CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NC_021718	Alteromonas mediterranea UM7 plasmid unnamed, complete sequence	0 crisprs	WYL	0	0	0	0
NC_021713	Alteromonas mediterranea UM7, complete sequence	2 crisprs	cas3,DEDDh,WYL,csa3,Cas9_archaeal,PD-DExK,RT,DinG,PrimPol	0	0	5	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NC_021713_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_021713_1

1714412-1714513

Orphan

Consensus_repeat	Method
AATCCAGCGTGTCTACCAATTCCACCACTTCCGCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_021713_1

>merge|NC_021713|1|1714412-1714513|CRISPRCasFinder
AATCCAGCGTGTCTACCAATTCCACCACTTCCGCGTAGACGCTAGCTATAATAGTCATTCAAAAAAGAATCCAGCGTGTCTACCAATTCCACCACTTCCGCG

>NC_021713|1|1|1714412-1714513|CRISPRCasFinder
AATCCAGCGTGTCTACCAATTCCACCACTTCCGCG	TAGACGCTAGCTATAATAGTCATTCAAAAAAG
AATCCAGCGTGTCTACCAATTCCACCACTTCCGCG

Protein	Signature genes	Signature genes Name	Protein_function
NC_021713.1\|WP_015066817.1\|1717093_1717675_-\|aminoacyl-tRNA-hydrolase	unknown	unknown	gnl\|CDD\|235457
NC_021713.1\|WP_012517996.1\|1719741_1720197_-\|hypothetical-protein	unknown	unknown	unknown
NC_021713.1\|WP_015066812.1\|1710143_1710701_-\|acyl-CoA-thioesterase	unknown	unknown	gnl\|CDD\|224523
NC_021713.1\|WP_015066816.1\|1714796_1715834_-\|peptidylprolyl-isomerase	unknown	unknown	gnl\|CDD\|365914
NC_021713.1\|WP_015066814.1\|1711459_1712116_+\|transcription-negative-regulator	unknown	unknown	gnl\|CDD\|380437
NC_021713.1\|WP_012517994.1\|1717680_1718313_-\|50S-ribosomal-protein-L25/general-stress-protein-Ctc	unknown	unknown	gnl\|CDD\|235534
NC_021713.1\|WP_012517922.1\|1706659_1706830_+\|hypothetical-protein	unknown	unknown	unknown
NC_021713.1\|WP_012517921.1\|1706287_1706470_-\|hypothetical-protein	unknown	unknown	unknown
NC_021713.1\|WP_015066818.1\|1718625_1719627_-\|NAD(P)-dependent-alcohol-dehydrogenase	unknown	unknown	gnl\|CDD\|176186
NC_021713.1\|WP_015066820.1\|1722377_1723283_-\|4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol-kinase	unknown	unknown	gnl\|CDD\|234731
NC_021713.1\|WP_015066819.1\|1720865_1721171_+\|hypothetical-protein	unknown	unknown	unknown
NC_021713.1\|WP_015066821.1\|1723282_1723909_-\|outer-membrane-lipoprotein-LolB	unknown	unknown	gnl\|CDD\|319984
NC_021713.1\|WP_015066813.1\|1710788_1711409_+\|flavin-reductase-family-protein	unknown	unknown	gnl\|CDD\|224766
NC_021713.1\|WP_015066808.1\|1704360_1704843_+\|hypothetical-protein	unknown	unknown	unknown
NC_021713.1\|WP_012517998.1\|1721287_1722235_-\|ribose-phosphate-pyrophosphokinase	unknown	unknown	gnl\|CDD\|234929
NC_021713.1\|WP_015066809.1\|1704921_1705512_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NC_021713.1\|WP_015066815.1\|1712242_1713649_-\|alanine:cation-symporter-family-protein	unknown	unknown	gnl\|CDD\|376500
NC_021713.1\|WP_015066811.1\|1707414_1709976_+\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|238657
NC_021713.1\|WP_012517991.1\|1715959_1717051_-\|redox-regulated-ATPase-YchF	unknown	unknown	gnl\|CDD\|236583
NC_021713.1\|WP_015066810.1\|1705664_1706216_+\|carboxymuconolactone-decarboxylase-family-protein	unknown	unknown	gnl\|CDD\|225039

Protein	Function_ID	Function_description	E-value
NC_021713.1\|WP_015066812.1\|1710143_1710701_-\|acyl-CoA-thioesterase	gnl\|CDD\|224523	COG1607, COG1607, Acyl-CoA hydrolase [Lipid metabolism].	2.15061e-48
NC_021713.1\|WP_015066816.1\|1714796_1715834_-\|peptidylprolyl-isomerase	gnl\|CDD\|365914	pfam00160, Pro_isomerase, Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD. The peptidyl-prolyl cis-trans isomerases, also known as cyclophilins, share this domain of about 109 amino acids. Cyclophilins have been found in all organisms studied so far and catalyze peptidyl-prolyl isomerisation during which the peptide bond preceding proline (the peptidyl-prolyl bond) is stabilized in the cis conformation. Mammalian cyclophilin A (CypA) is a major cellular target for the immunosuppressive drug cyclosporin A (CsA). Other roles for cyclophilins may include chaperone and cell signalling function.	4.46544e-32
NC_021713.1\|WP_015066814.1\|1711459_1712116_+\|transcription-negative-regulator	gnl\|CDD\|380437	cd20303, cupin_ChrR_1, Marinobacter hydrocarbonoclasticus anti-ECFsigma factor ChrR, and similar proteins; 2 heterologous tandem repeats of cupin domain. This family contains bacterial anti-sigma factor such as ChrR from Marinobacter hydrocarbonoclasticus. Anti-sigma factor ChrR is a member of the ZAS (Zn2+ anti-sigma) subfamily of group IV anti-sigmas. It inhibits transcriptional activity by binding to the ECF sigma factor E (sigmaE), an essential factor to mount a transcriptional response to a singlet oxygen and for viability when carotenoids are limiting. This protein family likely contains two distinct homologous functional domains belonging to the cupin superfamily with a conserved "jelly roll-like" beta-barrel fold.	1.7337e-51
NC_021713.1\|WP_012517994.1\|1717680_1718313_-\|50S-ribosomal-protein-L25/general-stress-protein-Ctc	gnl\|CDD\|235534	PRK05618, PRK05618, 50S ribosomal protein L25/general stress protein Ctc; Reviewed.	4.82599e-83
NC_021713.1\|WP_015066818.1\|1718625_1719627_-\|NAD(P)-dependent-alcohol-dehydrogenase	gnl\|CDD\|176186	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines.	2.32484e-175
NC_021713.1\|WP_015066820.1\|1722377_1723283_-\|4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol-kinase	gnl\|CDD\|234731	PRK00343, ipk, 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional.	7.83321e-167
NC_021713.1\|WP_015066821.1\|1723282_1723909_-\|outer-membrane-lipoprotein-LolB	gnl\|CDD\|319984	cd16326, LolB, LolB, an outer membrane lipoprotein receptor. This family contains the outer membrane lipoprotein receptor, LolB, which catalyzes the last step of lipoprotein transfer from the inner to the outer membrane. There are five Lol proteins (LolA, LolB, LolC, LolD, and LolE) involved in the sorting and membrane localization of lipoprotein and are highly conserved in Gram-negative bacteria. LolA transports lipoproteins through the periplasm to LolB, which then localizes them to outer membranes; the protruding loop of LolB has been shown to be essential for the localization of lipoproteins in the anchoring of bacterial triacylated proteins to the outer membrane.	1.14873e-39
NC_021713.1\|WP_015066813.1\|1710788_1711409_+\|flavin-reductase-family-protein	gnl\|CDD\|224766	COG1853, COG1853, Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family [General function prediction only].	9.45833e-38
NC_021713.1\|WP_012517998.1\|1721287_1722235_-\|ribose-phosphate-pyrophosphokinase	gnl\|CDD\|234929	PRK01259, PRK01259, ribose-phosphate diphosphokinase.	0
NC_021713.1\|WP_015066809.1\|1704921_1705512_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	6.9504e-12
NC_021713.1\|WP_015066815.1\|1712242_1713649_-\|alanine:cation-symporter-family-protein	gnl\|CDD\|376500	pfam01235, Na_Ala_symp, Sodium:alanine symporter family.	0
NC_021713.1\|WP_015066817.1\|1717093_1717675_-\|aminoacyl-tRNA-hydrolase	gnl\|CDD\|235457	PRK05426, PRK05426, peptidyl-tRNA hydrolase; Provisional.	9.77046e-96
NC_021713.1\|WP_015066811.1\|1707414_1709976_+\|TonB-dependent-receptor	gnl\|CDD\|238657	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.	1.08665e-61
NC_021713.1\|WP_012517991.1\|1715959_1717051_-\|redox-regulated-ATPase-YchF	gnl\|CDD\|236583	PRK09601, PRK09601, redox-regulated ATPase YchF.	0
NC_021713.1\|WP_015066810.1\|1705664_1706216_+\|carboxymuconolactone-decarboxylase-family-protein	gnl\|CDD\|225039	COG2128, COG2128, Uncharacterized conserved protein [Function unknown].	1.33766e-12

>NC_021713.1|WP_015066815.1|1712242_1713649_-|alanine:cation-symporter-family-protein
MINEFVSLVNNILWGDGQVLIIMLLACGIWFTVKLGGVQLRHFGHMFSLLKGSTTSSKDGISSFQALCTSLSARVGTGNLAGVAVAISLGGSGAIFWMWMIALLGMATGFAESVLGQLYKVRDENGEFRGGPAYYIKQGLNKTWLAVAFSLCLFFGYGFVFSAVQANTITDALNNAYAFPTEYVGLAIIALAALIVVGGLKSIARFAEFVVPFMGIGYVLVALVITFINISELPAMLLDIIKSAFGLQEAGAGALGAAIKNGIQRGLYSNEAGSGSVPHAAASAVPNPNHPVSQGYIQMLGVFLDTLILCTSTAFIILLAGGSSSDQMEGIRLTQDAMSSHLGEGGTDFVAAAISLFAFTSVVANYAYGESNLHMFKLDNKIGRAAYTIGYLGMIYWGAQAALPQVWAMADMALGLMTVINIIAIVWMTPTIVSISKDYFKKKDSGQKVEYKVGDCEIQGKSEKGIWD
>NC_021713.1|WP_015066814.1|1711459_1712116_+|transcription-negative-regulator
MLNMNFDERLAINTQKQEWQPSPSSTVWRKPLEREAKESGHTTSVVRYEPGASFKEHGHPYGEEIFVLEGVFSDEHGDYPAGTYLRNPPGSKHSPFSKEGCVILVKLNQFDKRDLSEVRVNTKTAEWLQGQGGLQVMPLHNFEHEHVALVKWPVGEVFKPHRHFGGEEIFVLSGTFKDEHGEYPKGSWIRNPHMSQHHPYVDEETVIWVKTGHLPVAL
>NC_021713.1|WP_015066813.1|1710788_1711409_+|flavin-reductase-family-protein
MSHTHFYQPKNGHGLAHDPFNAIIAPRPIGWISTRSKDGVLNLAPYSFFNALNYTPPIIGFSVVGSKKDSLINVQETGEFCWNLVSEDLVNAMNTTSKPLAPEESEFDHAELQTVDSEIVQVPRVKDSKVSMECKLTDVVQLKSASGDDVNSWFIMGEVVGVHIDKSLIENGVYSTLKSAPVSRGGGKGDYYTISQENFFEMLRPE
>NC_021713.1|WP_015066812.1|1710143_1710701_-|acyl-CoA-thioesterase
MTARSVAFSRTRLTELMVPSFANFGGKVHGGVILSLMDKVAYACASKHAGAYCVTVTVDGVEFLQPVEVGDLLHLDATVHYVGNTSLVVGIKVTTENIKTNEVKHTNNSFFTMVAKDDSGTPVSVPELELTNHHEMRNFVTAIRRSKIRKEAQVKLQRDYDAFIPKEDFALVDAHRCVLTFDRDS
>NC_021713.1|WP_015066811.1|1707414_1709976_+|TonB-dependent-receptor
MQQAKINASVFKLSLIASAIAGISFSSASFAQEQTAIDEQDVEQIQIVGSRRVGRTVNDSPVPIDIIDASSIEATGLTETNMILNQLLPSFNFPQPSVTDGTDHVRPAQLRGLAPDHTLVLVNGKRRHTSALLNLNGSVGRGSSAVDLNAIPANAIKRIEVLRDGAAAQYGSDAIAGVINIVLKDAAEGGEVSATYGANVTTMDGVPNLENVAIDANGDLAFTEGSDREVTDGQTFTLRGNVGFEWGDDGFVNVSGEYRDRGQANRADYDQRENYARDAEGNLDPRELTVNRYNHVYGNGEVEDYALFINAGKALTDSVEFYTTAGYSTRDSLGSGFYRRAQDSRNIVEIYPDGFLPAIQTDITDMSLIAGIKGYGDVWNYDLSVTHGGNELEYGVVNTLNTSLGPTSQTEFDAGTLEYDTTIINADASRLVDTGLFYSEMNFAMGAEYRHEGYDITAGEENSYIQGTFGPGGAVTDPVDGPFGAAGSQVFPGFTPESAGDNSRHNYSFYVDLEADVVENWNVAVAGRYEDYSDFGSTFNWKMSHRVTLSDAFALRASVSTGFRAPSLQQQFFTSIATVFVDGEPTETGTFAPSSDVAQALGSPGLDAEESDNYSAGFTYSPTADFNLTVDFYRIDIDDRIVLSNNLSGEAIEALLEGTGANQARFFLNAIDSRTEGVDIVSTYTLNTADYGAFNFNAGANFNDNEVTSVIDAPEVLQNAGFDQDNLFSDVELRRFETSSPDSKLNLGVTWNYDRYTTTLRTTRYGEVEDPSSIEARNEILPSEWITDLDVRIALTEGLTVSVGANNVFDVYPEPTRDLVDDVTTFSRLFSYSGFSPYGFTGRFVYGKVAYRF
>NC_021713.1|WP_012517922.1|1706659_1706830_+|hypothetical-protein
MSEKNNKKKKKNSQMIIRINDEERAQFIELCEALDTSAAREVRRFIREFIEKHDGL
>NC_021713.1|WP_012517921.1|1706287_1706470_-|hypothetical-protein
MIDTQSFAHLSCLIEGIALVKHSENRSSQDLKTLLESQGYDAAIAANTAEALSEQLQLAS
>NC_021713.1|WP_015066810.1|1705664_1706216_+|carboxymuconolactone-decarboxylase-family-protein
MSDFTLHTKDTAPEAAKPLIDNSVSAFGMLPNLHAVMAEAPTLLEGYQVLHKLAQETSFSADELTVVWQSINVEHACHYCVPAHTGIAKSMNVSDTLIEELRNDEVLSDSKLNTLKETVLAVTRGRGNVEETQLKAFYDAGYAHKQLLEIILVLAQKVMSNYTNHLAETPVDEPFKKFEWSPK
>NC_021713.1|WP_015066809.1|1704921_1705512_-|TetR/AcrR-family-transcriptional-regulator
MKYDHDEIIEKATTLFWQRGFQAAGMRDIQQALDMRPGSIYARFQSKEGLFKLVVERYAENSAKRLKQVKEAESPLNALYCFFETALTVPNEQRYMRQCLLVKSIAELDIIGDVAKKAVLDSMQTLKAGFSDIIEACIENGELPAHTPTTLAADWLQNQFVGLRAFALMQDENKATIQMIDKVMIDLKGQWPQKTR
>NC_021713.1|WP_015066808.1|1704360_1704843_+|hypothetical-protein
MTVQFSQGFSNQCPLVSLKGYSLYYIWQGHPFDEGEKNFYQLKSTPDPEKVEVMSACWDGYAGSYQLNAEGRLILTQFYYFLPDGLGESDALLEELHGDFYLEFRTHFEGDQLYVPFVDGNVIIEQEQWVEIKRTRVDSKANNNNLFAWLKRVIPSRMFD
>NC_021713.1|WP_015066816.1|1714796_1715834_-|peptidylprolyl-isomerase
MHFKRHKNMSKHAHHTTSLGQNLFCSTVYGAITALYLLTNTALAGKEDNESQVLTTQISSNVKEKIPSVSDNSTKQDNAILHSNSASWYQVPKSNTVTFATAYGDVVIALHPALAPKHVARFKKLIDAGFYNEQAFYRVVEGFVAQAGSNDTHDVSQFDSGLLSTIDAEFTQPLNSNVHVVETNDMFAPSTGFLDGFPVGIDSTRAEMWGLHCPGVVAFARNSEKDTASTEFYIVLGQAPRHLDRNMSVVGRVVKGMELLQKLPRGNRQSGGVLDNITQKSKIKQAFVHSDKATPYFVQMPLHEEYKKRTNTGKNLDNPFFHDNTYGPRPIDLCYYQTKTDTKAW
>NC_021713.1|WP_012517991.1|1715959_1717051_-|redox-regulated-ATPase-YchF
MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPVPDLRLDKLAEIVNPQRVIPTTMEFVDIAGLVEGASKGEGLGNKFLANIRETDAIGHVVRCFDDENIVHVAGRVSPKDDIDVINTELALSDLETTEKALHRVAKRAKGGDADAKYEMKVLEKIKPHLDEGLLLRSLELSKEELEAISYMNMLTLKPTMYIANVNEDGFENNPYLDQVKEIAAGENATVVAVCASIESDIAELEDDEREEFMQDMGLEEPGLNRVIRSGYNLLTLQTYFTAGVKEVRAWTFPEGSTAPQAAGKIHTDFEKGFIRAEIVSYDHFVEFNGEQGAKDAGKWRLEGKDYIVKDGDVIHFRFNV
>NC_021713.1|WP_015066817.1|1717093_1717675_-|aminoacyl-tRNA-hydrolase
MADIRLIVGLGNPGPEYENTRHNAGEWFLNQLADTYNAPLKPETKFFGKTARITIAGKDIRLLYPTTFMNKSGQAVAALANFYRIEPEQILVAFDELDLPPGVAKYKVGGSSSQNGVRDIVARMGNNKNFLRLRIGIGHPGHKSRVTGHVLGKPSAEEKTAIESAIDEAVRCTEILLKEDLKQAQNRLHSHKV
>NC_021713.1|WP_012517994.1|1717680_1718313_-|50S-ribosomal-protein-L25/general-stress-protein-Ctc
MSEAIFNLDASVRTDLGKGASRRLRREDKLPGIIYGGEEAPVSITLDHNKVNNSADFEAFYSHVLTLNLDGKPVEVLVKDMQRHPYKPKIMHIDFQRVIAGEDVHTNVPLHFVNEEKSAAVKAGGIAEHHVTEIEVTCQPKDLPEFIEVDMAAVEMGQTVHLSDLTLPAGVSSVELAKNDEAHDLAVVTVKPAPKAAETDEDGEEAASEE
>NC_021713.1|WP_015066818.1|1718625_1719627_-|NAD(P)-dependent-alcohol-dehydrogenase
MINAYAAKEAGGKLEKFEYDPGELGAHDVEIDVESCGICHSDLSMLDNEWGITEFPFVPGHEVVGTVSKIGDHVTSLKVGQRVGLGWHASYCNSCRTCEAGDHNLCAGATMTIGGRHGGFADKVRAQARAVIPLPESIDSTKAGPLFCGGITVFNPLVQFNISPTSEVGVVGIGGLGHLALQFLNAWGCKVVAFTSSESKEKEALSLGASETINSRDEDEIKKAQGRFDLIISTVNVKLDWNLYLSTLAPKGRLHFVGATLEPLDIGAFNLIGGQKSVSGSPVGSPATIKTMLDFAAHHDIEPVTETFKFEDVNKAIDRLREGKAHYRIVLTR
>NC_021713.1|WP_012517996.1|1719741_1720197_-|hypothetical-protein
MKTNRLNLVLILTSMTLLGACAEEEKKENLAMTDKKEQIQQNSEDLPKELVAEPVTQAEAVEADAKGEVTMKGSIFYKDLEGGFYAFIAENGDRYTLHGLDETYQKNGLIVEVKGTPKPDLMTFTQFGTVLQVTSVKVLDTSKVIDSLPTK
>NC_021713.1|WP_015066819.1|1720865_1721171_+|hypothetical-protein
MKHLSKILAVSSLALAASACDVNKTEEGEMPDVDVDAGEMPEYEVKKTEEGELPEADIDGGELPEYEVDTMDVDVDTETKEVEVPVVDVEMPEEDDDDSGN
>NC_021713.1|WP_012517998.1|1721287_1722235_-|ribose-phosphate-pyrophosphokinase
MPDMKLFAGNAVPELAQKVADRLYTKLGNAKVGRFSDGEISVEIHENVRGSDVFIIQSTCAPTNDNLMELIVMIDALRRASAGRITAVIPYFGYARQDRRVRSARVPITAKVVADFLSNVGVDRVLTIDLHAEQIQGFFDVPVDNAFGTPILLADMVRRDFADPVVVSPDIGGVVRARATAKLLNDTDLAIIDKRRPKANVAQVMNIIGDVKDRDCIIVDDMIDTGGTLAKAAEALKAHGARRVYAYATHAIFSGNAANNLKESVIDEIIVTDSIPLSADMKQIGKVKQLTLSEMLAETIRRISNEESISAMFEY
>NC_021713.1|WP_015066820.1|1722377_1723283_-|4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol-kinase
MNSSETNQKDWWPSPAKLNLFLHILGRYDNGYHQLQSLFQMLDYGDELAFDVTCSAASGTDKERTEGNAPTIRMNIPLKGVPDDDNLIIKAARLLAQKTQCNKGAVISLNKRLPMGGGIGGGSSNAATTLVALNHLWQTGLSEDELSALGLTLGADVPIFVRGLTAFAAGVGEQITPAPQQEHYFLVATPNVHISTADVFTSPDLPRNTPAIRWEDYEFEKTRNDCQQLVVNRYPEVAKLLQWLVHYAPSRMTGTGASVFATFSDYTLAEQVRAKMPDTWQSFVAKGVNRSPLLDKLEQQR
>NC_021713.1|WP_015066821.1|1723282_1723909_-|outer-membrane-lipoprotein-LolB
MIRLFSILYTLCFVLSACTTAPKGPENAVNLTAQLEKVADVHQWQMRGKIAFRQGKEAASLNLVWKNDSGDFDFRLTNFLGVSLVSLNVSDKGSTLEADGETYVDALPEPLIYQITGMVIPVKPLLSWVKGLPIEGDKFTLTEKGLVDTLESDCKTCQNWKVSYGNYGSVKMANGDAVWLPHSISLTQDAASSTAHTQLKIKIYQWNL

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Crispr_ID: NC_021713_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_021713_2

3801754-3801892

Orphan

Consensus_repeat	Method
AATGGTTTCAGGTGGTACCGTATCGCTATGGCTGCCAGGAAAAACTG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_021713_2

>merge|NC_021713|2|3801754-3801892|CRISPRCasFinder
AATGGTTTCAGGTGGTACCGTATCGCTATGGCTGCCAGGAAAAACTGGTTCACACTACCATCGGCGCTAATACGTTTCACTTCTGAGTTCGGAATGGATTCAGGTGGTACCGTATCGCTATGGCTGCCAGGAAAAACTG

>NC_021713|2|2|3801754-3801892|CRISPRCasFinder
AATGGTTTCAGGTGGTACCGTATCGCTATGGCTGCCAGGAAAAACTG	GTTCACACTACCATCGGCGCTAATACGTTTCACTTCTGAGTTCGG
AATGGATTCAGGTGGTACCGTATCGCTATGGCTGCCAGGAAAAACTG

Protein	Signature genes	Signature genes Name	Protein_function
NC_021713.1\|WP_015068072.1\|3807573_3808038_+\|RNA-binding-protein	unknown	unknown	gnl\|CDD\|240845
NC_021713.1\|WP_015068076.1\|3814488_3814794_-\|hypothetical-protein	unknown	unknown	unknown
NC_021713.1\|WP_015068074.1\|3809598_3810696_+\|tRNA-(uridine(54)-C5)-methyltransferase-TrmA	unknown	unknown	gnl\|CDD\|235332
NC_021713.1\|WP_015068066.1\|3792580_3792946_+\|response-regulator	unknown	unknown	gnl\|CDD\|381124
NC_021713.1\|WP_015068077.1\|3814908_3815496_+\|uracil-DNA-glycosylase	unknown	unknown	gnl\|CDD\|381683
NC_021713.1\|WP_012519744.1\|3794905_3795937_-\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293811
NC_021713.1\|WP_051025795.1\|3817973_3818765_+\|TIGR03899-family-protein	unknown	unknown	gnl\|CDD\|274842
NC_021713.1\|WP_015068068.1\|3793526_3794837_+\|GHKL-domain-containing-protein	unknown	unknown	gnl\|CDD\|226654
NC_021713.1\|WP_012519752.1\|3811680_3812808_+\|acyl-CoA-desaturase	unknown	unknown	gnl\|CDD\|224316
NC_021713.1\|WP_015068063.1\|3787604_3790199_+\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|366183
NC_021713.1\|WP_015068065.1\|3791158_3792334_+\|histidinol-phosphate-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|223157
NC_021713.1\|WP_015068069.1\|3796182_3798555_+\|DNA-polymerase-II	unknown	unknown	gnl\|CDD\|235595
NC_021713.1\|WP_012519751.1\|3810745_3811339_-\|HTH-type-transcriptional-repressor-FabR	unknown	unknown	gnl\|CDD\|236881
NC_021713.1\|WP_015068070.1\|3798809_3799388_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|320009
NC_021713.1\|WP_012519756.1\|3815492_3817718_-\|EAL-domain-containing-protein	unknown	unknown	gnl\|CDD\|238923
NC_021713.1\|WP_041702849.1\|3813012_3814434_+\|Si-specific-NAD(P)(+)-transhydrogenase	unknown	unknown	gnl\|CDD\|235373
NC_021713.1\|WP_015068071.1\|3799741_3801481_+\|AMP-binding-protein	unknown	unknown	gnl\|CDD\|236236
NC_021713.1\|WP_015068073.1\|3808109_3809435_-\|DUF5610-domain-containg-protein	unknown	unknown	gnl\|CDD\|375859
NC_021713.1\|WP_015068067.1\|3792942_3793527_+\|chemotaxis-protein-CheC	unknown	unknown	gnl\|CDD\|381738
NC_021713.1\|WP_015068064.1\|3790313_3791135_+\|sulfite-exporter-TauE/SafE-family-protein	unknown	unknown	gnl\|CDD\|376667

Protein	Function_ID	Function_description	E-value
NC_021713.1\|WP_015068072.1\|3807573_3808038_+\|RNA-binding-protein	gnl\|CDD\|240845	cd12399, RRM_HP0827_like, RNA recognition motif in Helicobacter pylori HP0827 protein and similar proteins. This subfamily corresponds to the RRM of H. pylori HP0827, a putative ssDNA-binding protein 12rnp2 precursor, containing one RNA recognition motif (RRM), also termed RBD (RNA binding domain) or RNP (ribonucleoprotein domain). The ssDNA binding may be important in activation of HP0827. .	5.06626e-27
NC_021713.1\|WP_015068074.1\|3809598_3810696_+\|tRNA-(uridine(54)-C5)-methyltransferase-TrmA	gnl\|CDD\|235332	PRK05031, PRK05031, tRNA (uracil-5-)-methyltransferase; Validated.	0
NC_021713.1\|WP_015068066.1\|3792580_3792946_+\|response-regulator	gnl\|CDD\|381124	cd17593, REC_CheC-like, phosphoacceptor receiver (REC) domain of uncharacterized response regulators containing a CheC domain. This subfamily is composed of uncharacterized proteins containing an N-terminal REC domain and a C-terminal CheC domain that may function as the output/effector domain of a response regulator. CheC is a CheY-P phosphatase, affecting the level of phosphorylated CheY which controls the sense of flagella rotation and determine swimming behavior of chemotactic bacteria. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	1.78351e-44
NC_021713.1\|WP_015068077.1\|3814908_3815496_+\|uracil-DNA-glycosylase	gnl\|CDD\|381683	cd10033, UDG_like, uncharacterized family of the uracil-DNA glycosylase superfamily. Uracil-DNA glycosylases (UDGs) initiate repair of uracils in DNA. Uracil may arise from mis-incorporation of dUMP residues by DNA polymerase or via deamination of cytosine. Uracil in DNA mispaired with guanine is one of the major pro-mutagenic events, causing G:C->A:T mutations; thus, UDG is an essential enzyme for maintaining the integrity of genetic information. UDGs have been classified into various families on the basis of their substrate specificity, conserved motifs, and structural similarities. Although these families demonstrate different substrate specificities, often the function of one enzyme can be complemented by the other. UDG family 1 is the most efficient uracil-DNA glycosylase (UDG, also known as UNG) and shows a specificity for uracil in DNA. UDG family 2 includes thymine DNA glycosylase which removes uracil and thymine from G:U and G:T mismatches, and mismatch-specific uracil DNA glycosylase (MUG) which in Escherichia coli is highly specific to G:U mismatches but also repairs G:T mismatches at high enzyme concentration. UDG family 3 includes Human SMUG1 which can remove uracil and its oxidized pyrimidine derivatives from, single-stranded DNA and double-stranded DNA with a preference for single-stranded DNA. Pedobacter heparinus SMUG2, which is UDG family 3 SMUG1-like, displays catalytic activities towards DNA containing uracil or hypoxanthine/xanthine. UDG family 4 includes Thermotoga maritima TTUDGA, a robust UDG which like family 1, acts on double-stranded and single-stranded uracil-containing DNA. UDG family 5 (UDGb) includes Thermus thermophilus HB8 TTUDGB which acts on double-stranded uracil-containing DNA; it is a hypoxanthine DNA glycosylase acting on double-stranded hypoxanthine-containing DNA except for the C/I base pair, as well as a xanthine DNA glycosylase which acts on both double-stranded and single-stranded xanthine-containing DNA. UDG family 6 hypoxanthine-DNA glycosylase lacks any detectable UDG activity; it excises hypoxanthine. Other UDG families include one represented by Bradyrhizobium diazoefficiens Blr0248 which prefers single-stranded DNA and removes uracil, 5-hydroxymethyl-uracil or xanthine from it.	5.10505e-89
NC_021713.1\|WP_012519744.1\|3794905_3795937_-\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293811	cd07725, TTHA1429-like_MBL-fold, uncharacterized Thermus thermophilus TTHA1429 and related proteins; MBL-fold metallo hydrolase domain. Includes the MBL-fold metallo hydrolase domain of uncharacterized Thermus thermophilus TTHA1429 and related proteins. Members of this subgroup belong to the MBL-fold metallo-hydrolase superfamily which is comprised mainly of hydrolytic enzymes which carry out a variety of biological functions.	8.12291e-40
NC_021713.1\|WP_051025795.1\|3817973_3818765_+\|TIGR03899-family-protein	gnl\|CDD\|274842	TIGR03899, hypothetical_protein, TIGR03899 family protein. Members of this protein family are conserved hypothetical proteins with a limited species distribution within the Gammaproteobacteria. It is common in the genera Vibrio and Shewanella, and in this resembles the C-terminal domain and putative protein sorting motif TIGR03501. This model, but design, does not extend to all homologs,but rather represents a particular clade.	8.76685e-126
NC_021713.1\|WP_015068068.1\|3793526_3794837_+\|GHKL-domain-containing-protein	gnl\|CDD\|226654	COG4191, COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system [Signal transduction mechanisms].	1.89811e-40
NC_021713.1\|WP_012519752.1\|3811680_3812808_+\|acyl-CoA-desaturase	gnl\|CDD\|224316	COG1398, OLE1, Fatty-acid desaturase [Lipid metabolism].	3.95319e-88
NC_021713.1\|WP_015068063.1\|3787604_3790199_+\|TonB-dependent-receptor	gnl\|CDD\|366183	pfam00593, TonB_dep_Rec, TonB dependent receptor. This model now only covers the conserved part of the barrel structure.	4.25391e-23
NC_021713.1\|WP_015068065.1\|3791158_3792334_+\|histidinol-phosphate-aminotransferase-family-protein	gnl\|CDD\|223157	COG0079, HisC, Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism].	2.61693e-73
NC_021713.1\|WP_015068069.1\|3796182_3798555_+\|DNA-polymerase-II	gnl\|CDD\|235595	PRK05762, PRK05762, DNA polymerase II; Reviewed.	0
NC_021713.1\|WP_012519751.1\|3810745_3811339_-\|HTH-type-transcriptional-repressor-FabR	gnl\|CDD\|236881	PRK11202, PRK11202, HTH-type transcriptional repressor FabR.	1.02921e-113
NC_021713.1\|WP_015068070.1\|3798809_3799388_+\|hypothetical-protein	gnl\|CDD\|320009	cd00252, EFh_SPARC_EC, EF-hand, extracellular calcium-binding (EC) motif, found in secreted protein acidic and rich in cysteine (SPARC)-like proteins. The SPARC protein family represents a diverse group of proteins that share a follistatin-like (FS) domain and an extracellular calcium-binding (EC) domain with two EF-hand motifs. It includes SPARC (for secreted protein acidic and rich in cysteine, also termed osteonectin/ON, or basement-membrane protein 40/BM-40), SPARC-like protein 1 (for secreted protein, acidic and rich in cysteines-like 1/ SPARCL1, also termed high endothelial venule protein/Hevi, or MAST 9, or SC-1, or RAGS-1, or QR1, or ECM 2), testicans 1, 2, and 3 (also termed SPARC/osteonectin, CWCV, and Kazal-like domains proteoglycans, or SPOCK), secreted modular calcium-binding protein SMOC-1 (also termed SPARC-related modular calcium-binding protein 1) and SMOC-2 (also termed SPARC-related modular calcium-binding protein 2, or smooth muscle-associated protein 2/SMAP-2), follistatin-related protein 1 (FRP-1, also termed follistatin-like protein 1/fstl-1, TSC-36/Flik, TGF-beta inducible protein). The SPARC proteins have been implicated in modulating cell interaction with the extracellular milieu, including regulation of extracellular matrix assembly and deposition, counter-adhesion, effects on extracellular protease activity, and modulation of growth factor/cytokine signaling pathways, as well as in development and disease.	0.00116259
NC_021713.1\|WP_012519756.1\|3815492_3817718_-\|EAL-domain-containing-protein	gnl\|CDD\|238923	cd01948, EAL, EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second messenger, cyclic di-GMP, and is a good candidate for a diguanylate phosphodiesterase function. Together with the GGDEF domain, EAL might be involved in regulating cell surface adhesiveness in bacteria.	2.64517e-101
NC_021713.1\|WP_041702849.1\|3813012_3814434_+\|Si-specific-NAD(P)(+)-transhydrogenase	gnl\|CDD\|235373	PRK05249, PRK05249, Si-specific NAD(P)(+) transhydrogenase.	0
NC_021713.1\|WP_015068071.1\|3799741_3801481_+\|AMP-binding-protein	gnl\|CDD\|236236	PRK08315, PRK08315, AMP-binding domain protein; Validated.	0
NC_021713.1\|WP_015068073.1\|3808109_3809435_-\|DUF5610-domain-containg-protein	gnl\|CDD\|375859	pfam18433, DUF5610, Domain of unknown function (DUF5610). This is a domain of unknown function found in bacterial proteins.	1.02887e-26
NC_021713.1\|WP_015068067.1\|3792942_3793527_+\|chemotaxis-protein-CheC	gnl\|CDD\|381738	cd17910, CheC_ClassII, chemotaxis protein CheC, Class II. This family contains class II CheC proteins found in proteobacteria, which diverge from class I CheCs in sequence conservation and lack critical well-conserved residues for CheD binding. These proteins are likely to be dedicated phosphatases. The class II cheC genes are not found in chemotaxis operons, but in operons containing more archetypical two-component signaling components, non-signaling operons, or as orphans. Thus, class II CheCs appear to be involved in non-chemotactic two component systems. Class II CheCs lack the first of the two phosphatase active sites of class I CheCs, and retain the second active site of class I CheCs.	2.14307e-45
NC_021713.1\|WP_015068064.1\|3790313_3791135_+\|sulfite-exporter-TauE/SafE-family-protein	gnl\|CDD\|376667	pfam01925, TauE, Sulfite exporter TauE/SafE. This is a family of integral membrane proteins where the alignment appears to contain two duplicated modules of three transmembrane helices. The proteins are involved in the transport of anions across the cytoplasmic membrane during taurine metabolism as an exporter of sulfoacetate. This family used to be known as DUF81.	1.03363e-23

>NC_021713.1|WP_015068071.1|3799741_3801481_+|AMP-binding-protein
MMESDSLPNTSFPLSKSEFIGPKNAELTSLTIGQYFKRVVDNYADHPAIVVRHQNINWTYKEYWLQIERVACGLLANGVEPGDRVGIWSPNNIEWSIVQMATARIGAIMVCLNPAYRPDELAFAINNVQVKYLVMAQSFKQSNYVAMLKELAPEIEDDRNDSLAQPLSLSMLPSLKFIYTIGNQPVDRLLPFSALQREPTESLRIKLTEIEAELSADDNINIQFTSGTTGNPKGATLTHRNILNNGLLVAQAMRFTHKDKLCIPVPLYHCFGMVLGNLVCLASGACAVFPGESFAPETTLRTVEEEKCTALHGVPTMFIAELELPNFKEFDLSTLRTGVMAGSTCPEELMRKVHSEFNMTEVVIGYGQTECSPINHITDIDSPFEKQVKTVGRAMPHTEVKIIDAKGNTLPIGEPGEICAKGYCVMKGYWGDEAKTKATIDDEGWLHSGDLGEMDDEGYVTIVGRIKDMIIRGGENIYPREIEEVLYQHNDVSDAAVFGIPDDRYGEQVCLWIKAKENRHIDEEKIREYLKSKLAYFKVPKYINVVQDYPMTVTGKLQKFKMREHMIETLKKQALKTEA
>NC_021713.1|WP_015068070.1|3798809_3799388_+|hypothetical-protein
MKIIKLSMITGAVVAATLSTSAFAGHHEEKITMGFNALDKDSNGYIVGSESSGAIDSKLVSKMDTDGDSMVSRTEFNTFVDEKPSMFSDEIITQVQTEGTNDAALTEKGNPELFSKADNEMISEKNKELRTEMSATANAKFTEIDMDSDGKISETELDVADVEGDFESMDEDGDSYITRMEYRTYFEEIESE
>NC_021713.1|WP_015068069.1|3796182_3798555_+|DNA-polymerase-II
MQASSIQQGFILNKGTFTLRGKVYVELWVKTPTGTVRLISAPQAPTCFVALEHVEALQSIAQRVPATLDIKNDGFNTLEQKQVATVKTATESHMHQLRQLAREANIVLYEADIRVADRYLMERFVYGAVEFIGPNAGADSSPTTVIENAQIRPCHFRTRFSSLSIDIECDEHEMLFSIALAGEGVNLVLLVCPPTFEKRGVEQRNDKPYQLLVLNSEKELLHAFFHHVTSYDPDIILGWNVKQFDMAVLARRAKANKLKFTLGRHEREASVRQWEDQTLVDVPGRCVIDGIEALKTMTYQFESFSLDNVSEALLGENKLIQETDKLAAIKRLYHEDPIALADYNYKDTELVNRIQEQTQFIDFLALRSILTGLDMTRPGGSVAAFLNVYLPKLHRKSYIAGVRPENGGLASPGGYVMRSQPGLYKDVLVLDFKSLYPSIIRTFKIDPMGLAEGLKSPKHAIEGFKGAVFSRTSHFLPTIIENLWLQRDEAKKQKDAPRSQAIKILMNSFYGVLGSGGCPFYDPRLASSITLRGHEIMQTTAGWIEELGYTVIYGDTDSTFVHVEGNGTLGTPTETGIKLAQIINEKWSALLKDRYDIACHLEIEFESHFSTFFMPTIRGSTEGSKKRYAGMKDGQLTFKGLENVRSDWTTLAKTFQYELYERVFTGQPVESYISDMLNAVKAGELDDDLVYKKRLRKPLSSYIKSLPPHVKAARRADEHFKEQGLPLRYQTNTTIAYVITVQGPQTVETAFAPLDYDHYIEKQIKPIAESILPLISLNFEQIANDQLTLF
>NC_021713.1|WP_012519744.1|3794905_3795937_-|MBL-fold-metallo-hydrolase
MEYLYEKQVEPGKLIEIAEGVLWLTMPLPFELDHINLYLIRGDGGWVVVDTGIGTTTTKSLWQRIFEQLDGPIVGVIVTHLHPDHVGLAGWIADTFKVPFYMTQTEYFTARAFAAGRNGATNERDVLYYQRAGLDEVMIEKLTATEGNGYSSVVSPLPISYTRLKDQMELALGDNQWKVMIGRGHSPEHACLYSEQKNILISGDHILPIITPNIGAYSTEPDANTLDDYLNTLPKFKSLPKDATVLPAHKLPFIGLHERVDTLLAHHHDHLNALVNACEQPQTAVNLLPVLFKRKLSSRNMVFAVAECLSHLNYLLNQGVISRSVNSKGQFEFKANQTKQLAS
>NC_021713.1|WP_015068068.1|3793526_3794837_+|GHKL-domain-containing-protein
MFEQLVGKLPVGIGIVDEQFNVVYLNDFFLDRLPHDLRDCYKDTPVTDLFQGQAKFLKRRLKSVFVLQHPSFSYWEQRPHIFPFKSSRPITGEETQMYQNMEILPIKDKNSGQKLACIFLQDVTAQASYFRAQQKLSEALKKEHEAQRKLIRKLDTAQSQLIQAEKMASTGQLAAGIAHEINNPVGFVNANLNTLGQYASHLISICDGVYAQLEQFNDELKEQIDAIFQSNHYDLLKEDITELIEESTDGLTRVKDIVENLKNFSLENTEGVQTVDVCTICNQLITLISAQYSAPHYKFECEHEKVEVMGNPGPLKQALMNVMINAAQAIETKGFVKLSVIEKGDSVVIKILDSGCGIPVKHRKRLFEPFFTTKPEGQGQGLGLSVAYTAIEQHQGKISISSKENKGTVVEITIPKQLSCLENESIDSELDSPLTP
>NC_021713.1|WP_015068067.1|3792942_3793527_+|chemotaxis-protein-CheC
MSIVLPLDEEQRDALQELLNISMGQAANSLAQLIETKIDISIPKISAVTPTQLYGLLFETEGAFYTRQSFLGDVHGEVMSVLSQAGLTEVATLMDYEDPLSEEDIQEIILELCNILAGACLAGLSEQLELTTNLNMPTLFQPDKSNFDDLKWQHSLVMEVQFVIAISSFSMRVVFCLDDESLARMKNTLDELLA
>NC_021713.1|WP_015068066.1|3792580_3792946_+|response-regulator
MSLSVLVADDSKLSRRSVIRALPEDLEYNIVEATNGQEAIDALTESNFALVLLDLTMPEVDGVGVLEFLHEKTDAPNVIVISADFQPEKQKIVLSLGAKRFLRKPLDKEELAMTLFELGYL
>NC_021713.1|WP_015068065.1|3791158_3792334_+|histidinol-phosphate-aminotransferase-family-protein
MSYNRSRRLFIGGSVAASAIGASGLSNLVSAQSVEAAASQPSVIYGPKPGVAKLNANENPFGPSPAALEAIATASAQGGAYYAYPAAMTLLDMIAERHGITRKHISLSAGSSPILSYAAVAASKNGKILGPDLFWDTTSKAPEKQGAPEIMRIANTAELDIDLDAMYAAIDDSIGMVHICNPNNPTGKVLDPNKLRDFCIKASKKTLVLVDEAYNELIDEPPKHTMIPLVKAGHNVIVARTFSKIYGLAGMRVGYLIASEENTEWINRYGMGGYTLNQAGLAAAIASYNDDAFLTFSKEKIYEGKAMVMDAVKANGLTALPSSTNFIFVNLGDGNAEYFRQAMAEKDVLIRGIYRTYDNWSRVSMGKIADVKRYVDAMPAALDKMYKMQNT
>NC_021713.1|WP_015068064.1|3790313_3791135_+|sulfite-exporter-TauE/SafE-family-protein
MELELLWFVVTLCITGAIAGITAGLFGNGGGFVVVPALLAVFPFFTPPSEALVKVAIGTSLASIVVSSARSVMAHRAKGAVDFDILRSWSIWLILGVGGGLLIANNSSASGLTVVFAAGVLLYSVYFLFPEFVVRPGLVFNMPKGIGKAVLAFVLGGFSALLGIGGGTPTVITMVMCQRTIQQAVATAAGVGFLIGLPGAIGFLFMKHPDTASLPVGTIGYINIPALVAISIGAIFTAPIGAKMAHNFSEKKLKRLFGIYLVIVSSAMFYKAI
>NC_021713.1|WP_015068063.1|3787604_3790199_+|TonB-dependent-receptor
MKQKKLHTAVRYALTGLTLFTTSMLAQAQEVTEETAEAKDLERIAVVGARGAPRSVTSSPVPVDVLTAEDVEAVAFTDMNNVLMTLVPSYSVGRQPISDGGTFIRPATLRGMPTDKTLVLVNSKRRHRAALVSIGGSGTQGPDIATIPTAAIKTVEVLRDGAAAQYGSDAIAGVINFQLKDNTEGGSFTADYGTYYEGDGDQITVTGNKGFALGDDGFLSISAEYSDSEATFRGEQYCEPWFCVDEQSEQYIADATAMANSVHGSDVVQPWGQPNTSGTRVFVNAGYALSPEAELYAFGNYSESEGDGSFYYRYPGNGTIEDIRLEDGSIWNPTEFFPGGFTPRFFGDVTDYSFVGGIKGMSGDLTYDISGRYGNNEISYTLANTINPSLGNMSPTSFEPGDLTNEETQIQADFTYDLSEYVLAFGASYLDESYEISEGEEASYFAGPYATSDPYGFCDGTTATAAGLSVIAAGSSLDCSDPDDAVYTVVGVGSNGFPGYSPGYSGSYERDSYAVYTDISGDITDELFAQAALRYEDYSDFGSEVVYKVAGFYQLTDDVGFRSSFGTGFRAPTPGQQGTTNVSTRLPDGFPVATGLFPAGGDVAQALGAEALSPEKSTNFTLGMTANYGDLTLTVDYYNIKLEDRLYSVSTRDVSTTVVTDPDADGYDAYQNYLALSGANVSGAESIGGVFFFQNAFDTVTEGVDVVATYKMESKYGATVLTGSVNYNKTEFDSDPSEYLDAEDQFDFENSRPEMRGVFSVTHSYDVWSAVARLSYFGEYENAGSDDGENATSIQTFGDEFMFDIEGSYLINENLTLSVGVRNLFDNYPDVSTNGDACCGEVYDSGSVVDWQGGYYYTRLAARF
>NC_021713.1|WP_015068072.1|3807573_3808038_+|RNA-binding-protein
MKVGFIQCAVISAIFAIAGYLLFSSASLNVHVPLTVSAALLISGIVTPWLASLIQSPSSSDARAHSNEGSIETLYVGNLPYRANENAVKEYFSSFIEVQSVRLMKDRKTGKRKGYGFIEVVTDDLSSVIDKTNDSIFQERTLKVRPAKDKVDHE
>NC_021713.1|WP_015068073.1|3808109_3809435_-|DUF5610-domain-containg-protein
MNVGQIKAFMGDQKVEQKAEQKATVQPNEVLKKQLQQNGLQQAAEFSKQQAASVSVSSSQTSIGLRVVSSNLNQALEIDGQKPQETKGKALDEESSKLFDFEKVARNVLKFVGGVIRGAADGGASEEKLNGLFSQAREGVSRGFAMAEKDLAGFMNDEIEQGMTKSRDLIDTGINDLETDIFGRQQPNAVSISTLNAVAASEEKSGSLVIRTKDGDEVSFSFESLQSFKASQQLSYQAQISQEQQDSSGELDQQSDTESTAAYSQQTSYQYYERSGISFSLKGELDEGELESIANLVGQVQDLADTFYNGDIEKAYEEALSLGFDDKELVGYALQLNRTTQTEVLKTYENIQHYNEDNSDNAKYGNVVSPVAQYLEKMMDTFANAENKLASSEDYNALIAGLINEMKDVQVPDLISAINRFRSFNQTLLDGLPQSVEASES
>NC_021713.1|WP_015068074.1|3809598_3810696_+|tRNA-(uridine(54)-C5)-methyltransferase-TrmA
MSADEQQRYQAQLDEKVDRLSALLSPFNAPKTSVYPSQPTHYRMRAEFRVWHEGDDLFHIMFDQETKEKYRVDSFPPACKTINDAMEKLLNEVRPNEILRKKLFQIDYLSALSGELVISLLYHRQLDDEWEAAAKSLKSTLETHFPKVNIIGRARKQKRIIDNDFVIERLPVKGNEFVFKNIENSFTQPNAEVNCKMIEWALDCVKPLSGDLLEMYCGAGNFSLPLALHFDNVVGTEIAKPSVQAAQFNIEQNRLHNVKIVRLAAEEFTQAMKGERTFSRLEGIDLSEYNFTTVLVDPPRAGLDEDSLRMIQDYDNIVYISCNPETLAQNLELLSETHDVAQSALFDQFPFTHHIEAGVLLTRKG
>NC_021713.1|WP_012519751.1|3810745_3811339_-|HTH-type-transcriptional-repressor-FabR
MSRQEQKLKTRQNIIHAAFSLLDENRSLSAISLREVAREAGIAPTSFYRHFKDMDELGLTLVDEAGLALRQLMRQARRRIASGGGVIHTSVETFMEFIAANTNVFRLLLREHTGTSSAYRLAVFREIQHFIDELTDYIIEQQGVEYSCAQLQADAMVRLVFSAGAEALEADEKLRKEIGEKVKAQLRFVQVGATQKS
>NC_021713.1|WP_012519752.1|3811680_3812808_+|acyl-CoA-desaturase
MKKPPLILTNALVFIISGAIAFIGVPLWVAYQGIDWAEIGTAIFLFYFTGMSITAGYHRLWSHKTYDANIVVRVILAIGGAMALQNSILHWSSDHRVHHRHVDDNDKDPYSAKKGLWFAHIGWMLREYQAKRYDDYSNCKDLQKDSVVMWQHKYYLPIVLAANFGITGLLGYLNGDVMGMILVAGVLRLVLVHHVTFFINSLAHFWGSQPYTDKNTARDNGVLAFFTFGEGYHNYHHIFEYDYRNGIRWYQFDPTKWLIKGLSYVGLTSNLRKVPEERIEKALAAMQLQRASEKVSVLPNAEEMMHTIQEEYDLLMQRMSEYYATKKRVMRVKQRTLKRSIEGLELAYKYKELKHAFAVQKEKWTHLQSLSLQMA
>NC_021713.1|WP_041702849.1|3813012_3814434_+|Si-specific-NAD(P)(+)-transhydrogenase
MAAKQKQKSPSYHYDAIVIGTGPGGEGVAMQLAKAGKKVAVVERYEAVGGGCTHWGTIPSKALRHSVSRLIEYNSSPLFADNHLSKSLTFSDIMRHASGVVKSQTRLRSSFYDRNRVTLFYGEASFVDAHTLEITREDGSKDTVTAAQIAIATGSRPYCPKDIDFNHPRVYNSDTILSLDHDPKSIIIYGAGVIGSEYASIFRGLGVKVDLVNMRDRLLSFLDDEISDALSYHLWNNGVLIRHNETYSSVETLDDSVILNLESGKRMRADCLLFANGRTGNTDTLKLENVGLKADNRGQLRVNENYQTEIDNIYAVGDVIGYPSLASAAYNQGRFAAEAMLGISTHSALVADIPSGIYTIPEISSVGKTEQELTAAKVPYEVGRAQFKHLARAQIASTQTGSLKILFHRETKEILGIHCFGERASEIVHIGQAIMQQKGEGNTIDYFVNTTFNYPTMAEAYRVAAINGLNRIF
>NC_021713.1|WP_015068076.1|3814488_3814794_-|hypothetical-protein
MRKVVLTLALSAAFGIAHAESGSNQLFDCMDAKTFEMNNQCMSSQIDNNIRFRDAQAKLIDIASESQGDYAIATMTFDQENMHIDIVAHKDSLNALAANRN
>NC_021713.1|WP_015068077.1|3814908_3815496_+|uracil-DNA-glycosylase
MEKKVKGHDELAAEARNCTLCAQYLPHTPNPIFSTAKFAKVLIIGQAPGLKAHESGIAFNDASGDRLRSWLSVSKPTFYNPKLISILPMGFCFPGYKNGADAPPRKECAPTWHQAFLSQIRPELTVYIGRYAQQYYLPEYKNLTDAVYTTFAANAGHVALPHPSGRNNRWLAKNKWFEEESLPMLQHYVSNALQN
>NC_021713.1|WP_012519756.1|3815492_3817718_-|EAL-domain-containing-protein
MSAMDYDNDELIFLDDDGSVEEQVLLGKDWNILIVDDDEEIHTVTRLALSDLVVNDRKLNFIHAYSAKQAKALLHEYSNSIAIILLDVVMETDDAGFDVVKYIREDMKLFEPRIILRTGQPGYAPEEQVIKVYDINDYKTKTELTRAKLLTTIISSLRSYQQIITISQSRAGLEKIITSSANLFEEHSVKEFCEGVVTQISSLIGLDSEGLLCARAGSLLDRDDSEVYVLGAAGEYAKFINHPVADVKNIEIEENVVRCLRLKKHIFEPSCSVLYISRAGFEAAVYVRQTHEISELDKHLLEVFLSSISVGYENVNLFHELRNAAFRDWLTRLPNRNEFINMLDKPHLFAGENCSVALIDVNHFSDVNDGLGQEVGNELLRAISGRFQTSFDGLVKKGRIGADVFGLIGPDELVCPEAINAIFQSSFKVGDHTLPVNVTLGFCKLDNKRNIGIEILKRTNIALNRAKKNLTDNFEYYAKDIEDQTTWRLDMIRRLRSDFAARKLELWFQPQIDLLNEKVVGMEGLLRWPDGDGGYISPAIFVPLAEYSGLIVDIGEWVLEESCRRLQALKEKNYGHLRVAVNISIPQFRDRLFVEKVKHALSNANCDPSRLELEITESVVMDEPQIVIDALRSLKEFGVKIAIDDFGTGFSSMSYLQQLPLDRLKVDRSFVKDIKPGASAVLAETIVTLGNKLGLLTIAEGVEKREQASYMIKLGCDEAQGYLYAKPMPFDALLAFLENHD
>NC_021713.1|WP_051025795.1|3817973_3818765_+|TIGR03899-family-protein
MKADASRQRMLSWFARVGISPSLMSSDPKKQKHALERRKQILETQKASNLQAVLNIALNVTINEQTSDNLDPDWFFAFSTMAEEIYSQPMQELWGKIFAVEVARPGSFSLRTLQLLKTLTHRDAKVFNKAVNIASRRNNDAVPRILVGYHKRKGLLSLFKRPVPEQINLATVGLSYPDLLSLQEMKLIYASEIESGVYAEGQQVTWRCVNENMTLTCKTSDVALVYYKFTSVGSELYKLVTKSPNNAYLQELKAVLGEVFNIS

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1007918 : 1016623

Streptococcus_phage(16.67%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_015066371.1\|1007918_1009211_-	phosphopyruvate hydratase	A0A1X9I5Z8	Streptococcus_phage	2.5e-134	60.0
WP_012517444.1\|1009270_1010902_-	CTP synthase	A0A1J0FA14	Only_Syngen_Nebraska_virus	3.2e-147	50.2
WP_015066372.1\|1011038_1013630_-	DNA mismatch repair protein MutS	A0A1V0SC35	Catovirus	6.4e-33	21.7
WP_012517446.1\|1013790_1014330_+	CinA family protein	B5TK85	Pseudomonas_phage	1.0e-25	45.2
WP_012517447.1\|1014450_1015497_+	recombinase RecA	A0A2D1GPX2	Mycobacterium_phage	2.5e-116	62.8
WP_015066373.1\|1015801_1016623_+	ATP-binding cassette domain-containing protein	A0A2H4PQG7	Staphylococcus_phage	1.4e-26	33.2

DBSCAN-SWA_2

1905054 : 1913353

Alteromonas_phage(28.57%)

integrase

attL 1899622:1899636|attR 1915610:1915624

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1899622:1899636	attL	NA	NA	NA	NA
WP_015066946.1\|1905054_1906260_+\|integrase	site-specific integrase	F1C5A4	Cronobacter_phage	1.8e-70	39.8
WP_015066947.1\|1906242_1906512_-	hypothetical protein	NA	NA	NA	NA
WP_015066948.1\|1906511_1906775_-	hypothetical protein	NA	NA	NA	NA
WP_015066949.1\|1906767_1907355_-	hypothetical protein	A0A1J0GWD6	Alteromonas_phage	6.6e-10	42.4
WP_015066950.1\|1907351_1907852_-	hypothetical protein	NA	NA	NA	NA
WP_015066951.1\|1907851_1908085_-	hypothetical protein	R4VVP5	Alteromonas_phage	6.6e-14	90.5
WP_015066952.1\|1908081_1908858_-	hypothetical protein	NA	NA	NA	NA
WP_015066953.1\|1908854_1909043_-	hypothetical protein	NA	NA	NA	NA
WP_080597428.1\|1909081_1909540_-	hypothetical protein	J7I0T4	Pseudomonas_phage	3.8e-13	65.5
WP_015066955.1\|1910301_1910691_-	hypothetical protein	G8C7U4	Escherichia_phage	4.2e-13	34.1
WP_015066956.1\|1910690_1912436_-	hypothetical protein	A0A2I7RHL2	Vibrio_phage	1.5e-70	38.7
WP_015066957.1\|1912438_1913353_-	RecT protein	A0A2I7RQF1	Vibrio_phage	2.3e-62	43.3
1915610:1915624	attR	NA	NA	NA	NA

DBSCAN-SWA_3

1928724 : 1940053

Vibrio_phage(37.5%)

terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_015066989.1\|1928724_1929294_+	recombination protein ninG	A0A2I7RR86	Vibrio_phage	1.7e-50	53.0
WP_015066990.1\|1929315_1929834_+	hypothetical protein	NA	NA	NA	NA
WP_015066991.1\|1929963_1930182_+	hypothetical protein	NA	NA	NA	NA
WP_015066992.1\|1930327_1930627_+	hypothetical protein	NA	NA	NA	NA
WP_015066993.1\|1930813_1931242_+	hypothetical protein	A0A2I7QM25	Vibrio_phage	8.1e-26	45.3
WP_015066994.1\|1931250_1931484_+	hypothetical protein	NA	NA	NA	NA
WP_015066995.1\|1931480_1931996_+	hypothetical protein	A0A2I7RSZ4	Vibrio_phage	1.1e-13	41.8
WP_015066996.1\|1932067_1932340_+	hypothetical protein	NA	NA	NA	NA
WP_015066997.1\|1932342_1932639_+	hypothetical protein	NA	NA	NA	NA
WP_015066998.1\|1932650_1933205_+\|terminase	terminase small subunit	I6PDJ6	Cronobacter_phage	1.8e-46	57.6
WP_015066999.1\|1933274_1934789_+\|terminase	phage terminase large subunit	A0A2H4J2I1	uncultured_Caudovirales_phage	4.2e-149	53.7
WP_148290653.1\|1934779_1936768_+	hypothetical protein	A0A218MLF5	uncultured_virus	7.6e-34	24.2
WP_015067001.1\|1936764_1937007_+	hypothetical protein	NA	NA	NA	NA
WP_015067002.1\|1937143_1938121_+	hypothetical protein	NA	NA	NA	NA
WP_015067003.1\|1938144_1939077_+	hypothetical protein	F8UBM2	Clostridium_phage	9.4e-27	31.1
WP_015067004.1\|1939144_1939366_+	hypothetical protein	NA	NA	NA	NA
WP_015067005.1\|1939381_1940053_+	hypothetical protein	A0A1B1ITG1	uncultured_Mediterranean_phage	1.4e-35	40.3

DBSCAN-SWA_4

2178741 : 2236051

Acinetobacter_phage(18.18%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_015067135.1\|2178741_2180688_+\|protease	ATP-dependent zinc metalloprotease FtsH	A0A0P0BXI2	Ostreococcus_lucimarinus_virus	2.3e-120	44.4
WP_015067136.1\|2180872_2181697_+	dihydropteroate synthase	NA	NA	NA	NA
WP_015067137.1\|2181706_2183050_+	phosphoglucosamine mutase	NA	NA	NA	NA
WP_015067138.1\|2183146_2183890_+	triose-phosphate isomerase	NA	NA	NA	NA
WP_015067139.1\|2183900_2184347_+	preprotein translocase subunit SecG	NA	NA	NA	NA
WP_015067140.1\|2184707_2187002_+	EAL domain-containing protein	NA	NA	NA	NA
WP_015067141.1\|2187196_2187355_+	YqaE/Pmp3 family membrane protein	NA	NA	NA	NA
WP_015067142.1\|2187510_2187966_-	hemerythrin domain-containing protein	NA	NA	NA	NA
WP_015067143.1\|2188176_2189520_-	NADP-specific glutamate dehydrogenase	NA	NA	NA	NA
WP_015067144.1\|2189527_2191156_-	hypothetical protein	A0A1V0SBJ0	Catovirus	1.7e-07	24.1
WP_015067145.1\|2191307_2191838_+	DUF2878 domain-containing protein	NA	NA	NA	NA
WP_015067146.1\|2191858_2192563_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_015067147.1\|2192675_2193506_-	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA
WP_085929700.1\|2194245_2195413_+\|transposase	IS3-like element ISAma1 family transposase	A0A0P0I4A4	Acinetobacter_phage	2.6e-58	41.6
WP_020744917.1\|2195410_2195551_-	hypothetical protein	NA	NA	NA	NA
WP_041702717.1\|2196081_2197134_+	DNA topoisomerase IB	A0A0G2Y4T8	Acanthamoeba_polyphaga_mimivirus	1.8e-29	29.9
WP_020743511.1\|2197575_2199090_+	sodium/proline symporter PutP	NA	NA	NA	NA
WP_015067151.1\|2199106_2200216_+	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	5.2e-40	32.3
WP_015067152.1\|2200212_2201460_+	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	1.8e-89	44.2
WP_015067153.1\|2201590_2202541_+	mechanosensitive ion channel	NA	NA	NA	NA
WP_015067154.1\|2202587_2203142_-	HNH endonuclease	A0A1C3NFQ8	Phage_NCTB	4.6e-05	39.7
WP_015067155.1\|2203536_2205648_+	polyribonucleotide nucleotidyltransferase	NA	NA	NA	NA
WP_012518312.1\|2205823_2206117_+	DUF1244 domain-containing protein	NA	NA	NA	NA
WP_015067157.1\|2206801_2207014_+	hypothetical protein	NA	NA	NA	NA
WP_015067158.1\|2207127_2207892_+	hypothetical protein	NA	NA	NA	NA
WP_015067159.1\|2208003_2208699_+	hypothetical protein	NA	NA	NA	NA
WP_015067160.1\|2209192_2210446_+	glycosyltransferase family 1 protein	NA	NA	NA	NA
WP_015066045.1\|2210474_2210870_-	hypothetical protein	NA	NA	NA	NA
WP_015066046.1\|2210841_2212407_-\|transposase	IS66 family transposase	A0A218MNE7	uncultured_virus	2.0e-37	28.9
WP_015066047.1\|2212430_2212766_-	IS66 family insertion sequence element accessory protein TnpB	S5VXZ8	Leptospira_phage	1.9e-09	30.8
WP_015066048.1\|2212765_2213050_-	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
WP_015067161.1\|2213235_2213907_+	hypothetical protein	NA	NA	NA	NA
WP_015067162.1\|2214014_2214245_+	hypothetical protein	NA	NA	NA	NA
WP_015067164.1\|2215342_2216497_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_015067165.1\|2217066_2218044_-	hypothetical protein	NA	NA	NA	NA
WP_041702719.1\|2218159_2218450_+	DUF1244 domain-containing protein	NA	NA	NA	NA
WP_015067167.1\|2218987_2219170_-	hypothetical protein	NA	NA	NA	NA
WP_015067168.1\|2219251_2220760_+	ATP-binding protein	NA	NA	NA	NA
WP_015067169.1\|2221188_2221887_+	hypothetical protein	NA	NA	NA	NA
WP_015067170.1\|2221906_2222665_+	hypothetical protein	NA	NA	NA	NA
WP_015067171.1\|2223095_2223725_+	hypothetical protein	NA	NA	NA	NA
WP_015067172.1\|2223856_2224645_+	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA
WP_080597401.1\|2224654_2224942_+	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA
WP_085929700.1\|2225191_2226359_+\|transposase	IS3-like element ISAma1 family transposase	A0A0P0I4A4	Acinetobacter_phage	2.6e-58	41.6
WP_041703271.1\|2226569_2227073_+	zf-TFIIB domain-containing protein	NA	NA	NA	NA
WP_015067174.1\|2227136_2227586_+	acyltransferase	NA	NA	NA	NA
WP_168104033.1\|2227606_2228209_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_015067176.1\|2228316_2228787_+	hypothetical protein	T1S9H7	Salmonella_phage	1.3e-11	71.1
WP_015067177.1\|2228908_2229313_+	hypothetical protein	NA	NA	NA	NA
WP_015067179.1\|2229618_2230113_+	AAA family ATPase	NA	NA	NA	NA
WP_015067180.1\|2230343_2230661_+	hypothetical protein	NA	NA	NA	NA
WP_015067181.1\|2230694_2231093_+	hypothetical protein	NA	NA	NA	NA
WP_015067182.1\|2231113_2231338_+	hypothetical protein	NA	NA	NA	NA
WP_015067183.1\|2231358_2231616_+	hypothetical protein	NA	NA	NA	NA
WP_015067187.1\|2234028_2234661_+	TonB family protein	NA	NA	NA	NA
WP_012518755.1\|2234641_2236051_-\|transposase	IS66-like element ISAma4 family transposase	NA	NA	NA	NA

DBSCAN-SWA_5

4547915 : 4558958

Organic_Lake_phycodnavirus(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012518686.1\|4547915_4551173_-	DEAD/DEAH box helicase	F2Y0S4	Organic_Lake_phycodnavirus	2.8e-09	22.5
WP_041702929.1\|4551169_4551967_-	hypothetical protein	NA	NA	NA	NA
WP_012518684.1\|4551985_4554127_-	N-6 DNA methylase	A0A220A2U4	Liberibacter_phage	5.9e-24	27.3
WP_012518683.1\|4554147_4556538_-	DEAD/DEAH box helicase family protein	Q5YA94	Bacillus_phage	1.7e-24	26.1
WP_001083515.1\|4556539_4556737_-	helix-turn-helix domain-containing protein	A0A1B1IUF9	uncultured_Mediterranean_phage	1.2e-16	56.5
WP_012518682.1\|4556986_4558729_-	DUF927 domain-containing protein	A0A1B0VP75	Pseudomonas_phage	9.3e-60	32.2
WP_007146785.1\|4558715_4558958_-	AlpA family phage regulatory protein	A0A1V0E8E5	Vibrio_phage	1.5e-08	45.3

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NC_021713

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection