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence) position: , mismatch: 11, identity: 0.686

gaaattgtaaaatctatatccgttgattcaacaaa	CRISPR spacer
aagattttaaaatctatatcggttgatttttttct	Protospacer
.*.*** ************* *******.  .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

392690 : 399215

Streptococcus_pyogenes_phage(33.33%)

tail

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_009911828.1\|392690_393509_-\|tail	phage tail family protein	A0A060AFE1	Staphylococcus_phage	7.2e-39	35.0
WP_023548151.1\|393505_395374_-	membrane protein	A0A097PAU2	Streptococcus_pyogenes_phage	3.5e-20	45.8
WP_014601581.1\|395360_395765_-	hypothetical protein	NA	NA	NA	NA
WP_003721745.1\|395806_396109_-	hypothetical protein	NA	NA	NA	NA
WP_003721744.1\|396156_396669_-\|tail	phage major tail protein, TP901-1 family	A0A097PBF4	Streptococcus_pyogenes_phage	1.2e-47	62.7
WP_012952083.1\|396681_397071_-	DUF5072 family protein	NA	NA	NA	NA
WP_003732220.1\|397348_397765_-	hypothetical protein	A8ASQ1	Listeria_phage	1.3e-20	39.3
WP_003732219.1\|397776_398205_-	hypothetical protein	NA	NA	NA	NA
WP_003721740.1\|398421_398757_+	helix-turn-helix transcriptional regulator	A0A2H4JAR9	uncultured_Caudovirales_phage	4.0e-20	52.5
WP_014601579.1\|398762_399215_+	ImmA/IrrE family metallo-endopeptidase	A0A059T7S0	Listeria_phage	5.2e-31	47.9

DBSCAN-SWA_2

623837 : 633869

Tupanvirus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003725314.1\|623837_625292_-	glycoside hydrolase family 1 protein	A0A0B5JD41	Pandoravirus	1.9e-50	30.3
WP_077316652.1\|625319_625628_-	hypothetical protein	NA	NA	NA	NA
WP_023548256.1\|625806_627417_+	ABC-F family ATP-binding cassette domain-containing protein	A0A2K9L3Z8	Tupanvirus	5.4e-46	29.5
WP_003728635.1\|627474_628005_+	ADP-ribose-binding protein	A0A0K1L687	Scale_drop_disease_virus	1.7e-28	49.3
WP_003722118.1\|628292_629759_+	IMP dehydrogenase	A0A1V0SHK8	Klosneuvirus	8.0e-97	40.0
WP_015456051.1\|629919_631692_+	DNA helicase RecQ	A0A2K9L3P7	Tupanvirus	6.3e-80	37.1
WP_023548258.1\|631715_633869_+	DNA topoisomerase III	A0A1X9I6W8	Streptococcus_phage	8.8e-44	34.1

DBSCAN-SWA_3

922535 : 930379

Streptococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003722610.1\|922535_923495_+	thioredoxin-disulfide reductase	G3MA85	Bacillus_virus	2.0e-88	53.7
WP_023548374.1\|923613_924597_+	UDP-glucose 4-epimerase GalE	A0A2K9L1R4	Tupanvirus	4.4e-51	36.9
WP_023548376.1\|924613_925675_+	galactose mutarotase	NA	NA	NA	NA
WP_023548378.1\|925716_927447_+	phospho-sugar mutase	A0A1X9I671	Streptococcus_phage	1.0e-175	54.2
WP_023548380.1\|927554_928430_+	RNase adapter RapZ	A0A0R8VB27	Thermobifida_phage	1.2e-07	28.8
WP_023548382.1\|928431_929400_+	YvcK family protein	A1IMD5	Streptococcus_phage	6.7e-68	43.3
WP_003722604.1\|929407_930379_+	DNA-binding protein WhiA	Q7AWZ3	Streptococcus_phage	5.2e-52	39.4

DBSCAN-SWA_4

1072745 : 1112902

Listeria_phage(91.07%)

terminase,integrase,tail,holin

attL 1080848:1080863|attR 1086036:1086051

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003739618.1\|1072745_1073093_+	helix-turn-helix transcriptional regulator	A0A0A7RTK4	Clostridium_phage	9.9e-06	40.7
WP_003733969.1\|1073147_1073624_-	competence protein ComK	NA	NA	NA	NA
WP_009911646.1\|1073614_1074973_-	recombinase family protein	Q8LTD8	Listeria_phage	2.0e-251	97.1
WP_023548440.1\|1075036_1075642_-	hypothetical protein	NA	NA	NA	NA
WP_023548442.1\|1075656_1075875_-	zinc-ribbon domain-containing protein	A0A059T6E3	Listeria_phage	4.6e-33	97.2
WP_012951966.1\|1075897_1076389_-	hypothetical protein	A8ATX4	Listeria_phage	2.9e-91	99.4
WP_042228539.1\|1076419_1076713_-	helix-turn-helix transcriptional regulator	A8ATX5	Listeria_phage	7.3e-26	63.9
WP_023548446.1\|1076884_1077112_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_023548448.1\|1077115_1077289_+	hypothetical protein	NA	NA	NA	NA
WP_023548450.1\|1077311_1077578_-	hypothetical protein	NA	NA	NA	NA
WP_003733687.1\|1077642_1077837_+	hypothetical protein	A0A059T6E5	Listeria_phage	1.4e-25	95.3
WP_003769996.1\|1077848_1078133_+	hypothetical protein	A0A0B5D168	Listeria_phage	1.6e-46	98.9
WP_003733634.1\|1078172_1078409_+	hypothetical protein	A0A059T5E9	Listeria_phage	3.3e-37	100.0
WP_023548453.1\|1078405_1078759_+	hypothetical protein	A8ATX8	Listeria_phage	4.0e-47	90.6
WP_023548455.1\|1078736_1079279_-	hypothetical protein	A8ATX9	Listeria_phage	1.0e-94	99.4
WP_015987419.1\|1079342_1080116_+	phage repressor protein/antirepressor Ant	A8ATY0	Listeria_phage	1.1e-140	100.0
WP_023548457.1\|1080235_1080769_+	hypothetical protein	A8ASM7	Listeria_phage	1.6e-79	89.0
WP_023548459.1\|1080765_1080981_+	hypothetical protein	Q9T176	Listeria_phage	9.7e-28	93.0
1080848:1080863	attL	NA	NA	NA	NA
WP_003722564.1\|1081089_1081278_+	hypothetical protein	Q9T175	Listeria_phage	1.8e-22	82.3
WP_042227938.1\|1081495_1081699_+	hypothetical protein	NA	NA	NA	NA
WP_023548462.1\|1081695_1082577_+	hypothetical protein	A0A2P1JTZ5	Anoxybacillus_phage	4.2e-85	57.6
WP_023548463.1\|1082530_1083340_+	PD-(D/E)XK nuclease-like domain-containing protein	A0A290GJV0	Caldibacillus_phage	4.6e-78	54.3
WP_023548464.1\|1083359_1084277_+	hypothetical protein	I1W658	Staphylococcus_phage	5.1e-17	38.7
WP_023548467.1\|1084273_1084987_+	SAM-dependent DNA methyltransferase	A8ATD5	Listeria_phage	7.2e-128	96.6
WP_023548469.1\|1084997_1085942_+\|integrase	site-specific integrase	A8ATD6	Listeria_phage	1.7e-177	98.4
WP_023548471.1\|1085954_1086635_+	hypothetical protein	A8ATD7	Listeria_phage	3.3e-122	97.8
1086036:1086051	attR	NA	NA	NA	NA
WP_023548473.1\|1086631_1086811_+	hypothetical protein	A0A059T5G0	Listeria_phage	6.0e-23	93.2
WP_023548475.1\|1086807_1087176_+	hypothetical protein	Q8W5X1	Listeria_phage	1.1e-55	87.7
WP_023548477.1\|1087172_1087697_+	hypothetical protein	A8ASP1	Listeria_phage	1.1e-35	52.8
WP_023548479.1\|1087693_1088155_+	hypothetical protein	D9J0I6	Brochothrix_phage	1.3e-16	33.8
WP_023548481.1\|1088151_1088319_+	hypothetical protein	NA	NA	NA	NA
WP_187646229.1\|1088345_1088504_+	hypothetical protein	A0A059T654	Listeria_phage	1.1e-23	96.2
WP_023548485.1\|1088503_1088833_+	hypothetical protein	A8ATZ5	Listeria_phage	1.3e-07	93.1
WP_023548487.1\|1088825_1089053_+	DUF3850 domain-containing protein	A0A059T7N3	Listeria_phage	8.6e-35	97.3
WP_023548489.1\|1089066_1089414_+	hypothetical protein	A0A059T8V4	Listeria_phage	2.1e-56	87.8
WP_023548492.1\|1089429_1090014_+	DUF3310 domain-containing protein	A0A059T5J6	Listeria_phage	5.3e-76	75.3
WP_023548494.1\|1090010_1090493_+	single-stranded DNA-binding protein	A8ATZ7	Listeria_phage	8.2e-67	82.5
WP_003734994.1\|1090511_1090703_+	hypothetical protein	A8ASP6	Listeria_phage	8.0e-26	100.0
WP_042227941.1\|1090647_1091052_+	DUF1064 domain-containing protein	A8ASP7	Listeria_phage	1.4e-64	94.8
WP_023548496.1\|1091055_1091439_+	DUF2481 family protein	A8ASP8	Listeria_phage	4.4e-63	96.1
WP_010990210.1\|1091579_1092014_+	hypothetical protein	A8AU03	Listeria_phage	2.6e-72	94.4
WP_023548498.1\|1092299_1092527_+	hypothetical protein	A0A0B5CTV3	Listeria_phage	1.6e-33	97.3
WP_023548500.1\|1092566_1093352_+	hypothetical protein	A8ATU5	Listeria_phage	1.2e-128	96.3
WP_023548502.1\|1093281_1094610_+\|terminase	PBSX family phage terminase large subunit	A8ATU6	Listeria_phage	2.0e-232	87.3
WP_023548504.1\|1094624_1096181_+	hypothetical protein	A0A0B5D0A6	Listeria_phage	1.9e-298	98.3
WP_023548506.1\|1096185_1097229_+	hypothetical protein	A0A0B5D111	Listeria_phage	3.7e-197	97.7
WP_023548507.1\|1097324_1097879_+	hypothetical protein	A8ATU9	Listeria_phage	3.9e-89	99.5
WP_003725068.1\|1097901_1098774_+	hypothetical protein	A0A0B5CTX8	Listeria_phage	4.5e-164	99.7
WP_003725067.1\|1098787_1098943_+	hypothetical protein	A0A0B5CYK6	Listeria_phage	1.0e-18	98.0
WP_003723785.1\|1098943_1099297_+	hypothetical protein	A8ATV2	Listeria_phage	8.4e-61	99.1
WP_023548509.1\|1099296_1099662_+	hypothetical protein	A8ATV3	Listeria_phage	3.5e-62	95.0
WP_023548511.1\|1099651_1099969_+	HK97 gp10 family phage protein	A8ATV4	Listeria_phage	2.7e-50	97.1
WP_010991155.1\|1099965_1100337_+	hypothetical protein	A0A0B5CTY4	Listeria_phage	5.5e-63	99.2
WP_010991154.1\|1100341_1101028_+	Ig domain-containing protein	A8ATV6	Listeria_phage	9.5e-109	93.0
WP_023548513.1\|1101077_1101509_+	hypothetical protein	A8ATV7	Listeria_phage	2.2e-71	96.5
WP_072218650.1\|1101505_1101817_+	hypothetical protein	A0A0B5D116	Listeria_phage	1.2e-42	98.9
WP_023548515.1\|1101821_1106612_+\|tail	phage tail tape measure protein	A8ATV9	Listeria_phage	0.0e+00	96.6
WP_023548517.1\|1106608_1108177_+\|tail	phage tail family protein	A8ATW0	Listeria_phage	1.9e-301	98.7
WP_023548519.1\|1108189_1110352_+\|tail	phage tail protein	A8ATW1	Listeria_phage	0.0e+00	98.9
WP_003733957.1\|1110402_1110708_+	hypothetical protein	A0A059T5E6	Listeria_phage	1.8e-43	100.0
WP_014929558.1\|1110707_1110989_+\|holin	phage holin	A8ATW3	Listeria_phage	6.7e-45	98.9
WP_023548522.1\|1110988_1111840_+	M15 family metallopeptidase	A0A059T7Y8	Listeria_phage	5.8e-140	93.3
WP_023548524.1\|1112103_1112271_+	hypothetical protein	NA	NA	NA	NA
WP_003725136.1\|1112668_1112902_+	hypothetical protein	A8ATC5	Listeria_phage	1.2e-34	92.2

DBSCAN-SWA_5

1630309 : 1638595

Synechococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003729814.1\|1630309_1631602_+	adenylosuccinate lyase	A0A1B3B081	Gordonia_phage	2.5e-17	33.0
WP_014931516.1\|1631682_1632396_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A0E3F9V5	Synechococcus_phage	8.8e-41	37.8
WP_003722248.1\|1632407_1632653_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA
WP_003733240.1\|1632656_1633340_+	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA
WP_014602076.1\|1633332_1635552_+	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	1.3e-159	41.2
WP_023548708.1\|1635536_1636964_+	amidophosphoribosyltransferase	A0A1B1ISH6	uncultured_Mediterranean_phage	8.1e-54	31.9
WP_012951771.1\|1636982_1638032_+	phosphoribosylformylglycinamidine cyclo-ligase	Q58MH8	Prochlorococcus_phage	4.6e-62	43.5
WP_003722243.1\|1638028_1638595_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	7.0e-25	35.9

DBSCAN-SWA_6

2127835 : 2189021

Streptococcus_phage(16.67%)

tRNA,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003732816.1\|2127835_2129542_-\|tRNA	proline--tRNA ligase	NA	NA	NA	NA
WP_003723454.1\|2129581_2130844_-\|protease	RIP metalloprotease RseP	NA	NA	NA	NA
WP_023548872.1\|2130857_2132000_-	1-deoxy-D-xylulose-5-phosphate reductoisomerase	NA	NA	NA	NA
WP_003727496.1\|2132014_2132803_-	phosphatidate cytidylyltransferase	NA	NA	NA	NA
WP_042228215.1\|2132816_2133575_-	isoprenyl transferase	R9W0U9	Flavobacterium_phage	1.7e-21	41.4
WP_003723450.1\|2133804_2134362_-	ribosome recycling factor	NA	NA	NA	NA
WP_003723449.1\|2134361_2135090_-	UMP kinase	NA	NA	NA	NA
WP_003723448.1\|2135382_2135757_+	hypothetical protein	NA	NA	NA	NA
WP_010989732.1\|2135734_2136940_+	helicase SNF2	L0P6E9	Lactobacillus_phage	4.9e-92	47.1
WP_003723446.1\|2136929_2138234_+	DUF3440 domain-containing protein	A0A220GKF8	Streptococcus_phage	9.5e-134	52.1
WP_003723445.1\|2138243_2138750_+	ParB-like nuclease domain-containing protein	A0A220GKT8	Streptococcus_phage	4.0e-56	66.7
WP_014600798.1\|2138771_2139503_+	methyltransferase domain-containing protein	A0A1X9I6N4	Streptococcus_phage	4.4e-80	58.7
WP_003723443.1\|2139521_2140364_+	DUF2785 domain-containing protein	NA	NA	NA	NA
WP_003723442.1\|2140414_2140654_-	YneF family protein	NA	NA	NA	NA
WP_003732809.1\|2140874_2142869_-	transketolase	NA	NA	NA	NA
WP_003723440.1\|2143015_2143243_-	DUF896 domain-containing protein	NA	NA	NA	NA
WP_003723439.1\|2143334_2143664_-	cell division suppressor protein YneA	NA	NA	NA	NA
WP_003723438.1\|2143820_2144435_+	transcriptional repressor LexA	A0A1B2APZ1	Phage_Wrath	9.3e-15	62.1
WP_023548876.1\|2144465_2144987_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_023548878.1\|2145030_2146326_-	arsenic transporter	A0A2H4PQU3	Staphylococcus_phage	3.1e-145	61.6
WP_003723435.1\|2146469_2147804_-	type I glutamate--ammonia ligase	A0A1V0SJ53	Klosneuvirus	2.0e-06	26.4
WP_003719570.1\|2147874_2148243_-	MerR family transcriptional regulator	NA	NA	NA	NA
WP_014601965.1\|2148446_2149673_-	methionine gamma-lyase family protein	NA	NA	NA	NA
WP_003733804.1\|2149665_2150889_-	GTPase HflX	NA	NA	NA	NA
WP_003719566.1\|2150999_2151233_-	RNA chaperone Hfq	NA	NA	NA	NA
WP_012951578.1\|2151355_2152273_-\|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	NA	NA	NA	NA
WP_023548880.1\|2152398_2154075_-	glycerol-3-phosphate dehydrogenase/oxidase	NA	NA	NA	NA
WP_009925395.1\|2154306_2155005_-	glycerophosphodiester phosphodiesterase	A0A0S2MYI4	Enterococcus_phage	9.9e-13	32.4
WP_012951576.1\|2155217_2157086_+	peptidoglycan O-acetyltransferase OatA	B5WZU0	Pseudomonas_phage	6.5e-43	31.9
WP_012951575.1\|2157119_2158916_-	class 1 internalin InlK	NA	NA	NA	NA
WP_012951574.1\|2159247_2160981_-	LapB repeat-containing protein	NA	NA	NA	NA
WP_009913867.1\|2161307_2161775_-	S-ribosylhomocysteine lyase	NA	NA	NA	NA
WP_023548882.1\|2161857_2164317_-	DNA topoisomerase IV subunit A	G3M9Z5	Bacillus_virus	4.7e-102	31.6
WP_003723731.1\|2164313_2166281_-	DNA topoisomerase IV subunit B	G3M9Z3	Bacillus_virus	6.7e-123	42.5
WP_003732802.1\|2166461_2166869_-	CoA-binding protein	NA	NA	NA	NA
WP_003724132.1\|2167026_2167623_+	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA
WP_009932949.1\|2167664_2168537_-	aldose 1-epimerase family protein	NA	NA	NA	NA
WP_003724130.1\|2168539_2168851_-	hypothetical protein	NA	NA	NA	NA
WP_012951573.1\|2168873_2169293_-	acyl-CoA thioesterase	NA	NA	NA	NA
WP_003726695.1\|2169395_2170175_-	GTP-sensing pleiotropic transcriptional regulator CodY	NA	NA	NA	NA
WP_012581410.1\|2170195_2171605_-\|protease	ATP-dependent protease ATPase subunit HslU	W6AS21	Erwinia_phage	5.8e-44	28.8
WP_003724001.1\|2171618_2172158_-\|protease	ATP-dependent protease subunit HslV	NA	NA	NA	NA
WP_023548885.1\|2172178_2173081_-	tyrosine recombinase XerC	A0A097EYL9	Mycobacterium_phage	1.2e-13	28.6
WP_009924616.1\|2173363_2174668_-\|tRNA	FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO	NA	NA	NA	NA
WP_014600791.1\|2174730_2176809_-	type I DNA topoisomerase	A0A1V0SB35	Catovirus	4.1e-107	37.5
WP_003723892.1\|2177080_2177941_-	DNA-protecting protein DprA	NA	NA	NA	NA
WP_023548886.1\|2178074_2178860_-	ribonuclease HII	G4YAY0	Emiliania_huxleyi_virus	3.0e-26	39.2
WP_003723890.1\|2178856_2179720_-	ribosome biogenesis GTPase YlqF	NA	NA	NA	NA
WP_003723889.1\|2179729_2180272_-	type I signal peptidase SipZ	NA	NA	NA	NA
WP_003723888.1\|2180373_2180943_-	type I signal peptidase SipY	NA	NA	NA	NA
WP_003723887.1\|2180977_2181544_-	type I signal peptidase SipX	NA	NA	NA	NA
WP_023548888.1\|2181662_2182922_-\|protease	ATP-dependent protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	1.8e-145	63.2
WP_003723884.1\|2183106_2184390_-	trigger factor	NA	NA	NA	NA
WP_003732796.1\|2184504_2185443_-	hypothetical protein	NA	NA	NA	NA
WP_003732795.1\|2185704_2186370_-	hypothetical protein	NA	NA	NA	NA
WP_010989719.1\|2186387_2186921_-\|protease	matrixin family metalloprotease	NA	NA	NA	NA
WP_003727524.1\|2187039_2187255_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_003723563.1\|2187405_2187801_+	helix-turn-helix transcriptional regulator	A9D9J6	Lactobacillus_prophage	1.3e-14	57.4
WP_003732792.1\|2187881_2189021_+\|protease	PrsW family intramembrane metalloprotease	NA	NA	NA	NA

DBSCAN-SWA_7

2202370 : 2250924

Listeria_phage(90.57%)

terminase,integrase,holin,protease,capsid,portal,tail

attL 2207882:2207898|attR 2251025:2251041

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010989717.1\|2202370_2203783_-	ATP-dependent RNA helicase DbpA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	8.3e-51	31.8
WP_003723543.1\|2203906_2204167_+	hypothetical protein	NA	NA	NA	NA
WP_009924169.1\|2204198_2204798_-	histidine phosphatase family protein	A0A1X9IGJ2	Lactococcus_phage	5.8e-30	41.0
WP_009914084.1\|2204962_2205370_+	glyoxalase/bleomycin resistance/extradiol dioxygenase family protein	NA	NA	NA	NA
WP_023548894.1\|2205523_2206117_+	YdeI/OmpD-associated family protein	NA	NA	NA	NA
WP_023548896.1\|2206157_2207516_-	DUF1254 domain-containing protein	M1HNU9	Paramecium_bursaria_Chlorella_virus	2.6e-09	21.9
2207882:2207898	attL	NA	NA	NA	NA
WP_023548899.1\|2208163_2208397_-	hypothetical protein	A0A059T6F9	Listeria_phage	1.4e-35	97.4
WP_023548901.1\|2208837_2209047_+	hypothetical protein	A0A059T7Z0	Listeria_phage	4.7e-27	95.7
WP_012951927.1\|2209553_2209982_+	transcriptional regulator	A8ATJ2	Listeria_phage	3.9e-28	87.3
WP_023548907.1\|2209993_2210491_+	AP2 domain-containing protein	A8ATW6	Listeria_phage	4.6e-81	89.1
WP_023548908.1\|2210558_2210966_-	protein-export chaperone SecB	NA	NA	NA	NA
WP_023548909.1\|2210992_2211448_-	hypothetical protein	NA	NA	NA	NA
WP_023548910.1\|2211479_2212016_-	hypothetical protein	NA	NA	NA	NA
WP_042228558.1\|2212474_2213161_-	M15 family metallopeptidase	A8ATW4	Listeria_phage	3.8e-126	96.2
WP_023548912.1\|2213160_2213427_-\|holin	phage holin	A0A059T684	Listeria_phage	1.0e-39	96.6
WP_009928179.1\|2213447_2213864_-	hypothetical protein	A0A059T5F5	Listeria_phage	9.3e-43	99.3
WP_009928178.1\|2213842_2214286_-	hypothetical protein	A0A059T6F6	Listeria_phage	6.8e-76	100.0
WP_009928177.1\|2214333_2215428_-	hypothetical protein	A0A059T7R4	Listeria_phage	1.8e-202	99.2
WP_023548913.1\|2215417_2217712_-\|tail	phage tail protein	A0A059T7Y6	Listeria_phage	0.0e+00	98.7
WP_023548914.1\|2217724_2219374_-\|tail	phage tail family protein	A0A059T682	Listeria_phage	6.1e-312	97.3
WP_023548916.1\|2219361_2224287_-\|tail	phage tail tape measure protein	A0A059T5F4	Listeria_phage	0.0e+00	93.8
WP_003731639.1\|2224301_2224451_-	hypothetical protein	A0A059T6F4	Listeria_phage	6.7e-20	98.0
WP_023548918.1\|2224501_2224834_-	hypothetical protein	A8ATA5	Listeria_phage	4.3e-51	97.3
WP_023548920.1\|2224905_2225493_-\|tail	phage tail protein	A8ATA4	Listeria_phage	1.5e-107	99.5
WP_012581456.1\|2225514_2225898_-	hypothetical protein	A8ATA3	Listeria_phage	3.8e-67	100.0
WP_003731643.1\|2225894_2226296_-	hypothetical protein	A8ATA2	Listeria_phage	2.1e-68	100.0
WP_003731644.1\|2226292_2226658_-	hypothetical protein	A8ATA1	Listeria_phage	1.3e-64	100.0
WP_003731645.1\|2226641_2226941_-	hypothetical protein	A8ATA0	Listeria_phage	5.3e-48	100.0
WP_023548922.1\|2226950_2227121_-	hypothetical protein	A8AT99	Listeria_phage	6.9e-21	94.6
WP_009917704.1\|2227127_2228279_-\|capsid	phage major capsid protein	A8AT98	Listeria_phage	7.2e-202	93.2
WP_023548924.1\|2228305_2229103_-\|protease	Clp protease ClpP	A0A059T5F2	Listeria_phage	1.2e-136	95.1
WP_023548926.1\|2229099_2230230_-\|portal	phage portal protein	A8AT96	Listeria_phage	1.7e-203	93.1
WP_023548928.1\|2230241_2231885_-\|terminase	terminase large subunit	A0A059T7Q8	Listeria_phage	0.0e+00	98.0
WP_012951543.1\|2231881_2232238_-\|terminase	P27 family phage terminase small subunit	A0A059T7Y1	Listeria_phage	2.0e-46	98.0
WP_009917710.1\|2232287_2232602_-	HNH endonuclease	A8ATF8	Listeria_phage	1.7e-57	100.0
WP_023548932.1\|2232601_2232928_-	hypothetical protein	A0A059T5G5	Listeria_phage	3.2e-54	97.2
WP_023548935.1\|2233466_2233892_-	DUF722 domain-containing protein	Q8W5V4	Listeria_phage	7.7e-69	92.9
WP_023548937.1\|2233892_2234423_-	DUF3310 domain-containing protein	A0A059T7T5	Listeria_phage	9.6e-93	94.3
WP_023548939.1\|2234921_2236727_-	hypothetical protein	A8ATS2	Listeria_phage	1.4e-127	40.5
WP_023548941.1\|2236729_2238418_-	hypothetical protein	A8ATS1	Listeria_phage	1.8e-124	43.1
WP_023548943.1\|2238485_2239121_-	hypothetical protein	NA	NA	NA	NA
WP_023548945.1\|2239123_2239894_-	DUF1351 domain-containing protein	B6D7K2	Listeria_phage	1.1e-17	27.8
WP_023548947.1\|2239890_2240124_-	hypothetical protein	NA	NA	NA	NA
WP_023548949.1\|2240139_2240751_-	hypothetical protein	B6D7K1	Listeria_phage	2.0e-49	49.0
WP_023548951.1\|2240747_2240948_-	hypothetical protein	A0A059T6A2	Listeria_phage	1.0e-10	54.8
WP_009933642.1\|2240944_2241118_-	hypothetical protein	A0A059T5G3	Listeria_phage	5.2e-24	100.0
WP_023548953.1\|2241150_2241585_-	hypothetical protein	A8ATS7	Listeria_phage	2.5e-38	52.8
WP_023548955.1\|2241581_2241749_-	hypothetical protein	A0A059T654	Listeria_phage	4.7e-22	94.1
WP_023548957.1\|2241885_2242476_-	pentapeptide repeat-containing protein	M4H0V1	Listeria_phage	1.6e-35	82.7
WP_023548959.1\|2242534_2242723_-	hypothetical protein	NA	NA	NA	NA
WP_023548961.1\|2242715_2243291_-	DUF1642 domain-containing protein	Q8W5X2	Listeria_phage	1.0e-31	42.9
WP_009928035.1\|2243287_2243968_-	hypothetical protein	A8ATD7	Listeria_phage	1.1e-120	96.5
WP_023548963.1\|2243980_2244925_-\|integrase	site-specific integrase	A8ATD6	Listeria_phage	2.7e-178	99.0
WP_023548965.1\|2244935_2245649_-	SAM-dependent DNA methyltransferase	A8ATD5	Listeria_phage	5.4e-131	98.3
WP_009929542.1\|2245785_2245938_-	hypothetical protein	A8ATD4	Listeria_phage	1.5e-19	100.0
WP_023548967.1\|2246172_2246358_-	hypothetical protein	A0A059T7Z3	Listeria_phage	4.4e-29	98.4
WP_009929538.1\|2246360_2246603_-	hypothetical protein	A8ATD2	Listeria_phage	7.0e-43	98.8
WP_023548969.1\|2246891_2247662_-	phage antirepressor KilAC domain-containing protein	A0A1Q1PVU2	Staphylococcus_phage	5.0e-66	49.4
WP_023548970.1\|2247675_2247852_-	helix-turn-helix transcriptional regulator	D2IZW2	Enterococcus_phage	1.1e-05	46.6
WP_023548971.1\|2248124_2248448_+	helix-turn-helix transcriptional regulator	A0A059T6G1	Listeria_phage	1.2e-34	66.4
WP_023548973.1\|2248464_2248917_+	ImmA/IrrE family metallo-endopeptidase	A0A059T7S0	Listeria_phage	7.7e-83	96.7
WP_012951517.1\|2248968_2249625_+	DUF4352 domain-containing protein	NA	NA	NA	NA
WP_023548975.1\|2249769_2250924_+\|integrase	site-specific integrase	A8ATC7	Listeria_phage	1.3e-211	96.6
2251025:2251041	attR	NA	NA	NA	NA

DBSCAN-SWA_8

2374200 : 2381623

Hokovirus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_020246560.1\|2374200_2375757_-	glutamine-hydrolyzing GMP synthase	A0A1V0SH76	Hokovirus	2.3e-17	28.1
WP_003732712.1\|2375885_2376290_-	PTS sugar transporter subunit IIB	NA	NA	NA	NA
WP_023549061.1\|2376350_2376659_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
WP_003727000.1\|2376671_2377496_-	ammonia-dependent NAD(+) synthetase	G3MA24	Bacillus_virus	9.7e-68	52.6
WP_003721509.1\|2377507_2378998_-	nicotinate phosphoribosyltransferase	G3MA18	Bacillus_virus	9.5e-114	49.7
WP_023549062.1\|2379206_2380220_-	glycosyltransferase	A0A1V0SAH6	Catovirus	7.9e-11	32.0
WP_003732709.1\|2380234_2381218_-	glycosyltransferase family 2 protein	A0A1V0SAH6	Catovirus	4.1e-12	34.6
WP_003721506.1\|2381239_2381623_-	glycerol-3-phosphate cytidylyltransferase	A0A1V0SGE7	Hokovirus	1.4e-16	40.7

Anti-CRISPR protein detection

Acr_ID: NC_021837.1|WP_023548448.1|1077115_1077289_+|hypothetical-protein

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Acr_ID: NC_021837.1|WP_023548450.1|1077311_1077578_-|hypothetical-protein

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Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NC_021837.1|WP_023548448.1|1077115_1077289_+|hypothetical-protein

1077115_1077289_+

57 aa aa

HTH_XRE

Identity	Hit_domain_coverage
0.44642857142857145	0.9655172413793104

1072745-1112902

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NC_021837_1	Orphan	1.8\|10755\|35\|NC_021837\|CRT	10755-10789	35	1108217-1108251	1

1. spacer 1.8|10755|35|NC_021837|CRT matches to NC_021837 position: 1108217-1108251, mismatch: 1

gaaattgtaaaatctatatccgttgattcaacaaa	CRISPR spacer
gaaattgtaaaatctgtatccgttgattcaacaaa	Protospacer
***************.*******************

NC_021837.1|WP_023548450.1|1077311_1077578_-|hypothetical-protein

1077311_1077578_-

88 aa aa

HTH_XRE

Identity	Hit_domain_coverage
0.44642857142857145	0.9655172413793104

1072745-1112902

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NC_021837_1	Orphan	1.8\|10755\|35\|NC_021837\|CRT	10755-10789	35	1108217-1108251	1

1. spacer 1.8|10755|35|NC_021837|CRT matches to NC_021837 position: 1108217-1108251, mismatch: 1

gaaattgtaaaatctatatccgttgattcaacaaa	CRISPR spacer
gaaattgtaaaatctgtatccgttgattcaacaaa	Protospacer
***************.*******************

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NC_021837

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

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