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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP012409 Staphylococcus aureus subsp. aureus Tager 104 chromosome, complete genome 17 crisprs DEDDh,cas3,WYL,csa3 12 4 11 2

Results visualization

1. NZ_CP012409
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP012409_1 109732-109813 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP012409_2 337006-337098 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP012409_3 410913-411058 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP012409_4 724654-724731 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP012409_5 762671-762809 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP012409_6 771706-771793 Unclear NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP012409_7 808558-808636 Unclear NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP012409_8 870690-870788 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP012409_9 1569958-1570043 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP012409_10 1602336-1602419 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP012409_11 1805039-1805172 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP012409_12 1880874-1880959 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP012409_13 1909755-1909838 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP012409_14 2048694-2048822 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP012409_15 2179885-2179971 Orphan NA
1 spacers
csa3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP012409_16 2362254-2362334 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP012409_17 2614585-2614664 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NZ_CP012409_3 3.1|410947|22|NZ_CP012409|PILER-CR 410947-410968 22 NZ_CP012409.1 273463-273484 0 1.0
NZ_CP012409_3 3.1|410947|22|NZ_CP012409|PILER-CR 410947-410968 22 NZ_CP012409.1 414913-414934 0 1.0
NZ_CP012409_3 3.1|410947|22|NZ_CP012409|PILER-CR 410947-410968 22 NZ_CP012409.1 673904-673925 0 1.0
NZ_CP012409_3 3.1|410947|22|NZ_CP012409|PILER-CR 410947-410968 22 NZ_CP012409.1 1154975-1154996 0 1.0
NZ_CP012409_3 3.1|410947|22|NZ_CP012409|PILER-CR 410947-410968 22 NZ_CP012409.1 2401598-2401619 0 1.0
NZ_CP012409_3 3.2|411003|22|NZ_CP012409|PILER-CR 411003-411024 22 NZ_CP012409.1 273463-273484 0 1.0
NZ_CP012409_3 3.2|411003|22|NZ_CP012409|PILER-CR 411003-411024 22 NZ_CP012409.1 414913-414934 0 1.0
NZ_CP012409_3 3.2|411003|22|NZ_CP012409|PILER-CR 411003-411024 22 NZ_CP012409.1 673904-673925 0 1.0
NZ_CP012409_3 3.2|411003|22|NZ_CP012409|PILER-CR 411003-411024 22 NZ_CP012409.1 1154975-1154996 0 1.0
NZ_CP012409_3 3.2|411003|22|NZ_CP012409|PILER-CR 411003-411024 22 NZ_CP012409.1 2401598-2401619 0 1.0
NZ_CP012409_5 5.1|762696|33|NZ_CP012409|CRISPRCasFinder 762696-762728 33 NZ_CP012409.1 123945-123977 0 1.0
NZ_CP012409_5 5.1|762696|33|NZ_CP012409|CRISPRCasFinder 762696-762728 33 NZ_CP012409.1 1569945-1569977 0 1.0
NZ_CP012409_5 5.1|762696|33|NZ_CP012409|CRISPRCasFinder 762696-762728 33 NZ_CP012409.1 2401576-2401608 0 1.0
NZ_CP012409_5 5.1|762696|33|NZ_CP012409|CRISPRCasFinder 762696-762728 33 NZ_CP012409.1 2734525-2734557 0 1.0
NZ_CP012409_6 6.1|771735|30|NZ_CP012409|CRISPRCasFinder 771735-771764 30 NZ_CP012409.1 273497-273526 0 1.0
NZ_CP012409_6 6.1|771735|30|NZ_CP012409|CRISPRCasFinder 771735-771764 30 NZ_CP012409.1 1737368-1737397 0 1.0
NZ_CP012409_6 6.1|771735|30|NZ_CP012409|CRISPRCasFinder 771735-771764 30 NZ_CP012409.1 2014302-2014331 0 1.0
NZ_CP012409_6 6.1|771735|30|NZ_CP012409|CRISPRCasFinder 771735-771764 30 NZ_CP012409.1 2719998-2720027 0 1.0
NZ_CP012409_7 7.1|808581|33|NZ_CP012409|CRISPRCasFinder 808581-808613 33 NZ_CP012409.1 273445-273477 0 1.0
NZ_CP012409_7 7.1|808581|33|NZ_CP012409|CRISPRCasFinder 808581-808613 33 NZ_CP012409.1 2014239-2014271 0 1.0
NZ_CP012409_7 7.1|808581|33|NZ_CP012409|CRISPRCasFinder 808581-808613 33 NZ_CP012409.1 2033437-2033469 0 1.0
NZ_CP012409_9 9.1|1569988|26|NZ_CP012409|CRISPRCasFinder 1569988-1570013 26 NZ_CP012409.1 2014263-2014288 0 1.0
NZ_CP012409_12 12.1|1880904|26|NZ_CP012409|CRISPRCasFinder 1880904-1880929 26 NZ_CP012409.1 2014263-2014288 0 1.0
NZ_CP012409_13 13.1|1909784|26|NZ_CP012409|CRISPRCasFinder 1909784-1909809 26 NZ_CP012409.1 273433-273458 0 1.0
NZ_CP012409_13 13.1|1909784|26|NZ_CP012409|CRISPRCasFinder 1909784-1909809 26 NZ_CP012409.1 1426760-1426785 0 1.0
NZ_CP012409_3 3.1|410947|22|NZ_CP012409|PILER-CR 410947-410968 22 NZ_CP012409.1 149995-150016 1 0.955
NZ_CP012409_3 3.1|410947|22|NZ_CP012409|PILER-CR 410947-410968 22 NZ_CP012409.1 554029-554050 1 0.955
NZ_CP012409_3 3.1|410947|22|NZ_CP012409|PILER-CR 410947-410968 22 NZ_CP012409.1 1315759-1315780 1 0.955
NZ_CP012409_3 3.1|410947|22|NZ_CP012409|PILER-CR 410947-410968 22 NZ_CP012409.1 2734547-2734568 1 0.955
NZ_CP012409_3 3.2|411003|22|NZ_CP012409|PILER-CR 411003-411024 22 NZ_CP012409.1 149995-150016 1 0.955
NZ_CP012409_3 3.2|411003|22|NZ_CP012409|PILER-CR 411003-411024 22 NZ_CP012409.1 554029-554050 1 0.955
NZ_CP012409_3 3.2|411003|22|NZ_CP012409|PILER-CR 411003-411024 22 NZ_CP012409.1 1315759-1315780 1 0.955
NZ_CP012409_3 3.2|411003|22|NZ_CP012409|PILER-CR 411003-411024 22 NZ_CP012409.1 2734547-2734568 1 0.955
NZ_CP012409_5 5.1|762696|33|NZ_CP012409|CRISPRCasFinder 762696-762728 33 NZ_CP012409.1 414924-414956 1 0.97
NZ_CP012409_5 5.1|762696|33|NZ_CP012409|CRISPRCasFinder 762696-762728 33 NZ_CP012409.1 720520-720552 1 0.97
NZ_CP012409_5 5.1|762696|33|NZ_CP012409|CRISPRCasFinder 762696-762728 33 NZ_CP012409.1 762810-762842 1 0.97
NZ_CP012409_5 5.1|762696|33|NZ_CP012409|CRISPRCasFinder 762696-762728 33 NZ_CP012409.1 1189152-1189184 1 0.97
NZ_CP012409_5 5.1|762696|33|NZ_CP012409|CRISPRCasFinder 762696-762728 33 NZ_CP012409.1 2412195-2412227 1 0.97
NZ_CP012409_5 5.2|762754|31|NZ_CP012409|CRISPRCasFinder 762754-762784 31 NZ_CP012409.1 762639-762669 1 0.968
NZ_CP012409_7 7.1|808581|33|NZ_CP012409|CRISPRCasFinder 808581-808613 33 NZ_CP012409.1 414920-414952 1 0.97
NZ_CP012409_7 7.1|808581|33|NZ_CP012409|CRISPRCasFinder 808581-808613 33 NZ_CP012409.1 673911-673943 1 0.97
NZ_CP012409_7 7.1|808581|33|NZ_CP012409|CRISPRCasFinder 808581-808613 33 NZ_CP012409.1 1154957-1154989 1 0.97
NZ_CP012409_7 7.1|808581|33|NZ_CP012409|CRISPRCasFinder 808581-808613 33 NZ_CP012409.1 1426772-1426804 1 0.97
NZ_CP012409_7 7.1|808581|33|NZ_CP012409|CRISPRCasFinder 808581-808613 33 NZ_CP012409.1 2556775-2556807 1 0.97
NZ_CP012409_9 9.1|1569988|26|NZ_CP012409|CRISPRCasFinder 1569988-1570013 26 NZ_CP012409.1 273428-273453 1 0.962
NZ_CP012409_9 9.1|1569988|26|NZ_CP012409|CRISPRCasFinder 1569988-1570013 26 NZ_CP012409.1 2556799-2556824 1 0.962
NZ_CP012409_10 10.1|1602361|34|NZ_CP012409|CRISPRCasFinder 1602361-1602394 34 NZ_CP012409.1 1315722-1315755 1 0.971
NZ_CP012409_12 12.1|1880904|26|NZ_CP012409|CRISPRCasFinder 1880904-1880929 26 NZ_CP012409.1 273428-273453 1 0.962
NZ_CP012409_12 12.1|1880904|26|NZ_CP012409|CRISPRCasFinder 1880904-1880929 26 NZ_CP012409.1 2556799-2556824 1 0.962
NZ_CP012409_13 13.1|1909784|26|NZ_CP012409|CRISPRCasFinder 1909784-1909809 26 NZ_CP012409.1 673930-673955 1 0.962
NZ_CP012409_13 13.1|1909784|26|NZ_CP012409|CRISPRCasFinder 1909784-1909809 26 NZ_CP012409.1 762802-762827 1 0.962
NZ_CP012409_13 13.1|1909784|26|NZ_CP012409|CRISPRCasFinder 1909784-1909809 26 NZ_CP012409.1 1154945-1154970 1 0.962
NZ_CP012409_13 13.1|1909784|26|NZ_CP012409|CRISPRCasFinder 1909784-1909809 26 NZ_CP012409.1 2014258-2014283 1 0.962
NZ_CP012409_13 13.1|1909784|26|NZ_CP012409|CRISPRCasFinder 1909784-1909809 26 NZ_CP012409.1 2033456-2033481 1 0.962
NZ_CP012409_13 13.1|1909784|26|NZ_CP012409|CRISPRCasFinder 1909784-1909809 26 NZ_CP012409.1 2700270-2700295 1 0.962
NZ_CP012409_17 17.1|2614609|32|NZ_CP012409|CRISPRCasFinder 2614609-2614640 32 NZ_CP012409.1 415068-415099 1 0.969
NZ_CP012409_5 5.1|762696|33|NZ_CP012409|CRISPRCasFinder 762696-762728 33 NZ_CP012409.1 273441-273473 2 0.939
NZ_CP012409_5 5.2|762754|31|NZ_CP012409|CRISPRCasFinder 762754-762784 31 NZ_CP012409.1 724708-724738 2 0.935
NZ_CP012409_5 5.2|762754|31|NZ_CP012409|CRISPRCasFinder 762754-762784 31 NZ_CP012409.1 1315660-1315690 2 0.935
NZ_CP012409_6 6.1|771735|30|NZ_CP012409|CRISPRCasFinder 771735-771764 30 NZ_CP012409.1 1189110-1189139 2 0.933
NZ_CP012409_7 7.1|808581|33|NZ_CP012409|CRISPRCasFinder 808581-808613 33 NZ_CP012409.1 123949-123981 2 0.939
NZ_CP012409_7 7.1|808581|33|NZ_CP012409|CRISPRCasFinder 808581-808613 33 NZ_CP012409.1 410898-410930 2 0.939
NZ_CP012409_7 7.1|808581|33|NZ_CP012409|CRISPRCasFinder 808581-808613 33 NZ_CP012409.1 554011-554043 2 0.939
NZ_CP012409_7 7.1|808581|33|NZ_CP012409|CRISPRCasFinder 808581-808613 33 NZ_CP012409.1 1569949-1569981 2 0.939
NZ_CP012409_7 7.1|808581|33|NZ_CP012409|CRISPRCasFinder 808581-808613 33 NZ_CP012409.1 1880865-1880897 2 0.939
NZ_CP012409_7 7.1|808581|33|NZ_CP012409|CRISPRCasFinder 808581-808613 33 NZ_CP012409.1 2362248-2362280 2 0.939
NZ_CP012409_7 7.1|808581|33|NZ_CP012409|CRISPRCasFinder 808581-808613 33 NZ_CP012409.1 2401580-2401612 2 0.939
NZ_CP012409_7 7.1|808581|33|NZ_CP012409|CRISPRCasFinder 808581-808613 33 NZ_CP012409.1 2734529-2734561 2 0.939
NZ_CP012409_9 9.1|1569988|26|NZ_CP012409|CRISPRCasFinder 1569988-1570013 26 NZ_CP012409.1 2700265-2700290 2 0.923
NZ_CP012409_12 12.1|1880904|26|NZ_CP012409|CRISPRCasFinder 1880904-1880929 26 NZ_CP012409.1 2700265-2700290 2 0.923
NZ_CP012409_13 13.1|1909784|26|NZ_CP012409|CRISPRCasFinder 1909784-1909809 26 NZ_CP012409.1 123937-123962 2 0.923
NZ_CP012409_13 13.1|1909784|26|NZ_CP012409|CRISPRCasFinder 1909784-1909809 26 NZ_CP012409.1 720535-720560 2 0.923
NZ_CP012409_13 13.1|1909784|26|NZ_CP012409|CRISPRCasFinder 1909784-1909809 26 NZ_CP012409.1 1189167-1189192 2 0.923
NZ_CP012409_13 13.1|1909784|26|NZ_CP012409|CRISPRCasFinder 1909784-1909809 26 NZ_CP012409.1 2401568-2401593 2 0.923
NZ_CP012409_13 13.1|1909784|26|NZ_CP012409|CRISPRCasFinder 1909784-1909809 26 NZ_CP012409.1 2412187-2412212 2 0.923
NZ_CP012409_13 13.1|1909784|26|NZ_CP012409|CRISPRCasFinder 1909784-1909809 26 NZ_CP012409.1 2734517-2734542 2 0.923
NZ_CP012409_16 16.1|2362279|31|NZ_CP012409|CRISPRCasFinder 2362279-2362309 31 NZ_CP012409.1 2401611-2401641 2 0.935

1. spacer 3.1|410947|22|NZ_CP012409|PILER-CR matches to position: 273463-273484, mismatch: 0, identity: 1.0

gccaacttgcacattattgtaa	CRISPR spacer
gccaacttgcacattattgtaa	Protospacer
**********************

2. spacer 3.1|410947|22|NZ_CP012409|PILER-CR matches to position: 414913-414934, mismatch: 0, identity: 1.0

gccaacttgcacattattgtaa	CRISPR spacer
gccaacttgcacattattgtaa	Protospacer
**********************

3. spacer 3.1|410947|22|NZ_CP012409|PILER-CR matches to position: 673904-673925, mismatch: 0, identity: 1.0

gccaacttgcacattattgtaa	CRISPR spacer
gccaacttgcacattattgtaa	Protospacer
**********************

4. spacer 3.1|410947|22|NZ_CP012409|PILER-CR matches to position: 1154975-1154996, mismatch: 0, identity: 1.0

gccaacttgcacattattgtaa	CRISPR spacer
gccaacttgcacattattgtaa	Protospacer
**********************

5. spacer 3.1|410947|22|NZ_CP012409|PILER-CR matches to position: 2401598-2401619, mismatch: 0, identity: 1.0

gccaacttgcacattattgtaa	CRISPR spacer
gccaacttgcacattattgtaa	Protospacer
**********************

6. spacer 3.2|411003|22|NZ_CP012409|PILER-CR matches to position: 273463-273484, mismatch: 0, identity: 1.0

gccaacttgcacattattgtaa	CRISPR spacer
gccaacttgcacattattgtaa	Protospacer
**********************

7. spacer 3.2|411003|22|NZ_CP012409|PILER-CR matches to position: 414913-414934, mismatch: 0, identity: 1.0

gccaacttgcacattattgtaa	CRISPR spacer
gccaacttgcacattattgtaa	Protospacer
**********************

8. spacer 3.2|411003|22|NZ_CP012409|PILER-CR matches to position: 673904-673925, mismatch: 0, identity: 1.0

gccaacttgcacattattgtaa	CRISPR spacer
gccaacttgcacattattgtaa	Protospacer
**********************

9. spacer 3.2|411003|22|NZ_CP012409|PILER-CR matches to position: 1154975-1154996, mismatch: 0, identity: 1.0

gccaacttgcacattattgtaa	CRISPR spacer
gccaacttgcacattattgtaa	Protospacer
**********************

10. spacer 3.2|411003|22|NZ_CP012409|PILER-CR matches to position: 2401598-2401619, mismatch: 0, identity: 1.0

gccaacttgcacattattgtaa	CRISPR spacer
gccaacttgcacattattgtaa	Protospacer
**********************

11. spacer 5.1|762696|33|NZ_CP012409|CRISPRCasFinder matches to position: 123945-123977, mismatch: 0, identity: 1.0

cagaagctgacgaaaagtcagcttacaataatg	CRISPR spacer
cagaagctgacgaaaagtcagcttacaataatg	Protospacer
*********************************

12. spacer 5.1|762696|33|NZ_CP012409|CRISPRCasFinder matches to position: 1569945-1569977, mismatch: 0, identity: 1.0

cagaagctgacgaaaagtcagcttacaataatg	CRISPR spacer
cagaagctgacgaaaagtcagcttacaataatg	Protospacer
*********************************

13. spacer 5.1|762696|33|NZ_CP012409|CRISPRCasFinder matches to position: 2401576-2401608, mismatch: 0, identity: 1.0

cagaagctgacgaaaagtcagcttacaataatg	CRISPR spacer
cagaagctgacgaaaagtcagcttacaataatg	Protospacer
*********************************

14. spacer 5.1|762696|33|NZ_CP012409|CRISPRCasFinder matches to position: 2734525-2734557, mismatch: 0, identity: 1.0

cagaagctgacgaaaagtcagcttacaataatg	CRISPR spacer
cagaagctgacgaaaagtcagcttacaataatg	Protospacer
*********************************

15. spacer 6.1|771735|30|NZ_CP012409|CRISPRCasFinder matches to position: 273497-273526, mismatch: 0, identity: 1.0

aagagaaattggattcccaatttctacaga	CRISPR spacer
aagagaaattggattcccaatttctacaga	Protospacer
******************************

16. spacer 6.1|771735|30|NZ_CP012409|CRISPRCasFinder matches to position: 1737368-1737397, mismatch: 0, identity: 1.0

aagagaaattggattcccaatttctacaga	CRISPR spacer
aagagaaattggattcccaatttctacaga	Protospacer
******************************

17. spacer 6.1|771735|30|NZ_CP012409|CRISPRCasFinder matches to position: 2014302-2014331, mismatch: 0, identity: 1.0

aagagaaattggattcccaatttctacaga	CRISPR spacer
aagagaaattggattcccaatttctacaga	Protospacer
******************************

18. spacer 6.1|771735|30|NZ_CP012409|CRISPRCasFinder matches to position: 2719998-2720027, mismatch: 0, identity: 1.0

aagagaaattggattcccaatttctacaga	CRISPR spacer
aagagaaattggattcccaatttctacaga	Protospacer
******************************

19. spacer 7.1|808581|33|NZ_CP012409|CRISPRCasFinder matches to position: 273445-273477, mismatch: 0, identity: 1.0

tgcacattattgtaagctgactttccgccagct	CRISPR spacer
tgcacattattgtaagctgactttccgccagct	Protospacer
*********************************

20. spacer 7.1|808581|33|NZ_CP012409|CRISPRCasFinder matches to position: 2014239-2014271, mismatch: 0, identity: 1.0

tgcacattattgtaagctgactttccgccagct	CRISPR spacer
tgcacattattgtaagctgactttccgccagct	Protospacer
*********************************

21. spacer 7.1|808581|33|NZ_CP012409|CRISPRCasFinder matches to position: 2033437-2033469, mismatch: 0, identity: 1.0

tgcacattattgtaagctgactttccgccagct	CRISPR spacer
tgcacattattgtaagctgactttccgccagct	Protospacer
*********************************

22. spacer 9.1|1569988|26|NZ_CP012409|CRISPRCasFinder matches to position: 2014263-2014288, mismatch: 0, identity: 1.0

cggggccccaacatagaagctggcgg	CRISPR spacer
cggggccccaacatagaagctggcgg	Protospacer
**************************

23. spacer 12.1|1880904|26|NZ_CP012409|CRISPRCasFinder matches to position: 2014263-2014288, mismatch: 0, identity: 1.0

cggggccccaacatagaagctggcgg	CRISPR spacer
cggggccccaacatagaagctggcgg	Protospacer
**************************

24. spacer 13.1|1909784|26|NZ_CP012409|CRISPRCasFinder matches to position: 273433-273458, mismatch: 0, identity: 1.0

actttccgccagcttctgtgttgggg	CRISPR spacer
actttccgccagcttctgtgttgggg	Protospacer
**************************

25. spacer 13.1|1909784|26|NZ_CP012409|CRISPRCasFinder matches to position: 1426760-1426785, mismatch: 0, identity: 1.0

actttccgccagcttctgtgttgggg	CRISPR spacer
actttccgccagcttctgtgttgggg	Protospacer
**************************

26. spacer 3.1|410947|22|NZ_CP012409|PILER-CR matches to position: 149995-150016, mismatch: 1, identity: 0.955

gccaacttgcacattattgtaa	CRISPR spacer
gccaacttgcacatttttgtaa	Protospacer
*************** ******

27. spacer 3.1|410947|22|NZ_CP012409|PILER-CR matches to position: 554029-554050, mismatch: 1, identity: 0.955

gccaacttgcacattattgtaa	CRISPR spacer
gccgacttgcacattattgtaa	Protospacer
***.******************

28. spacer 3.1|410947|22|NZ_CP012409|PILER-CR matches to position: 1315759-1315780, mismatch: 1, identity: 0.955

gccaacttgcacattattgtaa	CRISPR spacer
gccaactcgcacattattgtaa	Protospacer
*******.**************

29. spacer 3.1|410947|22|NZ_CP012409|PILER-CR matches to position: 2734547-2734568, mismatch: 1, identity: 0.955

gccaacttgcacattattgtaa	CRISPR spacer
gcgaacttgcacattattgtaa	Protospacer
** *******************

30. spacer 3.2|411003|22|NZ_CP012409|PILER-CR matches to position: 149995-150016, mismatch: 1, identity: 0.955

gccaacttgcacattattgtaa	CRISPR spacer
gccaacttgcacatttttgtaa	Protospacer
*************** ******

31. spacer 3.2|411003|22|NZ_CP012409|PILER-CR matches to position: 554029-554050, mismatch: 1, identity: 0.955

gccaacttgcacattattgtaa	CRISPR spacer
gccgacttgcacattattgtaa	Protospacer
***.******************

32. spacer 3.2|411003|22|NZ_CP012409|PILER-CR matches to position: 1315759-1315780, mismatch: 1, identity: 0.955

gccaacttgcacattattgtaa	CRISPR spacer
gccaactcgcacattattgtaa	Protospacer
*******.**************

33. spacer 3.2|411003|22|NZ_CP012409|PILER-CR matches to position: 2734547-2734568, mismatch: 1, identity: 0.955

gccaacttgcacattattgtaa	CRISPR spacer
gcgaacttgcacattattgtaa	Protospacer
** *******************

34. spacer 5.1|762696|33|NZ_CP012409|CRISPRCasFinder matches to position: 414924-414956, mismatch: 1, identity: 0.97

cagaagctgacgaaaagtcagcttacaataatg	CRISPR spacer
cagaagctggcgaaaagtcagcttacaataatg	Protospacer
*********.***********************

35. spacer 5.1|762696|33|NZ_CP012409|CRISPRCasFinder matches to position: 720520-720552, mismatch: 1, identity: 0.97

cagaagctgacgaaaagtcagcttacaataatg	CRISPR spacer
cagaagctgacgaaaagtcagcttacgataatg	Protospacer
**************************.******

36. spacer 5.1|762696|33|NZ_CP012409|CRISPRCasFinder matches to position: 762810-762842, mismatch: 1, identity: 0.97

cagaagctgacgaaaagtcagcttacaataatg	CRISPR spacer
cagaagctgacggaaagtcagcttacaataatg	Protospacer
************.********************

37. spacer 5.1|762696|33|NZ_CP012409|CRISPRCasFinder matches to position: 1189152-1189184, mismatch: 1, identity: 0.97

cagaagctgacgaaaagtcagcttacaataatg	CRISPR spacer
cagaagctgacgtaaagtcagcttacaataatg	Protospacer
************ ********************

38. spacer 5.1|762696|33|NZ_CP012409|CRISPRCasFinder matches to position: 2412195-2412227, mismatch: 1, identity: 0.97

cagaagctgacgaaaagtcagcttacaataatg	CRISPR spacer
cagaagctgacgaaaagtcagcttacgataatg	Protospacer
**************************.******

39. spacer 5.2|762754|31|NZ_CP012409|CRISPRCasFinder matches to position: 762639-762669, mismatch: 1, identity: 0.968

tagtgaatttcgaaatgaaattctacaggca	CRISPR spacer
tagagaatttcgaaatgaaattctacaggca	Protospacer
*** ***************************

40. spacer 7.1|808581|33|NZ_CP012409|CRISPRCasFinder matches to position: 414920-414952, mismatch: 1, identity: 0.97

tgcacattattgtaagctgactttccgccagct	CRISPR spacer
tgcacattattgtaagctgacttttcgccagct	Protospacer
************************.********

41. spacer 7.1|808581|33|NZ_CP012409|CRISPRCasFinder matches to position: 673911-673943, mismatch: 1, identity: 0.97

tgcacattattgtaagctgactttccgccagct	CRISPR spacer
tgcacattattgtaagctgactttccaccagct	Protospacer
**************************.******

42. spacer 7.1|808581|33|NZ_CP012409|CRISPRCasFinder matches to position: 1154957-1154989, mismatch: 1, identity: 0.97

tgcacattattgtaagctgactttccgccagct	CRISPR spacer
tgcacattattgtaagctgactttccaccagct	Protospacer
**************************.******

43. spacer 7.1|808581|33|NZ_CP012409|CRISPRCasFinder matches to position: 1426772-1426804, mismatch: 1, identity: 0.97

tgcacattattgtaagctgactttccgccagct	CRISPR spacer
tgcacattattgtaagatgactttccgccagct	Protospacer
**************** ****************

44. spacer 7.1|808581|33|NZ_CP012409|CRISPRCasFinder matches to position: 2556775-2556807, mismatch: 1, identity: 0.97

tgcacattattgtaagctgactttccgccagct	CRISPR spacer
tgcacattattgtaagctggctttccgccagct	Protospacer
*******************.*************

45. spacer 9.1|1569988|26|NZ_CP012409|CRISPRCasFinder matches to position: 273428-273453, mismatch: 1, identity: 0.962

cggggccccaacatagaagctggcgg	CRISPR spacer
cggggccccaacacagaagctggcgg	Protospacer
*************.************

46. spacer 9.1|1569988|26|NZ_CP012409|CRISPRCasFinder matches to position: 2556799-2556824, mismatch: 1, identity: 0.962

cggggccccaacatagaagctggcgg	CRISPR spacer
cggggccccaacatagtagctggcgg	Protospacer
**************** *********

47. spacer 10.1|1602361|34|NZ_CP012409|CRISPRCasFinder matches to position: 1315722-1315755, mismatch: 1, identity: 0.971

cccccaacatagagaaattggaacaccaatttca	CRISPR spacer
cccccaacacagagaaattggaacaccaatttca	Protospacer
*********.************************

48. spacer 12.1|1880904|26|NZ_CP012409|CRISPRCasFinder matches to position: 273428-273453, mismatch: 1, identity: 0.962

cggggccccaacatagaagctggcgg	CRISPR spacer
cggggccccaacacagaagctggcgg	Protospacer
*************.************

49. spacer 12.1|1880904|26|NZ_CP012409|CRISPRCasFinder matches to position: 2556799-2556824, mismatch: 1, identity: 0.962

cggggccccaacatagaagctggcgg	CRISPR spacer
cggggccccaacatagtagctggcgg	Protospacer
**************** *********

50. spacer 13.1|1909784|26|NZ_CP012409|CRISPRCasFinder matches to position: 673930-673955, mismatch: 1, identity: 0.962

actttccgccagcttctgtgttgggg	CRISPR spacer
actttccaccagcttctgtgttgggg	Protospacer
*******.******************

51. spacer 13.1|1909784|26|NZ_CP012409|CRISPRCasFinder matches to position: 762802-762827, mismatch: 1, identity: 0.962

actttccgccagcttctgtgttgggg	CRISPR spacer
actttccgtcagcttctgtgttgggg	Protospacer
********.*****************

52. spacer 13.1|1909784|26|NZ_CP012409|CRISPRCasFinder matches to position: 1154945-1154970, mismatch: 1, identity: 0.962

actttccgccagcttctgtgttgggg	CRISPR spacer
actttccaccagcttctgtgttgggg	Protospacer
*******.******************

53. spacer 13.1|1909784|26|NZ_CP012409|CRISPRCasFinder matches to position: 2014258-2014283, mismatch: 1, identity: 0.962

actttccgccagcttctgtgttgggg	CRISPR spacer
actttccgccagcttctatgttgggg	Protospacer
*****************.********

54. spacer 13.1|1909784|26|NZ_CP012409|CRISPRCasFinder matches to position: 2033456-2033481, mismatch: 1, identity: 0.962

actttccgccagcttctgtgttgggg	CRISPR spacer
actttccgccagcttctatgttgggg	Protospacer
*****************.********

55. spacer 13.1|1909784|26|NZ_CP012409|CRISPRCasFinder matches to position: 2700270-2700295, mismatch: 1, identity: 0.962

actttccgccagcttctgtgttgggg	CRISPR spacer
actttccgtcagcttctgtgttgggg	Protospacer
********.*****************

56. spacer 17.1|2614609|32|NZ_CP012409|CRISPRCasFinder matches to position: 415068-415099, mismatch: 1, identity: 0.969

ctatgttggggcccgccccaacttgcattgtt	CRISPR spacer
ctatgttggggcccaccccaacttgcattgtt	Protospacer
**************.*****************

57. spacer 5.1|762696|33|NZ_CP012409|CRISPRCasFinder matches to position: 273441-273473, mismatch: 2, identity: 0.939

cagaagctgacgaaaagtcagcttacaataatg	CRISPR spacer
cagaagctggcggaaagtcagcttacaataatg	Protospacer
*********.**.********************

58. spacer 5.2|762754|31|NZ_CP012409|CRISPRCasFinder matches to position: 724708-724738, mismatch: 2, identity: 0.935

tagtgaatttcgaaatgaaattctacaggca	CRISPR spacer
tagagaatttcgaaaagaaattctacaggca	Protospacer
*** *********** ***************

59. spacer 5.2|762754|31|NZ_CP012409|CRISPRCasFinder matches to position: 1315660-1315690, mismatch: 2, identity: 0.935

tagtgaatttcgaaatgaaattctacaggca	CRISPR spacer
tagagaatttcgaaaagaaattctacaggca	Protospacer
*** *********** ***************

60. spacer 6.1|771735|30|NZ_CP012409|CRISPRCasFinder matches to position: 1189110-1189139, mismatch: 2, identity: 0.933

aagagaaattggattcccaatttctacaga	CRISPR spacer
aagagaaattggattcctaatttctataga	Protospacer
*****************.********.***

61. spacer 7.1|808581|33|NZ_CP012409|CRISPRCasFinder matches to position: 123949-123981, mismatch: 2, identity: 0.939

tgcacattattgtaagctgactttccgccagct	CRISPR spacer
tgcacattattgtaagctgacttttcgtcagct	Protospacer
************************.**.*****

62. spacer 7.1|808581|33|NZ_CP012409|CRISPRCasFinder matches to position: 410898-410930, mismatch: 2, identity: 0.939

tgcacattattgtaagctgactttccgccagct	CRISPR spacer
tgcacattattgtatgctgactttctgccagct	Protospacer
************** **********.*******

63. spacer 7.1|808581|33|NZ_CP012409|CRISPRCasFinder matches to position: 554011-554043, mismatch: 2, identity: 0.939

tgcacattattgtaagctgactttccgccagct	CRISPR spacer
tgcacattattgtaagctgacttttcgtcagct	Protospacer
************************.**.*****

64. spacer 7.1|808581|33|NZ_CP012409|CRISPRCasFinder matches to position: 1569949-1569981, mismatch: 2, identity: 0.939

tgcacattattgtaagctgactttccgccagct	CRISPR spacer
tgcacattattgtaagctgacttttcgtcagct	Protospacer
************************.**.*****

65. spacer 7.1|808581|33|NZ_CP012409|CRISPRCasFinder matches to position: 1880865-1880897, mismatch: 2, identity: 0.939

tgcacattattgtaagctgactttccgccagct	CRISPR spacer
tgcacattattgtaagctgacttttcgtcagct	Protospacer
************************.**.*****

66. spacer 7.1|808581|33|NZ_CP012409|CRISPRCasFinder matches to position: 2362248-2362280, mismatch: 2, identity: 0.939

tgcacattattgtaagctgactttccgccagct	CRISPR spacer
tgcacattgttgtaagctgactttccgacagct	Protospacer
********.****************** *****

67. spacer 7.1|808581|33|NZ_CP012409|CRISPRCasFinder matches to position: 2401580-2401612, mismatch: 2, identity: 0.939

tgcacattattgtaagctgactttccgccagct	CRISPR spacer
tgcacattattgtaagctgacttttcgtcagct	Protospacer
************************.**.*****

68. spacer 7.1|808581|33|NZ_CP012409|CRISPRCasFinder matches to position: 2734529-2734561, mismatch: 2, identity: 0.939

tgcacattattgtaagctgactttccgccagct	CRISPR spacer
tgcacattattgtaagctgacttttcgtcagct	Protospacer
************************.**.*****

69. spacer 9.1|1569988|26|NZ_CP012409|CRISPRCasFinder matches to position: 2700265-2700290, mismatch: 2, identity: 0.923

cggggccccaacatagaagctggcgg	CRISPR spacer
cggggccccaacacagaagctgacgg	Protospacer
*************.********.***

70. spacer 12.1|1880904|26|NZ_CP012409|CRISPRCasFinder matches to position: 2700265-2700290, mismatch: 2, identity: 0.923

cggggccccaacatagaagctggcgg	CRISPR spacer
cggggccccaacacagaagctgacgg	Protospacer
*************.********.***

71. spacer 13.1|1909784|26|NZ_CP012409|CRISPRCasFinder matches to position: 123937-123962, mismatch: 2, identity: 0.923

actttccgccagcttctgtgttgggg	CRISPR spacer
acttttcgtcagcttctgtgttgggg	Protospacer
*****.**.*****************

72. spacer 13.1|1909784|26|NZ_CP012409|CRISPRCasFinder matches to position: 720535-720560, mismatch: 2, identity: 0.923

actttccgccagcttctgtgttgggg	CRISPR spacer
acttttcgtcagcttctgtgttgggg	Protospacer
*****.**.*****************

73. spacer 13.1|1909784|26|NZ_CP012409|CRISPRCasFinder matches to position: 1189167-1189192, mismatch: 2, identity: 0.923

actttccgccagcttctgtgttgggg	CRISPR spacer
actttacgtcagcttctgtgttgggg	Protospacer
***** **.*****************

74. spacer 13.1|1909784|26|NZ_CP012409|CRISPRCasFinder matches to position: 2401568-2401593, mismatch: 2, identity: 0.923

actttccgccagcttctgtgttgggg	CRISPR spacer
acttttcgtcagcttctgtgttgggg	Protospacer
*****.**.*****************

75. spacer 13.1|1909784|26|NZ_CP012409|CRISPRCasFinder matches to position: 2412187-2412212, mismatch: 2, identity: 0.923

actttccgccagcttctgtgttgggg	CRISPR spacer
acttttcgtcagcttctgtgttgggg	Protospacer
*****.**.*****************

76. spacer 13.1|1909784|26|NZ_CP012409|CRISPRCasFinder matches to position: 2734517-2734542, mismatch: 2, identity: 0.923

actttccgccagcttctgtgttgggg	CRISPR spacer
acttttcgtcagcttctgtgttgggg	Protospacer
*****.**.*****************

77. spacer 16.1|2362279|31|NZ_CP012409|CRISPRCasFinder matches to position: 2401611-2401641, mismatch: 2, identity: 0.935

caagttggcggggccccaacataaaagttga	CRISPR spacer
caagttggcggggccccaacatagaagctga	Protospacer
***********************.***.***

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP012409_13 13.1|1909784|26|NZ_CP012409|CRISPRCasFinder 1909784-1909809 26 NZ_CP017942 Phyllobacterium zundukense strain Tri-48 plasmid unnamed3, complete sequence 343062-343087 4 0.846
NZ_CP012409_13 13.1|1909784|26|NZ_CP012409|CRISPRCasFinder 1909784-1909809 26 NZ_CP022605 Ochrobactrum quorumnocens strain A44 plasmid unnamed1, complete sequence 715506-715531 5 0.808
NZ_CP012409_1 1.1|109759|28|NZ_CP012409|CRISPRCasFinder 109759-109786 28 NZ_CP039640 Azospirillum sp. TSH100 plasmid p1, complete sequence 4595-4622 7 0.75
NZ_CP012409_5 5.2|762754|31|NZ_CP012409|CRISPRCasFinder 762754-762784 31 MK573636 Escherichia phage vB_EcoM_PHB13, partial genome 111151-111181 7 0.774
NZ_CP012409_5 5.2|762754|31|NZ_CP012409|CRISPRCasFinder 762754-762784 31 MN850574 Escherichia phage kaaroe, complete genome 146937-146967 7 0.774
NZ_CP012409_5 5.2|762754|31|NZ_CP012409|CRISPRCasFinder 762754-762784 31 MN655998 Escherichia phage E26, complete genome 123442-123472 7 0.774
NZ_CP012409_5 5.2|762754|31|NZ_CP012409|CRISPRCasFinder 762754-762784 31 MH560358 Escherichia virus KFS-EC, complete genome 67715-67745 7 0.774
NZ_CP012409_5 5.2|762754|31|NZ_CP012409|CRISPRCasFinder 762754-762784 31 MT764208 Escherichia phage JEP8, complete genome 37767-37797 7 0.774
NZ_CP012409_5 5.2|762754|31|NZ_CP012409|CRISPRCasFinder 762754-762784 31 MT478991 Escherichia phage vB_EcoM_011D4, complete genome 74682-74712 7 0.774
NZ_CP012409_5 5.2|762754|31|NZ_CP012409|CRISPRCasFinder 762754-762784 31 MK327941 Escherichia phage vB_EcoM_G37-3, complete genome 125621-125651 7 0.774
NZ_CP012409_5 5.2|762754|31|NZ_CP012409|CRISPRCasFinder 762754-762784 31 NC_009821 Enterobacteria phage Phi1, complete genome 123686-123716 7 0.774
NZ_CP012409_5 5.2|762754|31|NZ_CP012409|CRISPRCasFinder 762754-762784 31 MF327006 Shigella phage Sf20, complete genome 59748-59778 7 0.774
NZ_CP012409_5 5.2|762754|31|NZ_CP012409|CRISPRCasFinder 762754-762784 31 MK327932 Escherichia phage vB_EcoM_G2248, complete genome 130437-130467 7 0.774
NZ_CP012409_5 5.2|762754|31|NZ_CP012409|CRISPRCasFinder 762754-762784 31 NC_025425 Enterobacteria phage GEC-3S complete genome 123227-123257 7 0.774
NZ_CP012409_5 5.2|762754|31|NZ_CP012409|CRISPRCasFinder 762754-762784 31 MN709127 Escherichia virus Ec_Makalu_002, complete genome 124444-124474 7 0.774
NZ_CP012409_5 5.2|762754|31|NZ_CP012409|CRISPRCasFinder 762754-762784 31 MK327947 Escherichia phage vB_EcoM_G5211, complete genome 123818-123848 7 0.774
NZ_CP012409_5 5.2|762754|31|NZ_CP012409|CRISPRCasFinder 762754-762784 31 NC_041936 Escherichia phage ECD7, complete genome 126061-126091 7 0.774
NZ_CP012409_5 5.2|762754|31|NZ_CP012409|CRISPRCasFinder 762754-762784 31 AY343333 Enterobacteria phage RB49, complete genome 123679-123709 7 0.774
NZ_CP012409_5 5.2|762754|31|NZ_CP012409|CRISPRCasFinder 762754-762784 31 MK327935 Escherichia phage vB_EcoM_G2494, complete genome 126616-126646 7 0.774
NZ_CP012409_5 5.2|762754|31|NZ_CP012409|CRISPRCasFinder 762754-762784 31 MK962753 Shigella phage JK32, complete genome 136060-136090 7 0.774
NZ_CP012409_5 5.2|762754|31|NZ_CP012409|CRISPRCasFinder 762754-762784 31 NC_012740 Enterobacteria phage JSE, complete genome 127419-127449 7 0.774
NZ_CP012409_5 5.2|762754|31|NZ_CP012409|CRISPRCasFinder 762754-762784 31 MN850615 Escherichia phage kvi, complete genome 60984-61014 7 0.774
NZ_CP012409_5 5.2|762754|31|NZ_CP012409|CRISPRCasFinder 762754-762784 31 MN894885 Escherichia virus Ec_Makalu_001, complete genome 122751-122781 7 0.774
NZ_CP012409_5 5.2|762754|31|NZ_CP012409|CRISPRCasFinder 762754-762784 31 MN882349 Escherichia virus Ec_Makalu_003, complete genome 123137-123167 7 0.774
NZ_CP012409_5 5.2|762754|31|NZ_CP012409|CRISPRCasFinder 762754-762784 31 NZ_LT984809 Cupriavidus taiwanensis isolate Cupriavidus taiwanensis STM 8555 plasmid I, complete sequence 102950-102980 8 0.742
NZ_CP012409_6 6.1|771735|30|NZ_CP012409|CRISPRCasFinder 771735-771764 30 MH809530 Lactobacillus phage Dionysus, complete genome 54950-54979 8 0.733

1. spacer 13.1|1909784|26|NZ_CP012409|CRISPRCasFinder matches to NZ_CP017942 (Phyllobacterium zundukense strain Tri-48 plasmid unnamed3, complete sequence) position: , mismatch: 4, identity: 0.846

actttccgccagcttctgtgttgggg	CRISPR spacer
cctttccgccagcgtctgtgatggcg	Protospacer
 ************ ****** *** *

2. spacer 13.1|1909784|26|NZ_CP012409|CRISPRCasFinder matches to NZ_CP022605 (Ochrobactrum quorumnocens strain A44 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.808

actttccgccagcttctgtgttgggg	CRISPR spacer
gatctccgccagcttctgtgtttggc	Protospacer
. *.****************** ** 

3. spacer 1.1|109759|28|NZ_CP012409|CRISPRCasFinder matches to NZ_CP039640 (Azospirillum sp. TSH100 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.75

tgaaattctacagacaatgcaagttggc	CRISPR spacer
gttaattctacagacaatgcaggtgagt	Protospacer
   ******************.** .*.

4. spacer 5.2|762754|31|NZ_CP012409|CRISPRCasFinder matches to MK573636 (Escherichia phage vB_EcoM_PHB13, partial genome) position: , mismatch: 7, identity: 0.774

tagtgaatttcgaaatgaaattctacaggca	CRISPR spacer
tcgtacttttcgaaataaaattctactggct	Protospacer
* **.  *********.********* *** 

5. spacer 5.2|762754|31|NZ_CP012409|CRISPRCasFinder matches to MN850574 (Escherichia phage kaaroe, complete genome) position: , mismatch: 7, identity: 0.774

tagtgaatttcgaaatgaaattctacaggca	CRISPR spacer
tcgtacttttcgaaataaaattctactggct	Protospacer
* **.  *********.********* *** 

6. spacer 5.2|762754|31|NZ_CP012409|CRISPRCasFinder matches to MN655998 (Escherichia phage E26, complete genome) position: , mismatch: 7, identity: 0.774

tagtgaatttcgaaatgaaattctacaggca	CRISPR spacer
tcgtacttttcgaaataaaattctactggct	Protospacer
* **.  *********.********* *** 

7. spacer 5.2|762754|31|NZ_CP012409|CRISPRCasFinder matches to MH560358 (Escherichia virus KFS-EC, complete genome) position: , mismatch: 7, identity: 0.774

tagtgaatttcgaaatgaaattctacaggca	CRISPR spacer
tcgtacttttcgaaataaaattctactggct	Protospacer
* **.  *********.********* *** 

8. spacer 5.2|762754|31|NZ_CP012409|CRISPRCasFinder matches to MT764208 (Escherichia phage JEP8, complete genome) position: , mismatch: 7, identity: 0.774

tagtgaatttcgaaatgaaattctacaggca	CRISPR spacer
tcgtacttttcgaaataaaattctactggct	Protospacer
* **.  *********.********* *** 

9. spacer 5.2|762754|31|NZ_CP012409|CRISPRCasFinder matches to MT478991 (Escherichia phage vB_EcoM_011D4, complete genome) position: , mismatch: 7, identity: 0.774

tagtgaatttcgaaatgaaattctacaggca	CRISPR spacer
tcgtacttttcgaaataaaattctactggct	Protospacer
* **.  *********.********* *** 

10. spacer 5.2|762754|31|NZ_CP012409|CRISPRCasFinder matches to MK327941 (Escherichia phage vB_EcoM_G37-3, complete genome) position: , mismatch: 7, identity: 0.774

tagtgaatttcgaaatgaaattctacaggca	CRISPR spacer
tcgtacttttcgaaataaaattctactggct	Protospacer
* **.  *********.********* *** 

11. spacer 5.2|762754|31|NZ_CP012409|CRISPRCasFinder matches to NC_009821 (Enterobacteria phage Phi1, complete genome) position: , mismatch: 7, identity: 0.774

tagtgaatttcgaaatgaaattctacaggca	CRISPR spacer
tcgtacttttcgaaataaaattctactggct	Protospacer
* **.  *********.********* *** 

12. spacer 5.2|762754|31|NZ_CP012409|CRISPRCasFinder matches to MF327006 (Shigella phage Sf20, complete genome) position: , mismatch: 7, identity: 0.774

tagtgaatttcgaaatgaaattctacaggca	CRISPR spacer
tcgtacttttcgaaataaaattctactggct	Protospacer
* **.  *********.********* *** 

13. spacer 5.2|762754|31|NZ_CP012409|CRISPRCasFinder matches to MK327932 (Escherichia phage vB_EcoM_G2248, complete genome) position: , mismatch: 7, identity: 0.774

tagtgaatttcgaaatgaaattctacaggca	CRISPR spacer
tcgtacttttcgaaataaaattctactggct	Protospacer
* **.  *********.********* *** 

14. spacer 5.2|762754|31|NZ_CP012409|CRISPRCasFinder matches to NC_025425 (Enterobacteria phage GEC-3S complete genome) position: , mismatch: 7, identity: 0.774

tagtgaatttcgaaatgaaattctacaggca	CRISPR spacer
tcgtacttttcgaaataaaattctactggct	Protospacer
* **.  *********.********* *** 

15. spacer 5.2|762754|31|NZ_CP012409|CRISPRCasFinder matches to MN709127 (Escherichia virus Ec_Makalu_002, complete genome) position: , mismatch: 7, identity: 0.774

tagtgaatttcgaaatgaaattctacaggca	CRISPR spacer
tcgtacttttcgaaataaaattctactggct	Protospacer
* **.  *********.********* *** 

16. spacer 5.2|762754|31|NZ_CP012409|CRISPRCasFinder matches to MK327947 (Escherichia phage vB_EcoM_G5211, complete genome) position: , mismatch: 7, identity: 0.774

tagtgaatttcgaaatgaaattctacaggca	CRISPR spacer
tcgtacttttcgaaataaaattctactggct	Protospacer
* **.  *********.********* *** 

17. spacer 5.2|762754|31|NZ_CP012409|CRISPRCasFinder matches to NC_041936 (Escherichia phage ECD7, complete genome) position: , mismatch: 7, identity: 0.774

tagtgaatttcgaaatgaaattctacaggca	CRISPR spacer
tcgtacttttcgaaataaaattctactggct	Protospacer
* **.  *********.********* *** 

18. spacer 5.2|762754|31|NZ_CP012409|CRISPRCasFinder matches to AY343333 (Enterobacteria phage RB49, complete genome) position: , mismatch: 7, identity: 0.774

tagtgaatttcgaaatgaaattctacaggca	CRISPR spacer
tcgtacttttcgaaataaaattctactggct	Protospacer
* **.  *********.********* *** 

19. spacer 5.2|762754|31|NZ_CP012409|CRISPRCasFinder matches to MK327935 (Escherichia phage vB_EcoM_G2494, complete genome) position: , mismatch: 7, identity: 0.774

tagtgaatttcgaaatgaaattctacaggca	CRISPR spacer
tcgtacttttcgaaataaaattctactggct	Protospacer
* **.  *********.********* *** 

20. spacer 5.2|762754|31|NZ_CP012409|CRISPRCasFinder matches to MK962753 (Shigella phage JK32, complete genome) position: , mismatch: 7, identity: 0.774

tagtgaatttcgaaatgaaattctacaggca	CRISPR spacer
tcgtacttttcgaaataaaattctactggct	Protospacer
* **.  *********.********* *** 

21. spacer 5.2|762754|31|NZ_CP012409|CRISPRCasFinder matches to NC_012740 (Enterobacteria phage JSE, complete genome) position: , mismatch: 7, identity: 0.774

tagtgaatttcgaaatgaaattctacaggca	CRISPR spacer
tcgtacttttcgaaataaaattctactggct	Protospacer
* **.  *********.********* *** 

22. spacer 5.2|762754|31|NZ_CP012409|CRISPRCasFinder matches to MN850615 (Escherichia phage kvi, complete genome) position: , mismatch: 7, identity: 0.774

tagtgaatttcgaaatgaaattctacaggca	CRISPR spacer
tcgtacttttcgaaataaaattctactggct	Protospacer
* **.  *********.********* *** 

23. spacer 5.2|762754|31|NZ_CP012409|CRISPRCasFinder matches to MN894885 (Escherichia virus Ec_Makalu_001, complete genome) position: , mismatch: 7, identity: 0.774

tagtgaatttcgaaatgaaattctacaggca	CRISPR spacer
tcgtacttttcgaaataaaattctactggct	Protospacer
* **.  *********.********* *** 

24. spacer 5.2|762754|31|NZ_CP012409|CRISPRCasFinder matches to MN882349 (Escherichia virus Ec_Makalu_003, complete genome) position: , mismatch: 7, identity: 0.774

tagtgaatttcgaaatgaaattctacaggca	CRISPR spacer
tcgtacttttcgaaataaaattctactggct	Protospacer
* **.  *********.********* *** 

25. spacer 5.2|762754|31|NZ_CP012409|CRISPRCasFinder matches to NZ_LT984809 (Cupriavidus taiwanensis isolate Cupriavidus taiwanensis STM 8555 plasmid I, complete sequence) position: , mismatch: 8, identity: 0.742

tagtgaatttcgaaatgaaattctacaggca	CRISPR spacer
ttgaaaatttcaaaatgaaattctgcagtgg	Protospacer
* * .******.************.***  .

26. spacer 6.1|771735|30|NZ_CP012409|CRISPRCasFinder matches to MH809530 (Lactobacillus phage Dionysus, complete genome) position: , mismatch: 8, identity: 0.733

aagagaaattggattcccaatttctacaga	CRISPR spacer
gccagaaattggattccaaagttctaacaa	Protospacer
.  ************** ** *****  .*

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 236879 : 242755 11 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_2 434040 : 492789 77 Staphylococcus_phage(72.31%) capsid,tail,holin,terminase,portal,plate,tRNA,head NA
DBSCAN-SWA_3 544142 : 552615 9 Synechococcus_phage(33.33%) NA NA
DBSCAN-SWA_4 563216 : 609782 39 Staphylococcus_phage(50.0%) transposase,holin,protease NA
DBSCAN-SWA_5 805485 : 819876 14 uncultured_Caudovirales_phage(50.0%) NA NA
DBSCAN-SWA_6 831855 : 839675 10 Pandoravirus(16.67%) NA NA
DBSCAN-SWA_7 1200507 : 1213414 21 Staphylococcus_phage(93.75%) terminase,coat,integrase attL 1196092:1196141|attR 1211830:1211879
DBSCAN-SWA_8 2303240 : 2387035 105 Staphylococcus_phage(85.33%) capsid,integrase,protease,terminase,tail,holin,portal,head attL 2312512:2312538|attR 2362277:2362303
DBSCAN-SWA_9 2450760 : 2499089 43 Staphylococcus_phage(82.35%) tRNA,protease NA
DBSCAN-SWA_10 2504608 : 2552109 46 Staphylococcus_phage(91.67%) transposase,protease,tRNA NA
DBSCAN-SWA_11 2754621 : 2762933 7 Caulobacter_phage(16.67%) tRNA NA
Click the colored protein region to show detailed information
Click the colored protein region to show detailed information
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
NZ_CP012409.1|WP_000990056.1|2361551_2361650_+|hypothetical-protein 2361551_2361650_+ 32 aa aa NA NA NA 2303240-2387035 yes
NZ_CP012409.1|WP_000681975.1|2361891_2362068_+|hypothetical-protein 2361891_2362068_+ 58 aa aa NA NA NA 2303240-2387035 yes