CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number
NZ_CP045801	Pseudomonas syringae USA011 plasmid pUSA011-2, complete sequence	0 crisprs	NA	0	0	1
NZ_CP045800	Pseudomonas syringae USA011 plasmid pUSA011-1, complete sequence	0 crisprs	NA	0	0	0
NZ_CP045799	Pseudomonas syringae USA011 chromosome, complete genome	4 crisprs	DEDDh,csa3,RT,cas3,DinG	3	1	8

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

8071 : 16239

Burkholderia_phage(28.57%)

integrase

attL 3787:3800|attR 27322:27335

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3787:3800	attL	NA	NA	NA	NA
WP_032611494.1\|8071_9034_+\|integrase	tyrosine-type recombinase/integrase	A0A166Y2G8	Gordonia_phage	3.3e-06	34.1
WP_024639835.1\|9059_9380_-	hypothetical protein	A0A2H4J9H6	uncultured_Caudovirales_phage	7.4e-16	51.0
WP_024639836.1\|9789_10179_+	hypothetical protein	NA	NA	NA	NA
WP_024639837.1\|10226_10538_-	XRE family transcriptional regulator	A0A0D5BHH6	Escherichia_phage	3.4e-21	51.5
WP_024639838.1\|11127_11769_-	SOS response-associated peptidase	C7BGE4	Burkholderia_phage	2.2e-35	38.2
WP_024639839.1\|12006_12294_-	hypothetical protein	NA	NA	NA	NA
WP_024639840.1\|12283_12934_-	AAA family ATPase	E5FFJ3	Burkholderia_phage	6.2e-17	32.2
WP_003348581.1\|13046_13247_-	hypothetical protein	NA	NA	NA	NA
WP_024639841.1\|13584_13995_-	hypothetical protein	NA	NA	NA	NA
WP_080393597.1\|14088_14376_-	hypothetical protein	NA	NA	NA	NA
WP_050586763.1\|14537_15836_-	Y-family DNA polymerase	I6RSM4	Salmonella_phage	2.0e-104	46.9
WP_024639843.1\|15813_16239_-	peptidase S24	A0A1W6JNS2	Morganella_phage	5.1e-12	31.6
27322:27335	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP045799

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP045799_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045799_1

322763-322909

Orphan

Consensus_repeat	Method
GCCAAGGCCGACGCACCCAAGGCTGAAGCAGCCAAG	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP045799_1

>merge|NZ_CP045799|1|322763-322909|PILER-CR
GCCAAGGCTGACGCACCCAAGCCGGAAGCTGCCAAGCCTGAGACTGCCAAGTCCGAAGCTGGCAAGGCTGACGCAGCCAAAGGCAAAGGCGAAGTCGCCAAGGCCGATGCAGGCAAAGCCGACGCATCCAAGGCTGAAGCAGCCAAG

>NZ_CP045799|1|1|322763-322909|PILER-CR
GCCAAGGCTGACGCACCCAAGCCGGAAGCTGCCAAG	CCTGAGACT
GCCAAGTCCGAAGCTGGCAAGGCTGACGCAGCCAAA	GGCAAAGGCGAAGTCGCCAAGGCCGATGCA
GGCAAAGCCGACGCATCCAAGGCTGAAGCAGCCAAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045799.1\|WP_024639238.1\|323024_325607_+\|glucans-biosynthesis-glucosyltransferase-MdoH	unknown	unknown	gnl\|CDD\|225494
NZ_CP045799.1\|WP_003316635.1\|333354_334974_-\|ubiquinone-biosynthesis-regulatory-protein-kinase-UbiB	unknown	unknown	gnl\|CDD\|235310
NZ_CP045799.1\|WP_024639240.1\|315920_316352_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225508
NZ_CP045799.1\|WP_003304589.1\|312042_312621_-\|lipocalin-family-protein	unknown	unknown	gnl\|CDD\|336958
NZ_CP045799.1\|WP_024640648.1\|326106_328050_-\|methyl-accepting-chemotaxis-protein	unknown	unknown	gnl\|CDD\|223910
NZ_CP045799.1\|WP_003316632.1\|332239_332515_-\|twin-arginine-translocase-TatA/TatE-family-subunit	unknown	unknown	gnl\|CDD\|234764
NZ_CP045799.1\|WP_003403068.1\|332894_333287_-\|phosphoribosyl-AMP-cyclohydrolase	unknown	unknown	gnl\|CDD\|234598
NZ_CP045799.1\|WP_003403097.1\|316660_319111_-\|glycogen/starch/alpha-glucan-phosphorylase	unknown	unknown	gnl\|CDD\|340853
NZ_CP045799.1\|WP_003341445.1\|313130_314141_-\|class-1-fructose-bisphosphatase	unknown	unknown	gnl\|CDD\|236458
NZ_CP045799.1\|WP_003414210.1\|319391_320363_+\|prolyl-aminopeptidase	unknown	unknown	gnl\|CDD\|130316
NZ_CP045799.1\|WP_024640649.1\|328252_330169_-\|methyl-accepting-chemotaxis-protein	unknown	unknown	gnl\|CDD\|223910
NZ_CP045799.1\|WP_002551631.1\|332559_332892_-\|phosphoribosyl-ATP-diphosphatase	unknown	unknown	gnl\|CDD\|179005
NZ_CP045799.1\|WP_003403102.1\|312624_312879_-\|outer-membrane-protein-assembly-factor-BamE	unknown	unknown	gnl\|CDD\|367908
NZ_CP045799.1\|WP_003403108.1\|310497_311862_+\|formimidoylglutamate-deiminase	unknown	unknown	gnl\|CDD\|236420
NZ_CP045799.1\|WP_024640650.1\|331758_332235_-\|Sec-independent-protein-translocase-subunit-TatB	unknown	unknown	gnl\|CDD\|166942
NZ_CP045799.1\|WP_161420743.1\|309582_310293_-\|histidine-utilization-repressor	unknown	unknown	gnl\|CDD\|188194
NZ_CP045799.1\|WP_003403071.1\|330257_330965_-\|16S-rRNA-(uracil(1498)-N(3))-methyltransferase	unknown	unknown	gnl\|CDD\|236959
NZ_CP045799.1\|WP_011266364.1\|330961_331762_-\|twin-arginine-translocase-subunit-TatC	unknown	unknown	gnl\|CDD\|182840
NZ_CP045799.1\|WP_024639242.1\|314275_315625_-\|DUF3999-domain-containing-protein	unknown	unknown	gnl\|CDD\|372507
NZ_CP045799.1\|WP_011266358.1\|320402_320840_+\|D-tyrosyl-tRNA(Tyr)-deacylase	unknown	unknown	gnl\|CDD\|235383

Protein	Function_ID	Function_description	E-value
NZ_CP045799.1\|WP_024639238.1\|323024_325607_+\|glucans-biosynthesis-glucosyltransferase-MdoH	gnl\|CDD\|225494	COG2943, MdoH, Membrane glycosyltransferase [Cell envelope biogenesis, outer membrane].	0
NZ_CP045799.1\|WP_003316635.1\|333354_334974_-\|ubiquinone-biosynthesis-regulatory-protein-kinase-UbiB	gnl\|CDD\|235310	PRK04750, ubiB, putative ubiquinone biosynthesis protein UbiB; Reviewed.	0
NZ_CP045799.1\|WP_024639240.1\|315920_316352_-\|hypothetical-protein	gnl\|CDD\|225508	COG2960, COG2960, Uncharacterized protein conserved in bacteria [Function unknown].	0.00727708
NZ_CP045799.1\|WP_003304589.1\|312042_312621_-\|lipocalin-family-protein	gnl\|CDD\|336958	pfam08212, Lipocalin_2, Lipocalin-like domain. Lipocalins are transporters for small hydrophobic molecules, such as lipids, steroid hormones, bilins, and retinoids. The structure is an eight-stranded beta barrel.	2.22772e-76
NZ_CP045799.1\|WP_024640648.1\|326106_328050_-\|methyl-accepting-chemotaxis-protein	gnl\|CDD\|223910	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms].	1.53755e-68
NZ_CP045799.1\|WP_003316632.1\|332239_332515_-\|twin-arginine-translocase-TatA/TatE-family-subunit	gnl\|CDD\|234764	PRK00442, tatA, twin-arginine translocase TatA/TatE family subunit.	1.26758e-50
NZ_CP045799.1\|WP_003403068.1\|332894_333287_-\|phosphoribosyl-AMP-cyclohydrolase	gnl\|CDD\|234598	PRK00051, hisI, phosphoribosyl-AMP cyclohydrolase; Reviewed.	1.05495e-79
NZ_CP045799.1\|WP_003403097.1\|316660_319111_-\|glycogen/starch/alpha-glucan-phosphorylase	gnl\|CDD\|340853	cd04300, GT35_Glycogen_Phosphorylase, glycogen phosphorylase and similar proteins. This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.	0
NZ_CP045799.1\|WP_003341445.1\|313130_314141_-\|class-1-fructose-bisphosphatase	gnl\|CDD\|236458	PRK09293, PRK09293, class 1 fructose-bisphosphatase.	0
NZ_CP045799.1\|WP_003414210.1\|319391_320363_+\|prolyl-aminopeptidase	gnl\|CDD\|130316	TIGR01249, Putative_proline_iminopeptidase, proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.	2.42253e-142
NZ_CP045799.1\|WP_024640649.1\|328252_330169_-\|methyl-accepting-chemotaxis-protein	gnl\|CDD\|223910	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms].	1.47735e-73
NZ_CP045799.1\|WP_002551631.1\|332559_332892_-\|phosphoribosyl-ATP-diphosphatase	gnl\|CDD\|179005	PRK00400, hisE, phosphoribosyl-ATP diphosphatase.	1.38836e-49
NZ_CP045799.1\|WP_003403102.1\|312624_312879_-\|outer-membrane-protein-assembly-factor-BamE	gnl\|CDD\|367908	pfam04355, SmpA_OmlA, SmpA / OmlA family. Lipoprotein Bacterial outer membrane lipoprotein, possibly involved in in maintaining the structural integrity of the cell envelope. Lipid attachment site is a conserved N terminal cysteine residue. Sometimes found adjacent to the OmpA domain (pfam00691).	1.87977e-06
NZ_CP045799.1\|WP_003403108.1\|310497_311862_+\|formimidoylglutamate-deiminase	gnl\|CDD\|236420	PRK09229, PRK09229, N-formimino-L-glutamate deiminase; Validated.	0
NZ_CP045799.1\|WP_024640650.1\|331758_332235_-\|Sec-independent-protein-translocase-subunit-TatB	gnl\|CDD\|166942	PRK00404, tatB, Sec-independent protein translocase subunit TatB.	4.04923e-61
NZ_CP045799.1\|WP_161420743.1\|309582_310293_-\|histidine-utilization-repressor	gnl\|CDD\|188194	TIGR02018, Histidine_utilization_repressor, histidine utilization repressor, proteobacterial. This model represents a proteobacterial histidine utilization repressor. It is usually found clustered with the enzymes HutUHIG so that it can regulate its own expression as well. A number of species have several paralogs and may fine-tune the regulation according to levels of degradation intermediates such as urocanate. This family belongs to the larger GntR family of transcriptional regulators. [Energy metabolism, Amino acids and amines, Regulatory functions, DNA interactions].	1.02498e-133
NZ_CP045799.1\|WP_003403071.1\|330257_330965_-\|16S-rRNA-(uracil(1498)-N(3))-methyltransferase	gnl\|CDD\|236959	PRK11713, PRK11713, 16S ribosomal RNA methyltransferase RsmE; Provisional.	3.35811e-66
NZ_CP045799.1\|WP_011266364.1\|330961_331762_-\|twin-arginine-translocase-subunit-TatC	gnl\|CDD\|182840	PRK10921, PRK10921, Sec-independent protein translocase subunit TatC.	1.8835e-116
NZ_CP045799.1\|WP_024639242.1\|314275_315625_-\|DUF3999-domain-containing-protein	gnl\|CDD\|372507	pfam13163, DUF3999, Protein of unknown function (DUF3999). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 440 and 470 amino acids in length. There is a single completely conserved residue D that may be functionally important.	1.49836e-146
NZ_CP045799.1\|WP_011266358.1\|320402_320840_+\|D-tyrosyl-tRNA(Tyr)-deacylase	gnl\|CDD\|235383	PRK05273, PRK05273, D-tyrosyl-tRNA(Tyr) deacylase; Provisional.	1.05964e-84

>NZ_CP045799.1|WP_011266358.1|320402_320840_+|D-tyrosyl-tRNA(Tyr)-deacylase
MKGLLQRVRSARVEVGTEVVGAIEQGILVLVGIEPQDTRASADKLLHKLLNYRVFSDVEGKMNLSLREVGGGLLLVSQFTLAADTKSGLRAGFSKAAPPALGAELFDYLLSQARIAHPTVAAGQFGADMQVHLINDGPVTFLFDT
>NZ_CP045799.1|WP_003414210.1|319391_320363_+|prolyl-aminopeptidase
MQTLYPQIKPYARHDLAVEQPHVLYVDESGSPEGLPVVFIHGGPGSGCDAHSRCYFDPNLYRIVTFDQRGCGRSTPHASLENNTTWKLVEDLEAIREHLGIDKWVLFGGSWGSTLALAYAQTHPDRVHAMILRGVFLARQQEIDWFYQAGASRLFPDYWQDYVAPIPLDERDNILAAFHKRLTGPDQIAQMHAAKAWSTWEGRCATLRPNPQVVDRFAEPHRALSIARIECHYFMNNAFLEDNQLIRDMPKIAHLPAIIVHGRYDVICPLDNAWELHQNWPGSELQVIREAGHSAAEPGIADALVRAAAEVARNLLDLPPEEA
>NZ_CP045799.1|WP_003403097.1|316660_319111_-|glycogen/starch/alpha-glucan-phosphorylase
MSQEPLVRDADVAAFRAAVLAKLTYSVGKDPDHAFEHDWFEAVALAARDHMVEHWMDHTRQIYRKVQKRVYYLSLEFLIGRLLYDSLSNLGLLEVAREALTELGVDIERIRLLEPDAALGNGGLGRLAACFMESMSTLGIAGHGYGIRYEHGLFRQGIVDGWQQEQTENWLDFGNPWEFERPEVVYSIGFGGSVDTVPTEAGDSRQVWRPGETVRAIAYDTPVVGWRGKSVNTLRLWRARAVEDLHLERFNAGDHFGAVAEVVRAESISRVLYPNDATEAGQELRLRQEYFFVSASLQDLLRRHLNQHATLTDLSEHAAIQMNDTHPSIAVAELMRQLIDNHNIPWDTAWKITVGTLGYTNHTLLPEALETWSVGLMERMLPRHMQIIYLINAQHIDTLRAKGVDDVNVLRAVSLIEEDNGRRVRMGNLAFLGSHSVNGVSALHTQLMRKTVFAELHKIYPERINNKTNGITFRRWLFQANPKLTEMLVESLGEDVLDNAETRLKELEPFAEKSSFRKQMADQRLHSKRALAAIIHERLGIAVNPAAMFDVQVKRIHEYKRQLLNLFHTVALYQAIRAEPGTDWVPRVKIFAGKAAASYHSAKLIIKLTNDIARTVNNDPTVRGLLKVVFMPNYNVSLAESIIPAADLSEQISTAGLEASGTSNMKFGLNGALTIGTLDGANVEMSEQVGLEHMFIFGMSSQQVEARKQAGEFSAHDDVAASGRLNDVLQAIRGGVFSPDDPNRYVGLIDQLLAYDRFLVCADFDSYWAAQAKVEERWHDSKEWWRSAVLNTARMGWFSSDRTIREYAGDIWKALE
>NZ_CP045799.1|WP_024639240.1|315920_316352_-|hypothetical-protein
MLWICLVVGGTALGYSLSYDEWAGALIGAVMGWAVWAGIRVRLLDRQSADQLQQLLATRESLDVLQQRLSALERQSAPGVPPAQDPAPLPLDAIIIEAPTDGPELIWDLPDEQPQAATPVEPAPQSLQPATTAKANPLDSAIS
>NZ_CP045799.1|WP_024639242.1|314275_315625_-|DUF3999-domain-containing-protein
MKIAVLGLALCTAITALAQDKPADFASQTPLSLSGQGPWYRIELPLAVQLNARQTDLSDVRVFNAEGQPQAYSIRPRQPAPEQEPTPIEVNWFALYSTQEAGDTAPVIRIERSSNGSVIEVQPQSDIEAGEEVLRGWLLDTSAIKAPLEQLVIDWSTEREGFQNFSIEASDDLQHWRNWGEGQVARLSFADEVVEQREVGLPGQSARYLRLLWRSPHSAPLLISAHLLSASSGTPASPLTWSPPVQGSVESPNEYVWQLPTGLPIGRVKIDIAQPNSLAPATLYGRLDAGQPWQPISSGLLYRLSQNNSDVLQDQLQLSGRIVQQLKLVVDDRGGGLGNEAPQLSVAVPATEVVFLARGDGPFTLAIGNPSVKAANLSLATLIPDLSAEKLATLGTASPATATVANMAAAPIAVPQGTDFKRLGLWAVLLLGVVFLGWMAFSTLRAAKR
>NZ_CP045799.1|WP_003341445.1|313130_314141_-|class-1-fructose-bisphosphatase
MSRVTLSRYLIEQTRSNNTPADLRFLIEVVARACKEISHAVSKGALGGVLGSMGTENVQGEVQKKLDVISNEILLEANEWGGHLAGMASEEMDNAYQIPGKYPKGAYLLVFDPLDGSSNIDINAPVGTIFSVLRCPNEYLSQNEALNEKAFLQPGTEQVAAGYAIYGPQTMLVLTLGDGVKGFTLDREMGSFVLTHEDITIPESTQEFAVNMSNQRHWEAPVQRYVSELLAGEDGPLKKNYNMRWVAAMVADVHRILTRGGLFMYPRDSREPSKPGKLRLMYEANPMSFLVEQAGGASTDGHQRILDIQPEGLHQRVAVYLGSKEEVERATAYHKA
>NZ_CP045799.1|WP_003403102.1|312624_312879_-|outer-membrane-protein-assembly-factor-BamE
MSLRSVALLSFCVLLAACSKITQENYSKLSAGMPKAQVESLLGSPTECSGALGMSSCTWGDQNTFISVQYAADKVVLFSGQGLK
>NZ_CP045799.1|WP_003304589.1|312042_312621_-|lipocalin-family-protein
MIKVLVRFGICVMASFLAIGFAHSADNLEPKTVDSVDLKQYQGTWYEIARLPMFFQRKCAQSEARYTLKDDGNIAVTNRCRTIEGKWEEATGTASPQVPGKTDKLWVVFDNWFSRLLPSVAKGDYWILDVSEGYRTAVVGNPDRKYLWLLSRTPTVSASVREDMLSKARQQGYDTSRLIWREDDSKIGKGEK
>NZ_CP045799.1|WP_003403108.1|310497_311862_+|formimidoylglutamate-deiminase
MSAFFAERALLPDGWARNVRLEVGQDGILTRVEANADQQGAEKVSGPLLPGMPNLHSHAFQRAMAGLAEVAGNPNDSFWTWRDLMYRLVGRISPQQLGVIARQLYIEMLKGGYTSVAEFHYVHQDSDGKPYADPAELALQISQAAASVGIGLTLLPVLYSHSGFGGQAPNEGQRRFIHSTDSYLDLQARLRPVLAAQPAQQPGLCFHSLRAVTPQQISEVLAASDRQCPVHIHIAEQQKEVDDCLSWSGRRPLQWLYENAPVDNRWCLVHATHAEADEVALMAQSGAVAGLCLTTEANLGDGIFPAVDYIAQGGRWGIGSDSHVSLSVVEELRWLEYGQRLRDQRRNRLYRSDQPMVGRTLYDAALAGGAQALGQQIGTLQVGHRADWLVLDGNDPYIATASDDAILNRWLFAGSDRQIRDVAVNGRWVIREGRHAAEEQSNREFAQVLRALLG
>NZ_CP045799.1|WP_161420743.1|309582_310293_-|histidine-utilization-repressor
MGESPAPLYARVKQMIALQIQNGTWPPHHRVPSESELVTQLGFSRMTINRALRELTAEGLLVRMQGVGTFVAEPKSQSALFEVHNIADEIAARGHRHTCKVMVLKEEAAGSERALALDMREGQRVFHSLIVHYENDIPVQIEDRFVNAQVAPDYLRQDFTLQTPYAYLSQVAPLTEGEHVVEAILAEADECRLLQIEAGEPCLLIRRRTWSGRQPVTAARLIHPGSRHRLEGRFTK
>NZ_CP045799.1|WP_024639238.1|323024_325607_+|glucans-biosynthesis-glucosyltransferase-MdoH
MSNSLPVPMSLNEYLAHLPMSDEQRAELAGCTTFAELHERLSAQPVTDPAEAAQASVGRRLTLTTADQLEDAEMLGVDASGRLCLKATPPIRRTKVVPEPWRTNILVRGWRRLTGKGNPPKPEHDDLPRDLPKARWRTVGSIRRYILLILMLGQTIVAGWYMKGILPYQGWSLVSLDEITRQTFVQTALQVMPYALQTSILLLFGILFCWVSAGFWTALMGFLELLTGRDKYRISGASAGNEPIEKGARTALVMPICNEDVPRVFAGLRATFESVAATGDLDRFDFFVLSDTNETDIAVAEQQAWLDVCRETKGFGKIFYRRRRRRVKRKSGNLDDFCRRWGGDYRYMVVLDADSVMSGECLTSLVRLMEATPDAGIIQTAPRASGMDTLYARMQQFATRVYGPLFTAGLHFWQLGESHYWGHNAIIRMKPFIEHCALAPLPGKGAFAGAILSHDFVEAALMRRAGWGVWIAYDLPGSYEELPPNLLDELKRDRRWCHGNLMNFRLFLVKGMHPVHRAVFLTGVMSYLSAPLWFFFLVLSTALLAVNTLMEPTYFLEPRQLYPLWPQWHPEKAVALFSTTIVLLFLPKLLSVILIWAKGAKGFGGKFKVTISMLLEMLFSVLLAPVRMLFHTRFVLAAFLGWAATWNSPQRDDDSTPWIEAVKRHGPQTLLGACWALLVFWLNPSFLWWLAPIVVSLMLSIPVSVISSRTNLGVKARDEKFFLIPEEFEPPQELISTDRYTYENRWHALKQGFIRAVVDPRQNALACALATSRHRQAQPIEVVRMERVDQALKVGPAKLGNQERLMLLSDPVALGRLHERVWSEGHEEWLAAWRASIEADPHAPLLPLQPVGKASEPVPV
>NZ_CP045799.1|WP_024640648.1|326106_328050_-|methyl-accepting-chemotaxis-protein
MFRLINQALGNMNVRFKLSLGFGLVLLLTLIITLTGWHGLYTMIDRSESLSDIAQLNGLTKDLRAERITDRVQKTPESTALVTEKLNEMKAQLTLLHKQSDEEATIKLLNGQFETLNRIEKTFADVRDNRQTRNQIRTRLEQTSEQALQAIAQVEVEVLKSVSQEQDSSERMEEFTNISQLRQQVQTARYQVQTYTFTTRDADESAAIAAIDEALKEIGQIAQDQGNESLQGLTTATAALQSYRERLGEFKQIQTKAEADQEVMEGLGAALLDSVAALNRLQTEQRDSEAANSSAMLSSVAGLALLIGLLAAWIMTRQITVPLQQTLIAAARIAQGDLSRDISVTRRDEMGQLQGSMQTMTVSLRELVGGISEGVSQIASAAEQLSAVTKQTCIGVTSQKDETDQVATAMNEMAATVQEVARNAQEASQAAAQADQQARSGDEVVGQAITQIEQLAREVLNSTQSMSALKQESNKIVGVLDVIKSVSQQTNLLALNAAIEAARAGEAGRGFAVVADEVRGLAQRTQKSTEEIEELIAALQTGTQQVATTLDSSRTLTDNTVELSRRAGGALEQITRTVATIQHMNEQIATASEEQSVVAEQINRNVISVRDISEQTAAASEQTAASSVELARLGTHLQTLVGKFRVG
>NZ_CP045799.1|WP_024640649.1|328252_330169_-|methyl-accepting-chemotaxis-protein
MSRGLSKSLANASVSLKLAIGFGLVLLMTLMISATGWFSNQALIDRGDRVTAIAEVNELTLQLRINRMSYEVLYNAETAAKVRSTLDELDAALQTARNLLRSPENLQLLDVQIQATRDYRQSFEDMSKAIDTREASRSQMGENADKAVDQANRIEAELLKEDNILAFNGIVGVSKLIQQARFQVRGYTYSGRPDFEKDANKAIDDAVTGINTLAGDISSTYSPMLQQAIAGLNGYRAAVGKYRDAQAASKAALDKMTTLGVSMLATSNDLITRQNKSRDADSAKSVQMIIAATALAMVLGILAAWVITRQITTPLQETLEVVERVASGDLSRNLKVDRKDELGKLQATIQRMTVSLRELVGGIRDGVTQIASAAEELSAVTEQTSAGVNSQKVETDQVATAMHEMTATVQEVARNAEEASEAAVTADRQARDGERVVNEAIAQIERLASAVGNSSEAMGALKQESDKIGSVLDVIKSVAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRSLAQRTQKSTEEIEALIARLQSGTQQATTVMDSSRELSTSSVELTRRAGGSLANITKTVSSIQAMNQQIAAAAEEQSATAEEINRSIINVRDVSEQTSAASEETAASSVELARLGNHLQVLVSRFTV
>NZ_CP045799.1|WP_003403071.1|330257_330965_-|16S-rRNA-(uracil(1498)-N(3))-methyltransferase
MNLLLLEEADFIAADRVVLRDRRLKHMQEVHRAEVGDSVRVGRVNGLLGNAELLRLELHEAELRVELQSAPPAKLPLTLLLALPRPKMLRRVFQTVATMGVPKVILLNSYRVEKSFWQTPFLEPEAIREQLILGLEQARDSVLPEIVIEKRFKPFVEDRLPQIALDTLALVGHPGDFPACPRAVTQPVTLAIGPEGGWIPYEIDLLRQSGLQPVQLGERILRVETAVTALLARLF
>NZ_CP045799.1|WP_011266364.1|330961_331762_-|twin-arginine-translocase-subunit-TatC
MSADTPENDQQMPLISHLTELRTRLLRCVAAVFLIFAGLFYFTQKIYTLVSAPLRVYLPEGATMIATDVASPFITPFKLTMMVALFLSMPVILHQIWGFIAPGLYKHEKRVAVPLLVSSIILFYAGMAFAYFLVFPLIFHFFASVTPEGVSMMTDIASYLDFVMTLFFAFGVAFEIPVAVVLLVWIGIVDVKYLKKIRPYVIIGCFVVGMILTPPDIFSQTLLAVPMWLLFELGVLCSTMIKKRGEHPDDEAEDADKQDQPPATTP
>NZ_CP045799.1|WP_024640650.1|331758_332235_-|Sec-independent-protein-translocase-subunit-TatB
MFGISFSELLLVGLVALLVLGPERLPGAARTAGLWIGRLKRSFNAIKQEVEREIGADEIRRQLHNEHILSMEDEARKMFAPNQPSENSPEPANPPPAPAAAEAASPVHDQAAHHEIGPAQPAAPKTELSLEKTAKPADAGTPVPAPPAHDSSLPPRAP
>NZ_CP045799.1|WP_003316632.1|332239_332515_-|twin-arginine-translocase-TatA/TatE-family-subunit
MGIFDWKHWIVILIVVVLVFGTKKLKGLGSDVGESIKGFRKAMNDDDKPAEQPAPQPQQAQPAPQGSPLNQPHTIDAQAHKVDEPIRKDQV
>NZ_CP045799.1|WP_002551631.1|332559_332892_-|phosphoribosyl-ATP-diphosphatase
MTDTLSRLAEVLESRKDAAADSSYVASLYHKGLNKILEKLGEESIETIIAAKDAAVSGDCSDVIYETADLWFHSMVMLAALGQHPQAVLDELDRRFGLSGHAEKAARTAE
>NZ_CP045799.1|WP_003403068.1|332894_333287_-|phosphoribosyl-AMP-cyclohydrolase
MKDWLDEIHWNSDGLVPAIAQDHKTGRVLMMAWMNREALSLTAAENRAIYWSRSRGKLWRKGEESGHVQKLHELRLDCDADVIILMVEQIGGIACHTGRESCFYRVYEKSGWKTVDPVLKDPDAIYPAGH
>NZ_CP045799.1|WP_003316635.1|333354_334974_-|ubiquinone-biosynthesis-regulatory-protein-kinase-UbiB
MKLLAVRRLFRIQRVVIRYRLDDLLFALPLPWWMLALRFVLPWRWLPRRKSELSRGVRFRLALQDLGPIFIKFGQLLSTRRDLLPEDIADELMLLQDRVPPFDQQLAIKLIEEQLGARICDVFSRFDEKPLASASVAQVHAACLKTGEEVVVKVVRPGLKPIIGQDLAWLFILARTAERVSADARLLHPVQVVMDYEKTIYDELDLLREAANASQLRRNFEGSDLLYVPQVYWDWCRPKVLVMERIYGLQVTDMAGLADQRTDMKLLAERGVEIFFTQIFRDSFFHADMHPGNIFVSTVNPWAPKYIAIDCGIVGSLTPEDQDYLARNLFAFFKRDYRRVAQLHIDSGWVPAETKLNEFEAAIRTVCEPIFEKPLKDISFGQVLMRLFQTARRFNMEVQPQLVLLQKTLLNIEGLGRQLYPELDLWSTAQPYLERWMRERVSPKTLLGNLQSQVEQLPHIAGMTRDLLERMSRPHASDPPRPWHDRKDEPVLRLIGAALLVGGAIQGWVMSEAATQLLTLTAWPAAIMLIAGLYLIVRR

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP045799_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045799_2

536999-537087

Orphan

Consensus_repeat	Method
TTCTGCCCGAAGGGCGTAGGAGCGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP045799_2

>merge|NZ_CP045799|2|536999-537087|CRISPRCasFinder
TTCTGCCCGAAGGGCGTAGGAGCGACCGGGGCGGCGATCCGCATTGTTCGCGAAAGGGCTTGGCTTCTGCCCGAAGGGCGTAGGAGCGA

>NZ_CP045799|2|1|536999-537087|CRISPRCasFinder
TTCTGCCCGAAGGGCGTAGGAGCGA	CCGGGGCGGCGATCCGCATTGTTCGCGAAAGGGCTTGGC
TTCTGCCCGAAGGGCGTAGGAGCGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045799.1\|WP_024640317.1\|537257_538547_+\|putative-hydroxymethylpyrimidine-transporter-CytX	unknown	unknown	gnl\|CDD\|274096
NZ_CP045799.1\|WP_003402864.1\|538515_539262_-\|DUF3298-domain-containing-protein	unknown	unknown	gnl\|CDD\|378702
NZ_CP045799.1\|WP_003346798.1\|531388_531721_-\|multidrug-SMR-transporter	unknown	unknown	gnl\|CDD\|137367
NZ_CP045799.1\|WP_002551796.1\|540077_540530_+\|DUF1249-domain-containing-protein	unknown	unknown	gnl\|CDD\|225693
NZ_CP045799.1\|WP_161633373.1\|545696_546176_+\|TIGR02281-family-clan-AA-aspartic-protease	unknown	unknown	gnl\|CDD\|131334
NZ_CP045799.1\|WP_003404692.1\|528359_529316_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045799.1\|WP_003431952.1\|542779_544684_+\|DNA-topoisomerase-IV-subunit-B	unknown	unknown	gnl\|CDD\|235501
NZ_CP045799.1\|WP_024640320.1\|524107_524746_-\|toluene-tolerance-protein	unknown	unknown	gnl\|CDD\|270690
NZ_CP045799.1\|WP_011266483.1\|542085_542703_+\|alpha/beta-fold-hydrolase	unknown	unknown	gnl\|CDD\|225692
NZ_CP045799.1\|WP_003402876.1\|544680_545658_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379191
NZ_CP045799.1\|WP_003402866.1\|539469_540087_+\|NUDIX-domain-containing-protein	unknown	unknown	gnl\|CDD\|182682
NZ_CP045799.1\|WP_024640319.1\|529352_530168_-\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381321
NZ_CP045799.1\|WP_011266478.1\|533204_534644_-\|TolC-family-outer-membrane-protein	unknown	unknown	gnl\|CDD\|273829
NZ_CP045799.1\|WP_011266482.1\|541190_541997_+\|3',5'-cyclic-AMP-phosphodiesterase	unknown	unknown	gnl\|CDD\|182997
NZ_CP045799.1\|WP_003404694.1\|530164_531340_-\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|223651
NZ_CP045799.1\|WP_024640318.1\|531790_533071_+\|3-deoxy-D-manno-octulosonic-acid-transferase	unknown	unknown	gnl\|CDD\|235589
NZ_CP045799.1\|WP_003402862.1\|535070_536960_+\|phosphomethylpyrimidine-synthase-ThiC	unknown	unknown	gnl\|CDD\|236451
NZ_CP045799.1\|WP_003404685.1\|526792_528217_+\|bifunctional-D-glycero-beta-D-manno-heptose-7-phosphate-kinase/D-glycero-beta-D-manno-heptose-1-phosphate-adenylyltransferase-HldE	unknown	unknown	gnl\|CDD\|183085
NZ_CP045799.1\|WP_003404683.1\|524861_526664_+\|lipid-A-export-permease/ATP-binding-protein-MsbA	unknown	unknown	gnl\|CDD\|131258
NZ_CP045799.1\|WP_024640316.1\|540728_541103_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP045799.1\|WP_024640317.1\|537257_538547_+\|putative-hydroxymethylpyrimidine-transporter-CytX	gnl\|CDD\|274096	TIGR02358, purine-cytosine_transport_protein, putative hydroxymethylpyrimidine transporter CytX. On the basis of a phylogenomic study of thiamine biosythetic, salvage, and transporter genes and a highly conserved RNA element THI, this protein family has been identified as a probable transporter of hydroxymethylpyrimidine (HMP), the phosphorylated (by ThiD) form of which gets joined (by ThiE) to hydroxyethylthiazole phosphate to make thiamine phosphate. [Transport and binding proteins, Nucleosides, purines and pyrimidines, Biosynthesis of cofactors, prosthetic groups, and carriers, Thiamine].	1.31489e-107
NZ_CP045799.1\|WP_003402864.1\|538515_539262_-\|DUF3298-domain-containing-protein	gnl\|CDD\|378702	pfam11738, DUF3298, Protein of unknown function (DUF3298). This family of bacterial protein C-terminal regions is highly conserved but the function is not known. Several members are annotated as being endo-1,4-beta-xylanase-like, but this could not be confirmed, and the structure can be defined as a heat-shock cognate 70kd protein 44kd ATPase.	2.63538e-06
NZ_CP045799.1\|WP_003346798.1\|531388_531721_-\|multidrug-SMR-transporter	gnl\|CDD\|137367	PRK09541, emrE, EmrE family multidrug efflux SMR transporter.	4.03121e-28
NZ_CP045799.1\|WP_002551796.1\|540077_540530_+\|DUF1249-domain-containing-protein	gnl\|CDD\|225693	COG3151, COG3151, Uncharacterized protein conserved in bacteria [Function unknown].	1.97309e-55
NZ_CP045799.1\|WP_161633373.1\|545696_546176_+\|TIGR02281-family-clan-AA-aspartic-protease	gnl\|CDD\|131334	TIGR02281, Uncharacterized_protein_RP867, clan AA aspartic protease, TIGR02281 family. This family consists of predicted aspartic proteases, typically from 180 to 230 amino acids in length, in MEROPS clan AA. This model describes the well-conserved 121-residue C-terminal region. The poorly conserved, variable length N-terminal region usually contains a predicted transmembrane helix. Sequences in the seed alignment and those scoring above the trusted cutoff are Proteobacterial; homologs scroing between trusted and noise are found in Pyrobaculum aerophilum str. IM2 (archaeal), Pirellula sp. (Planctomycetes), and Nostoc sp. PCC 7120 (Cyanobacteria). [Protein fate, Degradation of proteins, peptides, and glycopeptides].	1.89125e-48
NZ_CP045799.1\|WP_003431952.1\|542779_544684_+\|DNA-topoisomerase-IV-subunit-B	gnl\|CDD\|235501	PRK05559, PRK05559, DNA topoisomerase IV subunit B; Reviewed.	0
NZ_CP045799.1\|WP_024640320.1\|524107_524746_-\|toluene-tolerance-protein	gnl\|CDD\|270690	cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphotransferase and Choline Kinase family. This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves as precursors to the synthesis of important biological compounds, such as the major phospholipids, phosphatidylcholine and phosphatidylethanolamine and the amino acids, threonine, methionine, and isoleucine. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K).	3.53687e-05
NZ_CP045799.1\|WP_011266483.1\|542085_542703_+\|alpha/beta-fold-hydrolase	gnl\|CDD\|225692	COG3150, COG3150, Predicted esterase [General function prediction only].	1.83921e-71
NZ_CP045799.1\|WP_003402876.1\|544680_545658_+\|hypothetical-protein	gnl\|CDD\|379191	pfam13449, Phytase-like, Esterase-like activity of phytase. This is a repeated domain that carries several highly conserved Glu and Asp residues indicating the likelihood that the domain incorporates the enzymic activity of the PLC-like phospho-diesterase part of the proteins.	9.71175e-09
NZ_CP045799.1\|WP_003402866.1\|539469_540087_+\|NUDIX-domain-containing-protein	gnl\|CDD\|182682	PRK10729, nudF, ADP-ribose pyrophosphatase NudF; Provisional.	5.32812e-71
NZ_CP045799.1\|WP_024640319.1\|529352_530168_-\|aldo/keto-reductase	gnl\|CDD\|381321	cd19095, AKR_PA4992-like, Pseudomona aeruginosa PA4992 and similar proteins. Pseudomona aeruginosa PA4992 is the prototype of this family. It is a putative aldo-keto reductase that catalyzes the reversible reduction of ketones to the respective alcohols using NAD(P)H as a hydride donor.	5.2696e-79
NZ_CP045799.1\|WP_011266478.1\|533204_534644_-\|TolC-family-outer-membrane-protein	gnl\|CDD\|273829	TIGR01844, Proteases_secretion_protein_PrtF, type I secretion outer membrane protein, TolC family. Members of this model are outer membrane proteins from the TolC subfamily within the RND (Resistance-Nodulation-cell Division) efflux systems. These proteins, unlike the NodT subfamily, appear not to be lipoproteins. All are believed to participate in type I protein secretion, an ABC transporter system for protein secretion without cleavage of a signal sequence, although they may, like TolC, participate also in the efflux of smaller molecules as well. This family includes the well-documented examples TolC (E. coli), PrtF (Erwinia), and AprF (Pseudomonas aeruginosa). [Protein fate, Protein and peptide secretion and trafficking, Transport and binding proteins, Porins].	2.05461e-113
NZ_CP045799.1\|WP_011266482.1\|541190_541997_+\|3',5'-cyclic-AMP-phosphodiesterase	gnl\|CDD\|182997	PRK11148, PRK11148, cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional.	1.03205e-96
NZ_CP045799.1\|WP_003404694.1\|530164_531340_-\|FAD-dependent-oxidoreductase	gnl\|CDD\|223651	COG0578, GlpA, Glycerol-3-phosphate dehydrogenase [Energy production and conversion].	1.19152e-56
NZ_CP045799.1\|WP_024640318.1\|531790_533071_+\|3-deoxy-D-manno-octulosonic-acid-transferase	gnl\|CDD\|235589	PRK05749, PRK05749, 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed.	0
NZ_CP045799.1\|WP_003402862.1\|535070_536960_+\|phosphomethylpyrimidine-synthase-ThiC	gnl\|CDD\|236451	PRK09284, PRK09284, thiamine biosynthesis protein ThiC; Provisional.	0
NZ_CP045799.1\|WP_003404685.1\|526792_528217_+\|bifunctional-D-glycero-beta-D-manno-heptose-7-phosphate-kinase/D-glycero-beta-D-manno-heptose-1-phosphate-adenylyltransferase-HldE	gnl\|CDD\|183085	PRK11316, PRK11316, bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE.	0
NZ_CP045799.1\|WP_003404683.1\|524861_526664_+\|lipid-A-export-permease/ATP-binding-protein-MsbA	gnl\|CDD\|131258	TIGR02203, Lipid_A_export_ATP-binding/permease_protein_msbA., lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes. [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides, Transport and binding proteins, Other].	0

>NZ_CP045799.1|WP_003402862.1|535070_536960_+|phosphomethylpyrimidine-synthase-ThiC
MSIKAKNAAHLSESAQVDSGSVQPFTRSQKIYVQGSRPDIRVPMREITLDVTPTDFGGEINAPVTVYDTSGPYTDPNVIIDVRKGLADVRSPWIDSRNDTERLPGLSSNFGQQRLSDAELTALRFAHVRNPRRAKAGANVSQMHYARQGIITAEMEYVAIRENMKLQEARAAGLLTQQHAGHSFGASIPKEITAEFVREEIARGRAIIPANINHVELEPMIIGRNFLVKINGNIGNSALGSSIEEEVAKLTWGIRWGSDTVMDLSTGKHIHETREWIIRNSPVPIGTVPIYQALEKVGGAAEDLTWELFRDTLIEQAEQGVDYFTIHAGVLLRYVPLTAKRVTGIVSRGGSIMAKWCLAHHKENFLYTHFEDICEIMKAYDVSFSLGDGLRPGSIADANDAAQFGELETLGELTKIAWKHDVQTMIEGPGHVPMQLIKENMDKQLECCDEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGCAMLCYVTPKEHLGLPNKDDVKTGIITYKIAAHAADLAKGHPGAQIRDNALSKARFEFRWEDQFNLGLDPDTARSYHDETLPKDSAKVAHFCSMCGPKFCSMKITQEVREYAANQRIDAVDVDVAKGLAEQAERFKQEGSQLYKKV
>NZ_CP045799.1|WP_011266478.1|533204_534644_-|TolC-family-outer-membrane-protein
MLRKLSLVVAVSFASSGLTWAAELPMPTQTGLLSVYQQAVDNNADLAASRADYDARKEAVPQARAGLLPNISGSAQNSSTRTSIDQPRAVASRSGNLYQATLSQPIFRADRWFQLQAAEASNEQAALELSATEQNLILQSAQSYFSVLRAQDNLASTKAEEAAFKRQLDQANERFDVGLSDKTDVLQAQASYDTSRASRLIAQRQVEDAFQALVTLTNREYNSIEGIVHTLPVLAPTPNDAKAWVDTAAQQNLNLLASNYAVNAAEETLRQRKAGHAPTLDAVATYQRGDNDALGFSNPNYTGRNYGGDVEQRSIGVQLNIPIYSGGLTSSQVREAYARLSQSEQRRESLRRQVVENTRNLHRAVNTDVEQVQARKQSIISNQSALEATEIGYQVGTRNIVDVLDAQRQLYASVRDYNNTRYDYILDNLRLKQAAGTLNPGDLQDLSRYLKADYNPDKDFLPPDLATAAQKNFERPAKR
>NZ_CP045799.1|WP_024640318.1|531790_533071_+|3-deoxy-D-manno-octulosonic-acid-transferase
MNRTLYTVLFHLGLPLVALRLWLRARKAPAYRQRIGERFARGLPVMQRGGIWVHAVSVGESIAAAPMIRSLLVQYPQLPITVTCMTPTGSERIKALFASELRIQHCYLPYDLPWAAARFLDQVQPRLGIIMETELWPNHIHQCSLRGIPVVLANARLSERSARGYARFACLTRPMLAEMAWFAVQTEAEAQRFRDLGARPECVAVTGSIKFDLSIDPQLLERAAQQREQWQTTQRPVWIAASTHAGEDESVLAAHRTLLTSHPDALLILVPRHPERFDSVHALCQQQGFATVRRSTAQAVTADVSVMMGDTMGELLFLYALADIAFVGGSLVPNGGHNLLEPAALAMPVLSGPHLFNFLEIAAMLRKAGALQEVNDAAALATAVQGLFDQPQQARNMADAGLAVMKANQGALQRLLDGIGRLMGRR
>NZ_CP045799.1|WP_003346798.1|531388_531721_-|multidrug-SMR-transporter
MNAYYLLAIAVCAEVIATTSMKAVKGFSTPLPLVLLITGYAIAFWMLILVMRTIPVGITYAIWSGMGIVMVSIAAFFIYGQKLDLPALLGMGMIVAGVAVIQLFSKTAGH
>NZ_CP045799.1|WP_003404694.1|530164_531340_-|FAD-dependent-oxidoreductase
MPSVISTDVLIVGAGVAGLWLNARLRRQGFSTVLVESASLGGGQSLKSQGIIHGGAKYALHGALSGASEAIADMPRRWREALDGKGELDLSGVRLLSEAHYLWSPGTIAGNLTSFFASKAVRGRVDQVKGEQLPPALQNPKFKGKVYRLAELVVDVPSLITRLAELAGDSLLAGQHIEPLFEGDELIGLRVDGRDIHAQRIVLSAGGGNADLLNALGVSQPQMQRRPLHMVLVKGPTLKPLYAHCLGGGPKPRITVTTHPAADGQWVWYLGGDLAEADGVARQPDAQIAVARKELEALLPWVDLSQAQWATLRVDRAEPAQSGLVRPDNAFLDSQQRLMIGWPTKLALAPDFADRVLSQLSRDGIHPTPQAALSDVPRPPMAIPVWDELLP
>NZ_CP045799.1|WP_024640319.1|529352_530168_-|aldo/keto-reductase
MSLKTLHDLHRPLGSTGLNVSPLGLGTVKLGRDQGVKYPSGFRIPDDQQAQMLLRMARDMGINLIDTAPAYGTSEERLGPLLRGQRQDWVIVSKVGEEFANGESSHDFSAAHTRTSVERSLKRLETDFLDLVLVHSDGNDLAILNDAEVYQTLADLKREGKIRGFGFSGKTVEGGLLALREGDCAMVTYNLNEQDEKPVLDYAQAHGKGILVKKALASGHVCLTAGTDPVHASFQLLFEHPAVASAIVGTINPLHLAHNVATAAAVICRQA
>NZ_CP045799.1|WP_003404692.1|528359_529316_-|hypothetical-protein
MPRTLIRKNPSNFKTLPLFVEATPESLSYQSVGMPMNFAQTLQRRRKIDVPDTERFATELANLGVSVRLTVSWQNRDYWVLVRQRRQDRGDVVLKLISGYVPAHELTLPLHTAIQEVAEECLIETPQGWLSGLFKETWLPAPYAAALHYREAMPFRLSPLSGAARPVRTGSLTLLERPRAYVHLPTASLQLIYDMRLEIPKEARPVSLFHVDEALENDQLVARLNRSKPDLYLMPLENGAPLPELYTLKRDKLIPAGTRGLYLAESFAAQDGWVVREERIRWKDWLRQQGMAPPAKKSGLKRLTGKARELLHSISGKL
>NZ_CP045799.1|WP_003404685.1|526792_528217_+|bifunctional-D-glycero-beta-D-manno-heptose-7-phosphate-kinase/D-glycero-beta-D-manno-heptose-1-phosphate-adenylyltransferase-HldE
MKLSMPRFDQAPVLVVGDVMLDRYWHGGTSRISPEAPVPVVKVDQIEDRPGGAANVALNIAALGAPASLVGVTGDDEAAESLTNSLKAAGVLARFQRIADQPTIVKLRVMSRHQQLLRIDFEEPFRTDPLALSAEVYSLLDGIKVLVLSDYGKGALKNHQALIQAARKRGIPVLADPKGKDFAIYRGASLITPNLSEFEAIVGHCVDEAQLVTKGAQLMQELDLGALLVTRGEHGMTLLRPDQQALHLPARAREVFDVTGAGDTVISTLAAAIAAGEELPHAVALANLAAGIVVGKLGTAAISAPELRRAIQREEGSERGVLGLEQLLLAVDDARAHKERIVFTNGCFDILHAGHVTYLEQARALGDRLIVAVNDDASVSRLKGPGRPINSVERRMAVLAGLGAVDWVISFPEGTPENLLTHVKPDVLVKGGDYGVDQVVGADIVQAYGGEVRVLGLVENSSTTAIVEKIRGQG
>NZ_CP045799.1|WP_003404683.1|524861_526664_+|lipid-A-export-permease/ATP-binding-protein-MsbA
MTTSESSATSSVKIYFRLLSYVRPYVGIFLLSIIGFVIFASTQPMLAGILKYFVDGLTNPEAVLFPNVPYLRELQLLQAVPLLIVLIAAWQGLGSFLGNYFLAKVSLGLVHDLRVELFNKLLVLPNRYFDTTNSGHLISRITFNVTMVTGAATDAIKVVIREGLTVVFLFIYLLMMNWKLTLVMLAILPLIAVMVGTASKKFRKQSKKIQVAMGDVTHVASETIQGYRVVRSFGGEAYEQARFAQASNSNTQKQLRMTKTGAIYTPMLQLVIYSAMAVLMFLVLFLRGEATAGDLVAYITAAGLLPKPIRQLSEVSSTIQKGVAGAESIFEQLDVEEEVDTGTIERERVTGHLEVKNLSFFYPQTARQVLNDISFSAAPGQMIALVGRSGSGKSTLANLIPRFYGHDIGNILLDGVEINDYRLRNLRRHIAQVNQNVTLFNDTIANNIAYGDLAGAPRADIEAAAADAYAKEFIDQLPQGFDTQVGENGVLLSGGQRQRLAIARALLKNAPLLILDEATSALDTESERHIQAALDHVMKGRTTLVIAHRLSTIEKADLILVMDAGQIVERGTHTELLAQNGYYARLHAMGLDEPAPVGAV
>NZ_CP045799.1|WP_024640320.1|524107_524746_-|toluene-tolerance-protein
MQALDHAHYLERVQGAEVLEADGTGDKVLRLRDGSMLKLFRRKRLVSSAAWYPYAQRFADNCETLARRGIPCPRIRSVSRIAEIERDAVHYDPLAGFTLRQLLGSAVADDKLRRQLGSFIAGLHEKGIYFRSAHLGNVILTPEGSLGLIDIADMKTYRRALRKSLRLRNFKHMLRYQEDRQWLLDNGNPAFLDGYMSAQTLCDTSELAQAVQ
>NZ_CP045799.1|WP_024640317.1|537257_538547_+|putative-hydroxymethylpyrimidine-transporter-CytX
MNTPGTYSPDTPVPASQRVFGGRDLFSLWFSLGIGLMVLQTGALLAPGLGMSGSMLAIFLGTLVGVLLLASVGVIGSDTGLSSMAALKLSLGSKGASLPAVLNLLQLIGWGSFEIIVMRDAASLLGARAFAEGSLWSSPLLWTLLFGALATLLAVSGPLTFVRRFLRKWGLWILLTACAWLTWNLLAKADLTALWATSGDGSLPFASGFDIAIAMPLSWLPLIADYSRFGQRAKSVFAGTATGFFIGNFWLMSLGVAYTLAFAPSGEVNALLLALAGAGLGIPLLLILLDETENAFADIHSAAVSSALLSRIKVEYLALVIGVICTLIACLAPLAQYQNFLLLIGSVFAPLFGVVLVDHFILRGRSGQAAEGGLRWMSLLAWLGGLSTYHLLANLYPEVGATLPALIVAGVLQLLIGGTINRGRGTVPA
>NZ_CP045799.1|WP_003402864.1|538515_539262_-|DUF3298-domain-containing-protein
MSLLRITSLACLALLLGACQSLFTPNMRTPLQVQRDASELIKPGCTTADCPLVNIDTVHFPDEPRLDAIVQKTLLQLTVADSSASPPASIKAYQEQFLSQAQGRNASYLQAKVREQHDGIVVVELSSYLETGGAHGNPGRAFINYSRQQQKVLTLADMIIPGKESEFWQKAQLAHQGWLVSTKMNEDSEFMKTWPFKRTPHIALTYGAVILKYSVDTIAPYSMGHIELKIPYPQLNGILKPELFPGRG
>NZ_CP045799.1|WP_003402866.1|539469_540087_+|NUDIX-domain-containing-protein
MTQTTRSAPSAFETIKRENCFKGFYKLDKLHVRHELFAGGMSKEISRELFVRHDAVCVLPYDAKRDEVVLIEQFRVGAMKKTNNPWLVELVAGLIDKDEQPEEVAHREAEEEAGLKFEALWPITKYFPSPGGSDEFVHLFLGRCSSEGAGGLHGLEAEGEDIRVTVWSFDDALQAMKDGTIKNASTIIALQWLALNRAEIRGLWS
>NZ_CP045799.1|WP_002551796.1|540077_540530_+|DUF1249-domain-containing-protein
MVVNLLRERYRVDLAGLQAACEANYARLMRLLPDMRNEQRSRRVAVTQGDQMLGVLAVEVLLDCPYTTTLQVRQEHSLPWLPVPVLEVQVYHDARMAEVIGAEHARRFRGIYPYPNADMHQPDEKAQLNLFLGEWLSHCLACGHEFEAVR
>NZ_CP045799.1|WP_024640316.1|540728_541103_+|hypothetical-protein
MSYSGTPRRQLACFAGITFSLFSYIEVITLTGSALRGEHSLYMAIIGAVIGILSLRLMPWIVHLAGLAGMILGVALELLLAGYLWPGMPYERVLSYLLGAGLAGMVSAGLIASIVLKHRANQQM
>NZ_CP045799.1|WP_011266482.1|541190_541997_+|3',5'-cyclic-AMP-phosphodiesterase
MPSAALSSSVLLVQLSDSHLFAEADGALLGMSTRDSLEKVVDRVLAEQPHIDLVVASGDISQDGSVESYEAFRRISGRIDAPARWFAGNHDELPQMEQVAQHNGLLDPVVDIGQWRVTLLDSAVPGSVPGFLADTQLQLLEQSLSEAPDRHHLICLHHHPVAIGCEWMAPIGLRNADALFSVLDRFAQVRAILWGHVHQEFDQMRNGVRLLASPSTCIQFAPGSADFKVDTTAPGYRWLRLHDDGRLETAVSRVVGLEFEVDYGGTGY
>NZ_CP045799.1|WP_011266483.1|542085_542703_+|alpha/beta-fold-hydrolase
MTSDTPSLLYIHGLNSSNLSRKACQLSALMKSLGLADRLQVPELHHHPRQAMLQLEAAITALGRPLLVGSSLGGYYATHLAQRHGLKAVLINPAVNPHQLFDGFLGVQQNLYTGEQWQLTEDHIRALAELEVPAPQDPQQFQVWLQTGDETLDYRRAEKFYRSCALRIQAGGDHSFQGFAEHMPALLTVAGFAPDLLQKIDLSAL
>NZ_CP045799.1|WP_003431952.1|542779_544684_+|DNA-topoisomerase-IV-subunit-B
MANPSASSYNADAIEVLSGLDPVRKRPGMYTDTSRPNHLAQEVIDNSVDEALAGHARSVQVILHADNSLEVSDDGRGMPVDIHPEEGVSGVELILTKLHAGGKFSNKNYQFSGGLHGVGISVVNALSTQVRVRVKRDGNEYEMTFADGYKATELAVVGTVGKRNTGTSVYFAPDPKYFDTPKFSVSRLKHVLKAKAVLCPGLLVSFEDKSSGEKVEWHYEDGLRSYLQDSVTEFLRLPDEPFCGSFTGNKEAVDWALLWLPEGGDSVQESYVNLIPTAQGGTHVNGLRQGLLDAMREFCEFRNLLPRGVKLAPEDVWERIAFVLSMKMQEPQFSGQTKERLSSREAAAFVSGVVKDAFSLWLNTHSELGLQLADLAINNAGRRLKASKKVERKRITQGPALPGKLADCAGQDPARSELFLVEGDSAGGSAKQARDKEFQAILPLRGKILNTWEVDGGEVLASQEVHNIAVAIGVDPGAADISQLRYGKICILADADSDGLHIATLLCALFVQHFRPLVDAGHVYVAMPPLYRIDLGKEIYYALDEAERDGILDRLVAEKKRGKPQVTRFKGLGEMNPPQLRETTMDPNTRRLVQLTLDDFAATSEMMDMLLAKKRAGDRKSWLESKGNLAEVLT
>NZ_CP045799.1|WP_003402876.1|544680_545658_+|hypothetical-protein
MIRAWLAALILIAAPVVAAPLEALKLQSEHPVDDMAGGNLSGLAMCNGQLWTVSDRDDDVLYSLDVSQDTWKAQSHHIDAPAPQSYLPLKLRFMAGLSALIRGGSLDFEGVSCDAAGNRYLVSEAYGTVLKVPVSGKPFWLDLPKELVDQARAQGMLQRFNAIFEGIAVSPAGDRLWLAAEREKRGLLVVQRDKEQWTCGQSCVLLSESGLDALPPEQGSKKVSTDFSDVSLYNGKLFTLERAVYRICRRDLETGQVERCWSFAKEAMVPSRRYDQPYGLTEALVVDEKGAWIGIDNNFGVRADGEKRPIVWRFAAPEAGWSAGQ
>NZ_CP045799.1|WP_161633373.1|545696_546176_+|TIGR02281-family-clan-AA-aspartic-protease
MIMAWAAGLFLATRFFGDWEDRQQNPNAVVTSQHGDGYIEVQLAGNRQGHFVTTGQINGRTAEFMIDTGATDVAVPGDMADRLGLKRGFPVTVSTANGNSQGFRTTLDRLQLGDIVLTNVRALVAPGLDGEQVLLGMSAMKQLEFTQRGGNLLLRQSTK

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP045799_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045799_3

1174662-1174873

Orphan

Consensus_repeat	Method
GTCGCACGATAGTCGAGNTT	CRT

5 spacers

The CRISPR arrays of NZ_CP045799_3

>merge|NZ_CP045799|3|1174662-1174873|CRT
GTCGCACGATAGTCGAGGTTAAGGCATGTCGCTGCGGAGTCGCACGATAGTCGAGATTACGGCCTGCCGACGCGGCGTCGCACGATAGTCGAGATTACGGCCTGCCGACGCGGAGCGTCGCACGATAGTCGAGGTTAAGGCATGTCGCTGTGGAGTCGCACGATAGTCGATATTACGGCCTGCCGACGCGGCGTCGCACGATAGTCGAGATT

>NZ_CP045799|3|1|1174662-1174873|CRT
GTCGCACGATAGTCGAGGTT	AAGGCATGTCGCTGCGGA
GTCGCACGATAGTCGAGATT	ACGGCCTGCCGACGCGGC
GTCGCACGATAGTCGAGATT	ACGGCCTGCCGACGCGGAGC
GTCGCACGATAGTCGAGGTT	AAGGCATGTCGCTGTGGA
GTCGCACGATAGTCGATATT	ACGGCCTGCCGACGCGGC
GTCGCACGATAGTCGAGATT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045799.1\|WP_004406712.1\|1172561_1173563_-\|nucleoid-associated-protein-YejK	unknown	unknown	gnl\|CDD\|178993
NZ_CP045799.1\|WP_024639998.1\|1185896_1187021_-\|glycine-cleavage-system-aminomethyltransferase-GcvT	unknown	unknown	gnl\|CDD\|237435
NZ_CP045799.1\|WP_004406710.1\|1173956_1174238_+\|HU-family-DNA-binding-protein	unknown	unknown	gnl\|CDD\|259852
NZ_CP045799.1\|WP_024639990.1\|1167530_1168760_+\|CynX/NimT-family-MFS-transporter	unknown	unknown	gnl\|CDD\|129974
NZ_CP045799.1\|WP_024639994.1\|1176041_1178888_-\|valine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235582
NZ_CP045799.1\|WP_024639995.1\|1180229_1180664_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045799.1\|WP_002552284.1\|1180671_1181100_-\|DNA-polymerase-III-subunit-chi	unknown	unknown	gnl\|CDD\|235581
NZ_CP045799.1\|WP_024639999.1\|1187102_1189967_-\|aminomethyl-transferring-glycine-dehydrogenase	unknown	unknown	gnl\|CDD\|235432
NZ_CP045799.1\|WP_003365337.1\|1185272_1185485_-\|cold-shock-protein	unknown	unknown	gnl\|CDD\|224197
NZ_CP045799.1\|WP_004406720.1\|1170805_1171147_+\|GIY-YIG-nuclease-family-protein	unknown	unknown	gnl\|CDD\|178979
NZ_CP045799.1\|WP_011266811.1\|1169789_1170233_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224647
NZ_CP045799.1\|WP_024639991.1\|1168802_1169741_-\|aromatic-alcohol-reductase	unknown	unknown	gnl\|CDD\|187569
NZ_CP045799.1\|WP_024639993.1\|1174897_1175884_-\|23S-rRNA-(adenine(1618)-N(6))-methyltransferase-RlmF	unknown	unknown	gnl\|CDD\|236964
NZ_CP045799.1\|WP_024639992.1\|1171211_1172144_+\|glutathione-S-transferase-family-protein	unknown	unknown	gnl\|CDD\|223698
NZ_CP045799.1\|WP_003408905.1\|1166598_1167363_+\|amino-acid-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224051
NZ_CP045799.1\|WP_003316899.1\|1182968_1184096_+\|LPS-export-ABC-transporter-permease-LptF	unknown	unknown	gnl\|CDD\|275200
NZ_CP045799.1\|WP_004406715.1\|1172205_1172556_-\|glutaredoxin-family-protein	unknown	unknown	gnl\|CDD\|239274
NZ_CP045799.1\|WP_024639996.1\|1181158_1182649_-\|leucyl-aminopeptidase	unknown	unknown	gnl\|CDD\|234863
NZ_CP045799.1\|WP_010424552.1\|1170321_1170813_+\|nuclear-transport-factor-2-family-protein	unknown	unknown	gnl\|CDD\|378915
NZ_CP045799.1\|WP_024639997.1\|1184082_1185144_+\|LPS-export-ABC-transporter-permease-LptG	unknown	unknown	gnl\|CDD\|275201

Protein	Function_ID	Function_description	E-value
NZ_CP045799.1\|WP_004406712.1\|1172561_1173563_-\|nucleoid-associated-protein-YejK	gnl\|CDD\|178993	PRK00378, PRK00378, nucleoid-associated protein NdpA; Validated.	0
NZ_CP045799.1\|WP_024639998.1\|1185896_1187021_-\|glycine-cleavage-system-aminomethyltransferase-GcvT	gnl\|CDD\|237435	PRK13579, gcvT, glycine cleavage system aminomethyltransferase GcvT.	0
NZ_CP045799.1\|WP_004406710.1\|1173956_1174238_+\|HU-family-DNA-binding-protein	gnl\|CDD\|259852	cd00591, HU_IHF, DNA sequence specific (IHF) and non-specific (HU) domains. This family includes integration host factor (IHF) and HU, also called type II DNA-binding proteins (DNABII), which are small dimeric proteins that specifically bind the DNA minor groove, inducing large bends in the DNA and serving as architectural factors in a variety of cellular processes such as recombination, initiation of replication/transcription and gene regulation. IHF binds DNA in a sequence specific manner while HU displays little or no sequence preference. IHF homologs are usually heterodimers, while HU homologs are typically homodimers (except HU heterodimers from E. coli and other enterobacteria). HU is highly basic and contributes to chromosomal compaction and maintenance of negative supercoiling, thus often referred to as histone-like protein. IHF is an essential cofactor in phage lambda site-specific recombination, having an architectural role during assembly of specialized nucleoprotein structures (snups). Bacillus phage SPO1-encoded transcription factor 1 (TF1) is another related type II DNA-binding protein. Like IHF, TF1 binds DNA specifically and bends DNA sharply.	5.84891e-27
NZ_CP045799.1\|WP_024639990.1\|1167530_1168760_+\|CynX/NimT-family-MFS-transporter	gnl\|CDD\|129974	TIGR00896, Inner_membrane_transport_protein_YeaN, cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate. [Transport and binding proteins, Other].	6.02405e-132
NZ_CP045799.1\|WP_024639994.1\|1176041_1178888_-\|valine--tRNA-ligase	gnl\|CDD\|235582	PRK05729, valS, valyl-tRNA synthetase; Reviewed.	0
NZ_CP045799.1\|WP_002552284.1\|1180671_1181100_-\|DNA-polymerase-III-subunit-chi	gnl\|CDD\|235581	PRK05728, PRK05728, DNA polymerase III subunit chi; Validated.	4.32832e-53
NZ_CP045799.1\|WP_024639999.1\|1187102_1189967_-\|aminomethyl-transferring-glycine-dehydrogenase	gnl\|CDD\|235432	PRK05367, PRK05367, aminomethyl-transferring glycine dehydrogenase.	0
NZ_CP045799.1\|WP_003365337.1\|1185272_1185485_-\|cold-shock-protein	gnl\|CDD\|224197	COG1278, CspC, Cold shock proteins [Transcription].	2.53967e-31
NZ_CP045799.1\|WP_004406720.1\|1170805_1171147_+\|GIY-YIG-nuclease-family-protein	gnl\|CDD\|178979	PRK00329, PRK00329, GIY-YIG nuclease superfamily protein; Validated.	1.13301e-46
NZ_CP045799.1\|WP_011266811.1\|1169789_1170233_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|224647	COG1733, COG1733, Predicted transcriptional regulators [Transcription].	2.59793e-26
NZ_CP045799.1\|WP_024639991.1\|1168802_1169741_-\|aromatic-alcohol-reductase	gnl\|CDD\|187569	cd05259, PCBER_SDR_a, phenylcoumaran benzylic ether reductase (PCBER) like, atypical (a) SDRs. PCBER and pinoresinol-lariciresinol reductases are NADPH-dependent aromatic alcohol reductases, and are atypical members of the SDR family. Other proteins in this subgroup are identified as eugenol synthase. These proteins contain an N-terminus characteristic of NAD(P)-binding proteins and a small C-terminal domain presumed to be involved in substrate binding, but they do not have the conserved active site Tyr residue typically found in SDRs. Numerous other members have unknown functions. The glycine rich NADP-binding motif in this subgroup is of 2 forms: GXGXXG and G[GA]XGXXG; it tends to be atypical compared with the forms generally seen in classical or extended SDRs. The usual SDR active site tetrad is not present, but a critical active site Lys at the usual SDR position has been identified in various members, though other charged and polar residues are found at this position in this subgroup. Atypical SDR-related proteins retain the Rossmann fold of the SDRs, but have limited sequence identity and generally lack the catalytic properties of the archetypical members. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	1.9243e-78
NZ_CP045799.1\|WP_024639993.1\|1174897_1175884_-\|23S-rRNA-(adenine(1618)-N(6))-methyltransferase-RlmF	gnl\|CDD\|236964	PRK11727, PRK11727, 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF.	0
NZ_CP045799.1\|WP_024639992.1\|1171211_1172144_+\|glutathione-S-transferase-family-protein	gnl\|CDD\|223698	COG0625, Gst, Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones].	7.77762e-14
NZ_CP045799.1\|WP_003408905.1\|1166598_1167363_+\|amino-acid-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224051	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism].	4.26456e-165
NZ_CP045799.1\|WP_003316899.1\|1182968_1184096_+\|LPS-export-ABC-transporter-permease-LptF	gnl\|CDD\|275200	TIGR04407, LptF_YjgP, LPS export ABC transporter permease LptF. Members of this family are LptF, one of homologous, two tandem-encoded permease genes of an export ATP transporter for lipopolysaccharide (LPS) assembly in most Gram-negative bacteria. The other permease subunit is LptG (TIGR04408). [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides, Transport and binding proteins, Other].	1.55545e-122
NZ_CP045799.1\|WP_004406715.1\|1172205_1172556_-\|glutaredoxin-family-protein	gnl\|CDD\|239274	cd02976, NrdH, NrdH-redoxin (NrdH) family; NrdH is a small monomeric protein with a conserved redox active CXXC motif within a TRX fold, characterized by a glutaredoxin (GRX)-like sequence and TRX-like activity profile. In vitro, it displays protein disulfide reductase activity that is dependent on TRX reductase, not glutathione (GSH). It is part of the NrdHIEF operon, where NrdEF codes for class Ib ribonucleotide reductase (RNR-Ib), an efficient enzyme at low oxygen levels. Under these conditions when GSH is mostly conjugated to spermidine, NrdH can still function and act as a hydrogen donor for RNR-Ib. It has been suggested that the NrdHEF system may be the oldest RNR reducing system, capable of functioning in a microaerophilic environment, where GSH was not yet available. NrdH from Corynebacterium ammoniagenes can form domain-swapped dimers, although it is unknown if this happens in vivo. Domain-swapped dimerization, which results in the blocking of the TRX reductase binding site, could be a mechanism for regulating the oxidation state of the protein.	2.02754e-26
NZ_CP045799.1\|WP_024639996.1\|1181158_1182649_-\|leucyl-aminopeptidase	gnl\|CDD\|234863	PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional.	0
NZ_CP045799.1\|WP_010424552.1\|1170321_1170813_+\|nuclear-transport-factor-2-family-protein	gnl\|CDD\|378915	pfam12680, SnoaL_2, SnoaL-like domain. This family contains a large number of proteins that share the SnoaL fold.	1.05564e-18
NZ_CP045799.1\|WP_024639997.1\|1184082_1185144_+\|LPS-export-ABC-transporter-permease-LptG	gnl\|CDD\|275201	TIGR04408, LptG_lptG, LPS export ABC transporter permease LptG. Members of this family are LptG, one of homologous, two tandem-encoded permease genes of an export ATP transporter for lipopolysaccharide (LPS) assembly in most Gram-negative bacteria. The other permease subunit is LptF (TIGR04407). [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides, Transport and binding proteins, Other].	5.42057e-145

>NZ_CP045799.1|WP_004406710.1|1173956_1174238_+|HU-family-DNA-binding-protein
MALTKDQLIADIAESIEAPKTTARNALEQLGQIVADQLENGVEITLPGIGKLKVAERPARTGRNPSTGAAIEIAAKKVIKFVPAKVLTDSINK
>NZ_CP045799.1|WP_004406712.1|1172561_1173563_-|nucleoid-associated-protein-YejK
MPIRHCIVHLIEKKPDGTPAVLHARDSELAESQAIENMLADLNESYNAKQGKAWGLFHPESGAHPFSGWLKEYIDGGSDFTAFSRVAVEHLQKLMEESNLSVGGHVLFAHYQQGMTDYLAIALLHHSEGVAVNAELDVTPSRHLDLGQLHLAARINISEWQNNKQSKQYISFIKGKNGKKVSEYFRDFIGCQEGVDGPGETRTLLKAFSDFVESEDLPEESAREKTKTLVDYASSQSKMGEPMGLEELSELIDEERPRAFYDHIRNKDYGLSPEIPADKRTLNQFRRFTGRAEGLSISFEAHLLGDKIEYDESAGTLIIKGLPTQLTDQLKRR
>NZ_CP045799.1|WP_004406715.1|1172205_1172556_-|glutaredoxin-family-protein
MLLRTLKKFALIMLVVVIYQNWGRIEHFVNPPPADVAQSYSQAKVVMYATDWCGYCKQTRRFLDSKGIAYQEFDIEKSEEGRKAYEALGGRGIPLIDVNGTLIRGFDPDQILAALK
>NZ_CP045799.1|WP_024639992.1|1171211_1172144_+|glutathione-S-transferase-family-protein
MSELILHHYPTSLFAEKARLMLGFKGLTWRSVTIPSIMPKPDLTALTGGYRRTPVLQAGADIYCDTALMARRLEQEKASPAFYPKGQEFTVAGLAAWADSVLFMHAVSLVFQPESMAVRFAKVPPDAAKAFVADRSTLFNGGTASRPPVEQVKHQWPTLMSRLELQLSHGGDFLFGVASIADFSVAHTLWFLKQTPVTAPFVDEYPSVRAWLDRVLGFGHGTFSDLSSADAIEIARNATPAPLPDETLVDPNGFKAGDKVAVSAVDYGVEAVEGELVFNGREELILRREDERAGVVHVHFPRMGYRIEKR
>NZ_CP045799.1|WP_004406720.1|1170805_1171147_+|GIY-YIG-nuclease-family-protein
MPEVACTASGSTAEQAVGKPWFVYLVRAANGSLYCGISDDPQRRFAAHQRGKGARFFSSSPAMALVYVEQWPSKGEALRHERLIKKLKKSAKEALAASYVTSPIHARDGVPSV
>NZ_CP045799.1|WP_010424552.1|1170321_1170813_+|nuclear-transport-factor-2-family-protein
MNYEEQSQANSALITRFYEAFAQLDAEAMSACYTDDVLFSDPAFGELRGAQVGDMWRMLTSRAKNFSVVFDQVRADDQTGSAHWVATYLFSQTGRTVVNDIQARFVFRDGKICEHRDHFDMWRWSRQALGLKGLLLGWTPLVRNAVRAQALKGLKTFSESRRA
>NZ_CP045799.1|WP_011266811.1|1169789_1170233_+|helix-turn-helix-transcriptional-regulator
MPVDIQKVGTSVIPGGLDAQEVVRRSEAACAALSDDEDGLKRDILGHAGNRWSLGVVHALGVSSPLRHAQLRRKLHGVTQRMLTHTLRQLEQDGLITRHDYREKPLRVEYSLTDLGMGLLVQMIPLWTWVIENSEAFSAARNRYLDR
>NZ_CP045799.1|WP_024639991.1|1168802_1169741_-|aromatic-alcohol-reductase
MQADNANVKQRILVIGAGELGLAVLRGLVEKAGAHGLSIAVLLRQSSLSTQAPAKRVEIEEIRALDIAIETADLAVASVDELATVMTRYDTVISCAGFAAGRGTQRKLTDAALKAGIKRYLPWQFGVDYDLIGRGSSQDLFDEQLDVREKLRAQQRTEWVIVSTGMFTSFLFDPAFGVVDLQGGRINALGSLDTAVTVTTAEDIGRLTAAIVMHEPRIANQVVYTAGDTLTYAGLADLVERVTGRDIERHVWSVAQLQADLTEMPDDNLRKYRAVFAMGRGVAWDVASTYNAKSGLSVTRAEQWARANLTQT
>NZ_CP045799.1|WP_024639990.1|1167530_1168760_+|CynX/NimT-family-MFS-transporter
MTAKAQLSPQPTADQPHSALKRPWLLLLGLVLVALNLRPALSSIAPLLDTVSDSLGMSAAEAGLLTTLPVLCLGLFAPLAPILARRFGSERVVMVVLLTLAAGLAVRSLFGQVGLFGGSLLAGASIGIIGVLLPGIVKRDFPHKAGAMTGVYTMALCLGAAIAAGSTVPLSQYVGGSWQIGLGFWLVPALIAAALWFPQAREVHGTHRDVYRVRGLLRDPLAWQVTLYMGLQSSLSYIVFGWLPSILIGRGLTPIQAGLLLSGSIIAQVISALAVPYLATRGKDQRLAIMLVMSLTLIGLFGCLYAPLGGLWGWAILLGIGQGGTFSLALALIVLRSRDSHVAANLSSMAQGVGYTIASTGPFAVGVVHDMTGSWSAIGWIFAVLGLGAIIAGMGAGRALQVQVSSEKV
>NZ_CP045799.1|WP_003408905.1|1166598_1167363_+|amino-acid-ABC-transporter-ATP-binding-protein
MSEVINKPLGAEGMIRMEGVHKWYGQFHVLKDINLNVRQGERIVLCGPSGSGKSTTIRCLNRLEEHQQGRIIVDGTELTSDLKQIETIRREVGMVFQHFNLFPHLTILQNCTLAPMWVRKMPKKKAEEIAMHYLERVRIPEQAHKFPGQLSGGQQQRVAIARALCMKPKIMLFDEPTSALDPEMVKEVLDTMVGLAEEGMTMLCVTHEMGFARTVANRVIFMDKGEIVEQAAPNDFFDNPQSDRTKLFLSQIIH
>NZ_CP045799.1|WP_024639993.1|1174897_1175884_-|23S-rRNA-(adenine(1618)-N(6))-methyltransferase-RlmF
MTDTRKPPRKKPQRPAKPAAPREKATLHPRNRHQGQYDFAKLIKSSPELAAFVILNPYGKESIDFANPQAVRVFNRALLKAFYGIAHWDIPADYLCPPIPGRADYLHFLADLLAEDNEGVIPRGASIKALDIGTGANCIYPLLGHSDYGWQFVGSDIDSTAIAAATTIVKANGLSKAISVRQQGNRKQILLGLLDSSERFHVSLCNPPFHASLEEAQRGSQRKWRALGKADPKRKLPVLNFGGQSQELWCDGGEIGFITRLIQESALLPSQVAWFSTLVSKASNLPPIHSALKKAGVLEVKVVEMGQGQKQSRFVAWTFLDKAQRAPG
>NZ_CP045799.1|WP_024639994.1|1176041_1178888_-|valine--tRNA-ligase
MDKTYQPHAIETSWYQTWESENYFAPQGVGDSYTIMIPPPNVTGSLHMGHGFNNAIMDALIRFRRMQGRNTLWQPGTDHAGIATQMLVERRLEAQGVSRHELGREKFLDKIWEWKAESGGNISRQIRRLGSSVDWSRERFTMDDGLSEAVKEAFVRLHEDGLIYRGKRLVNWDTKLHTAISDLEVENHDEKGHLWNLRYPLADGAKTAEGLDYLIVATTRPETMLGDAAVAVNPQDERYKALIGKFVELPLVGRLIPIIADDYCDPEFGTGCVKITPAHDFNDYEVGKRHNLPLLNIFDKNANVLPAAQVFNLDGTLNESVDGSLPAAYAGLDRFEARKQIVAAFDAAGLLVSVDDHALKVPKGDRSGTIIEPWLTDQWYVSTKPLAEPAIAAVEDGRIAFVPKQYENMYFSWMRDIQDWCISRQLWWGHRIPAWYDESGKVYVGRDEAEVRAKNNLRPEVALQQDNDVLDTWFSSGLWTFSTLGWPEKTKALETFHSTDVLVTGFDIIFFWVARMIMLTMHLVKNEDGTPQVPFKTVYVHGLVRDGQGQKMSKSKGNVLDPLDIVDGIDLETLVEKRTSGLMQPQLAKKIEKQTRQEFADGIASYGTDALRFTFCSLASTGRDIKFDMGRVEGYRNFCNKIWNAARYVLDKGEDCGQNGEAVELSLADRWIISQLQRTEAEVTRQLDQFRFDLAAQALYEFIWNQYCDWYLELSKPVLWDETAPVERQRGTRRTLVRVLEVALRLAHPFMPFITEEIWQRLAPLAGAQGKTIMLQPWPVANDARIDQAAEDDIEWLKGLMLAVRNIRGEMNIGPGKPLQLFLKNVSAEDQRRLSENDYLLKKLAKLESMTVLTEGAEAPLSATALVGDMEVLVPMAGLIDKGAELARLDKEIQRLQGEVQRVGGKLSNAAFVDKAPPEVIAKERAKLTEAEQALGKLAEQHARIASL
>NZ_CP045799.1|WP_024639995.1|1180229_1180664_-|hypothetical-protein
MDTSKKAESAHLLNDLESIRQLLGDDPAHSPQSNDTARPEGQIPLLFDVVGARPDAAYQQDVDEDDIPTLTPDAHTAPAPQAQQAAQPQALPNPDALLHLDNELRAAAQLIMQDVIDDFAPHIENEIKRRLEARLERLLAQQQK
>NZ_CP045799.1|WP_002552284.1|1180671_1181100_-|DNA-polymerase-III-subunit-chi
MTQVDFYILPSADPAARLDFACKLTEKAWRLGHKVYLHCSDAAQREDLDARLWRFRGEVFLPHGDAESDHDAAVVLGLGDDSGEHSDLLVNLDLSIPAFFKRFARVAEVVVEDPAIRLAARESFRSYREQGYPPQDHRLQRL
>NZ_CP045799.1|WP_024639996.1|1181158_1182649_-|leucyl-aminopeptidase
MELVVKSVSPETLKTATLVVTVGESRVLAGAARTVDILSGGAVSLILKRGDLAGKVGQSLLLHNLPNIKAERVLLVGTGKEDELSDRQLKKIVGAALTCLKGLGGTDAAIALDDLSVKNRDTYGMARLLVEALADGEYVFDRFKTQKAKVRALKKITLLTDKAKAADVERASTHAQAIATGMALTRDLGNLPPNICHPTYLGEEAKALGKAHKNLKVEVHDEKKLADLGMGSFLAVAQGSAQPPRLIVMNYQGGKKGDQPFVLVGKGITFDTGGISIKPASGMDEMKFDMCGAASVFGTLRAVLELKLPINLVCILACAENMPSGTATRPGDIVTTMSGQTVEILNTDAEGRLVLCDALTYAERFKPQAVIDIATLTGACVVALGGHTSGLLGNNDALINQLLDAGRQADDRAWQLPLFDEYQEQLDSPFADIANIGGPKGGTITAACFLSRFTKAYHWAHLDIAGTAWLSGGKEKGATGRPVPLLTQYLLDRAGV
>NZ_CP045799.1|WP_003316899.1|1182968_1184096_+|LPS-export-ABC-transporter-permease-LptF
MIVFRYLSREVLLTLSAVSAVLLVFIMSGRFIKYLAQAASGALDPGVLFLIMGFRLPGFLQVILPLGLFLGILMAYGRLYLESEMTVLAATGMSQQRLLAITMGPATLVGLLVAWLSFSLAPQGATQFSLLINQQDAMTEFDTLVPGRFQALRDGTRITYTKELSEDRSQLAGVFISEKRMSSDKSKDNGITVLVAEKGHQEVRPNGSRFLILENGYRYDGNPGAADYRVIKYDTYGAMLPKPEISEEITDREAIPTSELIGNPAPRSVAELQWRISLPLSVFIVTLMAIPLSRVNPRQGRYLKLLPAILLYMSYLAILISVRSSLEKGKLPLSLGMWWVHAIYLSIGLLLFYWEPLRLKMASRRSVTEVTRGQA
>NZ_CP045799.1|WP_024639997.1|1184082_1185144_+|LPS-export-ABC-transporter-permease-LptG
MVKLDRYIGKSVLLAILAVLGIILGLVSLFAFIDEMGDISDTYTLADALSYVMLTAPRRVYDTLPMAALIGCLIGLGTLASSSELTIMRAAGVSIGRIVWAVMKPMLVLMIAGVLVGEYVAPYAENQAQAARSLAQGSGDAQSARHGLWHRQGDEFIHINTVQPNGLMLGVTRYRFDDQRHMQTSSFAKEANFKTDYWELKDVTTTHFNDGRTEVINTPVERWDVALSPQLLSTVIMPPESLSISGLWSYAHYLADQGLSNGRYWLAFWTKVLQPAVTVALVLMAISFIFGPLRSVTLGQRVFTGVVVGFTFRIIQDLLGPSSLLFGFPPLLAVLLPAAACALAGVILLRRAG
>NZ_CP045799.1|WP_003365337.1|1185272_1185485_-|cold-shock-protein
MAERQSGTVKWFNDEKGFGFITPESGPDLFVHFRAIQGNGFKSLKEGQKVTFVAVQGQKGMQADEVQAEG
>NZ_CP045799.1|WP_024639998.1|1185896_1187021_-|glycine-cleavage-system-aminomethyltransferase-GcvT
MSTESLLTTPLHALHRELGAKMVPFAGYDMPVQYPAGVMKEHLHTRAQAGLFDVSHMGQIRLTGADAAKALEALVPVDIIDLPVGMQRYAMFTDENGGILDDLMVANLGNDQLMLVVNAACKDQDLAHLCRHLAGHCKIEPLFEERALLALQGPAAVTVLARLAPEVAKMTFMQFNSVTLLGVKCYVSRSGYTGEDGYEISVPAEQAEALARRLLEEPEVAPIGLGARDSLRLEAGLCLYGHDMDTQTSPIEASLLWAISKVRRADGARAGGFPGAERIFAQQQSGVSKKRVGLLPQERTPVREGTEIVDEQGAVIGTVCSGGFGPSLAGPLAMGYLHNDYTTLNTPVWAMVRGKKVPMLVAKMPFVAQRYFRG
>NZ_CP045799.1|WP_024639999.1|1187102_1189967_-|aminomethyl-transferring-glycine-dehydrogenase
MTDRIELTTANEFIARHIGPRAADELAMLQTLGFDSIEALSESVIPESIKGTSVLNLPAGQSEADALASIKAIASKNQLFKTYIGQGYYNTHTPAPILRNLLENPAWYTAYTPYQPEISQGRLESLLNFQTLISDLTGLPIANASLLDEATAAAEAMTFCKRLSKNKASQQFFASSHCHPQTLDVLRTRAEPLGITVVVADEHELGDVSDYFGALLQYPASNGDVFDYRELVERFHAANALVAVAADLLALTLLTPPGEFGADVAIGSAQRFGVPLGFGGPHAAYFSTRDAFKRDMPGRLVGVSVDRHGKQALRLAMQTREQHIRREKATSNICTAQVLLANIASMYAVYHGPRGLTQIANRVHQLTAILAEGLSALGLKAEQAFFFDSLTLHTSDRTAALHAAARARHINLREIDDQHLGLSLDETTSQSAVETLWAIFANDGQSLPDFAALADSVQSRLPAGLLRQSAILSHPVFNRYHSETELMRYLRKLADKDLALDRTMIPLGSCTMKLNAASEMIPVTWAEFGNLHPFAPAEQSAGYQQLTDELEAMLCAATGYDAISLQPNAGSQGEYAGLLAIRAYHQSRGDEHRDICLIPSSAHGTNPATANMAGMRVVVTACDARGNVDIEDLRAKAVQHRDQLAAIMITYPSTHGVFEEGIREICGIVHDNGGQVYIDGANMNAMVGLCAPGKFGGDVSHLNLHKTFCIPHGGGGPGVGPIGVKSHLAPFMPGHARMERKEGAVCAAPFGSASILPITWMYIRMMGGEGLKRASQLAILNANYISRRLEEHYPVLYTGSNGLVAHECILDLRPIKDSSGISVDDVAKRLIDFGFHAPTMSFPVAGTLMIEPTESESREELDRFCDAMIKIREEIRAVENGTLDKDDNPLKNAPHTAAEIVGQWSHPYSREQAVYPVDSLIENKYWPPVGRVDNVFGDRNLVCACPSIENYQEA

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP045799_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045799_4

4326087-4326188

Unclear

Consensus_repeat	Method
GCTCCGCATGGGTATGCCGTTCT	CRISPRCasFinder

1 spacers

cas3

The CRISPR arrays of NZ_CP045799_4

>merge|NZ_CP045799|4|4326087-4326188|CRISPRCasFinder
GCTCCGCATGGGTATGCCGTTCTGGACGCTCTGCCTCCTGCCTTGAGTGCGCGGACAGCTCTCTGACTATCGTACCCATGCTCCGCGTGGGTATGCCGTTCT

>NZ_CP045799|4|2|4326087-4326188|CRISPRCasFinder
GCTCCGCATGGGTATGCCGTTCT	GGACGCTCTGCCTCCTGCCTTGAGTGCGCGGACAGCTCTCTGACTATCGTACCCAT
GCTCCGCGTGGGTATGCCGTTCT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045799.1\|WP_011268646.1\|4322077_4322914_-\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225543
NZ_CP045799.1\|WP_024638943.1\|4321375_4322008_+\|thioredoxin-domain-containing-protein	unknown	unknown	gnl\|CDD\|239322
NZ_CP045799.1\|WP_024638935.1\|4333509_4334553_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045799.1\|WP_024638933.1\|4338053_4338515_-\|NUDIX-domain-containing-protein	unknown	unknown	gnl\|CDD\|240041
NZ_CP045799.1\|WP_024638938.1\|4329408_4330098_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NZ_CP045799.1\|WP_024638937.1\|4330314_4332687_+\|outer-membrane-protein-assembly-factor-BamA	unknown	unknown	gnl\|CDD\|274514
NZ_CP045799.1\|WP_024638936.1\|4332806_4333235_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045799.1\|WP_011268643.1\|4318778_4319744_-\|YihY/virulence-factor-BrkB-family-protein	unknown	unknown	gnl\|CDD\|224214
NZ_CP045799.1\|WP_024638942.1\|4323576_4324089_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045799.1\|WP_024638944.1\|4320829_4321231_-\|DUF2177-family-protein	unknown	unknown	gnl\|CDD\|378319
NZ_CP045799.1\|WP_003425462.1\|4323229_4323409_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045799.1\|WP_003402493.1\|4319967_4320159_-\|CsbD-family-protein	unknown	unknown	gnl\|CDD\|283241
NZ_CP045799.1\|WP_003425465.1\|4325031_4325895_+\|lipoprotein	unknown	unknown	unknown
NZ_CP045799.1\|WP_003363371.1\|4320371_4320752_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045799.1\|WP_024638940.1\|4326673_4328011_-\|DEAD/DEAH-box-helicase	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|223587
NZ_CP045799.1\|WP_024638931.1\|4339189_4340869_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|179812
NZ_CP045799.1\|WP_024638939.1\|4328161_4329397_-\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|236532
NZ_CP045799.1\|WP_024638932.1\|4338535_4339186_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045799.1\|WP_024638941.1\|4324233_4324962_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|273922
NZ_CP045799.1\|WP_146052546.1\|4334689_4336987_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP045799.1\|WP_011268646.1\|4322077_4322914_-\|GntR-family-transcriptional-regulator	gnl\|CDD\|225543	COG2996, COG2996, Predicted RNA-bindining protein (contains S1 and HTH domains) [General function prediction only].	1.89195e-109
NZ_CP045799.1\|WP_024638933.1\|4338053_4338515_-\|NUDIX-domain-containing-protein	gnl\|CDD\|240041	cd04685, Nudix_Hydrolase_26, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily requires a divalent cation, such as Mg2+ or Mn2+, for their activity and contain a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, where U = I, L or V), which functions as a metal binding and catalytic site. Substrates of nudix hydrolases include intact and oxidatively damaged nucleoside triphosphates, dinucleoside polyphosphates, nucleotide-sugars and dinucleotide enzymes. These substrates are metabolites or cell signaling molecules that require regulation during different stages of the cell cycle or during periods of stress. In general, the role of the nudix hydrolase is to sanitize the nucleotide pools and to maintain cell viability, thereby serving as surveillance & "house-cleaning" enzymes. Substrate specificity is used to define families within the superfamily. Differences in substrate specificity are determined by the N-terminal extension or by residues in variable loop regions. Mechanistically, substrate hydrolysis occurs by a nucleophilic substitution reaction, with variation in the numbers and roles of divalent cations required.	1.44002e-30
NZ_CP045799.1\|WP_024638937.1\|4330314_4332687_+\|outer-membrane-protein-assembly-factor-BamA	gnl\|CDD\|274514	TIGR03303, OM_YaeT, outer membrane protein assembly complex, YaeT protein. Members of this protein family are the YaeT protein of the YaeT/YfiO complex for assembling proteins into the outer membrane of Gram-negative bacteria. This protein is similar in sequence and function to a non-essential paralog, YtfM, that is also in the Omp85 family. Members of this family typically have five tandem copies of the surface antigen variable number repeat (pfam07244), followed by an outer membrane beta-barrel domain (pfam01103), while the YtfM family typically has a single pfam07244 repeat. [Protein fate, Protein and peptide secretion and trafficking].	0
NZ_CP045799.1\|WP_024638931.1\|4339189_4340869_-\|AAA-family-ATPase	gnl\|CDD\|179812	PRK04293, PRK04293, adenylosuccinate synthetase; Provisional.	9.27936e-88
NZ_CP045799.1\|WP_011268643.1\|4318778_4319744_-\|YihY/virulence-factor-BrkB-family-protein	gnl\|CDD\|224214	COG1295, Rbn, Ribonuclease BN family enzyme [Replication, recombination, and repair].	2.83791e-66
NZ_CP045799.1\|WP_024638944.1\|4320829_4321231_-\|DUF2177-family-protein	gnl\|CDD\|378319	pfam09945, DUF2177, Predicted membrane protein (DUF2177). This domain, found in various hypothetical bacterial proteins, has no known function.	5.69881e-43
NZ_CP045799.1\|WP_024638943.1\|4321375_4322008_+\|thioredoxin-domain-containing-protein	gnl\|CDD\|239322	cd03024, DsbA_FrnE, DsbA family, FrnE subfamily; FrnE is a DsbA-like protein containing a CXXC motif. It is presumed to be a thiol oxidoreductase involved in polyketide biosynthesis, specifically in the production of the aromatic antibiotics frenolicin and nanaomycins.	7.85494e-44
NZ_CP045799.1\|WP_003402493.1\|4319967_4320159_-\|CsbD-family-protein	gnl\|CDD\|283241	pfam05532, CsbD, CsbD-like. CsbD is a bacterial general stress response protein. It's expression is mediated by sigma-B, an alternative sigma factor. The role of CsbD in stress response is unclear.	5.96802e-09
NZ_CP045799.1\|WP_024638938.1\|4329408_4330098_-\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	9.70776e-76
NZ_CP045799.1\|WP_024638940.1\|4326673_4328011_-\|DEAD/DEAH-box-helicase	gnl\|CDD\|223587	COG0513, SrmB, Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis].	2.80475e-136
NZ_CP045799.1\|WP_024638939.1\|4328161_4329397_-\|HAMP-domain-containing-protein	gnl\|CDD\|236532	PRK09470, cpxA, envelope stress sensor histidine kinase CpxA.	6.24629e-51
NZ_CP045799.1\|WP_024638941.1\|4324233_4324962_+\|hypothetical-protein	gnl\|CDD\|273922	TIGR02001, gcw_chp, conserved hypothetical protein, proteobacterial. This model represents a conserved hypothetical protein about 240 residues in length found so far in Proteobacteria including Shewanella oneidensis, Ralstonia solanacearum, and Colwellia psychrerythraea, usually as part of a paralogous family. The function is unknown.	4.9564e-46

>NZ_CP045799.1|WP_003425465.1|4325031_4325895_+|lipoprotein
MQSLFKAFVTLLMTVALLAGCNQVGLAYRNLDVIIPWTLSDYLDMNSEQKGWLDVRLKQHLSWHCSTQLPEYLTWLDKLEDMVKTDQVTYEGLQARTSEAKEAIAKISKEITPSAVELLSRFDDKQVQEMQESFAKDQRKRENKYLDQPLERQIAERADRMQKRVTPWVGKLNQAQKDRIQAWSASLGEQNKAWIENRTRWQNLFLATVQQRQASDFPQRIAALLQDRETFWTPEYRKAYDQTEKAAISLIVDITALSTPEQRAKLLSRIADMRKDFTDLDCLKSQK
>NZ_CP045799.1|WP_024638941.1|4324233_4324962_+|hypothetical-protein
MLSHRLHVLSFSAMLVCQSVSAQVLERDLGDFDLKLATTPTRSMAQGLVTPTGGSGSFHGGMDLTHESGFYFGQWAPNMGLASDTGMELDSYMGFKKPFDNTLGYELGMIRYSYPDTSQIDSHEFYAGLRMRDSRIGAAFSNDVGTRDSTVFVDLGAIEQLGVGVRMQYANHQFDTPQSAADGGMINGFNDWSLNLSRPWLGIDMNLIYSGSSLSGGDCSVYSGHNARCDGTFTLKAVRSFF
>NZ_CP045799.1|WP_024638942.1|4323576_4324089_+|hypothetical-protein
MKNWMLFGALVYLGGCASHHCENGPNDSQLTDSPCRAEHLLYQNDMLQAKLLISEDNRENYELAEAMLRRAALDDASGEAEFYQAVLLIRQQADPKQIIDLLQTAAKHKHPLAIALLSQQLSVSDPKLAERYQSEYAQLDVAKSGYPSFEQALVVIRGLIIPSARTTAAN
>NZ_CP045799.1|WP_003425462.1|4323229_4323409_+|hypothetical-protein
MRIKASHSKAKPAPAVETSDSINAQIAAFLKSGGEIQQIAKGVSGQTFAPSKQINLGKK
>NZ_CP045799.1|WP_011268646.1|4322077_4322914_-|GntR-family-transcriptional-regulator
MALIGRYNSLQIVKHTNFGLYLDGAQDGEILLPNRYIPKDVPTEDEDWLNVFIYLDSEDKLLATTEKPKVQVGEFASLKVVEVNSIGVFLDWGLPKDLLLPYSEEKRTLQAGDYCVVHVYLDKHTRRITATARLDRYLDKTPANYSVGQEVDLLVAEATDMGFKAIINNKHWGLIHKNEVFKFMRAGKQEKGYIKEIRSDGNISLSLQPVGAEAASSLNSKILTKLRENNGTLPVSDKSDPQVISGLFGVSKGNFKKAIGALYKQGQIVIHADRIELV
>NZ_CP045799.1|WP_024638943.1|4321375_4322008_+|thioredoxin-domain-containing-protein
MNTVGPLKIDVWSDYVCPFCYLQLAVLEQLQQTYGERLEFNWHAFELRPDPLALLDPSADYLRETWSRSVLPMADRRQVMMKMPSVQPRSRKVLEAAVFARNAGGFEAFHKEAYRAFFEKGLDIGETHTLLELATTTGLDRQAMEQALNAGHFEKAVLDDRQLAQKLGLRAVPVVLLRRSDEALEDARVFNGTLPFERLSQEIDALATWA
>NZ_CP045799.1|WP_024638944.1|4320829_4321231_-|DUF2177-family-protein
MKRILIAYFGTLLAFLILDGLWLGVLMGPTYREWLGPLMLDTPVLGPAIAFYLLYGAGVVFFGVMPALRVQRLSHATLCSGLLGLIAYGTYDLTNWATLQGWPAQLALVDHAWGTVVSALAGTAGYMAVRRFA
>NZ_CP045799.1|WP_003363371.1|4320371_4320752_+|hypothetical-protein
MKLDKKLAIARRNQDLGGAVLGVNNTHFAVLDHKRNIWWFDLPVPRLQVGQYEWLHLLLHTPETDQLLHLKVTTVFMRDHMEGLEVRNADKRKPTVSLELSADKDSFLKDMRPKGSNLSFAGFLQK
>NZ_CP045799.1|WP_003402493.1|4319967_4320159_-|CsbD-family-protein
MSSTSDKAKGMANEAVGNVKQAVGKATDNDKLQAEGKVQELKGEGQQTVGKVKDAIKKGVDKA
>NZ_CP045799.1|WP_011268643.1|4318778_4319744_-|YihY/virulence-factor-BrkB-family-protein
MIFPHLRKLKVGKVLVRTVNEFLDDEMSTYASALAYQMLFSLFPFLLFLIALIGFLHLPDFFSWLRLQSEFLLPPQALEQVNPVIDQLQQSKGGLLSIGIVIALWTASAGVRLMMSAMNAAYDVVEGRPIWKRLPLSILYTVGIAGMLLAAAAFMVLGPQVMNWIAAQIGMEDFIVTLWTILRWPAIIILLMVAVALIYYVMPDVKQEFRFITPGSVLAVVVWIVASLAFGFYVKTFADYNAMYGSIGAIIVLLLYFYISAAVLLLGAEMNAVIEHMSAEGKDAGEKEAGDGGEESSETVKQHVSGLGRDHSVPLQKADEA
>NZ_CP045799.1|WP_024638940.1|4326673_4328011_-|DEAD/DEAH-box-helicase
MFSEFALHERLLKAVAELKFVEPTPVQAAAIPLVLQGRDLRVTAQTGSGKTAAFVLPILNRLIGPAKVRVDIRAVILLPTRELAQQTLKEVERFSQFTFVKAGLITGGEDFKVQAAMLRKVPDILIGTPGRLLEQLNAGNLDLKHVEVLVLDEADRMLDMGFSEDVERLAGECAGREQTMLFSATTGGAGLREMIGKVLKDPQHLQVNSVSELASGTRHQIITADHNVHKEQVLNWLLANETYQKAIIFTNTKAMADRLYGRLVALEYKAFVLHGDKDQKDRKAAIDRLKQGGAKIMVATDVAARGLDVEGLDMVINFDMPRSGDDYVHRVGRTGRAGSDGLAISLICHGDWNLMSSVERYLKQSFERRVIKEVKGTYGGPKKVKASGKAVGVKKKKTDAKGDKKKVAAKGPTKRKTVNRPKSDLVSQDGMAPLKKRSTPAPAAE
>NZ_CP045799.1|WP_024638939.1|4328161_4329397_-|HAMP-domain-containing-protein
MFWKLFLAFWLATSLTFMVGAGLFMFTQSGRGDPSFSTVLDNEVRILQRSGIAAGRALLDTWQPEGQGRVGLYDNQGLLLAGEALENPRFELAVHTREGALVHIRSTQRPNHDDQPSHLNPLITGTVMSALFSWFLSSYLVAPLMKLREAMGKVARGRFDTRVKPDMGRRRDEIVDLAEDCDRMANQLKVMADSQQQLLHDISHELRSPLTRMSAAIGLLRQEPSQLDMLERIERESERMDSLIEELLTLARMQSDVESLTREKVDVISLLAAIVEDAEFEAGLKQCRVRLQAPGSFVAQVDSELLYRAFENVIRNAVRHTAVGSDVVVVANVQAQPLCLMVNVIDQGPGVDEACLQRIFQPFERGPENAAQGFGLGLAIALRAIEMHGGQIAARNRPGGGLVVDVLLPVS
>NZ_CP045799.1|WP_024638938.1|4329408_4330098_-|response-regulator-transcription-factor
MTSVLLVDDDRELTEMLSQYLTRESFDVTCTNSAEEGEIEALSGRHDIVVLDIMMPRISGIEVLRRIRAQSQVPVILLTARGDNIDRISGLELGADDYVPKPSSPGELVARLRAIMRRVRAVSVVDAVRDVIQAGELMLWPGKREARWQGATLELTGNEFCLLEELARHAGQLVSKQNLSMNALGRPLARYDRSIDVHISSIRHKLGPRNDNQSWIQSVRNLGYMLITP
>NZ_CP045799.1|WP_024638937.1|4330314_4332687_+|outer-membrane-protein-assembly-factor-BamA
MISSRLLLSFCLLISVPLAHADTFSISDIRVNGLQRVSAGSVFAALPLNVGDQADEQRLADASRSLFKTGFFQDINVARDGNVLVINVVERPSIASIEIVGNKVISTDDLMKGLKQSGLSEGEIFQRATLEGVRNELQRQYVSQGRYSASVDTQALPAPRNRIALKITIDEGTVASIQHINVVGNTVFSDEQLADQFQLKTSNWLSFFKNDDKYAREKLSGDLERLRSWYLDRGYINMDINSTQVSLTPDKKGVFITVNITEGDRYTVGSVKLGGDLKVPKDQLEQLILVKPGQVFSRKVMTDSTNLITRRLGNDGYTFANVNGVPKANDADHTVDISFVVDPGKRAYANRINFHGNTKTADEVLRREMRQMEGGWASTYLIDQSKVRLERLGFFKEVNVETPAVPGTDDQVDINYAVEEQASGNITASVGFSQSAGLILGGSISQNNILGTGNFASLGMTRSEYQTKYNFAFTNPYFTPDGVSLGYNVFYNATDYSKYYDDDDEVSYYSLNSVGAGVNLGYPISETSRLTYGLSIQRDTLDPGSYSADEIYDFIEREGDAFTNLKASVGWSESTLNKGVLATRGHSQSLTLTSTVPGSDLQFYKLDYNGQTFLPLSDTTSLRLHTKLGYGNGYGDTDGLPFYENYTAGGQATVRGFKDGTLGPRNTPATGTYASQGQIYYSDRDTEALGGNILISGGMEYLFPMPFVKDQKSLRTSLFWDFGTVYADKCYLTTTQNCGNINIDQMASSVGVGVTWYSPLGPLSFDLAVPIKKPEDAETQVFQFSLGQTF
>NZ_CP045799.1|WP_024638936.1|4332806_4333235_+|hypothetical-protein
MSREVRQITPDVQEIIQHALRSLLGKGFVIALFGSEDATGAMHYHLRIDHDATGLGIEHHDHVEDGFIDDIFMLATRMKAMLKQRETLSRMHGGSQATGQVRLLTWITEDNSQTVVQTAEAAGRECLSALRERRIINAAQIS
>NZ_CP045799.1|WP_024638935.1|4333509_4334553_+|hypothetical-protein
MQHDTAESLWNSLNTQGRFYPKTHDKKLFEALRQSLGIPPGGDISTHLKNEKIDTTTLVIALLTALQPFSQMLNDIYEMLIDGNVTKSNEQILINFDFDESGNLNFDVNAFRVANKLLTSVAAGISSPAISPRGMDEVARGIYKVLADAYIRTTGKRGSGNRPVIGERNAEPVTSVDPVSDRRVLDWMQPEWPYVATVPMPTLTSGDPIDKALRPYINAVSQLSLRAKRYTDQTHLRTAFSEPLRSWDARAPVLLWGENVFARIMDDHPVRFRWLPAIWHCYEFASKNALERKALADQITRVIEGNFELPPPHPVDKWADQPSRKLCSTAAVGRPEWGSLRRTPNYQ
>NZ_CP045799.1|WP_146052546.1|4334689_4336987_-|hypothetical-protein
MAAFFVPMNSFLVSRFEKQTLSNLVTHCFGSDFPDILQKPQVAYIFSYLKEMKAVSVLLERNYVDKDYLEDFSRYYVKRFGNAGHQCARMHFFTKPVDHRLINTILKAESGAEELALELNESYLGFMVIKPLPKTFIGKTCLKVMSDVDAPRAVDSVADAGVDSTAVESQPQVHEPDIEIGQTGQVGKRKCRLSREYKVDLFGIDLIVQSIAFQEQDKVVSACASTAIWSSLHALKWRDVRAIHSCSEITLNAINHIDGSSNSFPNKELTNKQILRCLDVEGLRHHSEDLKKQKLSEDDFLATVMGHIDSHLPLLVMGSVSKVTDEGTLEDYDAGHAVCILGYKVDSDSVVYVHDDRLGPYARAKLVKLKKYDPNASAEDWALGLQRMIEDTDQWMEPHELIVPEFLAMPTDTKARLPFFYAHYTGQKIASAFAGLVSPLAVSSTEPKIQAQTFEEITYAVKLRSISEIRQEIRTQIAPAEYLDLSTGASFQIGADDLDSWQRDKITFLTSSFARLQWEVQFFYGSVEAFRVFIDASDIPQGNAVSFIYVDNIFLSTPLLTIFATHGSYVEERAAPVHFYQSFLARLRDREETLEEYLDDTYGPLRAPIKLKEQEFLDGKISTNPTRQVLRDPQRKKLAELHGRFAEEKVIYLIWAVAHDGALLIGEEIYLEIGGVEEPCGHPSITKFRPARIAGELWKVDGGWVINPMSGRYSGDYDEAIKFMDNSLEKFRLFFPYDTFDLETLPPKSRHLASVAWNAGIKVNG
>NZ_CP045799.1|WP_024638933.1|4338053_4338515_-|NUDIX-domain-containing-protein
MPRRRLASRILLISSTDRLLLFKIQYKTGALAGMSYWATPGGQLRKDESFETAAARELNEETGVEVRSVGPCISHREFPWRMPDGEDVLAIENYYLVRADADQCSSDFWGSEERGAISEVRWWSQAELAQCEEDVYPPNLMRLFIEALTIATE
>NZ_CP045799.1|WP_024638932.1|4338535_4339186_-|hypothetical-protein
MDLDRLIELYPRIYHMAECGAWDSIRTRGLMSATAVLDHLVVGDGERARFESEHRSEKMDVRAGHPSNIVLRDQKPMPEGRLMQALTDGTTPREWYELINHKVFFWAEEARLHRLLGARDYRRLEHDVLTLDSSALIPAYADAIWLCHMNSGNTWPMPHRRGTEIFRRIPDYPVKRSGNPDKNVVELVVDYAVPDIANFVLEVRRMRGSEVLGVIA
>NZ_CP045799.1|WP_024638931.1|4339189_4340869_-|AAA-family-ATPase
METRQIVVISGKTCSGKSGLAGLLEKEFGFAVVSNRRLIDDPEWRLRMEQPQMIDRRREFGDVDVDQWMLLETQAICKKEKEGRPLVVDHLHTLDQVLQFRQTFGADLVHVHLYASDPTLQERYAKRIEGELDPLSYDEVNQLRDDAEIQALKDDADVRVYTERSDSNDTLVRVAARLHLYTPPEIRCVDVLIGGQYGSEGKGNIVAYLAREYDVMVRVGGPNAGHTVASAIGTFTYHHLPSGSRDVTARLLLGPGMTIHLPGLLREIEECSIGPDRLFIDPQATIIEEADRDAEKVHLVSIIASTGSGSGAAAARRILSRGKTTIRLAKDVDELQPYVGILGNYHGSTSDRLEEAYRSGKSILLEGTQGSGLSIFHGDYPYVTSRDTNVAGCLAEAGISPSRIRKILMVVRPMPIRVGDPDGNEGHTSGMLKHPTTFDAIAEFAGLEADALNTAEKTSTTHRKRKVGWFEWDQFRKACALNAPTDIVLTFADYLKATNRNARRFEQLHSETIKFVEELERVSQAPVSLINTRFSRDPDPSDLRSLIDRRNWTARSDRR

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP045799_3	3.2\|1174720\|18\|NZ_CP045799\|CRT	1174720-1174737	18	NZ_CP045799.1	1174504-1174521	0	1.0
NZ_CP045799_3	3.5\|1174836\|18\|NZ_CP045799\|CRT	1174836-1174853	18	NZ_CP045799.1	1174504-1174521	0	1.0
NZ_CP045799_3	3.3\|1174758\|20\|NZ_CP045799\|CRT	1174758-1174777	20	NZ_CP045799.1	438906-438925	1	0.95
NZ_CP045799_3	3.3\|1174758\|20\|NZ_CP045799\|CRT	1174758-1174777	20	NZ_CP045799.1	600237-600256	1	0.95
NZ_CP045799_3	3.3\|1174758\|20\|NZ_CP045799\|CRT	1174758-1174777	20	NZ_CP045799.1	692317-692336	1	0.95
NZ_CP045799_3	3.3\|1174758\|20\|NZ_CP045799\|CRT	1174758-1174777	20	NZ_CP045799.1	1174464-1174483	1	0.95
NZ_CP045799_3	3.3\|1174758\|20\|NZ_CP045799\|CRT	1174758-1174777	20	NZ_CP045799.1	1174642-1174661	1	0.95
NZ_CP045799_3	3.3\|1174758\|20\|NZ_CP045799\|CRT	1174758-1174777	20	NZ_CP045799.1	1916283-1916302	1	0.95
NZ_CP045799_3	3.3\|1174758\|20\|NZ_CP045799\|CRT	1174758-1174777	20	NZ_CP045799.1	1918007-1918026	1	0.95
NZ_CP045799_3	3.3\|1174758\|20\|NZ_CP045799\|CRT	1174758-1174777	20	NZ_CP045799.1	2228938-2228957	1	0.95
NZ_CP045799_3	3.3\|1174758\|20\|NZ_CP045799\|CRT	1174758-1174777	20	NZ_CP045799.1	4277385-4277404	1	0.95
NZ_CP045799_3	3.3\|1174758\|20\|NZ_CP045799\|CRT	1174758-1174777	20	NZ_CP045799.1	4462561-4462580	1	0.95
NZ_CP045799_3	3.3\|1174758\|20\|NZ_CP045799\|CRT	1174758-1174777	20	NZ_CP045799.1	71502-71521	2	0.9
NZ_CP045799_3	3.3\|1174758\|20\|NZ_CP045799\|CRT	1174758-1174777	20	NZ_CP045799.1	339440-339459	2	0.9
NZ_CP045799_3	3.3\|1174758\|20\|NZ_CP045799\|CRT	1174758-1174777	20	NZ_CP045799.1	533097-533116	2	0.9
NZ_CP045799_3	3.3\|1174758\|20\|NZ_CP045799\|CRT	1174758-1174777	20	NZ_CP045799.1	1080652-1080671	2	0.9
NZ_CP045799_3	3.3\|1174758\|20\|NZ_CP045799\|CRT	1174758-1174777	20	NZ_CP045799.1	1130341-1130360	2	0.9
NZ_CP045799_3	3.3\|1174758\|20\|NZ_CP045799\|CRT	1174758-1174777	20	NZ_CP045799.1	1645320-1645339	2	0.9
NZ_CP045799_3	3.3\|1174758\|20\|NZ_CP045799\|CRT	1174758-1174777	20	NZ_CP045799.1	1849862-1849881	2	0.9
NZ_CP045799_3	3.3\|1174758\|20\|NZ_CP045799\|CRT	1174758-1174777	20	NZ_CP045799.1	2064307-2064326	2	0.9
NZ_CP045799_3	3.3\|1174758\|20\|NZ_CP045799\|CRT	1174758-1174777	20	NZ_CP045799.1	2064555-2064574	2	0.9
NZ_CP045799_3	3.3\|1174758\|20\|NZ_CP045799\|CRT	1174758-1174777	20	NZ_CP045799.1	2173664-2173683	2	0.9
NZ_CP045799_3	3.3\|1174758\|20\|NZ_CP045799\|CRT	1174758-1174777	20	NZ_CP045799.1	2173795-2173814	2	0.9
NZ_CP045799_3	3.3\|1174758\|20\|NZ_CP045799\|CRT	1174758-1174777	20	NZ_CP045799.1	2524297-2524316	2	0.9
NZ_CP045799_3	3.3\|1174758\|20\|NZ_CP045799\|CRT	1174758-1174777	20	NZ_CP045799.1	2829860-2829879	2	0.9
NZ_CP045799_3	3.3\|1174758\|20\|NZ_CP045799\|CRT	1174758-1174777	20	NZ_CP045799.1	3865863-3865882	2	0.9
NZ_CP045799_3	3.3\|1174758\|20\|NZ_CP045799\|CRT	1174758-1174777	20	NZ_CP045799.1	4174873-4174892	2	0.9
NZ_CP045799_3	3.3\|1174758\|20\|NZ_CP045799\|CRT	1174758-1174777	20	NZ_CP045799.1	4265070-4265089	2	0.9
NZ_CP045799_3	3.3\|1174758\|20\|NZ_CP045799\|CRT	1174758-1174777	20	NZ_CP045799.1	4288756-4288775	2	0.9
NZ_CP045799_3	3.3\|1174758\|20\|NZ_CP045799\|CRT	1174758-1174777	20	NZ_CP045799.1	4462312-4462331	2	0.9
NZ_CP045799_3	3.3\|1174758\|20\|NZ_CP045799\|CRT	1174758-1174777	20	NZ_CP045799.1	4462437-4462456	2	0.9
NZ_CP045799_3	3.3\|1174758\|20\|NZ_CP045799\|CRT	1174758-1174777	20	NZ_CP045799.1	4938650-4938669	2	0.9
NZ_CP045799_3	3.3\|1174758\|20\|NZ_CP045799\|CRT	1174758-1174777	20	NZ_CP045799.1	4984154-4984173	2	0.9
NZ_CP045799_3	3.3\|1174758\|20\|NZ_CP045799\|CRT	1174758-1174777	20	NZ_CP045799.1	5322435-5322454	2	0.9
NZ_CP045799_3	3.3\|1174758\|20\|NZ_CP045799\|CRT	1174758-1174777	20	NZ_CP045799.1	5330939-5330958	2	0.9
NZ_CP045799_3	3.3\|1174758\|20\|NZ_CP045799\|CRT	1174758-1174777	20	NZ_CP045799.1	5869893-5869912	2	0.9

1. spacer 3.2|1174720|18|NZ_CP045799|CRT matches to position: 1174504-1174521, mismatch: 0, identity: 1.0

acggcctgccgacgcggc	CRISPR spacer
acggcctgccgacgcggc	Protospacer
******************

2. spacer 3.5|1174836|18|NZ_CP045799|CRT matches to position: 1174504-1174521, mismatch: 0, identity: 1.0

acggcctgccgacgcggc	CRISPR spacer
acggcctgccgacgcggc	Protospacer
******************

3. spacer 3.3|1174758|20|NZ_CP045799|CRT matches to position: 438906-438925, mismatch: 1, identity: 0.95

acggcctgccgacgcggagc	CRISPR spacer
acggcatgccgacgcggagc	Protospacer
***** **************

4. spacer 3.3|1174758|20|NZ_CP045799|CRT matches to position: 600237-600256, mismatch: 1, identity: 0.95

acggcctgccgacgcggagc	CRISPR spacer
acggcatgccgacgcggagc	Protospacer
***** **************

5. spacer 3.3|1174758|20|NZ_CP045799|CRT matches to position: 692317-692336, mismatch: 1, identity: 0.95

acggcctgccgacgcggagc	CRISPR spacer
acggcatgccgacgcggagc	Protospacer
***** **************

6. spacer 3.3|1174758|20|NZ_CP045799|CRT matches to position: 1174464-1174483, mismatch: 1, identity: 0.95

acggcctgccgacgcggagc	CRISPR spacer
acggcatgccgacgcggagc	Protospacer
***** **************

7. spacer 3.3|1174758|20|NZ_CP045799|CRT matches to position: 1174642-1174661, mismatch: 1, identity: 0.95

acggcctgccgacgcggagc	CRISPR spacer
acggcatgccgacgcggagc	Protospacer
***** **************

8. spacer 3.3|1174758|20|NZ_CP045799|CRT matches to position: 1916283-1916302, mismatch: 1, identity: 0.95

acggcctgccgacgcggagc	CRISPR spacer
acggcatgccgacgcggagc	Protospacer
***** **************

9. spacer 3.3|1174758|20|NZ_CP045799|CRT matches to position: 1918007-1918026, mismatch: 1, identity: 0.95

acggcctgccgacgcggagc	CRISPR spacer
acggcatgccgacgcggagc	Protospacer
***** **************

10. spacer 3.3|1174758|20|NZ_CP045799|CRT matches to position: 2228938-2228957, mismatch: 1, identity: 0.95

acggcctgccgacgcggagc	CRISPR spacer
acggcatgccgacgcggagc	Protospacer
***** **************

11. spacer 3.3|1174758|20|NZ_CP045799|CRT matches to position: 4277385-4277404, mismatch: 1, identity: 0.95

acggcctgccgacgcggagc	CRISPR spacer
acggcatgccgacgcggagc	Protospacer
***** **************

12. spacer 3.3|1174758|20|NZ_CP045799|CRT matches to position: 4462561-4462580, mismatch: 1, identity: 0.95

acggcctgccgacgcggagc	CRISPR spacer
acggcatgccgacgcggagc	Protospacer
***** **************

13. spacer 3.3|1174758|20|NZ_CP045799|CRT matches to position: 71502-71521, mismatch: 2, identity: 0.9

acggcctgccgacgcggagc	CRISPR spacer
acggcatgcccacgcggagc	Protospacer
***** **** *********

14. spacer 3.3|1174758|20|NZ_CP045799|CRT matches to position: 339440-339459, mismatch: 2, identity: 0.9

acggcctgccgacgcggagc	CRISPR spacer
acggcatgcccacgcggagc	Protospacer
***** **** *********

15. spacer 3.3|1174758|20|NZ_CP045799|CRT matches to position: 533097-533116, mismatch: 2, identity: 0.9

acggcctgccgacgcggagc	CRISPR spacer
acggcataccgacgcggagc	Protospacer
***** *.************

16. spacer 3.3|1174758|20|NZ_CP045799|CRT matches to position: 1080652-1080671, mismatch: 2, identity: 0.9

acggcctgccgacgcggagc	CRISPR spacer
acggcatgccaacgcggagc	Protospacer
***** ****.*********

17. spacer 3.3|1174758|20|NZ_CP045799|CRT matches to position: 1130341-1130360, mismatch: 2, identity: 0.9

acggcctgccgacgcggagc	CRISPR spacer
acggcatgccaacgcggagc	Protospacer
***** ****.*********

18. spacer 3.3|1174758|20|NZ_CP045799|CRT matches to position: 1645320-1645339, mismatch: 2, identity: 0.9

acggcctgccgacgcggagc	CRISPR spacer
actgcatgccgacgcggagc	Protospacer
** ** **************

19. spacer 3.3|1174758|20|NZ_CP045799|CRT matches to position: 1849862-1849881, mismatch: 2, identity: 0.9

acggcctgccgacgcggagc	CRISPR spacer
actgcatgccgacgcggagc	Protospacer
** ** **************

20. spacer 3.3|1174758|20|NZ_CP045799|CRT matches to position: 2064307-2064326, mismatch: 2, identity: 0.9

acggcctgccgacgcggagc	CRISPR spacer
acggcatgacgacgcggagc	Protospacer
***** ** ***********

21. spacer 3.3|1174758|20|NZ_CP045799|CRT matches to position: 2064555-2064574, mismatch: 2, identity: 0.9

acggcctgccgacgcggagc	CRISPR spacer
acggcatgacgacgcggagc	Protospacer
***** ** ***********

22. spacer 3.3|1174758|20|NZ_CP045799|CRT matches to position: 2173664-2173683, mismatch: 2, identity: 0.9

acggcctgccgacgcggagc	CRISPR spacer
acggcatgcccacgcggagc	Protospacer
***** **** *********

23. spacer 3.3|1174758|20|NZ_CP045799|CRT matches to position: 2173795-2173814, mismatch: 2, identity: 0.9

acggcctgccgacgcggagc	CRISPR spacer
acggcatgcccacgcggagc	Protospacer
***** **** *********

24. spacer 3.3|1174758|20|NZ_CP045799|CRT matches to position: 2524297-2524316, mismatch: 2, identity: 0.9

acggcctgccgacgcggagc	CRISPR spacer
acggcatgcccacgcggagc	Protospacer
***** **** *********

25. spacer 3.3|1174758|20|NZ_CP045799|CRT matches to position: 2829860-2829879, mismatch: 2, identity: 0.9

acggcctgccgacgcggagc	CRISPR spacer
acggcatgacgacgcggagc	Protospacer
***** ** ***********

26. spacer 3.3|1174758|20|NZ_CP045799|CRT matches to position: 3865863-3865882, mismatch: 2, identity: 0.9

acggcctgccgacgcggagc	CRISPR spacer
actgcatgccgacgcggagc	Protospacer
** ** **************

27. spacer 3.3|1174758|20|NZ_CP045799|CRT matches to position: 4174873-4174892, mismatch: 2, identity: 0.9

acggcctgccgacgcggagc	CRISPR spacer
actgcatgccgacgcggagc	Protospacer
** ** **************

28. spacer 3.3|1174758|20|NZ_CP045799|CRT matches to position: 4265070-4265089, mismatch: 2, identity: 0.9

acggcctgccgacgcggagc	CRISPR spacer
acggcatgcccacgcggagc	Protospacer
***** **** *********

29. spacer 3.3|1174758|20|NZ_CP045799|CRT matches to position: 4288756-4288775, mismatch: 2, identity: 0.9

acggcctgccgacgcggagc	CRISPR spacer
acggcatgacgacgcggagc	Protospacer
***** ** ***********

30. spacer 3.3|1174758|20|NZ_CP045799|CRT matches to position: 4462312-4462331, mismatch: 2, identity: 0.9

acggcctgccgacgcggagc	CRISPR spacer
acggcatgccgacgcagagc	Protospacer
***** *********.****

31. spacer 3.3|1174758|20|NZ_CP045799|CRT matches to position: 4462437-4462456, mismatch: 2, identity: 0.9

acggcctgccgacgcggagc	CRISPR spacer
acggcatgccgacgcagagc	Protospacer
***** *********.****

32. spacer 3.3|1174758|20|NZ_CP045799|CRT matches to position: 4938650-4938669, mismatch: 2, identity: 0.9

acggcctgccgacgcggagc	CRISPR spacer
actgcatgccgacgcggagc	Protospacer
** ** **************

33. spacer 3.3|1174758|20|NZ_CP045799|CRT matches to position: 4984154-4984173, mismatch: 2, identity: 0.9

acggcctgccgacgcggagc	CRISPR spacer
acggcatgccaacgcggagc	Protospacer
***** ****.*********

34. spacer 3.3|1174758|20|NZ_CP045799|CRT matches to position: 5322435-5322454, mismatch: 2, identity: 0.9

acggcctgccgacgcggagc	CRISPR spacer
acggcatgcccacgcggagc	Protospacer
***** **** *********

35. spacer 3.3|1174758|20|NZ_CP045799|CRT matches to position: 5330939-5330958, mismatch: 2, identity: 0.9

acggcctgccgacgcggagc	CRISPR spacer
acggcatgcccacgcggagc	Protospacer
***** **** *********

36. spacer 3.3|1174758|20|NZ_CP045799|CRT matches to position: 5869893-5869912, mismatch: 2, identity: 0.9

acggcctgccgacgcggagc	CRISPR spacer
acggcatgccaacgcggagc	Protospacer
***** ****.*********

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP045799_1	1.2\|322844\|30\|NZ_CP045799\|PILER-CR	322844-322873	30	NZ_CP050314	Shewanella aestuarii strain PN3F2 plasmid pPN3F2_1, complete sequence	126064-126093	6	0.8
NZ_CP045799_1	1.2\|322844\|30\|NZ_CP045799\|PILER-CR	322844-322873	30	NZ_CP050314	Shewanella aestuarii strain PN3F2 plasmid pPN3F2_1, complete sequence	126325-126354	6	0.8
NZ_CP045799_1	1.2\|322844\|30\|NZ_CP045799\|PILER-CR	322844-322873	30	NZ_CP050314	Shewanella aestuarii strain PN3F2 plasmid pPN3F2_1, complete sequence	126847-126876	6	0.8
NZ_CP045799_1	1.2\|322844\|30\|NZ_CP045799\|PILER-CR	322844-322873	30	NZ_CP050314	Shewanella aestuarii strain PN3F2 plasmid pPN3F2_1, complete sequence	171367-171396	6	0.8
NZ_CP045799_1	1.2\|322844\|30\|NZ_CP045799\|PILER-CR	322844-322873	30	NZ_CP050314	Shewanella aestuarii strain PN3F2 plasmid pPN3F2_1, complete sequence	126571-126600	7	0.767
NZ_CP045799_1	1.2\|322844\|30\|NZ_CP045799\|PILER-CR	322844-322873	30	NZ_CP050314	Shewanella aestuarii strain PN3F2 plasmid pPN3F2_1, complete sequence	127108-127137	7	0.767
NZ_CP045799_1	1.2\|322844\|30\|NZ_CP045799\|PILER-CR	322844-322873	30	NZ_CP050314	Shewanella aestuarii strain PN3F2 plasmid pPN3F2_1, complete sequence	170692-170721	7	0.767
NZ_CP045799_1	1.2\|322844\|30\|NZ_CP045799\|PILER-CR	322844-322873	30	NZ_CP050314	Shewanella aestuarii strain PN3F2 plasmid pPN3F2_1, complete sequence	170845-170874	7	0.767
NZ_CP045799_1	1.2\|322844\|30\|NZ_CP045799\|PILER-CR	322844-322873	30	NZ_CP050314	Shewanella aestuarii strain PN3F2 plasmid pPN3F2_1, complete sequence	171091-171120	7	0.767
NZ_CP045799_1	1.2\|322844\|30\|NZ_CP045799\|PILER-CR	322844-322873	30	NZ_CP050314	Shewanella aestuarii strain PN3F2 plasmid pPN3F2_1, complete sequence	171628-171657	7	0.767
NZ_CP045799_1	1.2\|322844\|30\|NZ_CP045799\|PILER-CR	322844-322873	30	NZ_CP045074	Paracoccus kondratievae strain BJQ0001 plasmid unnamed1, complete sequence	343841-343870	7	0.767
NZ_CP045799_1	1.2\|322844\|30\|NZ_CP045799\|PILER-CR	322844-322873	30	NC_002679	Mesorhizobium japonicum MAFF 303099 plasmid pMLa, complete sequence	233075-233104	7	0.767
NZ_CP045799_1	1.2\|322844\|30\|NZ_CP045799\|PILER-CR	322844-322873	30	NZ_CP029732	Citrobacter sp. CRE-46 strain AR_0157 plasmid unnamed4, complete sequence	56133-56162	8	0.733
NZ_CP045799_1	1.2\|322844\|30\|NZ_CP045799\|PILER-CR	322844-322873	30	NC_021871	Salmonella bongori N268-08 plasmid RM1, complete sequence	10091-10120	8	0.733
NZ_CP045799_1	1.2\|322844\|30\|NZ_CP045799\|PILER-CR	322844-322873	30	NZ_CP017992	Enterobacter cloacae complex sp. ECNIH7 plasmid pENT-2c5, complete sequence	18512-18541	8	0.733
NZ_CP045799_1	1.2\|322844\|30\|NZ_CP045799\|PILER-CR	322844-322873	30	NZ_CP028348	Novosphingobium sp. THN1 plasmid pTHN, complete sequence	591618-591647	8	0.733
NZ_CP045799_1	1.2\|322844\|30\|NZ_CP045799\|PILER-CR	322844-322873	30	NZ_CP020948	Rhizobium sp. CIAT894 plasmid pRheCIAT894a, complete sequence	89269-89298	8	0.733
NZ_CP045799_1	1.2\|322844\|30\|NZ_CP045799\|PILER-CR	322844-322873	30	NZ_AP014705	Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence	554236-554265	8	0.733
NZ_CP045799_1	1.2\|322844\|30\|NZ_CP045799\|PILER-CR	322844-322873	30	KM389233	UNVERIFIED: Pseudomonas phage F_TK1727sp/MX560 clone contig00001 genomic sequence	17669-17698	8	0.733
NZ_CP045799_1	1.2\|322844\|30\|NZ_CP045799\|PILER-CR	322844-322873	30	NZ_CP007050	Rhizobium leguminosarum bv. trifolii WSM1689 plasmid unnamed, complete sequence	12445-12474	8	0.733
NZ_CP045799_1	1.2\|322844\|30\|NZ_CP045799\|PILER-CR	322844-322873	30	NZ_CP016617	Microvirga ossetica strain V5/3m plasmid unnamed1, complete sequence	202819-202848	8	0.733
NZ_CP045799_1	1.2\|322844\|30\|NZ_CP045799\|PILER-CR	322844-322873	30	NZ_CP017244	Rhizobium etli 8C-3 plasmid pRsp8C3c, complete sequence	855424-855453	8	0.733
NZ_CP045799_1	1.2\|322844\|30\|NZ_CP045799\|PILER-CR	322844-322873	30	MH719191	Pseudomonas phage Fc22, complete genome	9286-9315	8	0.733
NZ_CP045799_1	1.2\|322844\|30\|NZ_CP045799\|PILER-CR	322844-322873	30	MH719195	Pseudomonas phage Ps59, complete genome	7844-7873	8	0.733
NZ_CP045799_1	1.2\|322844\|30\|NZ_CP045799\|PILER-CR	322844-322873	30	NC_019849	Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence	166637-166666	9	0.7
NZ_CP045799_1	1.2\|322844\|30\|NZ_CP045799\|PILER-CR	322844-322873	30	NC_017326	Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence	166432-166461	9	0.7
NZ_CP045799_1	1.2\|322844\|30\|NZ_CP045799\|PILER-CR	322844-322873	30	NC_017323	Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence	1401720-1401749	9	0.7
NZ_CP045799_1	1.2\|322844\|30\|NZ_CP045799\|PILER-CR	322844-322873	30	NZ_CP009146	Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence	160595-160624	9	0.7
NZ_CP045799_1	1.2\|322844\|30\|NZ_CP045799\|PILER-CR	322844-322873	30	NC_018701	Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence	160482-160511	9	0.7
NZ_CP045799_1	1.2\|322844\|30\|NZ_CP045799\|PILER-CR	322844-322873	30	NZ_CP021802	Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence	426581-426610	9	0.7
NZ_CP045799_1	1.2\|322844\|30\|NZ_CP045799\|PILER-CR	322844-322873	30	NZ_CP021820	Sinorhizobium meliloti strain M162 plasmid psymB, complete sequence	504936-504965	9	0.7
NZ_CP045799_1	1.2\|322844\|30\|NZ_CP045799\|PILER-CR	322844-322873	30	NZ_CP021831	Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence	411595-411624	9	0.7
NZ_CP045799_1	1.2\|322844\|30\|NZ_CP045799\|PILER-CR	322844-322873	30	NZ_CP021814	Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence	40424-40453	9	0.7
NZ_CP045799_1	1.2\|322844\|30\|NZ_CP045799\|PILER-CR	322844-322873	30	NZ_CP021810	Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence	949276-949305	9	0.7
NZ_CP045799_1	1.2\|322844\|30\|NZ_CP045799\|PILER-CR	322844-322873	30	NZ_CP021218	Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence	313794-313823	9	0.7
NZ_CP045799_1	1.2\|322844\|30\|NZ_CP045799\|PILER-CR	322844-322873	30	NZ_CP026527	Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence	163201-163230	9	0.7
NZ_CP045799_1	1.2\|322844\|30\|NZ_CP045799\|PILER-CR	322844-322873	30	NC_003078	Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence	1580632-1580661	9	0.7
NZ_CP045799_1	1.2\|322844\|30\|NZ_CP045799\|PILER-CR	322844-322873	30	NZ_CP019586	Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence	1539823-1539852	9	0.7
NZ_CP045799_1	1.2\|322844\|30\|NZ_CP045799\|PILER-CR	322844-322873	30	NZ_CP021799	Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence	1645564-1645593	9	0.7
NZ_CP045799_1	1.2\|322844\|30\|NZ_CP045799\|PILER-CR	322844-322873	30	NZ_CP021828	Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence	1145155-1145184	9	0.7
NZ_CP045799_1	1.2\|322844\|30\|NZ_CP045799\|PILER-CR	322844-322873	30	NZ_CP021823	Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence	1264975-1265004	9	0.7
NZ_CP045799_1	1.2\|322844\|30\|NZ_CP045799\|PILER-CR	322844-322873	30	NZ_CP021795	Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence	803352-803381	9	0.7
NZ_CP045799_1	1.2\|322844\|30\|NZ_CP045799\|PILER-CR	322844-322873	30	NZ_CP021806	Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence	855339-855368	9	0.7
NZ_CP045799_1	1.2\|322844\|30\|NZ_CP045799\|PILER-CR	322844-322873	30	NZ_CP019484	Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence	107986-108015	9	0.7
NZ_CP045799_1	1.2\|322844\|30\|NZ_CP045799\|PILER-CR	322844-322873	30	NZ_CP019487	Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence	1471759-1471788	9	0.7
NZ_CP045799_1	1.2\|322844\|30\|NZ_CP045799\|PILER-CR	322844-322873	30	NC_020560	Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence	1580646-1580675	9	0.7
NZ_CP045799_1	1.2\|322844\|30\|NZ_CP045799\|PILER-CR	322844-322873	30	NZ_CP045800	Pseudomonas syringae USA011 plasmid pUSA011-1, complete sequence	27285-27314	9	0.7
NZ_CP045799_1	1.2\|322844\|30\|NZ_CP045799\|PILER-CR	322844-322873	30	NC_006548	Pseudomonas phage B3, complete genome	8473-8502	9	0.7
NZ_CP045799_1	1.2\|322844\|30\|NZ_CP045799\|PILER-CR	322844-322873	30	AF232233	Bacteriophage B3, complete genome	8473-8502	9	0.7
NZ_CP045799_1	1.2\|322844\|30\|NZ_CP045799\|PILER-CR	322844-322873	30	NZ_CP021653	Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence	1505147-1505176	10	0.667
NZ_CP045799_1	1.2\|322844\|30\|NZ_CP045799\|PILER-CR	322844-322873	30	NZ_CP021767	Ralstonia solanacearum strain RS 489 plasmid unnamed, complete sequence	1505125-1505154	10	0.667
NZ_CP045799_1	1.2\|322844\|30\|NZ_CP045799\|PILER-CR	322844-322873	30	NZ_CP012688	Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence	1505154-1505183	10	0.667
NZ_CP045799_1	1.2\|322844\|30\|NZ_CP045799\|PILER-CR	322844-322873	30	NZ_CP030263	Ensifer adhaerens strain Corn53 plasmid AA, complete sequence	903720-903749	10	0.667
NZ_CP045799_1	1.2\|322844\|30\|NZ_CP045799\|PILER-CR	322844-322873	30	CP047139	Ralstonia solanacearum strain CFBP 8695 plasmid unnamed, complete sequence	1415363-1415392	10	0.667
NZ_CP045799_1	1.2\|322844\|30\|NZ_CP045799\|PILER-CR	322844-322873	30	CP047137	Ralstonia solanacearum strain CFBP 8697 plasmid unnamed, complete sequence	1360637-1360666	10	0.667
NZ_CP045799_1	1.2\|322844\|30\|NZ_CP045799\|PILER-CR	322844-322873	30	NC_020062	Rhizobium tropici CIAT 899 plasmid pRtrCIAT899c, complete sequence	1583526-1583555	10	0.667
NZ_CP045799_1	1.2\|322844\|30\|NZ_CP045799\|PILER-CR	322844-322873	30	NZ_CP015881	Ensifer adhaerens strain Casida A plasmid pCasidaAA, complete sequence	1269519-1269548	10	0.667

1. spacer 1.2|322844|30|NZ_CP045799|PILER-CR matches to NZ_CP050314 (Shewanella aestuarii strain PN3F2 plasmid pPN3F2_1, complete sequence) position: , mismatch: 6, identity: 0.8

ggcaaaggcgaagtcgccaaggccgatgca	CRISPR spacer
gctaaaggcgaagttgccaaggccgaaacg	Protospacer
* .***********.*********** .*.

2. spacer 1.2|322844|30|NZ_CP045799|PILER-CR matches to NZ_CP050314 (Shewanella aestuarii strain PN3F2 plasmid pPN3F2_1, complete sequence) position: , mismatch: 6, identity: 0.8

ggcaaaggcgaagtcgccaaggccgatgca	CRISPR spacer
gctaaaggcgaagttgccaaggccgaaacg	Protospacer
* .***********.*********** .*.

3. spacer 1.2|322844|30|NZ_CP045799|PILER-CR matches to NZ_CP050314 (Shewanella aestuarii strain PN3F2 plasmid pPN3F2_1, complete sequence) position: , mismatch: 6, identity: 0.8

ggcaaaggcgaagtcgccaaggccgatgca	CRISPR spacer
gctaaaggcgaagttgccaaggccgaaacg	Protospacer
* .***********.*********** .*.

4. spacer 1.2|322844|30|NZ_CP045799|PILER-CR matches to NZ_CP050314 (Shewanella aestuarii strain PN3F2 plasmid pPN3F2_1, complete sequence) position: , mismatch: 6, identity: 0.8

ggcaaaggcgaagtcgccaaggccgatgca	CRISPR spacer
gctaaaggcgaagttgccaaggccgaaacg	Protospacer
* .***********.*********** .*.

5. spacer 1.2|322844|30|NZ_CP045799|PILER-CR matches to NZ_CP050314 (Shewanella aestuarii strain PN3F2 plasmid pPN3F2_1, complete sequence) position: , mismatch: 7, identity: 0.767

ggcaaaggcgaagtcgccaaggccgatgca	CRISPR spacer
gctaaaggcgaagttgccaagcccgaaacg	Protospacer
* .***********.****** **** .*.

6. spacer 1.2|322844|30|NZ_CP045799|PILER-CR matches to NZ_CP050314 (Shewanella aestuarii strain PN3F2 plasmid pPN3F2_1, complete sequence) position: , mismatch: 7, identity: 0.767

ggcaaaggcgaagtcgccaaggccgatgca	CRISPR spacer
gctaaaggcgaagttgccaaggtcgaaacg	Protospacer
* .***********.*******.*** .*.

7. spacer 1.2|322844|30|NZ_CP045799|PILER-CR matches to NZ_CP050314 (Shewanella aestuarii strain PN3F2 plasmid pPN3F2_1, complete sequence) position: , mismatch: 7, identity: 0.767

ggcaaaggcgaagtcgccaaggccgatgca	CRISPR spacer
gctaaaggcgaagttgccaagcccgaaacg	Protospacer
* .***********.****** **** .*.

8. spacer 1.2|322844|30|NZ_CP045799|PILER-CR matches to NZ_CP050314 (Shewanella aestuarii strain PN3F2 plasmid pPN3F2_1, complete sequence) position: , mismatch: 7, identity: 0.767

ggcaaaggcgaagtcgccaaggccgatgca	CRISPR spacer
gctaaaggcgaagttgccaagcccgaaacg	Protospacer
* .***********.****** **** .*.

9. spacer 1.2|322844|30|NZ_CP045799|PILER-CR matches to NZ_CP050314 (Shewanella aestuarii strain PN3F2 plasmid pPN3F2_1, complete sequence) position: , mismatch: 7, identity: 0.767

ggcaaaggcgaagtcgccaaggccgatgca	CRISPR spacer
gctaaaggcgaagttgccaagcccgaaacg	Protospacer
* .***********.****** **** .*.

10. spacer 1.2|322844|30|NZ_CP045799|PILER-CR matches to NZ_CP050314 (Shewanella aestuarii strain PN3F2 plasmid pPN3F2_1, complete sequence) position: , mismatch: 7, identity: 0.767

ggcaaaggcgaagtcgccaaggccgatgca	CRISPR spacer
gctaaaggcgaagttgccaaggtcgaaacg	Protospacer
* .***********.*******.*** .*.

11. spacer 1.2|322844|30|NZ_CP045799|PILER-CR matches to NZ_CP045074 (Paracoccus kondratievae strain BJQ0001 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

ggcaaaggcgaagtcgccaaggccgatgca	CRISPR spacer
ggggccggcaatgtcgccaaggccgatgct	Protospacer
** .  ***.* *****************

12. spacer 1.2|322844|30|NZ_CP045799|PILER-CR matches to NC_002679 (Mesorhizobium japonicum MAFF 303099 plasmid pMLa, complete sequence) position: , mismatch: 7, identity: 0.767

ggcaaaggcgaagtcgccaaggccgatgca	CRISPR spacer
cgcaaaggcgatgccgccaaggccaagcaa	Protospacer
 ********** *.**********.*   *

13. spacer 1.2|322844|30|NZ_CP045799|PILER-CR matches to NZ_CP029732 (Citrobacter sp. CRE-46 strain AR_0157 plasmid unnamed4, complete sequence) position: , mismatch: 8, identity: 0.733

ggcaaaggcgaagtcgccaaggccgatgca	CRISPR spacer
ctgaagggcgaagtcgccaacgccgatatg	Protospacer
   **.************** ******...

14. spacer 1.2|322844|30|NZ_CP045799|PILER-CR matches to NC_021871 (Salmonella bongori N268-08 plasmid RM1, complete sequence) position: , mismatch: 8, identity: 0.733

ggcaaaggcgaagtcgccaaggccgatgca	CRISPR spacer
ctgaagggcgaagtcgccaacgccgatatg	Protospacer
   **.************** ******...

15. spacer 1.2|322844|30|NZ_CP045799|PILER-CR matches to NZ_CP017992 (Enterobacter cloacae complex sp. ECNIH7 plasmid pENT-2c5, complete sequence) position: , mismatch: 8, identity: 0.733

ggcaaaggcgaagtcgccaaggccgatgca	CRISPR spacer
ctgaagggcgaagtcgccaacgccgatatg	Protospacer
   **.************** ******...

16. spacer 1.2|322844|30|NZ_CP045799|PILER-CR matches to NZ_CP028348 (Novosphingobium sp. THN1 plasmid pTHN, complete sequence) position: , mismatch: 8, identity: 0.733

ggcaaaggcgaagtcgccaaggccgatgca	CRISPR spacer
cggcagtacgaaggcgccaaggccgatgcc	Protospacer
 *  *. .***** ***************

17. spacer 1.2|322844|30|NZ_CP045799|PILER-CR matches to NZ_CP020948 (Rhizobium sp. CIAT894 plasmid pRheCIAT894a, complete sequence) position: , mismatch: 8, identity: 0.733

ggcaaaggcgaagtcgccaaggccgatgca	CRISPR spacer
gtacagggcaaagtcgccaaggccgatatt	Protospacer
*   *.***.*****************..

18. spacer 1.2|322844|30|NZ_CP045799|PILER-CR matches to NZ_AP014705 (Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence) position: , mismatch: 8, identity: 0.733

ggcaaaggcgaagtcgccaaggccgatgca	CRISPR spacer
cccgaaggcgaagtagccgaggccgatcgc	Protospacer
  *.********** ***.********

19. spacer 1.2|322844|30|NZ_CP045799|PILER-CR matches to KM389233 (UNVERIFIED: Pseudomonas phage F_TK1727sp/MX560 clone contig00001 genomic sequence) position: , mismatch: 8, identity: 0.733

ggcaaaggcgaagtcgccaaggccgatgca	CRISPR spacer
tcaaatggcgaagtcgccaaggcccttggc	Protospacer
   ** ******************  **

20. spacer 1.2|322844|30|NZ_CP045799|PILER-CR matches to NZ_CP007050 (Rhizobium leguminosarum bv. trifolii WSM1689 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.733

ggcaaaggcgaagtcgccaaggccgatgca	CRISPR spacer
gtgcaaggcaaggtcgccaaggccgatatc	Protospacer
*   *****.*.***************..

21. spacer 1.2|322844|30|NZ_CP045799|PILER-CR matches to NZ_CP016617 (Microvirga ossetica strain V5/3m plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.733

ggcaaaggcgaagtcgccaaggccgatgca	CRISPR spacer
cgcaaggtcgaagtcgccaaggcccgtctc	Protospacer
 ****.* **************** .* .

22. spacer 1.2|322844|30|NZ_CP045799|PILER-CR matches to NZ_CP017244 (Rhizobium etli 8C-3 plasmid pRsp8C3c, complete sequence) position: , mismatch: 8, identity: 0.733

ggcaaaggcgaagtcgccaaggccgatgca	CRISPR spacer
atcgttcgcgaaggcgccaaggccgttgca	Protospacer
. *.   ****** *********** ****

23. spacer 1.2|322844|30|NZ_CP045799|PILER-CR matches to MH719191 (Pseudomonas phage Fc22, complete genome) position: , mismatch: 8, identity: 0.733

ggcaaaggcgaagtcgccaaggccgatgca	CRISPR spacer
tcaaatggcgaagtcgccaaggcccttggc	Protospacer
   ** ******************  **

24. spacer 1.2|322844|30|NZ_CP045799|PILER-CR matches to MH719195 (Pseudomonas phage Ps59, complete genome) position: , mismatch: 8, identity: 0.733

ggcaaaggcgaagtcgccaaggccgatgca	CRISPR spacer
tcgaatggcgaagtcgccaaggcccttggc	Protospacer
   ** ******************  **

25. spacer 1.2|322844|30|NZ_CP045799|PILER-CR matches to NC_019849 (Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence) position: , mismatch: 9, identity: 0.7

ggcaaaggcgaagtcgccaaggccgatgca	CRISPR spacer
tatctgcgcgaagtcgccaaggccgatgac	Protospacer
 ..  . *********************

26. spacer 1.2|322844|30|NZ_CP045799|PILER-CR matches to NC_017326 (Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence) position: , mismatch: 9, identity: 0.7

ggcaaaggcgaagtcgccaaggccgatgca	CRISPR spacer
tatctgcgcgaagtcgccaaggccgatgac	Protospacer
 ..  . *********************

27. spacer 1.2|322844|30|NZ_CP045799|PILER-CR matches to NC_017323 (Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence) position: , mismatch: 9, identity: 0.7

ggcaaaggcgaagtcgccaaggccgatgca	CRISPR spacer
tatctgcgcgaagtcgccaaggccgatgac	Protospacer
 ..  . *********************

28. spacer 1.2|322844|30|NZ_CP045799|PILER-CR matches to NZ_CP009146 (Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence) position: , mismatch: 9, identity: 0.7

ggcaaaggcgaagtcgccaaggccgatgca	CRISPR spacer
tatctgcgcgaagtcgccaaggccgatgac	Protospacer
 ..  . *********************

29. spacer 1.2|322844|30|NZ_CP045799|PILER-CR matches to NC_018701 (Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence) position: , mismatch: 9, identity: 0.7

ggcaaaggcgaagtcgccaaggccgatgca	CRISPR spacer
tatctgcgcgaagtcgccaaggccgatgac	Protospacer
 ..  . *********************

30. spacer 1.2|322844|30|NZ_CP045799|PILER-CR matches to NZ_CP021802 (Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence) position: , mismatch: 9, identity: 0.7

ggcaaaggcgaagtcgccaaggccgatgca	CRISPR spacer
tatctgcgcgaagtcgccaaggccgatgac	Protospacer
 ..  . *********************

31. spacer 1.2|322844|30|NZ_CP045799|PILER-CR matches to NZ_CP021820 (Sinorhizobium meliloti strain M162 plasmid psymB, complete sequence) position: , mismatch: 9, identity: 0.7

ggcaaaggcgaagtcgccaaggccgatgca	CRISPR spacer
tatctgcgcgaagtcgccaaggccgatgac	Protospacer
 ..  . *********************

32. spacer 1.2|322844|30|NZ_CP045799|PILER-CR matches to NZ_CP021831 (Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence) position: , mismatch: 9, identity: 0.7

ggcaaaggcgaagtcgccaaggccgatgca	CRISPR spacer
tatctgcgcgaagtcgccaaggccgatgac	Protospacer
 ..  . *********************

33. spacer 1.2|322844|30|NZ_CP045799|PILER-CR matches to NZ_CP021814 (Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence) position: , mismatch: 9, identity: 0.7

ggcaaaggcgaagtcgccaaggccgatgca	CRISPR spacer
tatctgcgcgaagtcgccaaggccgatgac	Protospacer
 ..  . *********************

34. spacer 1.2|322844|30|NZ_CP045799|PILER-CR matches to NZ_CP021810 (Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence) position: , mismatch: 9, identity: 0.7

ggcaaaggcgaagtcgccaaggccgatgca	CRISPR spacer
tatctgcgcgaagtcgccaaggccgatgac	Protospacer
 ..  . *********************

35. spacer 1.2|322844|30|NZ_CP045799|PILER-CR matches to NZ_CP021218 (Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence) position: , mismatch: 9, identity: 0.7

ggcaaaggcgaagtcgccaaggccgatgca	CRISPR spacer
tatctgcgcgaagtcgccaaggccgatgac	Protospacer
 ..  . *********************

36. spacer 1.2|322844|30|NZ_CP045799|PILER-CR matches to NZ_CP026527 (Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence) position: , mismatch: 9, identity: 0.7

ggcaaaggcgaagtcgccaaggccgatgca	CRISPR spacer
tatctgcgcgaagtcgccaaggccgatgac	Protospacer
 ..  . *********************

37. spacer 1.2|322844|30|NZ_CP045799|PILER-CR matches to NC_003078 (Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence) position: , mismatch: 9, identity: 0.7

ggcaaaggcgaagtcgccaaggccgatgca	CRISPR spacer
tatctgcgcgaagtcgccaaggccgatgac	Protospacer
 ..  . *********************

38. spacer 1.2|322844|30|NZ_CP045799|PILER-CR matches to NZ_CP019586 (Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence) position: , mismatch: 9, identity: 0.7

ggcaaaggcgaagtcgccaaggccgatgca	CRISPR spacer
tatctgcgcgaagtcgccaaggccgatgac	Protospacer
 ..  . *********************

39. spacer 1.2|322844|30|NZ_CP045799|PILER-CR matches to NZ_CP021799 (Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence) position: , mismatch: 9, identity: 0.7

ggcaaaggcgaagtcgccaaggccgatgca	CRISPR spacer
tatctgcgcgaagtcgccaaggccgatgac	Protospacer
 ..  . *********************

40. spacer 1.2|322844|30|NZ_CP045799|PILER-CR matches to NZ_CP021828 (Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence) position: , mismatch: 9, identity: 0.7

ggcaaaggcgaagtcgccaaggccgatgca	CRISPR spacer
tatctgcgcgaagtcgccaaggccgatgac	Protospacer
 ..  . *********************

41. spacer 1.2|322844|30|NZ_CP045799|PILER-CR matches to NZ_CP021823 (Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence) position: , mismatch: 9, identity: 0.7

ggcaaaggcgaagtcgccaaggccgatgca	CRISPR spacer
tatctgcgcgaagtcgccaaggccgatgac	Protospacer
 ..  . *********************

42. spacer 1.2|322844|30|NZ_CP045799|PILER-CR matches to NZ_CP021795 (Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence) position: , mismatch: 9, identity: 0.7

ggcaaaggcgaagtcgccaaggccgatgca	CRISPR spacer
tatctgcgcgaagtcgccaaggccgatgac	Protospacer
 ..  . *********************

43. spacer 1.2|322844|30|NZ_CP045799|PILER-CR matches to NZ_CP021806 (Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence) position: , mismatch: 9, identity: 0.7

ggcaaaggcgaagtcgccaaggccgatgca	CRISPR spacer
tatctgcgcgaagtcgccaaggccgatgac	Protospacer
 ..  . *********************

44. spacer 1.2|322844|30|NZ_CP045799|PILER-CR matches to NZ_CP019484 (Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence) position: , mismatch: 9, identity: 0.7

ggcaaaggcgaagtcgccaaggccgatgca	CRISPR spacer
tatctgcgcgaagtcgccaaggccgatgac	Protospacer
 ..  . *********************

45. spacer 1.2|322844|30|NZ_CP045799|PILER-CR matches to NZ_CP019487 (Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence) position: , mismatch: 9, identity: 0.7

ggcaaaggcgaagtcgccaaggccgatgca	CRISPR spacer
tatctgcgcgaagtcgccaaggccgatgac	Protospacer
 ..  . *********************

46. spacer 1.2|322844|30|NZ_CP045799|PILER-CR matches to NC_020560 (Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence) position: , mismatch: 9, identity: 0.7

ggcaaaggcgaagtcgccaaggccgatgca	CRISPR spacer
tatctgcgcgaagtcgccaaggccgatgac	Protospacer
 ..  . *********************

47. spacer 1.2|322844|30|NZ_CP045799|PILER-CR matches to NZ_CP045800 (Pseudomonas syringae USA011 plasmid pUSA011-1, complete sequence) position: , mismatch: 9, identity: 0.7

ggcaaaggcgaagtcgccaaggccgatgca	CRISPR spacer
actaaagccgaagtcgccaaggccggactg	Protospacer
. .**** *****************.  ..

48. spacer 1.2|322844|30|NZ_CP045799|PILER-CR matches to NC_006548 (Pseudomonas phage B3, complete genome) position: , mismatch: 9, identity: 0.7

ggcaaaggcgaagtcgccaaggccgatgca	CRISPR spacer
tcgaatggcgaagtcgccaaggccctaggc	Protospacer
   ** ******************   *

49. spacer 1.2|322844|30|NZ_CP045799|PILER-CR matches to AF232233 (Bacteriophage B3, complete genome) position: , mismatch: 9, identity: 0.7

ggcaaaggcgaagtcgccaaggccgatgca	CRISPR spacer
tcgaatggcgaagtcgccaaggccctaggc	Protospacer
   ** ******************   *

50. spacer 1.2|322844|30|NZ_CP045799|PILER-CR matches to NZ_CP021653 (Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.667

ggcaaaggcgaagtcgccaaggccgatgca	CRISPR spacer
tcggaagtcgaagtcgccaaggccgcctgg	Protospacer
   .*** ***************** .  .

51. spacer 1.2|322844|30|NZ_CP045799|PILER-CR matches to NZ_CP021767 (Ralstonia solanacearum strain RS 489 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.667

ggcaaaggcgaagtcgccaaggccgatgca	CRISPR spacer
tcggaagtcgaagtcgccaaggccgcctgg	Protospacer
   .*** ***************** .  .

52. spacer 1.2|322844|30|NZ_CP045799|PILER-CR matches to NZ_CP012688 (Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.667

ggcaaaggcgaagtcgccaaggccgatgca	CRISPR spacer
tcggaagtcgaagtcgccaaggccgcctgg	Protospacer
   .*** ***************** .  .

53. spacer 1.2|322844|30|NZ_CP045799|PILER-CR matches to NZ_CP030263 (Ensifer adhaerens strain Corn53 plasmid AA, complete sequence) position: , mismatch: 10, identity: 0.667

ggcaaaggcgaagtcgccaaggccgatgca	CRISPR spacer
tatctgcgcgaggtcgccaaggccgatgac	Protospacer
 ..  . ****.****************

54. spacer 1.2|322844|30|NZ_CP045799|PILER-CR matches to CP047139 (Ralstonia solanacearum strain CFBP 8695 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.667

ggcaaaggcgaagtcgccaaggccgatgca	CRISPR spacer
tcggaagtcgaagtcgccaaggccgcctgg	Protospacer
   .*** ***************** .  .

55. spacer 1.2|322844|30|NZ_CP045799|PILER-CR matches to CP047137 (Ralstonia solanacearum strain CFBP 8697 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.667

ggcaaaggcgaagtcgccaaggccgatgca	CRISPR spacer
tcggaagtcgaagtcgccaaggccgcctgg	Protospacer
   .*** ***************** .  .

56. spacer 1.2|322844|30|NZ_CP045799|PILER-CR matches to NC_020062 (Rhizobium tropici CIAT 899 plasmid pRtrCIAT899c, complete sequence) position: , mismatch: 10, identity: 0.667

ggcaaaggcgaagtcgccaaggccgatgca	CRISPR spacer
tatctgcgcgaagtcgccaagggcgatgac	Protospacer
 ..  . *************** *****

57. spacer 1.2|322844|30|NZ_CP045799|PILER-CR matches to NZ_CP015881 (Ensifer adhaerens strain Casida A plasmid pCasidaAA, complete sequence) position: , mismatch: 10, identity: 0.667

ggcaaaggcgaagtcgccaaggccgatgca	CRISPR spacer
tatctgcgcgaggtcgccaaggccgatgac	Protospacer
 ..  . ****.****************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

2345042 : 2400245

Pseudomonas_phage(59.18%)

tRNA,capsid,terminase,head,holin,tail,protease,portal,integrase

attL 2352445:2352498|attR 2402562:2402615

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004408427.1\|2345042_2346965_+\|tRNA	threonine--tRNA ligase	A0A2K9L297	Tupanvirus	4.1e-125	37.7
WP_003367017.1\|2346982_2347516_+	translation initiation factor IF-3	A0A2I7S9Q1	Vibrio_phage	8.9e-14	37.3
WP_002553160.1\|2347576_2347771_+	50S ribosomal protein L35	NA	NA	NA	NA
WP_002553161.1\|2347800_2348157_+	50S ribosomal protein L20	NA	NA	NA	NA
WP_003367019.1\|2348261_2349278_+\|tRNA	phenylalanine--tRNA ligase subunit alpha	A0A2K9L3A8	Tupanvirus	8.4e-29	39.3
WP_024639020.1\|2349305_2351684_+\|tRNA	phenylalanine--tRNA ligase subunit beta	NA	NA	NA	NA
WP_002553164.1\|2351687_2351990_+	integration host factor subunit alpha	A0A0H3UZA0	Geobacillus_virus	1.8e-11	38.9
WP_004408375.1\|2351970_2352327_+	MerR family transcriptional regulator	NA	NA	NA	NA
2352445:2352498	attL	NA	NA	NA	NA
WP_024639021.1\|2352580_2353693_-\|integrase	tyrosine-type recombinase/integrase	A0A0U4JIT5	Pseudomonas_phage	3.1e-32	31.4
WP_005753573.1\|2353692_2353905_-	hypothetical protein	NA	NA	NA	NA
WP_032611107.1\|2353953_2354856_-	phosphohydrolase	A0A1V0ECI3	Caulobacter_phage	6.2e-68	45.2
WP_024639023.1\|2354925_2355261_-	hypothetical protein	NA	NA	NA	NA
WP_080393533.1\|2355537_2355777_+	hypothetical protein	NA	NA	NA	NA
WP_024639025.1\|2356534_2356723_+	hypothetical protein	NA	NA	NA	NA
WP_024639026.1\|2356791_2357568_-	DUF2786 domain-containing protein	A0A2P9JZH4	Alteromonadaceae_phage	4.5e-14	28.5
WP_024639027.1\|2357660_2358068_-	hypothetical protein	A0A0U4JNY7	Pseudomonas_phage	9.4e-40	62.8
WP_024639028.1\|2358175_2358370_+	hypothetical protein	NA	NA	NA	NA
WP_024639029.1\|2358396_2358675_-	hypothetical protein	NA	NA	NA	NA
WP_024639030.1\|2358671_2359259_-	hypothetical protein	NA	NA	NA	NA
WP_024639031.1\|2359258_2359597_-	hypothetical protein	NA	NA	NA	NA
WP_024639032.1\|2359887_2360664_-	hypothetical protein	A0A1B0YZY3	Pseudomonas_phage	2.8e-93	65.5
WP_024639033.1\|2360737_2361139_-	helix-turn-helix transcriptional regulator	A0A2H4JA92	uncultured_Caudovirales_phage	1.2e-18	61.7
WP_024639034.1\|2361491_2362322_-	DUF3037 domain-containing protein	NA	NA	NA	NA
WP_024639035.1\|2362318_2363065_-	hypothetical protein	NA	NA	NA	NA
WP_020304839.1\|2363205_2363445_-	hypothetical protein	NA	NA	NA	NA
WP_024639036.1\|2363456_2364152_-	helix-turn-helix domain-containing protein	A5VW98	Enterobacteria_phage	4.7e-39	47.4
WP_058401079.1\|2364235_2364475_+	hypothetical protein	A0A2H4J0V8	uncultured_Caudovirales_phage	8.5e-25	73.4
WP_024639038.1\|2364699_2365368_+	DNA-binding protein	A0A1B0YZY9	Pseudomonas_phage	1.4e-53	53.5
WP_050586751.1\|2365379_2366159_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_024639040.1\|2366155_2366836_+	replication P family protein	A0A2D1GNB3	Pseudomonas_phage	4.6e-31	42.7
WP_024639041.1\|2366832_2367129_+	DUF1364 domain-containing protein	A0A2D1GNQ4	Pseudomonas_phage	1.5e-42	84.5
WP_024639042.1\|2367125_2367314_+	DUF1382 family protein	A0A2H4J9M2	uncultured_Caudovirales_phage	1.2e-18	80.0
WP_024639043.1\|2367310_2367520_+	hypothetical protein	NA	NA	NA	NA
WP_024639044.1\|2367516_2367948_+	VRR-NUC domain-containing protein	A0A2D1GNH3	Pseudomonas_phage	2.2e-55	74.8
WP_024639045.1\|2367944_2368256_+	hypothetical protein	A0A2H4J249	uncultured_Caudovirales_phage	3.4e-13	44.1
WP_024639046.1\|2368252_2369530_+\|integrase	site-specific integrase	A0A2D1GND4	Pseudomonas_phage	1.3e-122	54.3
WP_024639047.1\|2369532_2369748_+	hypothetical protein	NA	NA	NA	NA
WP_024639048.1\|2369744_2370065_+	hypothetical protein	A0A2D1GNG3	Pseudomonas_phage	1.8e-38	75.5
WP_024639049.1\|2370067_2370454_+	antitermination protein Q	A0A1W6JTD2	Pseudomonas_phage	3.9e-35	55.1
WP_129398657.1\|2370586_2371084_+	hypothetical protein	NA	NA	NA	NA
WP_024639051.1\|2371182_2371506_+\|holin	phage holin, lambda family	A0A1V0DYG4	Shewanella_phage	8.9e-09	37.8
WP_024639052.1\|2371502_2371922_+	hypothetical protein	NA	NA	NA	NA
WP_024639053.1\|2371950_2373576_-	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	2.0e-56	42.1
WP_024639055.1\|2374521_2374881_+	hypothetical protein	H2BDJ7	Pseudomonas_virus	7.1e-07	34.9
WP_024639056.1\|2374871_2375267_+	HNH endonuclease	A0A2D1GNP5	Pseudomonas_phage	1.7e-57	76.0
WP_024639057.1\|2375434_2375920_+\|terminase	phage terminase small subunit P27 family	A0A2D1GNP3	Pseudomonas_phage	2.7e-78	90.1
WP_024639058.1\|2375920_2377654_+\|terminase	terminase large subunit	A0A2D1GNU5	Pseudomonas_phage	0.0e+00	91.5
WP_153795658.1\|2377662_2377974_-	hypothetical protein	NA	NA	NA	NA
WP_080393532.1\|2377972_2379118_+\|portal	phage portal protein	A0A1V0E8B9	Vibrio_phage	3.2e-125	57.8
WP_024639060.1\|2379121_2379985_+\|protease	Clp protease ClpP	A0A1V0E8B8	Vibrio_phage	2.7e-92	62.5
WP_024639061.1\|2379981_2381175_+\|capsid	phage major capsid protein	H2BDB0	Pseudomonas_virus	1.2e-138	67.4
WP_024639062.1\|2381225_2381642_+	hypothetical protein	NA	NA	NA	NA
WP_024639063.1\|2381645_2382122_+\|head,tail	phage gp6-like head-tail connector protein	G3ENA1	Psychrobacter_phage	1.6e-14	38.1
WP_024639064.1\|2382121_2382460_+\|head	phage head closure protein	A0A1J0GUY4	Halomonas_phage	4.8e-29	60.9
WP_024639065.1\|2382452_2382938_+	HK97 gp10 family phage protein	A0A0U3TGT7	Pseudomonas_phage	1.3e-56	67.7
WP_024639066.1\|2382937_2383306_+	DUF3168 domain-containing protein	Q9MCA6	Pseudomonas_phage	1.6e-38	64.2
WP_024639067.1\|2383369_2383873_+\|tail	phage major tail protein	A0A0U4ISC1	Pseudomonas_phage	1.9e-50	61.0
WP_024639068.1\|2383882_2384320_+\|tail	phage tail assembly protein	Q9MCA4	Pseudomonas_phage	1.5e-38	68.4
WP_099315314.1\|2384600_2385389_+	hypothetical protein	A0A2H4J8D6	uncultured_Caudovirales_phage	4.6e-59	47.5
WP_024639069.1\|2385446_2388017_+\|tail	phage tail tape measure protein	A0A2H4PI09	Pseudomonas_phage	3.5e-180	50.4
WP_024639070.1\|2388016_2388361_+\|tail	tail protein	A0A2D1GNJ1	Pseudomonas_phage	6.7e-31	52.6
WP_153795659.1\|2388396_2388549_+	hypothetical protein	NA	NA	NA	NA
WP_024639072.1\|2388550_2388817_-	hypothetical protein	NA	NA	NA	NA
WP_024639073.1\|2388899_2389193_-	hypothetical protein	NA	NA	NA	NA
WP_024639074.1\|2389356_2390055_+\|tail	phage minor tail protein L	A0A2D1GNF3	Pseudomonas_phage	5.3e-107	80.1
WP_024639075.1\|2390057_2390840_+\|tail	phage tail protein	A0A2D1GNP8	Pseudomonas_phage	1.2e-120	74.6
WP_024639076.1\|2390836_2391424_+\|tail	tail assembly protein	A0A2D1GNM2	Pseudomonas_phage	2.9e-74	73.1
WP_024639077.1\|2391478_2395234_+\|tail	phage tail protein	A0A2D1GNE3	Pseudomonas_phage	0.0e+00	61.2
WP_024639079.1\|2395550_2396237_+	hypothetical protein	A0A2D1GNS6	Pseudomonas_phage	1.0e-38	39.5
WP_153795660.1\|2396260_2397643_+\|tail	tail fiber domain-containing protein	A0A059VJZ6	Pseudomonas_phage	1.8e-42	45.5
WP_153795661.1\|2397707_2398241_+	glycoside hydrolase family 19 protein	A0A059VA40	Pseudomonas_phage	8.4e-89	92.1
WP_032610755.1\|2398237_2398768_+	DUF2514 domain-containing protein	A0A059VF51	Pseudomonas_phage	9.7e-61	80.9
WP_153795698.1\|2398824_2399004_+	hypothetical protein	A0A059VK06	Pseudomonas_phage	6.4e-09	56.6
WP_153795662.1\|2399000_2400245_+	SGNH/GDSL hydrolase family protein	A0A059VA35	Pseudomonas_phage	2.8e-207	87.2
2402562:2402615	attR	NA	NA	NA	NA

DBSCAN-SWA_2

3601801 : 3609543

uncultured_Caudovirales_phage(71.43%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003411623.1\|3601801_3603103_-	MFS transporter	Q6JIH2	Burkholderia_virus	1.4e-60	36.2
WP_024639665.1\|3603337_3603730_+	sulfurtransferase complex subunit TusD	A0A2H4JA39	uncultured_Caudovirales_phage	6.3e-57	82.3
WP_024639666.1\|3603731_3604094_+	sulfurtransferase complex subunit TusC	A0A2H4J8C0	uncultured_Caudovirales_phage	1.9e-36	61.7
WP_024639667.1\|3604093_3604393_+	sulfurtransferase complex subunit TusB	A0A2H4JG28	uncultured_Caudovirales_phage	9.4e-29	61.6
WP_003317943.1\|3604389_3604725_+	TusE/DsrC/DsvC family sulfur relay protein	A0A2H4J8B6	uncultured_Caudovirales_phage	1.2e-43	78.4
WP_024639668.1\|3604721_3605723_+	glycosyl transferase family protein	A0A2H4JBY5	uncultured_Caudovirales_phage	8.8e-164	84.2
WP_024639669.1\|3605818_3606817_+	glutathione S-transferase family protein	NA	NA	NA	NA
WP_024639670.1\|3606867_3608262_-	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA
WP_003317946.1\|3608262_3609543_-\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	4.1e-97	45.8

DBSCAN-SWA_3

4196167 : 4264701

Bacillus_phage(33.33%)

protease,tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_104722995.1\|4196167_4197543_-\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	1.9e-76	52.8
WP_104722995.1\|4197860_4199235_+\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	1.9e-76	52.8
WP_002554613.1\|4199692_4199872_+	hypothetical protein	NA	NA	NA	NA
WP_003407712.1\|4199950_4200490_-	DUF2058 domain-containing protein	NA	NA	NA	NA
WP_024640384.1\|4200520_4201354_-	nucleoside triphosphate pyrophosphohydrolase	NA	NA	NA	NA
WP_011268592.1\|4201481_4203725_-	GTP diphosphokinase	NA	NA	NA	NA
WP_024640383.1\|4203881_4205237_-	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	F5CA72	Streptococcus_phi-m46.1-like_phage	5.9e-30	27.1
WP_003407727.1\|4205236_4206139_-	cysteine synthase CysM	A0A1X9I5F1	Streptococcus_phage	3.9e-54	40.1
WP_011268595.1\|4206389_4209143_+	response regulator	A0A1V0SGX0	Hokovirus	2.2e-47	29.4
WP_003407729.1\|4209223_4209661_+	hypothetical protein	NA	NA	NA	NA
WP_003407731.1\|4209657_4210065_+	META domain-containing protein	NA	NA	NA	NA
WP_011268596.1\|4210235_4210703_-	TlpA family protein disulfide reductase	NA	NA	NA	NA
WP_003314592.1\|4210831_4211185_+	arsenate reductase (glutaredoxin)	A0A2H4J8T1	uncultured_Caudovirales_phage	7.4e-25	48.7
WP_003363251.1\|4211181_4211787_+	NAD(P)H:quinone oxidoreductase	NA	NA	NA	NA
WP_003314590.1\|4211886_4212558_+	3-methyladenine DNA glycosylase	NA	NA	NA	NA
WP_003407740.1\|4212564_4213389_-\|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	A0A0U2S5Z2	Escherichia_phage	1.2e-105	72.0
WP_003314586.1\|4213583_4214078_+\|protease	SprT family zinc-dependent metalloprotease	A0A2I7S9Y6	Vibrio_phage	3.7e-06	31.6
WP_003407743.1\|4214144_4215497_-	dicarboxylate/amino acid:cation symporter	NA	NA	NA	NA
WP_011268599.1\|4215891_4217238_-	two-component sensor histidine kinase	NA	NA	NA	NA
WP_003407750.1\|4217234_4217912_-	response regulator	NA	NA	NA	NA
WP_003407754.1\|4217939_4218290_-	hypothetical protein	NA	NA	NA	NA
WP_003407755.1\|4218462_4219251_+	dienelactone hydrolase family protein	NA	NA	NA	NA
WP_104722995.1\|4219357_4220732_+\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	1.9e-76	52.8
WP_024640679.1\|4220902_4221637_+	4'-phosphopantetheinyl transferase superfamily protein	NA	NA	NA	NA
WP_024640678.1\|4221637_4222384_-	siderophore-iron reductase FhuF	NA	NA	NA	NA
WP_024640677.1\|4222341_4223952_-	HAMP domain-containing protein	W8CYF6	Bacillus_phage	2.4e-17	25.1
WP_024640676.1\|4223956_4224700_-	response regulator transcription factor	W8CYM9	Bacillus_phage	6.3e-34	35.3
WP_024640675.1\|4225408_4228321_+	ribonucleoside-diphosphate reductase subunit alpha	A0A2H4P767	Pseudomonas_phage	8.8e-180	45.9
WP_002554639.1\|4228586_4229834_+	ribonucleotide-diphosphate reductase subunit beta	U5Q1G6	Bacillus_phage	1.1e-30	27.4
WP_153795674.1\|4230093_4250088_-	amino acid adenylation domain-containing protein	A0A2K9KZV5	Tupanvirus	1.4e-175	27.7
WP_057392289.1\|4251213_4253160_+	AAA family ATPase	NA	NA	NA	NA
WP_024639713.1\|4253362_4254613_-	restriction endonuclease	E5E3X4	Burkholderia_phage	5.6e-91	46.7
WP_080269153.1\|4254573_4255077_-	DNA mismatch endonuclease Vsr	E5E3X5	Burkholderia_phage	2.6e-47	57.8
WP_024639714.1\|4255130_4256555_-	DNA (cytosine-5-)-methyltransferase	E5E3X6	Burkholderia_phage	7.0e-106	49.9
WP_024639715.1\|4257144_4257675_+	Bro-N domain-containing protein	A0A290FZK7	Caldibacillus_phage	2.1e-07	29.1
WP_024639716.1\|4257727_4258018_-	hypothetical protein	NA	NA	NA	NA
WP_024639717.1\|4258493_4261610_-\|protease	autotransporter serine protease	NA	NA	NA	NA
WP_024639718.1\|4261701_4264701_-\|protease	autotransporter serine protease	NA	NA	NA	NA

DBSCAN-SWA_4

4853562 : 4862092

Pseudomonas_phage(87.5%)

tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_153795682.1\|4853562_4854807_-	SGNH/GDSL hydrolase family protein	A0A059VA35	Pseudomonas_phage	3.8e-209	87.9
WP_153795699.1\|4854803_4854983_-	hypothetical protein	A0A059VK06	Pseudomonas_phage	1.7e-09	55.4
WP_024638367.1\|4855039_4855570_-	DUF2514 domain-containing protein	A0A059VF51	Pseudomonas_phage	7.9e-55	79.6
WP_153795683.1\|4855566_4856172_-	glycoside hydrolase family 19 protein	A0A059VA40	Pseudomonas_phage	1.3e-66	68.5
WP_153795684.1\|4856236_4857619_-\|tail	tail fiber domain-containing protein	A0A059VJZ6	Pseudomonas_phage	1.1e-42	44.4
WP_024640309.1\|4857648_4858311_-	hypothetical protein	A0A059VF40	Pseudomonas_phage	2.9e-123	96.4
WP_024640308.1\|4858307_4858676_-	hypothetical protein	A0A059VJS9	Pseudomonas_phage	3.9e-61	95.1
WP_024640305.1\|4860821_4861106_-	STAS-like domain-containing protein	NA	NA	NA	NA
WP_152981404.1\|4861108_4862092_-	hypothetical protein	A4PE73	Ralstonia_virus	1.3e-50	40.4

DBSCAN-SWA_5

5284699 : 5320355

Pseudomonas_phage(62.96%)

tail,lysis,tRNA,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_024639964.1\|5284699_5285911_-\|tRNA	tyrosine--tRNA ligase	NA	NA	NA	NA
WP_003401947.1\|5286112_5287540_+	peptidoglycan DD-metalloendopeptidase family protein	A8ATH6	Listeria_phage	4.2e-18	44.7
WP_003401948.1\|5287543_5288638_+	anhydro-N-acetylmuramic acid kinase	NA	NA	NA	NA
WP_002551953.1\|5288700_5289051_-	iron-sulfur cluster insertion protein ErpA	A0A2H4N7M3	Lake_Baikal_phage	7.4e-25	50.5
WP_011269099.1\|5289252_5290287_-	N-acetyl-gamma-glutamyl-phosphate reductase	NA	NA	NA	NA
WP_003401951.1\|5290420_5290849_+	protoporphyrinogen oxidase HemJ	NA	NA	NA	NA
WP_003401952.1\|5290934_5291849_+	DUF805 domain-containing protein	NA	NA	NA	NA
WP_024639965.1\|5291905_5292682_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_003401954.1\|5292785_5293124_+	histidine triad nucleotide-binding protein	NA	NA	NA	NA
WP_003401955.1\|5293245_5293893_+	2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinone monooxygenase	NA	NA	NA	NA
WP_003316303.1\|5293962_5294757_-	adenosylmethionine decarboxylase	NA	NA	NA	NA
WP_024639966.1\|5294999_5295422_-	OsmC family protein	NA	NA	NA	NA
WP_024639967.1\|5295623_5296268_+	cAMP-activated global transcriptional regulator CRP	NA	NA	NA	NA
WP_024639968.1\|5296279_5296975_-	lipoate--protein ligase family protein	NA	NA	NA	NA
WP_024639969.1\|5297009_5297846_-	indole-3-glycerol phosphate synthase TrpC	A0A0P0IR83	Acinetobacter_phage	4.4e-68	55.8
WP_024639970.1\|5297842_5298892_-	anthranilate phosphoribosyltransferase	A0A0N7IRD9	Acinetobacter_phage	9.1e-111	58.0
WP_003394873.1\|5298913_5299513_-	aminodeoxychorismate/anthranilate synthase component II	A0A0P0IKJ1	Acinetobacter_phage	3.0e-74	64.7
WP_024639971.1\|5299924_5300437_-\|lysis	lysis protein	B5TK84	Pseudomonas_phage	4.7e-28	48.4
WP_024639972.1\|5300433_5300979_-	glycoside hydrolase family 19 protein	A0A2H4JHX4	uncultured_Caudovirales_phage	1.5e-69	73.3
WP_024639973.1\|5301211_5301709_-\|tail	tail fiber assembly protein	NA	NA	NA	NA
WP_024639974.1\|5301985_5303044_-	hypothetical protein	NA	NA	NA	NA
WP_024639975.1\|5303299_5303866_-\|tail	phage tail protein	B5TK80	Pseudomonas_phage	1.5e-43	46.4
WP_024639976.1\|5303873_5305337_-	hypothetical protein	B5TK79	Pseudomonas_phage	1.7e-86	40.9
WP_003401992.1\|5305347_5305947_-	DUF2313 domain-containing protein	B5TK76	Pseudomonas_phage	1.9e-84	71.9
WP_024639977.1\|5305934_5306975_-\|plate	baseplate J/gp47 family protein	B5TK75	Pseudomonas_phage	2.1e-131	70.1
WP_024639978.1\|5306964_5307363_-	hypothetical protein	B5TK74	Pseudomonas_phage	2.6e-42	62.9
WP_003372720.1\|5307359_5307872_-\|plate	phage baseplate assembly protein	B5TK73	Pseudomonas_phage	1.4e-64	73.8
WP_003401994.1\|5307868_5308996_-	hypothetical protein	B5TK72	Pseudomonas_phage	2.7e-113	60.2
WP_024639979.1\|5308999_5310424_-	2-hydroxyacid dehydrogenase	B5TK71	Pseudomonas_phage	1.5e-108	45.6
WP_024639980.1\|5310420_5312703_-\|tail	phage tail tape measure protein	U5P420	Shigella_phage	2.9e-69	40.2
WP_003316280.1\|5312833_5313130_-\|tail	phage tail assembly protein	B5TK69	Pseudomonas_phage	4.3e-34	76.0
WP_011269114.1\|5313126_5313474_-\|tail	phage tail protein	B5TK68	Pseudomonas_phage	5.0e-42	70.4
WP_003422754.1\|5313534_5315031_-\|tail	bacteriophage Mu tail sheath	B5TK67	Pseudomonas_phage	2.2e-235	80.7
WP_024639981.1\|5315049_5315238_-	DUF2635 domain-containing protein	B5TK66	Pseudomonas_phage	1.8e-14	73.5
WP_011269116.1\|5315234_5315825_-	hypothetical protein	B5TK65	Pseudomonas_phage	2.4e-52	52.6
WP_024639982.1\|5315870_5316209_-	hypothetical protein	A0A059VJW1	Pseudomonas_phage	9.0e-20	59.2
WP_003411734.1\|5316189_5316579_-	hypothetical protein	A0A059VK40	Pseudomonas_phage	2.3e-43	76.4
WP_024639983.1\|5316701_5317874_-	cellulase family glycosylhydrolase	NA	NA	NA	NA
WP_011269119.1\|5317885_5318071_-	Com family DNA-binding transcriptional regulator	B5TK59	Pseudomonas_phage	1.3e-12	89.5
WP_011269120.1\|5318343_5318787_-	hypothetical protein	A0A2H4J8A5	uncultured_Caudovirales_phage	4.6e-24	45.8
WP_024639984.1\|5318976_5319588_+	helix-turn-helix domain-containing protein	A0A0M4QWY1	Salmonella_phage	2.0e-49	49.2
WP_024639985.1\|5319742_5319991_+	DUF1654 domain-containing protein	NA	NA	NA	NA
WP_003316268.1\|5320112_5320355_+	transcriptional regulator	A0A2H4J8B4	uncultured_Caudovirales_phage	1.9e-16	51.2

DBSCAN-SWA_6

5378939 : 5449941

Bacillus_virus(18.18%)

protease,holin,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_104722995.1\|5378939_5380315_-\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	1.9e-76	52.8
WP_024640642.1\|5381913_5384202_+	pyrroloquinoline quinone biosynthesis protein PqqF	A0A2H4UVM3	Bodo_saltans_virus	8.8e-18	27.6
WP_003422658.1\|5384337_5384412_+	pyrroloquinoline quinone precursor peptide PqqA	NA	NA	NA	NA
WP_024640643.1\|5384500_5385412_+	pyrroloquinoline quinone biosynthesis protein PqqB	NA	NA	NA	NA
WP_003402120.1\|5385420_5386176_+	pyrroloquinoline-quinone synthase PqqC	NA	NA	NA	NA
WP_011269164.1\|5386172_5386457_+	pyrroloquinoline quinone biosynthesis peptide chaperone PqqD	NA	NA	NA	NA
WP_024640644.1\|5386449_5387619_+	pyrroloquinoline quinone biosynthesis protein PqqE	NA	NA	NA	NA
WP_024640645.1\|5387581_5389408_+	S9 family peptidase	NA	NA	NA	NA
WP_002555565.1\|5389463_5389625_-	YqaE/Pmp3 family membrane protein	NA	NA	NA	NA
WP_024640646.1\|5390028_5391807_-	acyl-CoA dehydrogenase	NA	NA	NA	NA
WP_024640647.1\|5391976_5393275_-	GGDEF domain-containing protein	NA	NA	NA	NA
WP_011269169.1\|5394389_5396195_-	acyl-CoA dehydrogenase	NA	NA	NA	NA
WP_003419817.1\|5396528_5396825_-	hypothetical protein	NA	NA	NA	NA
WP_011269170.1\|5396978_5397659_-	dethiobiotin synthase	NA	NA	NA	NA
WP_024638682.1\|5397683_5398493_-	malonyl-ACP O-methyltransferase BioC	NA	NA	NA	NA
WP_024638683.1\|5398485_5399217_-	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_024638684.1\|5399209_5400400_-	8-amino-7-oxononanoate synthase	NA	NA	NA	NA
WP_003372416.1\|5400464_5401523_-	biotin synthase BioB	NA	NA	NA	NA
WP_003402142.1\|5401613_5402348_+	ComF family protein	NA	NA	NA	NA
WP_024638685.1\|5402486_5403251_+	TOBE domain-containing protein	NA	NA	NA	NA
WP_024638686.1\|5403332_5405249_+	PhoX family phosphatase	NA	NA	NA	NA
WP_003402149.1\|5405517_5406351_-	phosphodiesterase	NA	NA	NA	NA
WP_024638687.1\|5406376_5407408_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.2e-27	35.0
WP_024638688.1\|5407404_5408199_-	ABC transporter permease subunit	NA	NA	NA	NA
WP_003402154.1\|5408195_5409065_-	ABC transporter permease	NA	NA	NA	NA
WP_003402156.1\|5409064_5410066_-	extracellular solute-binding protein	NA	NA	NA	NA
WP_024638689.1\|5410049_5411069_-	substrate-binding domain-containing protein	NA	NA	NA	NA
WP_003411854.1\|5411262_5412237_+	serine/threonine protein kinase	NA	NA	NA	NA
WP_024638690.1\|5412549_5413437_+	EamA family transporter RarD	NA	NA	NA	NA
WP_011269179.1\|5413634_5414177_-	glycine cleavage system protein R	NA	NA	NA	NA
WP_024638691.1\|5414500_5416678_+	malate synthase G	NA	NA	NA	NA
WP_003402175.1\|5416743_5417190_-	response regulator	A0A220YL79	Alteromonas_virus	2.2e-05	29.6
WP_024638692.1\|5417414_5419349_+	CBS domain-containing protein	NA	NA	NA	NA
WP_003402180.1\|5419345_5420059_+	3'-5' exonuclease	A0A1P8DIX6	Virus_Rctr197k	3.5e-05	28.2
WP_003316170.1\|5420084_5420387_-	cell division protein ZapA	NA	NA	NA	NA
WP_024638693.1\|5420383_5420617_-	hypothetical protein	NA	NA	NA	NA
WP_011269183.1\|5421028_5422654_+	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	8.6e-68	44.6
WP_011269184.1\|5423396_5423855_-\|transposase	transposase	NA	NA	NA	NA
WP_003402189.1\|5423981_5425085_-	GlxA family transcriptional regulator	NA	NA	NA	NA
WP_024640220.1\|5425868_5426816_+\|holin	choline ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_002555599.1\|5426883_5427729_+\|holin	choline ABC transporter permease subunit	NA	NA	NA	NA
WP_011269186.1\|5427725_5428904_+\|holin	choline ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	2.9e-25	36.4
WP_024640219.1\|5429162_5430416_+	serine hydroxymethyltransferase	A0A240F3L3	Aeromonas_phage	7.0e-102	54.0
WP_024640218.1\|5430433_5431684_+	sarcosine oxidase subunit beta family protein	NA	NA	NA	NA
WP_003316160.1\|5431699_5431996_+	sarcosine oxidase subunit delta	NA	NA	NA	NA
WP_024640217.1\|5431992_5435013_+	sarcosine oxidase subunit alpha	NA	NA	NA	NA
WP_024640216.1\|5435063_5435696_+	sarcosine oxidase subunit gamma family protein	NA	NA	NA	NA
WP_003402204.1\|5435901_5436759_+	formyltetrahydrofolate deformylase	NA	NA	NA	NA
WP_024640215.1\|5436867_5438067_+	formaldehyde dehydrogenase, glutathione-independent	A0A2K9L7I1	Tupanvirus	2.2e-12	27.7
WP_080393617.1\|5439554_5440529_-	RHS repeat-associated core domain-containing protein	A0A1W5K0N1	Bacteriophage	8.1e-29	41.8
WP_024640212.1\|5440638_5446464_-	hypothetical protein	NA	NA	NA	NA
WP_003402209.1\|5446688_5447252_+	DUF2780 domain-containing protein	NA	NA	NA	NA
WP_050586769.1\|5447231_5448299_-	RHS repeat-associated core domain-containing protein	B6SD27	Bacteriophage	1.5e-28	38.3
WP_003402215.1\|5448349_5449243_-	acyltransferase	NA	NA	NA	NA
WP_003402218.1\|5449437_5449941_+\|protease	ATP-dependent zinc protease	NA	NA	NA	NA

DBSCAN-SWA_7

5527334 : 5535693

Bacillus_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003372639.1\|5527334_5528525_+	methionine adenosyltransferase	A0A2H4PQS6	Staphylococcus_phage	1.5e-117	57.1
WP_146052534.1\|5528786_5528900_-	DUF1534 domain-containing protein	NA	NA	NA	NA
WP_129450208.1\|5528976_5529090_-	DUF1534 domain-containing protein	NA	NA	NA	NA
WP_104722995.1\|5529293_5530669_-\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	1.9e-76	52.8
WP_024640554.1\|5530931_5532617_+	NAD-dependent DNA ligase LigB	A0A1Y0SVC9	Pseudomonas_phage	1.3e-26	23.4
WP_003405184.1\|5532657_5533068_+	DUF1090 domain-containing protein	NA	NA	NA	NA
WP_003405186.1\|5533114_5533516_-	membrane protein	A0A2H4J146	uncultured_Caudovirales_phage	8.4e-41	74.0
WP_003405188.1\|5533630_5535022_-	heavy metal sensor histidine kinase	W8CYF6	Bacillus_phage	6.8e-21	29.1
WP_003405189.1\|5535018_5535693_-	heavy metal response regulator transcription factor	W8CYM9	Bacillus_phage	2.1e-36	38.9

DBSCAN-SWA_8

5689856 : 5742436

Paramecium_bursaria_Chlorella_virus(20.0%)

plate,protease,integrase

attL 5687752:5687794|attR 5712668:5712710

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
5687752:5687794	attL	NA	NA	NA	NA
WP_024640505.1\|5689856_5691176_+\|integrase	integrase arm-type DNA-binding domain-containing protein	A0A1B0VMI6	Pseudomonas_phage	1.4e-68	38.8
WP_024640504.1\|5692106_5693087_+\|integrase	integrase	NA	NA	NA	NA
WP_024640503.1\|5693083_5693359_+	hypothetical protein	NA	NA	NA	NA
WP_080393638.1\|5693456_5694767_-	DUF4263 domain-containing protein	NA	NA	NA	NA
WP_024640501.1\|5695389_5697012_+	hypothetical protein	NA	NA	NA	NA
WP_024640500.1\|5697004_5697463_+	nucleoside 2-deoxyribosyltransferase	A0A218KC29	Bacillus_phage	1.2e-11	39.4
WP_152981411.1\|5697740_5699396_+	hypothetical protein	NA	NA	NA	NA
WP_152981410.1\|5699532_5700276_+	hypothetical protein	NA	NA	NA	NA
WP_024640498.1\|5700846_5701161_+	type II toxin-antitoxin system RelE/ParE family toxin	A0A141GEX6	Brucella_phage	1.4e-14	47.6
WP_024640497.1\|5701136_5701502_+	putative addiction module antidote protein	NA	NA	NA	NA
WP_024640496.1\|5701594_5702239_-	phosphoglycerate kinase	NA	NA	NA	NA
WP_024640495.1\|5702338_5702680_-	hypothetical protein	NA	NA	NA	NA
WP_024640494.1\|5702867_5703290_+	DUF1493 family protein	NA	NA	NA	NA
WP_003342475.1\|5703843_5704929_+	hypothetical protein	A0A1S5SAB0	Streptococcus_phage	3.4e-68	39.9
WP_024640493.1\|5705084_5705822_+	hypothetical protein	NA	NA	NA	NA
WP_024640492.1\|5705833_5706307_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_024640490.1\|5707053_5707623_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_004407013.1\|5707783_5708278_+	hypothetical protein	NA	NA	NA	NA
WP_024640489.1\|5708549_5709824_-	OprD family porin	NA	NA	NA	NA
WP_004407009.1\|5710469_5711576_-	agmatine deiminase	A7IVE6	Paramecium_bursaria_Chlorella_virus	6.0e-105	50.3
WP_003372277.1\|5711581_5712460_-	N-carbamoylputrescine amidase	A7IVZ1	Paramecium_bursaria_Chlorella_virus	2.7e-76	48.5
WP_024640488.1\|5712804_5715717_-	aminotransferase	A0A1V0SKB7	Klosneuvirus	1.0e-18	23.8
5712668:5712710	attR	NA	NA	NA	NA
WP_024640487.1\|5715965_5717048_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	4.1e-98	53.9
WP_024640486.1\|5717128_5717674_+	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A291LA62	Escherichia_phage	1.0e-52	58.0
WP_032607501.1\|5717844_5719653_+	sensor histidine kinase	NA	NA	NA	NA
WP_004406997.1\|5719649_5721041_+	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA
WP_024640485.1\|5721027_5721501_+	thioesterase	NA	NA	NA	NA
WP_024640484.1\|5722048_5722891_-	3'(2'),5'-bisphosphate nucleotidase CysQ	NA	NA	NA	NA
WP_003372295.1\|5722887_5723454_-	ADP compounds hydrolase NudE	NA	NA	NA	NA
WP_003343604.1\|5723551_5724214_+	GMP/IMP nucleotidase	NA	NA	NA	NA
WP_004406991.1\|5724258_5724699_-	peptidoglycan-binding protein LysM	NA	NA	NA	NA
WP_024640483.1\|5724848_5725730_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_024640482.1\|5725833_5726670_+	formate dehydrogenase accessory sulfurtransferase FdhD	NA	NA	NA	NA
WP_024640481.1\|5726666_5729003_+	FdhF/YdeP family oxidoreductase	NA	NA	NA	NA
WP_024640480.1\|5729212_5729653_+	hypothetical protein	NA	NA	NA	NA
WP_024640479.1\|5729786_5731721_-	RecQ family ATP-dependent DNA helicase	F2NZ48	Diadromus_pulchellus_ascovirus	4.9e-54	40.2
WP_024640478.1\|5731867_5732689_+	hypothetical protein	NA	NA	NA	NA
WP_024640476.1\|5733318_5735490_-\|protease	M48 family metalloprotease	NA	NA	NA	NA
WP_003401916.1\|5736190_5736940_+	hypothetical protein	NA	NA	NA	NA
WP_003318241.1\|5737009_5737543_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_003343625.1\|5737557_5739060_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_003318239.1\|5739087_5739570_+\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_003343627.1\|5739569_5741402_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_024640475.1\|5741365_5742436_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP045801

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP045799

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection