CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP047266	Pseudomonas asturiensis strain CC1524 plasmid pCC1524, complete sequence	2 crisprs	NA	0	2	0	0
NZ_CP047265	Pseudomonas asturiensis strain CC1524 chromosome, complete genome	1 crisprs	DEDDh,DinG,csa3,cas3,RT	0	0	5	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP047266_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP047266_1

47194-47332

Orphan

Consensus_repeat	Method
GCCATAGCCAGAATTTGTAGTCG	CRISPRCasFinder

3 spacers

The CRISPR arrays of NZ_CP047266_1

>merge|NZ_CP047266|1|47194-47332|CRISPRCasFinder
TGCGTAGCCGGAATTTGTAGTCGATAGCCACTCTTTTGCCATAGCCAGAATTTGTAGTCGATAGCCATCCTATGGCCATAGCCGGAATTTGTAGTCGTTGCACGTCGCGCGCAGGGCCATAGCCGGAATTTGTAGTCGT

>NZ_CP047266|1|1|47194-47332|CRISPRCasFinder
TGCGTAGCCGGAATTTGTAGTCG	ATAGCCACTCTTTT
GCCATAGCCAGAATTTGTAGTCG	ATAGCCATCCTATG
GCCATAGCCGGAATTTGTAGTCG	TTGCACGTCGCGCGCAGG
GCCATAGCCGGAATTTGTAGTCGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP047266.1\|WP_024685715.1\|58975_60307_+\|HlyD-family-type-I-secretion-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|130902
NZ_CP047266.1\|WP_032622945.1\|26915_28343_-\|TolC-family-outer-membrane-protein	unknown	unknown	gnl\|CDD\|273829
NZ_CP047266.1\|WP_024689199.1\|34259_35744_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|275016
NZ_CP047266.1\|WP_159372228.1\|36726_44649_-\|DUF4214-domain-containing-protein	unknown	unknown	gnl\|CDD\|372834
NZ_CP047266.1\|WP_024685716.1\|60303_61632_+\|TolC-family-outer-membrane-protein	unknown	unknown	gnl\|CDD\|273829
NZ_CP047266.1\|WP_024684974.1\|51854_52109_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047266.1\|WP_024684975.1\|50477_51686_-\|site-specific-integrase	unknown	unknown	gnl\|CDD\|271182
NZ_CP047266.1\|WP_024684973.1\|52356_54237_-\|methyl-accepting-chemotaxis-protein	unknown	unknown	gnl\|CDD\|223910
NZ_CP047266.1\|WP_024685714.1\|57246_58968_+\|type-I-secretion-system-permease/ATPase	unknown	unknown	gnl\|CDD\|226969
NZ_CP047266.1\|WP_024689194.1\|28339_29653_-\|HlyD-family-type-I-secretion-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|130902
NZ_CP047266.1\|WP_159372229.1\|54605_56528_+\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|223910
NZ_CP047266.1\|WP_024689198.1\|33405_34263_+\|polyprenol-monophosphomannose-synthase	unknown	unknown	gnl\|CDD\|133062
NZ_CP047266.1\|WP_050586037.1\|31692_32850_+\|glycosyltransferase	unknown	unknown	gnl\|CDD\|340826
NZ_CP047266.1\|WP_024689200.1\|35837_36578_-\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|379276
NZ_CP047266.1\|WP_024684978.1\|48275_48908_+\|ParA-family-protein	unknown	unknown	gnl\|CDD\|349760
NZ_CP047266.1\|WP_024689195.1\|29675_31415_-\|type-I-secretion-system-permease/ATPase	unknown	unknown	gnl\|CDD\|226969
NZ_CP047266.1\|WP_024684979.1\|46349_47117_-\|replication-initiation-protein	unknown	unknown	gnl\|CDD\|376444
NZ_CP047266.1\|WP_032610791.1\|48907_49216_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047266.1\|WP_080266158.1\|32892_33390_+\|GtrA-family-protein	unknown	unknown	gnl\|CDD\|377229
NZ_CP047266.1\|WP_024684976.1\|49471_50503_+\|replication-terminus-site-binding-protein	unknown	unknown	gnl\|CDD\|368456

Protein	Function_ID	Function_description	E-value
NZ_CP047266.1\|WP_032622945.1\|26915_28343_-\|TolC-family-outer-membrane-protein	gnl\|CDD\|273829	TIGR01844, Proteases_secretion_protein_PrtF, type I secretion outer membrane protein, TolC family. Members of this model are outer membrane proteins from the TolC subfamily within the RND (Resistance-Nodulation-cell Division) efflux systems. These proteins, unlike the NodT subfamily, appear not to be lipoproteins. All are believed to participate in type I protein secretion, an ABC transporter system for protein secretion without cleavage of a signal sequence, although they may, like TolC, participate also in the efflux of smaller molecules as well. This family includes the well-documented examples TolC (E. coli), PrtF (Erwinia), and AprF (Pseudomonas aeruginosa). [Protein fate, Protein and peptide secretion and trafficking, Transport and binding proteins, Porins].	7.30985e-60
NZ_CP047266.1\|WP_024689199.1\|34259_35744_+\|hypothetical-protein	gnl\|CDD\|275016	TIGR04154, archaeo_STT3, oligosaccharyl transferase, archaeosortase A system-associated. Members of this protein family occur, one to three members per genome, in the same species of Euryarchaeota as contain the predicted protein-sorting enzyme archaeosortase (TIGR04125) and its cognate protein-sorting signal PGF-CTERM (TIGR04126).	4.67969e-05
NZ_CP047266.1\|WP_159372228.1\|36726_44649_-\|DUF4214-domain-containing-protein	gnl\|CDD\|372834	pfam13946, DUF4214, Domain of unknown function (DUF4214). This domain is found on a variety of different proteins including transferases, and allergen V5/Tpx-1 related proteins.	9.68914e-12
NZ_CP047266.1\|WP_024685716.1\|60303_61632_+\|TolC-family-outer-membrane-protein	gnl\|CDD\|273829	TIGR01844, Proteases_secretion_protein_PrtF, type I secretion outer membrane protein, TolC family. Members of this model are outer membrane proteins from the TolC subfamily within the RND (Resistance-Nodulation-cell Division) efflux systems. These proteins, unlike the NodT subfamily, appear not to be lipoproteins. All are believed to participate in type I protein secretion, an ABC transporter system for protein secretion without cleavage of a signal sequence, although they may, like TolC, participate also in the efflux of smaller molecules as well. This family includes the well-documented examples TolC (E. coli), PrtF (Erwinia), and AprF (Pseudomonas aeruginosa). [Protein fate, Protein and peptide secretion and trafficking, Transport and binding proteins, Porins].	4.73377e-63
NZ_CP047266.1\|WP_024684975.1\|50477_51686_-\|site-specific-integrase	gnl\|CDD\|271182	cd00801, INT_P4_C, Bacteriophage P4 integrase, C-terminal catalytic domain. P4-like integrases are found in temperate bacteriophages, integrative plasmids, pathogenicity and symbiosis islands, and other mobile genetic elements. The P4 integrase mediates integrative and excisive site-specific recombination between two sites, called attachment sites, located on the phage genome and the bacterial chromosome. The phage attachment site is often found adjacent to the integrase gene, while the host attachment sites are typically situated near tRNA genes. This family belongs to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The catalytic domain contains six conserved active site residues. Their overall reaction mechanism involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA.	2.23026e-50
NZ_CP047266.1\|WP_024684973.1\|52356_54237_-\|methyl-accepting-chemotaxis-protein	gnl\|CDD\|223910	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms].	3.06204e-77
NZ_CP047266.1\|WP_024685714.1\|57246_58968_+\|type-I-secretion-system-permease/ATPase	gnl\|CDD\|226969	COG4618, ArpD, ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only].	0
NZ_CP047266.1\|WP_024689194.1\|28339_29653_-\|HlyD-family-type-I-secretion-periplasmic-adaptor-subunit	gnl\|CDD\|130902	TIGR01843, Hemolysin_secretion_protein_D_plasmid, type I secretion membrane fusion protein, HlyD family. Type I secretion is an ABC transport process that exports proteins, without cleavage of any signal sequence, from the cytosol to extracellular medium across both inner and outer membranes. The secretion signal is found in the C-terminus of the transported protein. This model represents the adaptor protein between the ATP-binding cassette (ABC) protein of the inner membrane and the outer membrane protein, and is called the membrane fusion protein. This model selects a subfamily closely related to HlyD; it is defined narrowly and excludes, for example, colicin V secretion protein CvaA and multidrug efflux proteins. [Protein fate, Protein and peptide secretion and trafficking].	4.66933e-106
NZ_CP047266.1\|WP_159372229.1\|54605_56528_+\|HAMP-domain-containing-protein	gnl\|CDD\|223910	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms].	3.99614e-76
NZ_CP047266.1\|WP_024689198.1\|33405_34263_+\|polyprenol-monophosphomannose-synthase	gnl\|CDD\|133062	cd06442, DPM1_like, DPM1_like represents putative enzymes similar to eukaryotic DPM1. Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the existence of adapter molecules for membrane anchoring. This family also includes bacteria and archaea DPM1_like enzymes. However, the enzyme structure and mechanism of function are not well understood. This protein family belongs to Glycosyltransferase 2 superfamily.	9.91238e-84
NZ_CP047266.1\|WP_050586037.1\|31692_32850_+\|glycosyltransferase	gnl\|CDD\|340826	cd03795, GT4_WfcD-like, Escherichia coli alpha-1,3-mannosyltransferase WfcD and similar proteins. This family is most closely related to the GT4 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria and eukaryotes.	1.39385e-170
NZ_CP047266.1\|WP_024689200.1\|35837_36578_-\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|379276	pfam13578, Methyltransf_24, Methyltransferase domain. This family appears to be a methyltransferase domain.	6.02028e-10
NZ_CP047266.1\|WP_024684978.1\|48275_48908_+\|ParA-family-protein	gnl\|CDD\|349760	cd02042, ParAB_family, partition proteins ParAB family. ParA and ParB of Caulobacter crescentus belong to a conserved family of bacterial proteins implicated in chromosome segregation. ParB binds to DNA sequences adjacent to the origin of replication and localizes to opposite cell poles shortly following the initiation of DNA replication. ParB regulates the ParA ATPase activity by promoting nucleotide exchange in a fashion reminiscent of the exchange factors of eukaryotic G proteins. ADP-bound ParA binds single-stranded DNA, whereas the ATP-bound form dissociates ParB from its DNA binding sites. Increasing the fraction of ParA-ADP in the cell inhibits cell division, suggesting that this simple nucleotide switch may regulate cytokinesis. ParA shares sequence similarity to a conserved and widespread family of ATPases which includes the repA protein of the repABC operon in Rhizobium etli symbiotic plasmid. This operon is involved in the plasmid replication and partition.	7.34541e-37
NZ_CP047266.1\|WP_024689195.1\|29675_31415_-\|type-I-secretion-system-permease/ATPase	gnl\|CDD\|226969	COG4618, ArpD, ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only].	0
NZ_CP047266.1\|WP_024684979.1\|46349_47117_-\|replication-initiation-protein	gnl\|CDD\|376444	pfam01051, Rep_3, Initiator Replication protein. This protein is an initiator of plasmid replication. RepB possesses nicking-closing (topoisomerase I) like activity. It is also able to perform a strand transfer reaction on ssDNA that contains its target. This family also includes RepA which is an E.coli protein involved in plasmid replication. The RepA protein binds to DNA repeats that flank the repA gene.	4.86102e-58
NZ_CP047266.1\|WP_024685715.1\|58975_60307_+\|HlyD-family-type-I-secretion-periplasmic-adaptor-subunit	gnl\|CDD\|130902	TIGR01843, Hemolysin_secretion_protein_D_plasmid, type I secretion membrane fusion protein, HlyD family. Type I secretion is an ABC transport process that exports proteins, without cleavage of any signal sequence, from the cytosol to extracellular medium across both inner and outer membranes. The secretion signal is found in the C-terminus of the transported protein. This model represents the adaptor protein between the ATP-binding cassette (ABC) protein of the inner membrane and the outer membrane protein, and is called the membrane fusion protein. This model selects a subfamily closely related to HlyD; it is defined narrowly and excludes, for example, colicin V secretion protein CvaA and multidrug efflux proteins. [Protein fate, Protein and peptide secretion and trafficking].	1.5769e-95
NZ_CP047266.1\|WP_080266158.1\|32892_33390_+\|GtrA-family-protein	gnl\|CDD\|377229	pfam04138, GtrA, GtrA-like protein. Members of this family are predicted to be integral membrane proteins with three or four transmembrane spans. They are involved in the synthesis of cell surface polysaccharides. The GtrA family are a subset of this family. GtrA is predicted to be an integral membrane protein with 4 transmembrane spans. It is involved is in O antigen modification by Shigella flexneri bacteriophage X (SfX), but does not determine the specificity of glucosylation. Its function remains unknown, but it may play a role in translocation of undecaprenyl phosphate linked glucose (UndP-Glc) across the cytoplasmic membrane. Another member of this family is a DTDP-glucose-4-keto-6-deoxy-D-glucose reductase, which catalyzes the conversion of dTDP-4-keto-6-deoxy-D-glucose to dTDP-D-fucose, which is involved in the biosynthesis of the serotype-specific polysaccharide antigen of Actinobacillus actinomycetemcomitans Y4 (serotype b). This family also includes the teichoic acid glycosylation protein, GtcA, which is a serotype-specific protein in some Listeria innocua and monocytogenes strains. Its exact function is not known, but it is essential for decoration of cell wall teichoic acids with glucose and galactose.	1.17729e-13
NZ_CP047266.1\|WP_024684976.1\|49471_50503_+\|replication-terminus-site-binding-protein	gnl\|CDD\|368456	pfam05472, Ter, DNA replicatioN-terminus site-binding protein (Ter protein). This family contains several bacterial Ter proteins. The Ter protein specifically binds to DNA replicatioN-terminus sites on the host and plasmid genome and then blocks progress of the DNA replication fork.	6.01832e-07

>NZ_CP047266.1|WP_024684979.1|46349_47117_-|replication-initiation-protein
MSSKEPSSLLVTKANDLISASYRLTLQEQRLLLAAIAQVDPRKPMPSKITVTAASFADIYGVPIRFAYTNLKEAADSLYERDIQTFDGKNRTRIRWVYKAAYAEGEGRVTLNFTVDVIPYLSMLNSKLTSYDLRRVANLNSMHSFRLFELMMQFKSTGVLIIEVEKLRTLLDLGDSYKRFNNLRQRVIAPSISEIMAKSGITITYETITEGKTVKSLIFRFQEAAQLRLSLGDGMEIIPADEEVVVDEFPIKTVS
>NZ_CP047266.1|WP_159372228.1|36726_44649_-|DUF4214-domain-containing-protein
MSTQSDIAELYTAFFNRAPDAEGLAYWVGELDAGTISLEQIANNWVEAQPEGQAKYPDSLSTDAFITAIYGNVLSRSADSAGMAYWQAQLDSGAISRDVFVAAIINGAKSNTSAQGQLDATLLSNKASVGIAFADKGLNDVNLAASVLTSVTANANTLTATLDLIKLVPSNAAGQTPAVLTALNNAVTNVANLIKNSPGELSDLATYLNTVAANVSSSTNLTTLFTSINTKVVAAQTNPAALDNPATQASDDVTTATPSTTPTGPTTPTIPTFTVTEGTNADAGKFTVGAQNGNVTLSSASGELTFKAVTGTEVKIAASAVTQGLVIGNTTLTTSSAVLDELSTIITNNIISLVPSTPVVITGTVSSNSKVALTDTSLTAAQLLRFDAEVSLARLDVSAVASVTGSASDLLTAYTAVSITGLGNETVTVTDTASLSLLASVDVRTTGLFTVTSVADNASALVADTTYINGAIPVTLTGTATVAQLTAIDAKTTGLLTFTSITDTASNLITDTTYVTNIANAVDLTVSNSASLAQLATIATKTTGTLTVTSVADTAANLLVDTTYVNGAVAVTVSDSASLADLATIDAKTTGALTVTSVTDTAADLLVDTTYVNGAVAVTVTDSASLADLATIDAKTTGTVTVTSVTDTASALAADTLYINGAIPVSVTGAASIAQLTAIDAKTTGLVTFASVTDTAANLIADTTYVNGSVPVTVSGSADLAQLALIDTKTNGLVTVGSITDTAANLIADTTYVNGSVPVTVSGSADLAQLALIDTKTNGLVTVGSITDTAANLIADTTYVNGSVPVAVNGATDLAQLALIDAKTTGLVTAASITDTAANLIADTTYVNGAVAVTVSDSASLADLATIDAKTTGTVTATSVTDTASALVADSLYINGTIPVSVTGAASIAQLTAIDAKTAGLVTVGSITDTATNLIADSTYVIGAVPVTVSGSADLAQLALIDTKTNGLVTVGSITDTAANLIADTTYVNGSVPVAVSGATDLAQLALIDAKTTGLVTAASITDTAANLIADSAYVNGAVAVTVSDSASLADLATIDAKTTGTVTATSVTDTASALAADSTYITGAIPVSVTGAASIAQLTAIDAKTTGTLAIASINDTAANLIADTTYVNGSVPVTVSGAADLTQLAAIDAKTNGLVTVGSITDTAANLIADTTYVNGSVPVTVSGTANLADLATIDGRTNGTLTVTSVTDAASALAADTLYINGAIPVSVTGAATIAQLTAIDAKTTGLLTVASINDTVAALSADTLYIAGTVPVTVNDTASIAQLAAIDAKTTGTVIVTSVTDTASALAADSLYITGAIPVSVTGAASIAQLTAIDAKTTGTLAVASITDTVVNLVNDSTYITGTVPVTVSGVANLTQLAAIDAKTTGVLTVTSIEDSVSALFNDALYINGSVSVNVLGTADLTQLAAIDAKTTGTLTATAIADTAAALISDTTYVNGSIPVTITTAASLSQLASIDAKTAGTLTATSIADTAVALAADTTYIKNAIPVSVTDTATIAQLGSIDGKTTGALAVSSITDTATNLINDSTYVIGSVPVTVSGSASIAQLSAIDGKTSGLLSVTSITDSSANLIADTTYVNGSVPVTVSGTANLADLATIDGRTNGTLTVTSVTDTASALAADTLYINGAIPVSVTGAATIAQLTAIDAKTTGLLTVASINDTVAALSADTLYIAGTVPVTVNDAASIAQLAAIDAKTTGTVTVTSVTDTASALAADSTYINGAIPVSVTGAASIAQLTAIDAKTTGALAIASINDTAANLIADSLYVAGSVPVTVSGSASIAQLSAIDGKTSGLLSVTSITDSSANLIADTTYVNGSVPVTVSGTANLADLATIDGRTTGTVTVTSVTDTASALAADTLYINGAIPVTVTGAATIAQLTAIDGKTTGLLTVASINDTVAALSADTLYIAGTVPVTVNDAASIAQLAAIDAKTTGTVTVTSVTDTASALAADSTYITGAIPVSVTGAASIAQLTAIDGKTAGALNVASINDTAANLIADSTYVIGAVPVTVSGAASIAQLTAIAAKTTGALAIESINDTAANLMADSTYLIGAVPVTVSGTVSLSDLTDIDAKTTGKVTVIELSDTAANLVTSGVASVYIGEGSNVTITDAVTIAQLQTIDAANGDGTLTYTTITDTNANLTAIGASAYYTGIHANTNVVVTGAVTVAQLTSLDTANGTGTVTYTTDLNDTALALATDAATNAGAGTFTAGRAVTVSDNASIAQLATIDAAATTVTYAGIKDSAANLITNTGAYVLASTVVTVDGSATLAQLKSIDNVVTPALVYTSIADTAANLSANTDGYVTGSVAVKVTDTVSLAATTLTSIDALTTTQVDATTVTGLTGNFAAVDSVLKATGIQLSGSEKVNLTDTAASLNGKTLALTSTATTDELHVGLTSTSIDLSKITGFEDIFLAGSGRFTQTITVGDGDGVTVHAATLSNVIMGTGQQTFDSSAGNDTVLLKSGSTFSFAASAALNGNDTLNGFITGASNSTLNFNSFLGNSYSLGTEIVNSGSNFGGAAGSATLVDGLSVAQNGGFGLQTANTISVADFTGGYLSAVNGKEVLVTIDNTAHKANVYFVDSSLGGSTTAVDSASDIVQVATITLTGNVTTINDLHTTGILVV
>NZ_CP047266.1|WP_024689200.1|35837_36578_-|class-I-SAM-dependent-methyltransferase
MIVNGDSFNIINPELFKHSLEGLRQSVATPDSFYSADNVICWNRNFSFMTDEPFMAAMRKNATSNIEMSIIWRTYILCHFAKMARRLPGDFVEVGAYKGNTANVIADRVDLASTGKQYYLYDAFEHDEGDVHHAMPNHGPQLHNTVKERFAAYPFVQVIKGYVPDSFEQGFPEQIAFAHIDLNQAPAEVEALKRIVPRMVPGSVLILDDYGWWVYRAQKEAEDPLLAEFGLEVLELPTGQGLVFKL
>NZ_CP047266.1|WP_024689199.1|34259_35744_+|hypothetical-protein
MKTGVPADRSRSLLPGIALLLLCGLIAGIAFPMTVTLSGMQDGDGMLTALISTQNLTWYFWGQDRLLNVLPALTHPFTNVETNLRLQVMMRAMLAYLAPLGVLVFLTRELRLLVIAVAIANVVVVTCLAPYALFNFYVQHNTAGTSLVMLAATYALTYSRLPKPVMGVLVVLTLCVAYAANFALLTYALPMIVLIGLLKREERKRHALFLAANFVAILVARLHSSYFGEPSTSYGMQISWDALVAAGHSIHTFMHLFTLATFAVVAGLCYPYAREKRPWEIAAAVSIGLGLVVLLANTYWVQKNGYDIRYFITAQILITSVIGYLIAQALLSLNLRYGLVVALCVAALANCVAMGLGGYNGYYKELVSPTWRAQSAAVADVAVAQNVRVIAGGFWDVWAAVYQTKREQRSRPKSERMDVYGATFRGEVLREQFLASVLGKGEQNALCFYTDVNQCLLEINARFHLPPDYTLTLKKSEAVQILSLPMLKLVFEVN
>NZ_CP047266.1|WP_024689198.1|33405_34263_+|polyprenol-monophosphomannose-synthase
MKTLVFFATYNEAGNVQSMIDRIAESTPHADILVVDDNSKDGTLDILESLARPNLKVVVRPGKLGLGTAHLLAWKYAIHHGYDILVTMDGDHSHDPADIPHLINRLNDNTDLVIGSRYAKGGQCDYTGYRLRVSQAANMASRLLLGIKLSEFTTSFRAFRVNRLNAIDFDALVVGGYSFFLTVIVQAHRHGLRVAEHPIHFHERNAGVSKIPPLEIFRGMANLVRLACVTHLTRVSDAFDNSPLDCEQCSGDSSLMRIRSRTAGKHAKDEICLHCGDAKQGITAQ
>NZ_CP047266.1|WP_080266158.1|32892_33390_+|GtrA-family-protein
MPWPYRDITVLPRLIQQLTDLISFIIRGLLPKSLISFLIVGSLGVVVHMTVLKTVMLLATDNFRYANACAMIVAATFNYLLNNKATYRDTSLSGKRIIAGYAIYLAITSAGLALSLLISGEVYDRIGMPMASALSGIVVGSLWNYFMSYNFVWKLLSPKSSPANT
>NZ_CP047266.1|WP_050586037.1|31692_32850_+|glycosyltransferase
MRVLHFFKTYYPDTTGGIEQVIFQLCQGTRDLGIDNQVLTLSPHPHPARLQVADHSVVRVKEQLNLASTGFSLQAFSQFKAMAREADLVHFHFPWPFMDLVHFASLHDRPTVLSYHSDIIKQRSLLKLYTPLMNRFLKSMDRILVASPNYLRSSETLQPFADKTVVIPYGLDAAAYPQVTEQQLNDWRQRVPEKFFLFVGVLRYYKGLQSLLSALEGTDYPLVIIGSGPEEQALKAQAERLQLRHVLFLGRLDEVDKACLLQLSYALAFPSHLRSEAFGISLLEAAMYGKPMISCEIGTGTTYVNIHEETGLAVPPEHPDALRAALRRLWDNPQEASRFGANALKRFNTQFTAQRMCEKTVAVYRELVKGAVPSSTAGYSPSEEA
>NZ_CP047266.1|WP_024689195.1|29675_31415_-|type-I-secretion-system-permease/ATPase
MRNAHENSLQAALKACKSSFISVGVFSLFVNALMLVPTFYMLQVYGRVVTSGSLTTLAMLTIIMTILVITMGSLEWIRSRIMVRVSTKLDVLLSRDVYRASFKRALESGGMDASAQPLNDLTGLRQFMTGNGLFAFFDAPWLPIYVAVMFMFHPWYGWVAIASAIILLILAYLNERGTGKALGEANKENIAATLQTTKNLRNAEVIESMGMLSTLIQRWSRRQKKVLALQSQASDKGGVISAISKTFRMLIQSLILGLGAYLAVNHEISPGLVIAGSVLLGRALAPIDMIIGSWKGFIGARSQYDRLNNIMDKLKSEPERMSLPAPQGNVLVDNLIVGAPGSKNPIIRGISFGVPAGSVVGIIGPSASGKSTLARALMGVWAPQHGTVRLDGADISSWDKEELGPYIGYLPQDIELFEGSIGENIARFADVDAEKVVAAAQISGVHEMILHLPDGYDTVIGSDGVNLSGGQRQRIGLARAVYGNPRLILLDEPNSNLDEVGERALASAILELKKSGATIFVITHRTTILAVLDRLLVMAAGGVSMYGPRDQVMEELNKQQAAAQQKAAQVGTGANPVRA
>NZ_CP047266.1|WP_024689194.1|28339_29653_-|HlyD-family-type-I-secretion-periplasmic-adaptor-subunit
MLTKNVDNFADLPTSDTKTRRLGFTILIVVFGIFGTWAAVAPIDGAVYAPGVVTVQTYRKTVQHLEGGIVKDVLAHDGDMVKKGDPLIVLDDAQLRAEYDMNHNQLIAARAMEARLEAERDGKAQIDFGTMTEADTPRGIEARLGETQVFNARRGARLGQIAVLQERIGQLNQQIKGTEDMIGTKTNLQKSYTNEITELTDLLAKGFVDKQRMLEQQRKLDMLKSEVADHRSTITKTRLQINETQLQILQINKDFDSDVAKQLAEVQTKAYDLQERTAALADRLTRIVIRAPDDGMVIGMTVHTIGGVVRQATPLLDIVPSVSDLVVEAQVPPQDINRVNVGKTADIRFSAFNSATTPVIEGVVTSVSADRLTNEKTGMPYYLARVSVTPEGAQKLGDRKLLAGMPADVLVKTGERTMLQYLLQPARNAISQSMIEE
>NZ_CP047266.1|WP_032622945.1|26915_28343_-|TolC-family-outer-membrane-protein
MIVRLLPCLLVGMLAFQAHAAEPKTAEPKTAEPSRPKPAPKGISAVEYSADLMQLYRESRLEDPRVLASYSRAQSSKEQQREALGGLLPQITANAGANRIKQVNETTNQIYNSENYSVTLSQHLYNKAAWENYQRYKSLAKQSASESEEALAEATVDLAQRYFAALAADDELELVQAERRATQKNLDRVNALYDKQLAMITDKLDIQARVDSLAAQEVDARNQVRVTRAALSEIVGRPVKEKLSRVRNDVELQVSDESLDSWVQLAVNSNPQIHAGESAVEAAEAALRGGKGAHYPTLSLNLSAQNTNEGYNNALAPKTDSYVAGIGLQVPIYSGGSASARVRGLYQDQTTAELQMEATRRQVVKETTNAYLTADSSVEKIRANRNALASAEQSSIASQAAFSYGVVNAVDVLTATQNEFKARRDLLKTQYDFITNLFILNRWAGKLSEESVESVNVWLSNNSKTDSVPDRNSKQ
>NZ_CP047266.1|WP_024684978.1|48275_48908_+|ParA-family-protein
MTIFACVNTKGGVGKTTTAVHLATLLAIRGKTLLIDGDPQASAASWAAWRRDNPEYSPSPTTVCLQGKAINSEGRQLAGAYDHVVVDAGGRDSVGLRSALLLAEVVIVPVGASSFDAAAMTDLLTVVDLARDYNPDLDVRMLLSRVDTRTKDTGEMLTFLEEQSFSVFKTKICERVAFRRCISEGAIVHELKRDHAAIQEMNAFVAEVLG
>NZ_CP047266.1|WP_032610791.1|48907_49216_+|hypothetical-protein
MKSKPDIKSFNKDPNDFLEGGEADKALTKSRAITDKTIAEENPAQAMEAFKPEPTVQKLFRLRWDIANALKLGAAQESAKTGKRVTETDIIQQLLKKHYGIK
>NZ_CP047266.1|WP_024684976.1|49471_50503_+|replication-terminus-site-binding-protein
MYVDITSIHARLVSQVNAFNHIWPQWVVSGKVWQLPLLAQQKALDLIEVQPLEGEAAIHATIRAMTQFERLPGQAPGTVMRLPGYFALSQSVLPWIKEINQLKDELMAAIEQTRLELNLATTARSKILRQALGAQFSMKQLARHTQVFDICPRLIVFTWAGHTTGGERVAVGKVRELLGKAAEQQSSKDNVSIEQTLAGAELRRIVNLSDQASLIKYKKVAPHPRAMVYFSANSRYDAMIHSNLPMFVLAGEEPSSVHELRNFDRNTRQAERPDKKSRIEVIPRMNLYLNPDDLVGQRKPSVMVSKPSSVASTYSDKAQLPGQSVDVTVDHSQLDLNLRTDEA
>NZ_CP047266.1|WP_024684975.1|50477_51686_-|site-specific-integrase
MSKLTQAFVNTLVEPGSYHDERGLILRVSARGTKKWVLRYQLNNRRHDLGLGAFPEVSLKAARLAVDTHRLSLAQGIDPLSQRTVPDDETTVQTTQVVTFRFEAERYIKTHRQSWKNLRHAQQWSHSLRDHVYPLIGDLPVDQVETEQVLDVLMPIWNQIPETAFRLRNRIELVLDAARARKLREGENPARWRGHLDKLLPRQTHAKTPFSAMPADQLGPFLRRLDSLASTAARACELLIYTACRNAEVCDARWTEFDLNAGIWNIDAARMKAGKPHRVPLSRGALQVLEQQQGKHPVWVFPNARHSASLPGNALRRVMQELQAGAFVPHGFRSTFRTWAAENTLFPRDVCEMALAHSLEDKVEAAYNRGDLLGKRRQLMDAWAAFIESGAALEFTPHPSEG
>NZ_CP047266.1|WP_024684974.1|51854_52109_+|hypothetical-protein
MRDERGGLPDGTWCSRRGFIQPWVVEKPEPVLIRLFNKEQVILFFPTNVAAQVLMCFEFQSKANVWLGSYNECWYHVQTHDLAI
>NZ_CP047266.1|WP_024684973.1|52356_54237_-|methyl-accepting-chemotaxis-protein
MSLKFRHKILLAASGVVVLAFALFTLYNDYLQRTTIRQNLESSVGQAGQLTASSVQNWLSGRILVLENLTQDVAFQGVGSDLSGLVSQSSLVSTFQFTYVGDSKGTFTQRPDVQMPAGYDPRQRPWYKSTVDAGKTILSAPYQASVGGLVVTIASPVKSGGQVTGVVGGDLSLDTLVKIINSVEFGGIGYAFLVSGDGQVIVSPEKDQVMKNLKDIYPGQTLSLDARLREVTLNGQQRILSFTPITGLPSADWYIGLSIDKDKAYAPLSQFRSSAIVAGIIAVVVIALLLSLLIRALMKPLTDMGRAMQDIAQGEGDLTRRLTIQGRDEFADLGSSFNQFVERVHASIVEVSSATLQVHDLSQRVVHSSNSSIVGFDEQSARTNSVAAAINELGAATQEIARNASDASTQASEARTQAESGQVVVEQTIQSMNTLSTKISDSCVQIEQLNASTGNIGQILDVIKGISQQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAHRTQVSADEIHNMIGELQSGSQSAVVNMNESQASSLGSVEVANQAGSRLRDVTRRIGEIDGMNQSVAAATEEQTAVVETLNVDINQINALNQQGVANLNETLKDCAALSQQAGRLKQLVASFKI
>NZ_CP047266.1|WP_159372229.1|54605_56528_+|HAMP-domain-containing-protein
MNSWFANISVNMKLALGFGLVLVFTAILALTGWTSMSGLIARSNWMSDITSLNAQLTKLRVTRLQYMVADGDEKVAETVQVSLDGFKAYQEKLLTSFKSPENVKMLNQLSVVIADYQKSLNNMRSGYKASIALRKELSVNATKATEMLDRILADVSKLDATDPNRFEYYQLIVRAKEDLMQTRYEVRGYLTDITPENEQSAARKLDDALKNLQPLNATFGSTQADALKQLETSLQTYSTTLQGFKTSSGDIAQARKEMTVQGQDIVKLSEAMYQLQLDRRDQESAQARNMQIGCTLLAMILGIIAAVIITRQITRPLQETMAVVDRIASGDLSQTMVVTRRDELGVLQQGIQRMGTTLRELIGGIRDSVVQIASAAEELSAVTEQTSAGVNSQKVETDQVATAMHEMSATVAEVARNAEQASEAASTADKEARAGDKVVSEAIGQIERLAAEVVRSSDAMTLLEQESDKIGKVMDVIKAVAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRGLAQRTQQSTEEIENLVAALQNGTRQVSSIMLSSRELTVSSVQLSRKAGTSLNSITQTVSNIQAMNQQIAAAAEEQSAVAEEISRSIVNVRDVSEQTASASEETAASSVELARLGGQLQTMVSHFKI
>NZ_CP047266.1|WP_024685714.1|57246_58968_+|type-I-secretion-system-permease/ATPase
MRLFLDPKRDIDAALLRYRRLFGVLALFSGVINLLMLVPSIYMMQVFDRVLTSRNETTLLMLSLILLGFFMLSCALEWVRGQVMIKMSAGLDAQLGERVFDAAFQRSLREHNSNPAQVLSDLNSIRQFVTGPGLIALFDAPWLPIYIIATFLFHPWLGVFTVVGSLILAGLGVWNELTTRKSMSEANRLSVSSASYVNSTLQNAEVIQALGMLTPLRRRWFNVQQRVITEQGEASDRSSRIAAMSRFVRMTWQSLALGLGAILVMENQISAGVMIAVSVLLGRAMAPAEALIGSWKQMGNTKSSYQRLNRLLNEFPKAAPPMPLPPPTGALSIDRLVVTPPGLQRPAINGVTITLAKGEVLAVIGPSASGKSTLARAMVGIWPASHGSVRLDNAEISQWSREALGPYLGYLPQDIELFDGTIAENIARFGDVDSTKVIEAAQLAGIHEMILHFTKGYDTLLGVGGLGLSGGQKQRIGLARALYGQPPLVVLDEPNSNLDEAGEAALVQAVRQLKTAGCTVVLVTHRPNILGVVDKLLFLRDGVQHLFGPRDQVLRTLVPTPVQKTAESSNQEA
>NZ_CP047266.1|WP_024685715.1|58975_60307_+|HlyD-family-type-I-secretion-periplasmic-adaptor-subunit
MQSSQHDMTPVPAPDADAAGIARIGIWCLILGLGGFFLWAGLAPLDRGVVGAGTVVVSGERKTVQSRTGGMIDRILVREGDQVQQGQVVVQLNIVQTQSQLDVALGQWLSARAVEERLMAERLDRDSIQWSAQLLEKASDPRARAAMELQGYLFATRRAELASRMKISEHEITSLTQQLAGYEEIKRNHAAQFQFQQQELKGLRELAREGYLPRNRLFEAESNAAQLGAQLASTLSDIGRTRQAINESKLKALQQGQIFRSEAESQLTQVSAQTSSLTDQIKAFDFEVHSASVVAPVAGQVMGLAVHTVGGIAPAGQRLMDIVPQGSSWVVKAQFPPMMADRLKPGLPVDLRFGSLQRVHTPVIVGQVTTVSADQLIDEHTNSPYFSVEVSVSPKDIIKLRDMGLDIKPGMQAEVLVKTGERTLANYLMQPVSERMAGAFKEE
>NZ_CP047266.1|WP_024685716.1|60303_61632_+|TolC-family-outer-membrane-protein
MTVRTPIALLSVFWSCWLLAADDQTLSLVALYDASRLNDATYKVTDYDYQASRQEVAIGRAGLLPQVSINSRYGHGGQFEKQSSANSQDDQFAADSVALSVSQPLFDKGRWASYEQAKARAKLGEAQHEGAGQGLFDRVVEAYFDVAQVENELKLTTQQKASIEGLAKQSKRLFEAGEGTITDLEEAQARLDTTRAQEIELQARRRAALRKLAGRSGTAVNNIPQMQEKSPSTPLLAPEEDLDYWMLKADEAGATLGVSRASIKVAEANLKLQKSGHYPTVALSGRLSRIDQSDINEQSQRQSTYYVGVVVDIPLYQGGGVSASSEKARAALESARTSYDAQFQQLTEDVEANYLGVVAGFEKIKALVTSVRSSQVALTSAEKGYQAGVRSTVEILDAQQRLYSAKRDLLDTKLAMLQSYVNLHTRTGQMTRTQLEKVQSLF

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Crispr_ID: NZ_CP047266_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP047266_2

47574-47682

Orphan

Consensus_repeat	Method
GCCATAGCCAGAATTTGTAGTCG	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP047266_2

>merge|NZ_CP047266|2|47574-47682|CRISPRCasFinder
ATAACAGCCGGAATCTGTAGTCGTCATAGCTGAAATCTGTAGTCGTCATAGCTGGAATTTGTAGTCGTATAGCTGAAATCTGTAGTCGTATAGCCGGAATTTGTAGTCG

>NZ_CP047266|2|2|47574-47682|CRISPRCasFinder
ATAACAGCCGGAATCTGTAGTCG	TCATAGCTGAAATCTGTAGTC
GTCATAGCTGGAATTTGTAGTCG	TATAGCTGAAATCTGTAGT
CGTATAGCCGGAATTTGTAGTCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP047266.1\|WP_024685715.1\|58975_60307_+\|HlyD-family-type-I-secretion-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|130902
NZ_CP047266.1\|WP_032622945.1\|26915_28343_-\|TolC-family-outer-membrane-protein	unknown	unknown	gnl\|CDD\|273829
NZ_CP047266.1\|WP_024689199.1\|34259_35744_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|275016
NZ_CP047266.1\|WP_159372228.1\|36726_44649_-\|DUF4214-domain-containing-protein	unknown	unknown	gnl\|CDD\|372834
NZ_CP047266.1\|WP_024685716.1\|60303_61632_+\|TolC-family-outer-membrane-protein	unknown	unknown	gnl\|CDD\|273829
NZ_CP047266.1\|WP_024684974.1\|51854_52109_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047266.1\|WP_024684975.1\|50477_51686_-\|site-specific-integrase	unknown	unknown	gnl\|CDD\|271182
NZ_CP047266.1\|WP_024684973.1\|52356_54237_-\|methyl-accepting-chemotaxis-protein	unknown	unknown	gnl\|CDD\|223910
NZ_CP047266.1\|WP_024685714.1\|57246_58968_+\|type-I-secretion-system-permease/ATPase	unknown	unknown	gnl\|CDD\|226969
NZ_CP047266.1\|WP_024689194.1\|28339_29653_-\|HlyD-family-type-I-secretion-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|130902
NZ_CP047266.1\|WP_159372229.1\|54605_56528_+\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|223910
NZ_CP047266.1\|WP_024689198.1\|33405_34263_+\|polyprenol-monophosphomannose-synthase	unknown	unknown	gnl\|CDD\|133062
NZ_CP047266.1\|WP_050586037.1\|31692_32850_+\|glycosyltransferase	unknown	unknown	gnl\|CDD\|340826
NZ_CP047266.1\|WP_024689200.1\|35837_36578_-\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|379276
NZ_CP047266.1\|WP_024684978.1\|48275_48908_+\|ParA-family-protein	unknown	unknown	gnl\|CDD\|349760
NZ_CP047266.1\|WP_024689195.1\|29675_31415_-\|type-I-secretion-system-permease/ATPase	unknown	unknown	gnl\|CDD\|226969
NZ_CP047266.1\|WP_024684979.1\|46349_47117_-\|replication-initiation-protein	unknown	unknown	gnl\|CDD\|376444
NZ_CP047266.1\|WP_032610791.1\|48907_49216_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047266.1\|WP_080266158.1\|32892_33390_+\|GtrA-family-protein	unknown	unknown	gnl\|CDD\|377229
NZ_CP047266.1\|WP_024684976.1\|49471_50503_+\|replication-terminus-site-binding-protein	unknown	unknown	gnl\|CDD\|368456

Protein	Function_ID	Function_description	E-value
NZ_CP047266.1\|WP_032622945.1\|26915_28343_-\|TolC-family-outer-membrane-protein	gnl\|CDD\|273829	TIGR01844, Proteases_secretion_protein_PrtF, type I secretion outer membrane protein, TolC family. Members of this model are outer membrane proteins from the TolC subfamily within the RND (Resistance-Nodulation-cell Division) efflux systems. These proteins, unlike the NodT subfamily, appear not to be lipoproteins. All are believed to participate in type I protein secretion, an ABC transporter system for protein secretion without cleavage of a signal sequence, although they may, like TolC, participate also in the efflux of smaller molecules as well. This family includes the well-documented examples TolC (E. coli), PrtF (Erwinia), and AprF (Pseudomonas aeruginosa). [Protein fate, Protein and peptide secretion and trafficking, Transport and binding proteins, Porins].	7.30985e-60
NZ_CP047266.1\|WP_024689199.1\|34259_35744_+\|hypothetical-protein	gnl\|CDD\|275016	TIGR04154, archaeo_STT3, oligosaccharyl transferase, archaeosortase A system-associated. Members of this protein family occur, one to three members per genome, in the same species of Euryarchaeota as contain the predicted protein-sorting enzyme archaeosortase (TIGR04125) and its cognate protein-sorting signal PGF-CTERM (TIGR04126).	4.67969e-05
NZ_CP047266.1\|WP_159372228.1\|36726_44649_-\|DUF4214-domain-containing-protein	gnl\|CDD\|372834	pfam13946, DUF4214, Domain of unknown function (DUF4214). This domain is found on a variety of different proteins including transferases, and allergen V5/Tpx-1 related proteins.	9.68914e-12
NZ_CP047266.1\|WP_024685716.1\|60303_61632_+\|TolC-family-outer-membrane-protein	gnl\|CDD\|273829	TIGR01844, Proteases_secretion_protein_PrtF, type I secretion outer membrane protein, TolC family. Members of this model are outer membrane proteins from the TolC subfamily within the RND (Resistance-Nodulation-cell Division) efflux systems. These proteins, unlike the NodT subfamily, appear not to be lipoproteins. All are believed to participate in type I protein secretion, an ABC transporter system for protein secretion without cleavage of a signal sequence, although they may, like TolC, participate also in the efflux of smaller molecules as well. This family includes the well-documented examples TolC (E. coli), PrtF (Erwinia), and AprF (Pseudomonas aeruginosa). [Protein fate, Protein and peptide secretion and trafficking, Transport and binding proteins, Porins].	4.73377e-63
NZ_CP047266.1\|WP_024684975.1\|50477_51686_-\|site-specific-integrase	gnl\|CDD\|271182	cd00801, INT_P4_C, Bacteriophage P4 integrase, C-terminal catalytic domain. P4-like integrases are found in temperate bacteriophages, integrative plasmids, pathogenicity and symbiosis islands, and other mobile genetic elements. The P4 integrase mediates integrative and excisive site-specific recombination between two sites, called attachment sites, located on the phage genome and the bacterial chromosome. The phage attachment site is often found adjacent to the integrase gene, while the host attachment sites are typically situated near tRNA genes. This family belongs to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The catalytic domain contains six conserved active site residues. Their overall reaction mechanism involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA.	2.23026e-50
NZ_CP047266.1\|WP_024684973.1\|52356_54237_-\|methyl-accepting-chemotaxis-protein	gnl\|CDD\|223910	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms].	3.06204e-77
NZ_CP047266.1\|WP_024685714.1\|57246_58968_+\|type-I-secretion-system-permease/ATPase	gnl\|CDD\|226969	COG4618, ArpD, ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only].	0
NZ_CP047266.1\|WP_024689194.1\|28339_29653_-\|HlyD-family-type-I-secretion-periplasmic-adaptor-subunit	gnl\|CDD\|130902	TIGR01843, Hemolysin_secretion_protein_D_plasmid, type I secretion membrane fusion protein, HlyD family. Type I secretion is an ABC transport process that exports proteins, without cleavage of any signal sequence, from the cytosol to extracellular medium across both inner and outer membranes. The secretion signal is found in the C-terminus of the transported protein. This model represents the adaptor protein between the ATP-binding cassette (ABC) protein of the inner membrane and the outer membrane protein, and is called the membrane fusion protein. This model selects a subfamily closely related to HlyD; it is defined narrowly and excludes, for example, colicin V secretion protein CvaA and multidrug efflux proteins. [Protein fate, Protein and peptide secretion and trafficking].	4.66933e-106
NZ_CP047266.1\|WP_159372229.1\|54605_56528_+\|HAMP-domain-containing-protein	gnl\|CDD\|223910	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms].	3.99614e-76
NZ_CP047266.1\|WP_024689198.1\|33405_34263_+\|polyprenol-monophosphomannose-synthase	gnl\|CDD\|133062	cd06442, DPM1_like, DPM1_like represents putative enzymes similar to eukaryotic DPM1. Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the existence of adapter molecules for membrane anchoring. This family also includes bacteria and archaea DPM1_like enzymes. However, the enzyme structure and mechanism of function are not well understood. This protein family belongs to Glycosyltransferase 2 superfamily.	9.91238e-84
NZ_CP047266.1\|WP_050586037.1\|31692_32850_+\|glycosyltransferase	gnl\|CDD\|340826	cd03795, GT4_WfcD-like, Escherichia coli alpha-1,3-mannosyltransferase WfcD and similar proteins. This family is most closely related to the GT4 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria and eukaryotes.	1.39385e-170
NZ_CP047266.1\|WP_024689200.1\|35837_36578_-\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|379276	pfam13578, Methyltransf_24, Methyltransferase domain. This family appears to be a methyltransferase domain.	6.02028e-10
NZ_CP047266.1\|WP_024684978.1\|48275_48908_+\|ParA-family-protein	gnl\|CDD\|349760	cd02042, ParAB_family, partition proteins ParAB family. ParA and ParB of Caulobacter crescentus belong to a conserved family of bacterial proteins implicated in chromosome segregation. ParB binds to DNA sequences adjacent to the origin of replication and localizes to opposite cell poles shortly following the initiation of DNA replication. ParB regulates the ParA ATPase activity by promoting nucleotide exchange in a fashion reminiscent of the exchange factors of eukaryotic G proteins. ADP-bound ParA binds single-stranded DNA, whereas the ATP-bound form dissociates ParB from its DNA binding sites. Increasing the fraction of ParA-ADP in the cell inhibits cell division, suggesting that this simple nucleotide switch may regulate cytokinesis. ParA shares sequence similarity to a conserved and widespread family of ATPases which includes the repA protein of the repABC operon in Rhizobium etli symbiotic plasmid. This operon is involved in the plasmid replication and partition.	7.34541e-37
NZ_CP047266.1\|WP_024689195.1\|29675_31415_-\|type-I-secretion-system-permease/ATPase	gnl\|CDD\|226969	COG4618, ArpD, ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only].	0
NZ_CP047266.1\|WP_024684979.1\|46349_47117_-\|replication-initiation-protein	gnl\|CDD\|376444	pfam01051, Rep_3, Initiator Replication protein. This protein is an initiator of plasmid replication. RepB possesses nicking-closing (topoisomerase I) like activity. It is also able to perform a strand transfer reaction on ssDNA that contains its target. This family also includes RepA which is an E.coli protein involved in plasmid replication. The RepA protein binds to DNA repeats that flank the repA gene.	4.86102e-58
NZ_CP047266.1\|WP_024685715.1\|58975_60307_+\|HlyD-family-type-I-secretion-periplasmic-adaptor-subunit	gnl\|CDD\|130902	TIGR01843, Hemolysin_secretion_protein_D_plasmid, type I secretion membrane fusion protein, HlyD family. Type I secretion is an ABC transport process that exports proteins, without cleavage of any signal sequence, from the cytosol to extracellular medium across both inner and outer membranes. The secretion signal is found in the C-terminus of the transported protein. This model represents the adaptor protein between the ATP-binding cassette (ABC) protein of the inner membrane and the outer membrane protein, and is called the membrane fusion protein. This model selects a subfamily closely related to HlyD; it is defined narrowly and excludes, for example, colicin V secretion protein CvaA and multidrug efflux proteins. [Protein fate, Protein and peptide secretion and trafficking].	1.5769e-95
NZ_CP047266.1\|WP_080266158.1\|32892_33390_+\|GtrA-family-protein	gnl\|CDD\|377229	pfam04138, GtrA, GtrA-like protein. Members of this family are predicted to be integral membrane proteins with three or four transmembrane spans. They are involved in the synthesis of cell surface polysaccharides. The GtrA family are a subset of this family. GtrA is predicted to be an integral membrane protein with 4 transmembrane spans. It is involved is in O antigen modification by Shigella flexneri bacteriophage X (SfX), but does not determine the specificity of glucosylation. Its function remains unknown, but it may play a role in translocation of undecaprenyl phosphate linked glucose (UndP-Glc) across the cytoplasmic membrane. Another member of this family is a DTDP-glucose-4-keto-6-deoxy-D-glucose reductase, which catalyzes the conversion of dTDP-4-keto-6-deoxy-D-glucose to dTDP-D-fucose, which is involved in the biosynthesis of the serotype-specific polysaccharide antigen of Actinobacillus actinomycetemcomitans Y4 (serotype b). This family also includes the teichoic acid glycosylation protein, GtcA, which is a serotype-specific protein in some Listeria innocua and monocytogenes strains. Its exact function is not known, but it is essential for decoration of cell wall teichoic acids with glucose and galactose.	1.17729e-13
NZ_CP047266.1\|WP_024684976.1\|49471_50503_+\|replication-terminus-site-binding-protein	gnl\|CDD\|368456	pfam05472, Ter, DNA replicatioN-terminus site-binding protein (Ter protein). This family contains several bacterial Ter proteins. The Ter protein specifically binds to DNA replicatioN-terminus sites on the host and plasmid genome and then blocks progress of the DNA replication fork.	6.01832e-07

>NZ_CP047266.1|WP_024684979.1|46349_47117_-|replication-initiation-protein
MSSKEPSSLLVTKANDLISASYRLTLQEQRLLLAAIAQVDPRKPMPSKITVTAASFADIYGVPIRFAYTNLKEAADSLYERDIQTFDGKNRTRIRWVYKAAYAEGEGRVTLNFTVDVIPYLSMLNSKLTSYDLRRVANLNSMHSFRLFELMMQFKSTGVLIIEVEKLRTLLDLGDSYKRFNNLRQRVIAPSISEIMAKSGITITYETITEGKTVKSLIFRFQEAAQLRLSLGDGMEIIPADEEVVVDEFPIKTVS
>NZ_CP047266.1|WP_159372228.1|36726_44649_-|DUF4214-domain-containing-protein
MSTQSDIAELYTAFFNRAPDAEGLAYWVGELDAGTISLEQIANNWVEAQPEGQAKYPDSLSTDAFITAIYGNVLSRSADSAGMAYWQAQLDSGAISRDVFVAAIINGAKSNTSAQGQLDATLLSNKASVGIAFADKGLNDVNLAASVLTSVTANANTLTATLDLIKLVPSNAAGQTPAVLTALNNAVTNVANLIKNSPGELSDLATYLNTVAANVSSSTNLTTLFTSINTKVVAAQTNPAALDNPATQASDDVTTATPSTTPTGPTTPTIPTFTVTEGTNADAGKFTVGAQNGNVTLSSASGELTFKAVTGTEVKIAASAVTQGLVIGNTTLTTSSAVLDELSTIITNNIISLVPSTPVVITGTVSSNSKVALTDTSLTAAQLLRFDAEVSLARLDVSAVASVTGSASDLLTAYTAVSITGLGNETVTVTDTASLSLLASVDVRTTGLFTVTSVADNASALVADTTYINGAIPVTLTGTATVAQLTAIDAKTTGLLTFTSITDTASNLITDTTYVTNIANAVDLTVSNSASLAQLATIATKTTGTLTVTSVADTAANLLVDTTYVNGAVAVTVSDSASLADLATIDAKTTGALTVTSVTDTAADLLVDTTYVNGAVAVTVTDSASLADLATIDAKTTGTVTVTSVTDTASALAADTLYINGAIPVSVTGAASIAQLTAIDAKTTGLVTFASVTDTAANLIADTTYVNGSVPVTVSGSADLAQLALIDTKTNGLVTVGSITDTAANLIADTTYVNGSVPVTVSGSADLAQLALIDTKTNGLVTVGSITDTAANLIADTTYVNGSVPVAVNGATDLAQLALIDAKTTGLVTAASITDTAANLIADTTYVNGAVAVTVSDSASLADLATIDAKTTGTVTATSVTDTASALVADSLYINGTIPVSVTGAASIAQLTAIDAKTAGLVTVGSITDTATNLIADSTYVIGAVPVTVSGSADLAQLALIDTKTNGLVTVGSITDTAANLIADTTYVNGSVPVAVSGATDLAQLALIDAKTTGLVTAASITDTAANLIADSAYVNGAVAVTVSDSASLADLATIDAKTTGTVTATSVTDTASALAADSTYITGAIPVSVTGAASIAQLTAIDAKTTGTLAIASINDTAANLIADTTYVNGSVPVTVSGAADLTQLAAIDAKTNGLVTVGSITDTAANLIADTTYVNGSVPVTVSGTANLADLATIDGRTNGTLTVTSVTDAASALAADTLYINGAIPVSVTGAATIAQLTAIDAKTTGLLTVASINDTVAALSADTLYIAGTVPVTVNDTASIAQLAAIDAKTTGTVIVTSVTDTASALAADSLYITGAIPVSVTGAASIAQLTAIDAKTTGTLAVASITDTVVNLVNDSTYITGTVPVTVSGVANLTQLAAIDAKTTGVLTVTSIEDSVSALFNDALYINGSVSVNVLGTADLTQLAAIDAKTTGTLTATAIADTAAALISDTTYVNGSIPVTITTAASLSQLASIDAKTAGTLTATSIADTAVALAADTTYIKNAIPVSVTDTATIAQLGSIDGKTTGALAVSSITDTATNLINDSTYVIGSVPVTVSGSASIAQLSAIDGKTSGLLSVTSITDSSANLIADTTYVNGSVPVTVSGTANLADLATIDGRTNGTLTVTSVTDTASALAADTLYINGAIPVSVTGAATIAQLTAIDAKTTGLLTVASINDTVAALSADTLYIAGTVPVTVNDAASIAQLAAIDAKTTGTVTVTSVTDTASALAADSTYINGAIPVSVTGAASIAQLTAIDAKTTGALAIASINDTAANLIADSLYVAGSVPVTVSGSASIAQLSAIDGKTSGLLSVTSITDSSANLIADTTYVNGSVPVTVSGTANLADLATIDGRTTGTVTVTSVTDTASALAADTLYINGAIPVTVTGAATIAQLTAIDGKTTGLLTVASINDTVAALSADTLYIAGTVPVTVNDAASIAQLAAIDAKTTGTVTVTSVTDTASALAADSTYITGAIPVSVTGAASIAQLTAIDGKTAGALNVASINDTAANLIADSTYVIGAVPVTVSGAASIAQLTAIAAKTTGALAIESINDTAANLMADSTYLIGAVPVTVSGTVSLSDLTDIDAKTTGKVTVIELSDTAANLVTSGVASVYIGEGSNVTITDAVTIAQLQTIDAANGDGTLTYTTITDTNANLTAIGASAYYTGIHANTNVVVTGAVTVAQLTSLDTANGTGTVTYTTDLNDTALALATDAATNAGAGTFTAGRAVTVSDNASIAQLATIDAAATTVTYAGIKDSAANLITNTGAYVLASTVVTVDGSATLAQLKSIDNVVTPALVYTSIADTAANLSANTDGYVTGSVAVKVTDTVSLAATTLTSIDALTTTQVDATTVTGLTGNFAAVDSVLKATGIQLSGSEKVNLTDTAASLNGKTLALTSTATTDELHVGLTSTSIDLSKITGFEDIFLAGSGRFTQTITVGDGDGVTVHAATLSNVIMGTGQQTFDSSAGNDTVLLKSGSTFSFAASAALNGNDTLNGFITGASNSTLNFNSFLGNSYSLGTEIVNSGSNFGGAAGSATLVDGLSVAQNGGFGLQTANTISVADFTGGYLSAVNGKEVLVTIDNTAHKANVYFVDSSLGGSTTAVDSASDIVQVATITLTGNVTTINDLHTTGILVV
>NZ_CP047266.1|WP_024689200.1|35837_36578_-|class-I-SAM-dependent-methyltransferase
MIVNGDSFNIINPELFKHSLEGLRQSVATPDSFYSADNVICWNRNFSFMTDEPFMAAMRKNATSNIEMSIIWRTYILCHFAKMARRLPGDFVEVGAYKGNTANVIADRVDLASTGKQYYLYDAFEHDEGDVHHAMPNHGPQLHNTVKERFAAYPFVQVIKGYVPDSFEQGFPEQIAFAHIDLNQAPAEVEALKRIVPRMVPGSVLILDDYGWWVYRAQKEAEDPLLAEFGLEVLELPTGQGLVFKL
>NZ_CP047266.1|WP_024689199.1|34259_35744_+|hypothetical-protein
MKTGVPADRSRSLLPGIALLLLCGLIAGIAFPMTVTLSGMQDGDGMLTALISTQNLTWYFWGQDRLLNVLPALTHPFTNVETNLRLQVMMRAMLAYLAPLGVLVFLTRELRLLVIAVAIANVVVVTCLAPYALFNFYVQHNTAGTSLVMLAATYALTYSRLPKPVMGVLVVLTLCVAYAANFALLTYALPMIVLIGLLKREERKRHALFLAANFVAILVARLHSSYFGEPSTSYGMQISWDALVAAGHSIHTFMHLFTLATFAVVAGLCYPYAREKRPWEIAAAVSIGLGLVVLLANTYWVQKNGYDIRYFITAQILITSVIGYLIAQALLSLNLRYGLVVALCVAALANCVAMGLGGYNGYYKELVSPTWRAQSAAVADVAVAQNVRVIAGGFWDVWAAVYQTKREQRSRPKSERMDVYGATFRGEVLREQFLASVLGKGEQNALCFYTDVNQCLLEINARFHLPPDYTLTLKKSEAVQILSLPMLKLVFEVN
>NZ_CP047266.1|WP_024689198.1|33405_34263_+|polyprenol-monophosphomannose-synthase
MKTLVFFATYNEAGNVQSMIDRIAESTPHADILVVDDNSKDGTLDILESLARPNLKVVVRPGKLGLGTAHLLAWKYAIHHGYDILVTMDGDHSHDPADIPHLINRLNDNTDLVIGSRYAKGGQCDYTGYRLRVSQAANMASRLLLGIKLSEFTTSFRAFRVNRLNAIDFDALVVGGYSFFLTVIVQAHRHGLRVAEHPIHFHERNAGVSKIPPLEIFRGMANLVRLACVTHLTRVSDAFDNSPLDCEQCSGDSSLMRIRSRTAGKHAKDEICLHCGDAKQGITAQ
>NZ_CP047266.1|WP_080266158.1|32892_33390_+|GtrA-family-protein
MPWPYRDITVLPRLIQQLTDLISFIIRGLLPKSLISFLIVGSLGVVVHMTVLKTVMLLATDNFRYANACAMIVAATFNYLLNNKATYRDTSLSGKRIIAGYAIYLAITSAGLALSLLISGEVYDRIGMPMASALSGIVVGSLWNYFMSYNFVWKLLSPKSSPANT
>NZ_CP047266.1|WP_050586037.1|31692_32850_+|glycosyltransferase
MRVLHFFKTYYPDTTGGIEQVIFQLCQGTRDLGIDNQVLTLSPHPHPARLQVADHSVVRVKEQLNLASTGFSLQAFSQFKAMAREADLVHFHFPWPFMDLVHFASLHDRPTVLSYHSDIIKQRSLLKLYTPLMNRFLKSMDRILVASPNYLRSSETLQPFADKTVVIPYGLDAAAYPQVTEQQLNDWRQRVPEKFFLFVGVLRYYKGLQSLLSALEGTDYPLVIIGSGPEEQALKAQAERLQLRHVLFLGRLDEVDKACLLQLSYALAFPSHLRSEAFGISLLEAAMYGKPMISCEIGTGTTYVNIHEETGLAVPPEHPDALRAALRRLWDNPQEASRFGANALKRFNTQFTAQRMCEKTVAVYRELVKGAVPSSTAGYSPSEEA
>NZ_CP047266.1|WP_024689195.1|29675_31415_-|type-I-secretion-system-permease/ATPase
MRNAHENSLQAALKACKSSFISVGVFSLFVNALMLVPTFYMLQVYGRVVTSGSLTTLAMLTIIMTILVITMGSLEWIRSRIMVRVSTKLDVLLSRDVYRASFKRALESGGMDASAQPLNDLTGLRQFMTGNGLFAFFDAPWLPIYVAVMFMFHPWYGWVAIASAIILLILAYLNERGTGKALGEANKENIAATLQTTKNLRNAEVIESMGMLSTLIQRWSRRQKKVLALQSQASDKGGVISAISKTFRMLIQSLILGLGAYLAVNHEISPGLVIAGSVLLGRALAPIDMIIGSWKGFIGARSQYDRLNNIMDKLKSEPERMSLPAPQGNVLVDNLIVGAPGSKNPIIRGISFGVPAGSVVGIIGPSASGKSTLARALMGVWAPQHGTVRLDGADISSWDKEELGPYIGYLPQDIELFEGSIGENIARFADVDAEKVVAAAQISGVHEMILHLPDGYDTVIGSDGVNLSGGQRQRIGLARAVYGNPRLILLDEPNSNLDEVGERALASAILELKKSGATIFVITHRTTILAVLDRLLVMAAGGVSMYGPRDQVMEELNKQQAAAQQKAAQVGTGANPVRA
>NZ_CP047266.1|WP_024689194.1|28339_29653_-|HlyD-family-type-I-secretion-periplasmic-adaptor-subunit
MLTKNVDNFADLPTSDTKTRRLGFTILIVVFGIFGTWAAVAPIDGAVYAPGVVTVQTYRKTVQHLEGGIVKDVLAHDGDMVKKGDPLIVLDDAQLRAEYDMNHNQLIAARAMEARLEAERDGKAQIDFGTMTEADTPRGIEARLGETQVFNARRGARLGQIAVLQERIGQLNQQIKGTEDMIGTKTNLQKSYTNEITELTDLLAKGFVDKQRMLEQQRKLDMLKSEVADHRSTITKTRLQINETQLQILQINKDFDSDVAKQLAEVQTKAYDLQERTAALADRLTRIVIRAPDDGMVIGMTVHTIGGVVRQATPLLDIVPSVSDLVVEAQVPPQDINRVNVGKTADIRFSAFNSATTPVIEGVVTSVSADRLTNEKTGMPYYLARVSVTPEGAQKLGDRKLLAGMPADVLVKTGERTMLQYLLQPARNAISQSMIEE
>NZ_CP047266.1|WP_032622945.1|26915_28343_-|TolC-family-outer-membrane-protein
MIVRLLPCLLVGMLAFQAHAAEPKTAEPKTAEPSRPKPAPKGISAVEYSADLMQLYRESRLEDPRVLASYSRAQSSKEQQREALGGLLPQITANAGANRIKQVNETTNQIYNSENYSVTLSQHLYNKAAWENYQRYKSLAKQSASESEEALAEATVDLAQRYFAALAADDELELVQAERRATQKNLDRVNALYDKQLAMITDKLDIQARVDSLAAQEVDARNQVRVTRAALSEIVGRPVKEKLSRVRNDVELQVSDESLDSWVQLAVNSNPQIHAGESAVEAAEAALRGGKGAHYPTLSLNLSAQNTNEGYNNALAPKTDSYVAGIGLQVPIYSGGSASARVRGLYQDQTTAELQMEATRRQVVKETTNAYLTADSSVEKIRANRNALASAEQSSIASQAAFSYGVVNAVDVLTATQNEFKARRDLLKTQYDFITNLFILNRWAGKLSEESVESVNVWLSNNSKTDSVPDRNSKQ
>NZ_CP047266.1|WP_024684978.1|48275_48908_+|ParA-family-protein
MTIFACVNTKGGVGKTTTAVHLATLLAIRGKTLLIDGDPQASAASWAAWRRDNPEYSPSPTTVCLQGKAINSEGRQLAGAYDHVVVDAGGRDSVGLRSALLLAEVVIVPVGASSFDAAAMTDLLTVVDLARDYNPDLDVRMLLSRVDTRTKDTGEMLTFLEEQSFSVFKTKICERVAFRRCISEGAIVHELKRDHAAIQEMNAFVAEVLG
>NZ_CP047266.1|WP_032610791.1|48907_49216_+|hypothetical-protein
MKSKPDIKSFNKDPNDFLEGGEADKALTKSRAITDKTIAEENPAQAMEAFKPEPTVQKLFRLRWDIANALKLGAAQESAKTGKRVTETDIIQQLLKKHYGIK
>NZ_CP047266.1|WP_024684976.1|49471_50503_+|replication-terminus-site-binding-protein
MYVDITSIHARLVSQVNAFNHIWPQWVVSGKVWQLPLLAQQKALDLIEVQPLEGEAAIHATIRAMTQFERLPGQAPGTVMRLPGYFALSQSVLPWIKEINQLKDELMAAIEQTRLELNLATTARSKILRQALGAQFSMKQLARHTQVFDICPRLIVFTWAGHTTGGERVAVGKVRELLGKAAEQQSSKDNVSIEQTLAGAELRRIVNLSDQASLIKYKKVAPHPRAMVYFSANSRYDAMIHSNLPMFVLAGEEPSSVHELRNFDRNTRQAERPDKKSRIEVIPRMNLYLNPDDLVGQRKPSVMVSKPSSVASTYSDKAQLPGQSVDVTVDHSQLDLNLRTDEA
>NZ_CP047266.1|WP_024684975.1|50477_51686_-|site-specific-integrase
MSKLTQAFVNTLVEPGSYHDERGLILRVSARGTKKWVLRYQLNNRRHDLGLGAFPEVSLKAARLAVDTHRLSLAQGIDPLSQRTVPDDETTVQTTQVVTFRFEAERYIKTHRQSWKNLRHAQQWSHSLRDHVYPLIGDLPVDQVETEQVLDVLMPIWNQIPETAFRLRNRIELVLDAARARKLREGENPARWRGHLDKLLPRQTHAKTPFSAMPADQLGPFLRRLDSLASTAARACELLIYTACRNAEVCDARWTEFDLNAGIWNIDAARMKAGKPHRVPLSRGALQVLEQQQGKHPVWVFPNARHSASLPGNALRRVMQELQAGAFVPHGFRSTFRTWAAENTLFPRDVCEMALAHSLEDKVEAAYNRGDLLGKRRQLMDAWAAFIESGAALEFTPHPSEG
>NZ_CP047266.1|WP_024684974.1|51854_52109_+|hypothetical-protein
MRDERGGLPDGTWCSRRGFIQPWVVEKPEPVLIRLFNKEQVILFFPTNVAAQVLMCFEFQSKANVWLGSYNECWYHVQTHDLAI
>NZ_CP047266.1|WP_024684973.1|52356_54237_-|methyl-accepting-chemotaxis-protein
MSLKFRHKILLAASGVVVLAFALFTLYNDYLQRTTIRQNLESSVGQAGQLTASSVQNWLSGRILVLENLTQDVAFQGVGSDLSGLVSQSSLVSTFQFTYVGDSKGTFTQRPDVQMPAGYDPRQRPWYKSTVDAGKTILSAPYQASVGGLVVTIASPVKSGGQVTGVVGGDLSLDTLVKIINSVEFGGIGYAFLVSGDGQVIVSPEKDQVMKNLKDIYPGQTLSLDARLREVTLNGQQRILSFTPITGLPSADWYIGLSIDKDKAYAPLSQFRSSAIVAGIIAVVVIALLLSLLIRALMKPLTDMGRAMQDIAQGEGDLTRRLTIQGRDEFADLGSSFNQFVERVHASIVEVSSATLQVHDLSQRVVHSSNSSIVGFDEQSARTNSVAAAINELGAATQEIARNASDASTQASEARTQAESGQVVVEQTIQSMNTLSTKISDSCVQIEQLNASTGNIGQILDVIKGISQQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAHRTQVSADEIHNMIGELQSGSQSAVVNMNESQASSLGSVEVANQAGSRLRDVTRRIGEIDGMNQSVAAATEEQTAVVETLNVDINQINALNQQGVANLNETLKDCAALSQQAGRLKQLVASFKI
>NZ_CP047266.1|WP_159372229.1|54605_56528_+|HAMP-domain-containing-protein
MNSWFANISVNMKLALGFGLVLVFTAILALTGWTSMSGLIARSNWMSDITSLNAQLTKLRVTRLQYMVADGDEKVAETVQVSLDGFKAYQEKLLTSFKSPENVKMLNQLSVVIADYQKSLNNMRSGYKASIALRKELSVNATKATEMLDRILADVSKLDATDPNRFEYYQLIVRAKEDLMQTRYEVRGYLTDITPENEQSAARKLDDALKNLQPLNATFGSTQADALKQLETSLQTYSTTLQGFKTSSGDIAQARKEMTVQGQDIVKLSEAMYQLQLDRRDQESAQARNMQIGCTLLAMILGIIAAVIITRQITRPLQETMAVVDRIASGDLSQTMVVTRRDELGVLQQGIQRMGTTLRELIGGIRDSVVQIASAAEELSAVTEQTSAGVNSQKVETDQVATAMHEMSATVAEVARNAEQASEAASTADKEARAGDKVVSEAIGQIERLAAEVVRSSDAMTLLEQESDKIGKVMDVIKAVAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRGLAQRTQQSTEEIENLVAALQNGTRQVSSIMLSSRELTVSSVQLSRKAGTSLNSITQTVSNIQAMNQQIAAAAEEQSAVAEEISRSIVNVRDVSEQTASASEETAASSVELARLGGQLQTMVSHFKI
>NZ_CP047266.1|WP_024685714.1|57246_58968_+|type-I-secretion-system-permease/ATPase
MRLFLDPKRDIDAALLRYRRLFGVLALFSGVINLLMLVPSIYMMQVFDRVLTSRNETTLLMLSLILLGFFMLSCALEWVRGQVMIKMSAGLDAQLGERVFDAAFQRSLREHNSNPAQVLSDLNSIRQFVTGPGLIALFDAPWLPIYIIATFLFHPWLGVFTVVGSLILAGLGVWNELTTRKSMSEANRLSVSSASYVNSTLQNAEVIQALGMLTPLRRRWFNVQQRVITEQGEASDRSSRIAAMSRFVRMTWQSLALGLGAILVMENQISAGVMIAVSVLLGRAMAPAEALIGSWKQMGNTKSSYQRLNRLLNEFPKAAPPMPLPPPTGALSIDRLVVTPPGLQRPAINGVTITLAKGEVLAVIGPSASGKSTLARAMVGIWPASHGSVRLDNAEISQWSREALGPYLGYLPQDIELFDGTIAENIARFGDVDSTKVIEAAQLAGIHEMILHFTKGYDTLLGVGGLGLSGGQKQRIGLARALYGQPPLVVLDEPNSNLDEAGEAALVQAVRQLKTAGCTVVLVTHRPNILGVVDKLLFLRDGVQHLFGPRDQVLRTLVPTPVQKTAESSNQEA
>NZ_CP047266.1|WP_024685715.1|58975_60307_+|HlyD-family-type-I-secretion-periplasmic-adaptor-subunit
MQSSQHDMTPVPAPDADAAGIARIGIWCLILGLGGFFLWAGLAPLDRGVVGAGTVVVSGERKTVQSRTGGMIDRILVREGDQVQQGQVVVQLNIVQTQSQLDVALGQWLSARAVEERLMAERLDRDSIQWSAQLLEKASDPRARAAMELQGYLFATRRAELASRMKISEHEITSLTQQLAGYEEIKRNHAAQFQFQQQELKGLRELAREGYLPRNRLFEAESNAAQLGAQLASTLSDIGRTRQAINESKLKALQQGQIFRSEAESQLTQVSAQTSSLTDQIKAFDFEVHSASVVAPVAGQVMGLAVHTVGGIAPAGQRLMDIVPQGSSWVVKAQFPPMMADRLKPGLPVDLRFGSLQRVHTPVIVGQVTTVSADQLIDEHTNSPYFSVEVSVSPKDIIKLRDMGLDIKPGMQAEVLVKTGERTLANYLMQPVSERMAGAFKEE
>NZ_CP047266.1|WP_024685716.1|60303_61632_+|TolC-family-outer-membrane-protein
MTVRTPIALLSVFWSCWLLAADDQTLSLVALYDASRLNDATYKVTDYDYQASRQEVAIGRAGLLPQVSINSRYGHGGQFEKQSSANSQDDQFAADSVALSVSQPLFDKGRWASYEQAKARAKLGEAQHEGAGQGLFDRVVEAYFDVAQVENELKLTTQQKASIEGLAKQSKRLFEAGEGTITDLEEAQARLDTTRAQEIELQARRRAALRKLAGRSGTAVNNIPQMQEKSPSTPLLAPEEDLDYWMLKADEAGATLGVSRASIKVAEANLKLQKSGHYPTVALSGRLSRIDQSDINEQSQRQSTYYVGVVVDIPLYQGGGVSASSEKARAALESARTSYDAQFQQLTEDVEANYLGVVAGFEKIKALVTSVRSSQVALTSAEKGYQAGVRSTVEILDAQQRLYSAKRDLLDTKLAMLQSYVNLHTRTGQMTRTQLEKVQSLF

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP047266_2	2.1\|47597\|21\|NZ_CP047266\|CRISPRCasFinder	47597-47617	21	NZ_CP047266	Pseudomonas asturiensis strain CC1524 plasmid pCC1524, complete sequence	47597-47617	0	1.0
NZ_CP047266_2	2.2\|47641\|19\|NZ_CP047266\|CRISPRCasFinder	47641-47659	19	NZ_CP047266	Pseudomonas asturiensis strain CC1524 plasmid pCC1524, complete sequence	47641-47659	0	1.0
NZ_CP047266_2	2.1\|47597\|21\|NZ_CP047266\|CRISPRCasFinder	47597-47617	21	NZ_CP047266	Pseudomonas asturiensis strain CC1524 plasmid pCC1524, complete sequence	47640-47660	2	0.905

1. spacer 2.1|47597|21|NZ_CP047266|CRISPRCasFinder matches to NZ_CP047266 (Pseudomonas asturiensis strain CC1524 plasmid pCC1524, complete sequence) position: , mismatch: 0, identity: 1.0

tcatagctgaaatctgtagtc	CRISPR spacer
tcatagctgaaatctgtagtc	Protospacer
*********************

2. spacer 2.2|47641|19|NZ_CP047266|CRISPRCasFinder matches to NZ_CP047266 (Pseudomonas asturiensis strain CC1524 plasmid pCC1524, complete sequence) position: , mismatch: 0, identity: 1.0

tatagctgaaatctgtagt	CRISPR spacer
tatagctgaaatctgtagt	Protospacer
*******************

3. spacer 2.1|47597|21|NZ_CP047266|CRISPRCasFinder matches to NZ_CP047266 (Pseudomonas asturiensis strain CC1524 plasmid pCC1524, complete sequence) position: , mismatch: 2, identity: 0.905

tcatagctgaaatctgtagtc	CRISPR spacer
gtatagctgaaatctgtagtc	Protospacer
 .*******************

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP047265_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP047265_1

5780633-5780723

Orphan

Consensus_repeat	Method
AACACAAACCCCGTGGGAGCGAGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP047265_1

>merge|NZ_CP047265|1|5780633-5780723|CRISPRCasFinder
AACACAAACCCCGTGGGAGCGAGCACCGTCAGCTTGAACTCCGCGCTGTACACAGATCCTGCCGGATAACACAAAACCCGTGGGAGCGAGC

>NZ_CP047265|1|1|5780633-5780723|CRISPRCasFinder
AACACAAACCCCGTGGGAGCGAGC	ACCGTCAGCTTGAACTCCGCGCTGTACACAGATCCTGCCGGAT
AACACAAAACCCGTGGGAGCGAGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP047265.1\|WP_024689333.1\|5771234_5772176_-\|hydroxymethylbilane-synthase	unknown	unknown	gnl\|CDD\|234612
NZ_CP047265.1\|WP_024689337.1\|5767289_5767817_-\|disulfide-bond-formation-protein-B	unknown	unknown	gnl\|CDD\|376848
NZ_CP047265.1\|WP_024689336.1\|5768047_5769292_-\|heme-biosynthesis-protein-HemY	unknown	unknown	gnl\|CDD\|273126
NZ_CP047265.1\|WP_032610549.1\|5782191_5782338_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227854
NZ_CP047265.1\|WP_024687453.1\|5785180_5786080_+\|tyrosine-recombinase-XerC	unknown	unknown	gnl\|CDD\|234698
NZ_CP047265.1\|WP_024689332.1\|5772403_5773150_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225818
NZ_CP047265.1\|WP_024686359.1\|5775990_5776653_-\|glutathione-S-transferase-family-protein	unknown	unknown	gnl\|CDD\|198344
NZ_CP047265.1\|WP_024686361.1\|5777341_5777590_+\|TIGR02647-family-protein	unknown	unknown	gnl\|CDD\|131695
NZ_CP047265.1\|WP_024687456.1\|5782347_5783595_+\|diaminopimelate-decarboxylase	unknown	unknown	gnl\|CDD\|143501
NZ_CP047265.1\|WP_024689330.1\|5774363_5775758_+\|argininosuccinate-lyase	unknown	unknown	gnl\|CDD\|179143
NZ_CP047265.1\|WP_024687459.1\|5780824_5781232_-\|nucleoside-diphosphate-kinase-regulator	unknown	unknown	gnl\|CDD\|180236
NZ_CP047265.1\|WP_024687457.1\|5781622_5781955_-\|iron-donor-protein-CyaY	unknown	unknown	gnl\|CDD\|234765
NZ_CP047265.1\|WP_024687454.1\|5784443_5785178_+\|DUF484-family-protein	unknown	unknown	gnl\|CDD\|282228
NZ_CP047265.1\|WP_024687451.1\|5786846_5787179_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047265.1\|WP_024687455.1\|5783599_5784430_+\|diaminopimelate-epimerase	unknown	unknown	gnl\|CDD\|234768
NZ_CP047265.1\|WP_024687458.1\|5781371_5781620_-\|DUF1289-domain-containing-protein	unknown	unknown	gnl\|CDD\|377738
NZ_CP047265.1\|WP_024686360.1\|5776848_5777124_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047265.1\|WP_024689331.1\|5773146_5774229_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|225519
NZ_CP047265.1\|WP_024687452.1\|5786072_5786765_+\|HAD-IA-family-hydrolase	unknown	unknown	gnl\|CDD\|182696
NZ_CP047265.1\|WP_024686362.1\|5777774_5780621_+\|class-I-adenylate-cyclase	unknown	unknown	gnl\|CDD\|236522

Protein	Function_ID	Function_description	E-value
NZ_CP047265.1\|WP_024689333.1\|5771234_5772176_-\|hydroxymethylbilane-synthase	gnl\|CDD\|234612	PRK00072, hemC, porphobilinogen deaminase; Reviewed.	0
NZ_CP047265.1\|WP_024689337.1\|5767289_5767817_-\|disulfide-bond-formation-protein-B	gnl\|CDD\|376848	pfam02600, DsbB, Disulfide bond formation protein DsbB. This family consists of disulfide bond formation protein DsbB from bacteria. The DsbB protein oxidizes the periplasmic protein DsbA which in turn oxidizes cysteines in other periplasmic proteins in order to make disulfide bonds. DsbB acts as a redox potential transducer across the cytoplasmic membrane and is an integral membrane protein. DsbB posses six cysteines four of which are necessary for it proper function in vivo.	9.73933e-25
NZ_CP047265.1\|WP_024689336.1\|5768047_5769292_-\|heme-biosynthesis-protein-HemY	gnl\|CDD\|273126	TIGR00540, TPR_hemY_coli, heme biosynthesis-associated TPR protein. Members of this protein family are uncharacterized tetratricopeptide repeat (TPR) proteins invariably found in heme biosynthesis gene clusters. The absence of any invariant residues other than Ala argues against this protein serving as an enzyme per se. The gene symbol hemY assigned in E. coli is unfortunate in that an unrelated protein, protoporphyrinogen oxidase (HemG in E. coli) is designated HemY in Bacillus subtilis. [Unknown function, General].	2.02524e-109
NZ_CP047265.1\|WP_024687452.1\|5786072_5786765_+\|HAD-IA-family-hydrolase	gnl\|CDD\|182696	PRK10748, PRK10748, 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB.	1.90037e-41
NZ_CP047265.1\|WP_024687453.1\|5785180_5786080_+\|tyrosine-recombinase-XerC	gnl\|CDD\|234698	PRK00236, xerC, site-specific tyrosine recombinase XerC; Reviewed.	1.82272e-155
NZ_CP047265.1\|WP_024689332.1\|5772403_5773150_-\|response-regulator-transcription-factor	gnl\|CDD\|225818	COG3279, LytT, Response regulator of the LytR/AlgR family [Transcription / Signal transduction mechanisms].	2.06208e-63
NZ_CP047265.1\|WP_024686359.1\|5775990_5776653_-\|glutathione-S-transferase-family-protein	gnl\|CDD\|198344	cd10424, GST_C_9, C-terminal, alpha helical domain of an unknown subfamily 9 of Glutathione S-transferases. Glutathione S-transferase (GST) C-terminal domain family, unknown subfamily 9; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.	5.41948e-30
NZ_CP047265.1\|WP_024686361.1\|5777341_5777590_+\|TIGR02647-family-protein	gnl\|CDD\|131695	TIGR02647, protein_inhibitor_Id-2-related_protein, TIGR02647 family protein. Members of this family are found, so far, only in the Gammaproteobacteria. The function is unknown. The location on the chromosome usually is not far from housekeeping genes rather than in what is clearly, say, a prophage region. Some members have been annotated in public databases as DNA-binding protein inhibitor Id-2-related protein, putative transcriptional regulator, or hypothetical DNA binding protein. [Hypothetical proteins, Conserved].	2.80211e-37
NZ_CP047265.1\|WP_024687456.1\|5782347_5783595_+\|diaminopimelate-decarboxylase	gnl\|CDD\|143501	cd06828, PLPDE_III_DapDC, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Diaminopimelate Decarboxylase. Diaminopimelate decarboxylase (DapDC, EC 4.1.1.20) participates in the last step of lysine biosynthesis. It converts meso-2,6-diaminoheptanedioate to L-lysine. It is a fold type III PLP-dependent enzyme that contains an N-terminal PLP-binding TIM-barrel domain and a C-terminal beta-sandwich domain, similar to bacterial alanine racemases. DapDC exists as homodimers with active sites that lie at the interface between the TIM barrel domain of one subunit and the beta-sandwich domain of the other subunit. Homodimer formation and the presence of the PLP cofactor are required for catalytic activity.	0
NZ_CP047265.1\|WP_024689330.1\|5774363_5775758_+\|argininosuccinate-lyase	gnl\|CDD\|179143	PRK00855, PRK00855, argininosuccinate lyase; Provisional.	0
NZ_CP047265.1\|WP_024687459.1\|5780824_5781232_-\|nucleoside-diphosphate-kinase-regulator	gnl\|CDD\|180236	PRK05753, PRK05753, nucleoside diphosphate kinase regulator; Provisional.	1.14067e-66
NZ_CP047265.1\|WP_024687457.1\|5781622_5781955_-\|iron-donor-protein-CyaY	gnl\|CDD\|234765	PRK00446, cyaY, frataxin-like protein; Provisional.	1.2789e-51
NZ_CP047265.1\|WP_024687454.1\|5784443_5785178_+\|DUF484-family-protein	gnl\|CDD\|282228	pfam04340, DUF484, Protein of unknown function, DUF484. This family consists of several proteins of uncharacterized function.	4.38494e-70
NZ_CP047265.1\|WP_024687455.1\|5783599_5784430_+\|diaminopimelate-epimerase	gnl\|CDD\|234768	PRK00450, dapF, diaminopimelate epimerase; Provisional.	7.26595e-155
NZ_CP047265.1\|WP_024687458.1\|5781371_5781620_-\|DUF1289-domain-containing-protein	gnl\|CDD\|377738	pfam06945, DUF1289, Protein of unknown function (DUF1289). This family consists of a number of hypothetical bacterial proteins. The aligned region spans around 56 residues and contains 4 highly conserved cysteine residues towards the N-terminus. The function of this family is unknown. Structural modelling suggests this domain may bind nucleic acids.	1.2577e-15
NZ_CP047265.1\|WP_032610549.1\|5782191_5782338_+\|hypothetical-protein	gnl\|CDD\|227854	COG5567, COG5567, Predicted small periplasmic lipoprotein [Cell motility and secretion].	1.13625e-09
NZ_CP047265.1\|WP_024689331.1\|5773146_5774229_-\|sensor-histidine-kinase	gnl\|CDD\|225519	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms].	8.06818e-55
NZ_CP047265.1\|WP_024686362.1\|5777774_5780621_+\|class-I-adenylate-cyclase	gnl\|CDD\|236522	PRK09450, cyaA, class I adenylate cyclase.	0

>NZ_CP047265.1|WP_024686362.1|5777774_5780621_+|class-I-adenylate-cyclase
MTRNPEIRPDLDEGIDRKVLTQLRNRFLTLNDGRYARAIEGMSTRQQTVLTLLPLFFHVNHPLLPGYVSSITPAGVSHYEPDALVLAEAQRMTRSFSYKVRHGNPPQPIHGLFLMGSLGTLAQAEQSDMDVWVCHDSELEADAVAELRKKCQALEAWATTMGAEAHFFLIDPQRFRKGDRDTQLSSDDCGTTQHYLLLDEFYRTAIWLAGRTPMWWLVPVYEENGYEDYTHTLLSKRFIRADEVIDLGPMAQIPPAEFVGAGLWQLFKAIDSPYKSVLKLLLIEVYSSEHPDVQCLSMRFKQAVFANRLDLDELDPYMVVYRRIEEHLQARKESERLELVRRSLYLKVNKKLTGPTRQRSNSWQRQLLERLTQEWGWDERQLALLDSRSQWKVRQVAHERRALVNELNYSYRFQTQFARLQSTADALNARDLTVLGRRLYAAFERKAGKVEFINPGIAPDLAEDTLTLVHSPDKREPGKHQWALYNGSLGTHEWANFSPIKRSRELLDLLAWCHRNNVIDATTRVALHPGSSDLSEFELFNLLGALQQTIELPLPDVSDDALLRPSEPREILLLVNVGVDPLRHHRDLNILMTTERTDSLSYAGVRENLVLTLDQITLNSWNETLVNRYDGPHALLDCLSELLSSLPQGANQPRIHVRCFCHNRAPAIAQRVEELTDTARLLLARRLNHRYLIQVQQQYHVLEMVPGQVGHVVVNSLPGLFKYLGEEQPHYSPLHLDPHALDGHDLALILPFGQPECIQVFYRVSDDEADLYVLDEHNSLWHQRVPWHDEQSLLMPLQRFFHSLVYRRGASLPLDNPDEPTLLETLYYQLMPSGASRARRIEPRRAPTAADKPFYDVQAIIEETSPGQLNVTLYCDNSEFSELEYGDQLYQAVARQILGKRLEPKRYRCYITDLDLSGLLNDGHGQSILFLRHKAELEKLLNEAMDDA
>NZ_CP047265.1|WP_024686361.1|5777341_5777590_+|TIGR02647-family-protein
MSYTPELVAELEILALFNLGNTQEGLKVHHVASPSAIAAAKRLFEKGLTTQVDGGYLTSLGLEAAEHAQSLLTILDVSKEAA
>NZ_CP047265.1|WP_024686360.1|5776848_5777124_+|hypothetical-protein
MTDAIDNDEEEFAASTLIEAIENQIEADNPPAAKATFNKLTLVGYERDDILEMMAHVLAIEIDALLDQDRPFDTQWYETALRALPELPPEK
>NZ_CP047265.1|WP_024686359.1|5775990_5776653_-|glutathione-S-transferase-family-protein
MLKLYGFASSNYFNMVKLALLEKQLPFEVVPLFGCQSPEVLAVSARGKVPVLGTAEGFISETDVILRYLEETFPDRPLLPADPFSRAQVWTIAKEIELYIELPARVCYAEVIFGGRPTPLDLKAKARRDLVKGVAALAQRARFTPYVAGERFSVADVYFLYSIDLAQQVGERLFDEDFLGDMPKARSLLERLALNPNVQRVAADREADWPTFMARVRPAG
>NZ_CP047265.1|WP_024689330.1|5774363_5775758_+|argininosuccinate-lyase
MSTDKTNQSWGGRFSEPVDAFVARFTASVTFDQRLYRHDIMGSIAHATMLAKVGVLTDAERDTIIEGLKSIQTEIEAGTFEWRVDLEDVHMNIEARLTDRIGITGKKLHTGRSRNDQVATDIRLWLRDEIDLILSEITRLQQGLLGQAEREADTIMPGFTHLQTAQPVTFGHHMLAWFEMLSRDYERLVDCRKRLNRMPLGSAALAGTTYPIDRELTCKLLGFDAVGGNSLDGVSDRDFAIEFCAAASVAMMHLSRFSEELVLWTSAQFQFIDLPDRFCTGSSIMPQKKNPDVPELVRGKSGRVFGALMGLLTLMKGQPLAYNKDNQEDKEPLFDAADTLRDSLRAFADMIPAIKPKHAIMREAALRGFSTATDLADYLVRRGLPFRDCHEIVGHAVKYGVETGKDLAEMSLEELRQFSDQIEQDVFAVLTLEGSVNARDHIGGTAPGQVRAAVVRGQALLASR
>NZ_CP047265.1|WP_024689331.1|5773146_5774229_-|sensor-histidine-kinase
MRDDPVKRDAGRRPGKEFFLPELCLPQALLVLVVLAELLVLVLVLVEPMRAGFDWVRLALMSLFVQWIVLLSAALLCGLRPWLARLSPGLAGLLGCLLVVGLTLLCTAVTDVCQLTGRITVGGMVDRYIRYSLIALIMSALMLRYFYLQSQWRKQQQGELRARIESLQARIRPHFLFNTLNSIASLVASNPVKAEQAVLDLSDLFRASLAKPGSLVTWGEELALAKRYLSIEQYRLGERLQLDWRVSAIPDDLPIPQLTLQPLLENALIYGIAPRVDGGVVTVEADYEGGEFILRVSNPYEEVATRQTSNGTQQALTNIGARITALFGPYASLSVERRDGRHYTCLRYPCARLTQEARAI
>NZ_CP047265.1|WP_024689332.1|5772403_5773150_-|response-regulator-transcription-factor
MNVLIVDDEPLARERLSRLVSEIEGYRVLEPSATNGEEALALIDNLKPDVVLLDIRMPGIDGLQVAAKLCEREAPPAVVFCTAHDEFALDAFQVSAVGYLVKPVRPEHLIEALRKAERPNRVQLAAMTRPAAESGNGPRSHISARTRKGIELIPLDQVIYFIADHKYVTLRHEGGEVLLDEPLKALEDEFGDRFVRIHRNALVARERIERLQRTPLGHFQLFLRGLNGDALIVSRRHVAGVRKMMQQL
>NZ_CP047265.1|WP_024689333.1|5771234_5772176_-|hydroxymethylbilane-synthase
MSSREIRIATRKSALALWQAEYVKDRLEQAHPGLIVTLVPMVSRGDKLLDSPLSKIGGKGLFVKELETALLENAADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTYASLEALPAGSIVGTSSLRRQAQLLARRPDLTIHFLRGNVNTRLAKLDNGEYDAIILAAAGLIRLGFEDRITSAISVDDSLPAGGQGAVGIECRSVDAEIHALLAPLHHEDTAVRVIAERSLNKHLNGGCQVPIACYAVLEGDQIWLRGLVGDPSGSLLLHAEARASQTAAQALGVQVAEALLAQGAAKILKAVYGEPDDE
>NZ_CP047265.1|WP_024689336.1|5768047_5769292_-|heme-biosynthesis-protein-HemY
MKRLYAVLFIAIVAAALIGVAIAEHSGYVLIAYQNFRYESSLWATLALLVVVLLLIVMVRWLIYLLTTSGRVVNPWSRRNRRRRIQLAIEQGQMDLAEGRWASAQRHLHRAAEADTHPLLYYIGAARAANEQGRYEDSDSLLERALERQPQAELAIALNHAQLQQDRGDTDGALTTLQAMKERHPHNPQVLRQLQRLYQQRGDWSELIRLMPELRKDKVLPPKELAELERRAWGENLTLAAYREEGESALTGLPSLEKAWQGLSSAQRQEPQLVLAYADQLRRLGADAQAEEVLRAALKRDYHSHLARLYGLVRGSDPARQLQTAEGWLKHHPGDPSLLLSLGRICLQSRLWGKARDYLESSLRLERNPETCAELARLLAQLGETDRSNQLFQEGLGLLDERFLARPLPALTSM
>NZ_CP047265.1|WP_024689337.1|5767289_5767817_-|disulfide-bond-formation-protein-B
MHLARTRLLFFLAFLTCALIIAAVLYLQHSVGLEPCPLCLFQRASLVSCGVLMLAAACHSPSPAGWCRYCVGLLAVALTGVTVAGLQVWLQTASAEELTPVIATLQQALDSIAPGRWSEGLPGGAAFCAQITWSLFGISLPEWSLLAFVAIGLLALYPLLSELSRWISAESRTDD
>NZ_CP047265.1|WP_024687459.1|5780824_5781232_-|nucleoside-diphosphate-kinase-regulator
MNTAPSLILTRLDVQRLENLIDSLDDSTPGVLALQAELDRAEEVVGHDEVPAGVVTMNSRVHCREEGSGKDYHLKLVYPQDAGTEGTVSVLAPMGSALLGLQVGQHIDWPAPGGKTLKLTLLAVEYQPEAAGEYQ
>NZ_CP047265.1|WP_024687458.1|5781371_5781620_-|DUF1289-domain-containing-protein
MSQTPQPAAVRPPKPLYSNVSPAVPSPCISTCRLDEHKVCLGCFRHVEDIREWRSADDERRRQIRHEAERRRSHAETGHAAG
>NZ_CP047265.1|WP_024687457.1|5781622_5781955_-|iron-donor-protein-CyaY
MSLTEARFHDLVDATQQNLEDVFDESGLDVDLENSAGVLTVKFENGSQLIFSRQEPLRQMWLAARSGGFHFDYDEEHSRWTCDTSDELLSEMLARMTLEQAGVELDFDEI
>NZ_CP047265.1|WP_032610549.1|5782191_5782338_+|hypothetical-protein
MKRLISSLAALVAVACLVTACGQKGPLYLPDDTKSPDEQAKSQSHKHL
>NZ_CP047265.1|WP_024687456.1|5782347_5783595_+|diaminopimelate-decarboxylase
MDAFNYRDGELFAEGVALSALADRFGTPTYVYSRAHIEAQYRAYTDALDGMPHLVCFAVKANSNLGVLNVLARLGAGFDIVSRGELERVLAAGGKAEKIVFSGVGKTREDMRRALEVGVHCFNVESTDELERLQTVAAELNVRAPISLRVNPDVDAGTHPYISTGLKENKFGIAIADAEDVYVRASQLPNLEVIGVDCHIGSQLTTLAPFIDALDRLLDLVDRLGDCGIHLHHIDLGGGLGVRYRDEEPPLAADYIKAVRERLAGRDLGLLFEPGRFIVANAGVLLTRVEYLKHTEHKDFAIVDAAMNDLIRPALYQAWMDVTAVRPRDGAARAYDIVGPICETGDFLAKGRELALAEGDLLAVHSAGAYGFVMSSNYNTRGRAAEVLVDDTQAFEVRRRETVAELFAGESLLPE
>NZ_CP047265.1|WP_024687455.1|5783599_5784430_+|diaminopimelate-epimerase
MLLRFTKMHGLGNDFMVLDLVSQHAHILPKHAKQWGDRHTGVGFDQLLLVEAPNNPDVDFRYRIFNSDGSEVEQCGNGARCFARFVLDKRLTAKKQIRVETKSGIIELDIRSDGQISVNMGPPRLIPDEIPFQAAAQATSYTVDVDGQSVELAAVSMGNPHAVLRVDDINNAPVHELGPKIEHHPRFPARVNVGFLHVVDRQRAQLRVWERGAGETQACGTGACAAAVAAITQGWMMSPLLIDLPGGRLSIEWAGPGHPVMMTGPAVRVYEGQVRL
>NZ_CP047265.1|WP_024687454.1|5784443_5785178_+|DUF484-family-protein
MTDQPQASTGTPSESPADSAAPNLEAEAVIAFLLQHPDFFAEHDELLVSMRIPHQRGDTVSLVERQLKLLRERNIEMRHRLSQLMDVARDNDRLFEKTRRLNLALMDATSLDEIVIAVEDSLRQDFQVPYVSLILFSDNPMQVGRWVSSAEAQKAIGGLIGEKVVCGALREHELAFLFGAEQGKEVGSTAIASLNHLGLHGVLAIGSRDPQHYKSSVGTLFLSYIADVLSRLLPRFAHSLRSVR
>NZ_CP047265.1|WP_024687453.1|5785180_5786080_+|tyrosine-recombinase-XerC
MEQHLDAYCMHLRSERQVSPHTLEAYRRDLDKVLAFCKKAGLSNWTALDIQHLRSFTARQHQHGQSSRSLARMLSAVRGFYKYLNREGVCEHDPANGLSPPKGERRLPKTLDADRTSQLLDGGVEDDFMARRDQAILELLYSSGLRLSELTGLNLEQLDLRDGLVQVLGKGSKTRLLPVGSKARQALEAWLPLRALANPKDDAVFISQKGTRLGPRAVQSRVKAVGERELGQNLHPHMLRHSFASHLLESSQDLRAVQELLGHADIKTTQIYTHLDFQHLATVYDSAHPRAKRKGSVDD
>NZ_CP047265.1|WP_024687452.1|5786072_5786765_+|HAD-IA-family-hydrolase
MIKLVTFDLDDTLWDTAPAIVGAEAALRDWLAEHAPRLGPVPVEHLWEIRSRLIEADPSFKHRISALRRRVLFHALEDTGYDADEAQDLADQGFEVFLHGRHQVQVFPDVQPTLEILAKTFTLGVITNGNADVRRLGLADYFSFALCAEDLGIGKPDPAPFLEALRRGNADASAAVHVGDHPSDDIAGAQRAGMRAIWYNPQGKAWDADQLPDAEIHNLSQLPEVLARWA
>NZ_CP047265.1|WP_024687451.1|5786846_5787179_-|hypothetical-protein
MSDDDNDNDDLVDDLEGEEDGDEGLVAATDDDAVEVDDAEVSAPVAKGKAKAAVSVDELPSVEAKNKERDALARAMEEFLARGGKVQEVEANVVADPPKKPDNKYGSRPI

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Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

342753 : 461378

110

Pseudomonas_phage(45.24%)

portal,head,tail,capsid,integrase,plate,terminase,bacteriocin,lysis,transposase

attL 410013:410059|attR 443785:443831

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_024687047.1\|342753_343806_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_024687048.1\|343769_345629_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_024687049.1\|345625_346141_-\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_024687050.1\|346134_346584_-	hypothetical protein	NA	NA	NA	NA
WP_024687051.1\|346580_347039_-	hypothetical protein	NA	NA	NA	NA
WP_024687052.1\|347110_347599_-	type VI secretion system tube protein Hcp	NA	NA	NA	NA
WP_024687053.1\|347762_349256_-	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_024687054.1\|349271_349787_-	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_024687055.1\|349882_350911_-	type VI secretion system protein TssA	NA	NA	NA	NA
WP_024687056.1\|351302_352745_+	type VI secretion system-associated FHA domain protein TagH	NA	NA	NA	NA
WP_024687057.1\|352792_353299_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_024687058.1\|353314_354649_+\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_024687059.1\|354655_355969_+	DotU family type VI secretion system protein	NA	NA	NA	NA
WP_024687060.1\|355965_359469_+	type VI secretion system membrane subunit TssM	NA	NA	NA	NA
WP_024687061.1\|359465_360119_+	type VI secretion system-associated protein TagF	NA	NA	NA	NA
WP_024687062.1\|360118_360847_+	serine/threonine-protein phosphatase	NA	NA	NA	NA
WP_024687063.1\|360858_363906_+	protein kinase	A0A2P1EMR8	Moumouvirus	3.0e-21	29.6
WP_024687064.1\|363905_364622_+	ABC transporter ATP-binding protein	A0A2R8FG22	Brazilian_cedratvirus	7.5e-08	29.3
WP_024687065.1\|364621_365815_+	ABC transporter permease	NA	NA	NA	NA
WP_024687066.1\|365807_367532_+	SUMF1/EgtB/PvdO family nonheme iron enzyme	NA	NA	NA	NA
WP_024687067.1\|367618_368560_+	hypothetical protein	NA	NA	NA	NA
WP_024687068.1\|368649_369555_+	hypothetical protein	NA	NA	NA	NA
WP_024687069.1\|369551_370058_+	hypothetical protein	NA	NA	NA	NA
WP_024687070.1\|370720_372382_+	acyl-CoA synthetase	A0A2H4PQU7	Staphylococcus_phage	5.8e-27	26.5
WP_024687071.1\|372348_373170_-	hypothetical protein	NA	NA	NA	NA
WP_024687072.1\|373346_375278_+	RecQ family ATP-dependent DNA helicase	F2NZ48	Diadromus_pulchellus_ascovirus	2.9e-54	39.9
WP_024687073.1\|375345_375828_-	hypothetical protein	NA	NA	NA	NA
WP_024687074.1\|376024_378361_-	FdhF/YdeP family oxidoreductase	NA	NA	NA	NA
WP_024687075.1\|378357_379194_-	formate dehydrogenase accessory sulfurtransferase FdhD	NA	NA	NA	NA
WP_024687076.1\|379296_380178_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_024687077.1\|380329_380782_+	peptidoglycan-binding protein LysM	NA	NA	NA	NA
WP_024686517.1\|381611_382274_-	GMP/IMP nucleotidase	NA	NA	NA	NA
WP_024686518.1\|382372_382939_+	ADP compounds hydrolase NudE	NA	NA	NA	NA
WP_024686519.1\|382935_383778_+	3'(2'),5'-bisphosphate nucleotidase CysQ	NA	NA	NA	NA
WP_024685129.1\|384244_384730_-	thioesterase	NA	NA	NA	NA
WP_024685128.1\|384716_386102_-	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA
WP_024685127.1\|386098_387913_-	sensor histidine kinase	NA	NA	NA	NA
WP_024685126.1\|388083_388629_-	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A291LA62	Escherichia_phage	1.7e-52	56.4
WP_024685125.1\|388625_389501_-	glucose-1-phosphate thymidylyltransferase RfbA	A0A291LA53	Escherichia_phage	1.2e-105	63.8
WP_024685124.1\|389497_390580_-	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	7.4e-100	54.5
WP_024685123.1\|390827_393701_+	aminotransferase	A0A1V0SKB7	Klosneuvirus	2.2e-18	24.2
WP_024685122.1\|393918_395025_+	agmatine deiminase	M1I1E2	Acanthocystis_turfacea_Chlorella_virus	7.3e-103	49.7
WP_050586929.1\|395235_395442_+	hypothetical protein	NA	NA	NA	NA
WP_024685121.1\|395659_396940_+	OprD family porin	NA	NA	NA	NA
WP_024685723.1\|397810_398347_-	hypothetical protein	NA	NA	NA	NA
WP_024685724.1\|398474_399035_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_024685725.1\|399139_399865_-	hypothetical protein	NA	NA	NA	NA
WP_024685726.1\|400158_400398_+	type II toxin-antitoxin system RelB/DinJ family antitoxin	A0A2H4JBG1	uncultured_Caudovirales_phage	1.4e-27	78.5
WP_024685727.1\|400387_400579_+	hypothetical protein	NA	NA	NA	NA
WP_024685728.1\|400807_402397_+	TIGR04141 family sporadically distributed protein	NA	NA	NA	NA
WP_032622591.1\|402449_402710_-	hypothetical protein	NA	NA	NA	NA
WP_024686525.1\|402855_404400_-\|transposase	IS66 family transposase	S5VTD3	Leptospira_phage	2.0e-82	36.4
WP_080266043.1\|404418_404775_-	IS66 family insertion sequence element accessory protein TnpB	S5VXZ8	Leptospira_phage	4.4e-17	38.2
WP_024687790.1\|404968_407485_-	DEAD/DEAH box helicase	NA	NA	NA	NA
WP_024687789.1\|407488_408415_-	DUF1837 domain-containing protein	NA	NA	NA	NA
410013:410059	attL	NA	NA	NA	NA
WP_024687788.1\|410250_411783_-	GGDEF domain-containing protein	A0A127AWB9	Bacillus_phage	2.0e-18	36.4
WP_024687787.1\|412083_413232_-\|integrase	integrase	V9IQN0	Stenotrophomonas_phage	1.0e-75	41.0
WP_024687786.1\|413228_413441_-	hypothetical protein	NA	NA	NA	NA
WP_024687785.1\|413575_413848_-	hypothetical protein	NA	NA	NA	NA
WP_024687784.1\|413944_414229_-	hypothetical protein	NA	NA	NA	NA
WP_024687783.1\|414244_417049_-	toprim domain-containing protein	A0A2H4J936	uncultured_Caudovirales_phage	0.0e+00	62.5
WP_024687782.1\|417051_417285_-	hypothetical protein	NA	NA	NA	NA
WP_024687781.1\|417356_417716_-	hypothetical protein	NA	NA	NA	NA
WP_024687780.1\|417712_418186_-	hypothetical protein	A0A2H4JG61	uncultured_Caudovirales_phage	4.8e-35	52.0
WP_024687779.1\|418215_418437_-	DNA-binding protein	A0A2H4JE67	uncultured_Caudovirales_phage	2.1e-09	50.8
WP_152535039.1\|418353_418887_+	helix-turn-helix domain-containing protein	K4NXA8	Burkholderia_phage	4.7e-15	46.5
WP_024687777.1\|418974_419154_+	hypothetical protein	NA	NA	NA	NA
WP_024687776.1\|419187_419457_-	hypothetical protein	Q8HA47	Vibrio_phage	7.4e-09	48.1
WP_080266096.1\|419523_420399_-\|portal	phage portal protein	A0A0U4B0L9	Pseudomonas_phage	2.1e-100	77.0
WP_024687774.1\|420310_422371_-\|terminase	terminase	A0A0U4JIZ9	Pseudomonas_phage	1.5e-271	71.1
WP_024687773.1\|422531_423455_+	hypothetical protein	A0A0U4JVV6	Pseudomonas_phage	1.2e-58	55.1
WP_024687772.1\|423456_424497_+\|capsid	phage major capsid protein, P2 family	A0A0U4K5I9	Pseudomonas_phage	1.3e-120	66.2
WP_024687771.1\|424493_425216_+\|terminase	terminase	A0A0U4JEJ1	Pseudomonas_phage	2.9e-84	70.7
WP_024687770.1\|425355_425655_-	hypothetical protein	NA	NA	NA	NA
WP_024687769.1\|425690_426152_+\|head	head completion/stabilization protein	A0A0U4J933	Pseudomonas_phage	1.0e-42	60.1
WP_024687768.1\|426148_426592_+\|tail	tail protein	A0A0U4IBS7	Pseudomonas_phage	4.9e-50	64.1
WP_024687767.1\|426581_427259_+	virion morphogenesis protein	A0A0U4ISN1	Pseudomonas_phage	7.8e-55	54.3
WP_024687766.1\|427274_428393_+	DUF2586 family protein	A0A0U4KLE6	Pseudomonas_phage	1.4e-125	64.0
WP_024687765.1\|428399_428852_+	DUF2597 family protein	A0A0U3TH58	Pseudomonas_phage	4.7e-56	70.7
WP_024687764.1\|428851_429061_+	TraR/DksA family transcriptional regulator	A0A0U4IIN4	Pseudomonas_phage	4.1e-15	58.5
WP_024687763.1\|429060_429267_+	hypothetical protein	NA	NA	NA	NA
WP_024687762.1\|429263_429788_+	lysozyme	NA	NA	NA	NA
WP_024687761.1\|429784_430267_+\|lysis	lysis protein	I6WLR5	Burkholderia_virus	3.0e-08	35.8
WP_024687760.1\|430289_430580_+	hypothetical protein	A0A0U4B0P2	Pseudomonas_phage	2.6e-23	66.7
WP_024687759.1\|430750_432874_+\|tail	phage tail tape measure protein	A0A0U4IJ81	Pseudomonas_phage	6.3e-135	41.1
WP_024687758.1\|432870_433185_+	DUF2590 family protein	A0A0U4B0N5	Pseudomonas_phage	1.9e-32	74.5
WP_024687757.1\|433181_434354_+	hypothetical protein	A0A0U4JJ14	Pseudomonas_phage	1.1e-154	70.9
WP_024687756.1\|434350_434950_+\|tail	phage tail protein	A0A0U4JVX3	Pseudomonas_phage	1.9e-65	68.0
WP_024687755.1\|434961_437268_+	hypothetical protein	A0A0U4K5K2	Pseudomonas_phage	3.7e-48	58.9
WP_024687754.1\|437278_437794_+	DUF4376 domain-containing protein	NA	NA	NA	NA
WP_024687753.1\|437790_438717_+	hypothetical protein	NA	NA	NA	NA
WP_024687752.1\|438713_439259_+	hypothetical protein	A0A0U4J942	Pseudomonas_phage	8.7e-49	58.7
WP_024687751.1\|439255_439966_+	hypothetical protein	A0A2I7RNK1	Vibrio_phage	1.3e-39	39.3
WP_024687750.1\|439938_440910_+	hypothetical protein	A0A0U4IBV2	Pseudomonas_phage	3.3e-115	62.5
WP_032622814.1\|440996_441365_-	hypothetical protein	NA	NA	NA	NA
WP_024687748.1\|441519_442188_-	hypothetical protein	NA	NA	NA	NA
WP_024685598.1\|444680_445709_+	J domain-containing protein	F2Y2Y5	Organic_Lake_phycodnavirus	2.7e-06	42.6
443785:443831	attR	NA	NA	NA	NA
WP_024685597.1\|446178_446502_+	hypothetical protein	NA	NA	NA	NA
WP_032622577.1\|446798_448007_-	methyltransferase	NA	NA	NA	NA
WP_024685596.1\|448061_448751_-	ABC transporter permease	NA	NA	NA	NA
WP_024685595.1\|448747_449443_-	ABC transporter permease	NA	NA	NA	NA
WP_024685594.1\|449508_450270_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_024685593.1\|450283_451057_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	3.5e-19	32.0
WP_024685592.1\|451595_452987_+	GABA permease	NA	NA	NA	NA
WP_024684678.1\|454138_454624_-	hypothetical protein	NA	NA	NA	NA
WP_024684677.1\|455026_456385_-	PAS domain-containing protein	NA	NA	NA	NA
WP_024684676.1\|456743_457025_-	hypothetical protein	NA	NA	NA	NA
WP_050586920.1\|457180_459625_-	DUF4214 domain-containing protein	NA	NA	NA	NA
WP_152534980.1\|459686_460136_-	hypothetical protein	NA	NA	NA	NA
WP_080265936.1\|460367_461378_+\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA

DBSCAN-SWA_2

683798 : 762419

Bacillus_virus(30.0%)

protease,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_024686428.1\|683798_685124_-\|protease	Zn-dependent protease	NA	NA	NA	NA
WP_024686429.1\|685123_686566_-	TldD/PmbA family protein	NA	NA	NA	NA
WP_024686426.1\|687208_688909_-\|holin	choline dehydrogenase	A0A1V0S9M4	Catovirus	1.5e-51	29.7
WP_024686425.1\|689109_690582_-	betaine-aldehyde dehydrogenase	NA	NA	NA	NA
WP_024686424.1\|690688_691282_-	transcriptional regulator BetI	NA	NA	NA	NA
WP_024685773.1\|691627_692806_-\|holin	choline ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	2.5e-24	36.1
WP_024685774.1\|692802_693648_-\|holin	choline ABC transporter permease subunit	NA	NA	NA	NA
WP_024685775.1\|693715_694663_-\|holin	choline ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_024685776.1\|695562_696666_+	GlxA family transcriptional regulator	NA	NA	NA	NA
WP_159372162.1\|696715_698341_-	HAMP domain-containing protein	A0A2H4J162	uncultured_Caudovirales_phage	3.1e-81	51.0
WP_024686523.1\|698760_698994_+	hypothetical protein	NA	NA	NA	NA
WP_024686524.1\|698990_699293_+	cell division protein ZapA	NA	NA	NA	NA
WP_024687348.1\|699357_699618_-	hypothetical protein	NA	NA	NA	NA
WP_024687349.1\|699842_700679_+	23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ	NA	NA	NA	NA
WP_024687350.1\|700739_701387_-	peptide-methionine (S)-S-oxide reductase MsrA	NA	NA	NA	NA
WP_024687351.1\|701534_704228_-	GGDEF and EAL domain-containing protein	G3MA91	Bacillus_virus	5.7e-16	31.9
WP_024687352.1\|704646_706293_-	dihydrolipoyllysine-residue acetyltransferase	NA	NA	NA	NA
WP_024687353.1\|706435_709081_-	pyruvate dehydrogenase (acetyl-transferring), homodimeric type	NA	NA	NA	NA
WP_024687354.1\|709463_712421_+	bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase	NA	NA	NA	NA
WP_024687355.1\|712550_713585_+	lipopolysaccharide heptosyltransferase II	NA	NA	NA	NA
WP_024687356.1\|713587_714652_+	lipopolysaccharide heptosyltransferase I	NA	NA	NA	NA
WP_024687357.1\|714651_715773_+	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_024687358.1\|715772_716579_+	lipopolysaccharide core heptose(I) kinase RfaP	NA	NA	NA	NA
WP_024687359.1\|716578_717313_+	heptose kinase	NA	NA	NA	NA
WP_024687360.1\|717309_718089_+	LPS kinase	NA	NA	NA	NA
WP_024687361.1\|718088_719534_+	phosphotransferase	NA	NA	NA	NA
WP_024687362.1\|719561_725639_-	membrane-targeted effector domain-containing toxin	NA	NA	NA	NA
WP_024687363.1\|725958_727716_+	carbamoyltransferase	E3SL71	Synechococcus_phage	3.3e-33	29.7
WP_024687364.1\|727699_728830_+	glycosyltransferase	NA	NA	NA	NA
WP_024687365.1\|728829_729726_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_024687366.1\|729722_731132_+	PIG-L family deacetylase	NA	NA	NA	NA
WP_024687367.1\|731162_732119_+	glycosyltransferase family 1 protein	NA	NA	NA	NA
WP_024687368.1\|732150_732924_+	glycosyltransferase family 2 protein	NA	NA	NA	NA
WP_024687369.1\|732913_734077_+	membrane protein	NA	NA	NA	NA
WP_024687370.1\|734121_734760_-	toluene tolerance protein	NA	NA	NA	NA
WP_024687371.1\|734876_736679_+	lipid A export permease/ATP-binding protein MsbA	W8CYL7	Bacillus_phage	1.6e-54	31.2
WP_024687372.1\|736864_738286_+	bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE	A0A0K0KVL9	Prochlorococcus_phage	2.9e-19	38.9
WP_024687373.1\|738324_739287_-	hypothetical protein	NA	NA	NA	NA
WP_024687374.1\|739323_740139_-	aldo/keto reductase	NA	NA	NA	NA
WP_024687375.1\|740135_741311_-	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_024687376.1\|741359_741692_-	multidrug DMT transporter	NA	NA	NA	NA
WP_024687377.1\|741829_743110_+	3-deoxy-D-manno-octulosonic acid transferase	NA	NA	NA	NA
WP_024687549.1\|743541_744981_-	TolC family outer membrane protein	NA	NA	NA	NA
WP_024687550.1\|745401_747291_+	phosphomethylpyrimidine synthase ThiC	NA	NA	NA	NA
WP_024685967.1\|747618_748908_+	putative hydroxymethylpyrimidine transporter CytX	NA	NA	NA	NA
WP_024685966.1\|748876_749623_-	DUF3298 domain-containing protein	NA	NA	NA	NA
WP_024685965.1\|749831_750449_+	NUDIX domain-containing protein	A0A1S6L1P8	Vibrio_phage	1.1e-20	37.9
WP_024652407.1\|750439_750892_+	DUF1249 domain-containing protein	NA	NA	NA	NA
WP_024685964.1\|751252_751699_+	hypothetical protein	NA	NA	NA	NA
WP_152534905.1\|751733_752159_+	hypothetical protein	NA	NA	NA	NA
WP_024685962.1\|752151_752601_+	hypothetical protein	NA	NA	NA	NA
WP_032622617.1\|752903_753350_+	hypothetical protein	NA	NA	NA	NA
WP_024696356.1\|753783_755415_-	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	6.6e-60	41.7
WP_024696357.1\|755610_755871_-	hypothetical protein	NA	NA	NA	NA
WP_024687546.1\|756280_757300_+	AraC family transcriptional regulator	NA	NA	NA	NA
WP_032622794.1\|757406_758213_+	3',5'-cyclic-AMP phosphodiesterase	NA	NA	NA	NA
WP_024687544.1\|758301_758919_+	esterase	NA	NA	NA	NA
WP_024687543.1\|758995_760900_+	DNA topoisomerase IV subunit B	G3M9Z3	Bacillus_virus	5.7e-95	36.4
WP_024687542.1\|760896_761901_+	DNA topoisomerase IV subunit B	NA	NA	NA	NA
WP_024687541.1\|761897_762419_+\|protease	TIGR02281 family clan AA aspartic protease	NA	NA	NA	NA

DBSCAN-SWA_3

1856057 : 1882741

Pseudomonas_phage(44.44%)

protease,portal,holin,head,capsid,tail,integrase,terminase

attL 1848369:1848383|attR 1861086:1861100

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1848369:1848383	attL	NA	NA	NA	NA
WP_024688045.1\|1856057_1857248_-\|integrase	site-specific integrase	A0A1B0Z061	Pseudomonas_phage	4.2e-112	54.3
WP_024688046.1\|1857482_1857704_-	hypothetical protein	A0A2H4J5U9	uncultured_Caudovirales_phage	4.3e-15	59.4
WP_024688047.1\|1857798_1858041_-	hypothetical protein	NA	NA	NA	NA
WP_080266105.1\|1858030_1858495_-	HNH endonuclease	A0A1V0E8E4	Vibrio_phage	4.9e-08	33.7
WP_024688049.1\|1858586_1858787_-	hypothetical protein	NA	NA	NA	NA
WP_024688051.1\|1859516_1859996_-	hypothetical protein	NA	NA	NA	NA
WP_024688052.1\|1859992_1860562_-	hypothetical protein	A0A0N9SLM1	Escherichia_phage	2.6e-43	46.3
WP_024688053.1\|1861048_1861357_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
1861086:1861100	attR	NA	NA	NA	NA
WP_080266106.1\|1861533_1862232_-	S24 family peptidase	J7I0S2	Pseudomonas_phage	4.1e-51	59.6
WP_080266104.1\|1862478_1862772_+	hypothetical protein	NA	NA	NA	NA
WP_024688056.1\|1862768_1862954_+	hypothetical protein	NA	NA	NA	NA
WP_024688057.1\|1863092_1863425_+	hypothetical protein	NA	NA	NA	NA
WP_152535042.1\|1863421_1863760_+	hypothetical protein	NA	NA	NA	NA
WP_024688059.1\|1863756_1864056_+	hypothetical protein	NA	NA	NA	NA
WP_032622843.1\|1864103_1864409_+	hypothetical protein	NA	NA	NA	NA
WP_024688061.1\|1864405_1865131_+	hypothetical protein	A0A1W6JTB2	Pseudomonas_phage	1.6e-53	50.6
WP_024688062.1\|1865127_1865718_+	hypothetical protein	NA	NA	NA	NA
WP_024688063.1\|1865714_1866476_+	helix-turn-helix domain-containing protein	A0A0P0ZC04	Stx2-converting_phage	1.2e-40	51.9
WP_024688064.1\|1866472_1867261_+	ATP-binding protein	A0A0A0YRV1	Pseudomonas_phage	6.9e-63	48.4
WP_024688065.1\|1867257_1868634_+	AAA family ATPase	A0A2H4J8N1	uncultured_Caudovirales_phage	4.2e-140	57.2
WP_024688066.1\|1868630_1868915_+	hypothetical protein	A0A1W6JTC1	Pseudomonas_phage	2.1e-14	42.7
WP_024688067.1\|1868911_1869301_+	antitermination protein Q	A0A1W6JTD2	Pseudomonas_phage	3.1e-40	60.9
WP_024688069.1\|1869913_1870093_+	hypothetical protein	NA	NA	NA	NA
WP_024688070.1\|1870110_1870350_-	hypothetical protein	NA	NA	NA	NA
WP_024688071.1\|1870836_1871202_+	hypothetical protein	NA	NA	NA	NA
WP_024688072.1\|1871337_1871982_-	CopG family transcriptional regulator	A0A0D4DCG1	Acinetobacter_phage	1.1e-23	44.7
WP_024688073.1\|1872018_1872201_-	type II toxin-antitoxin system HicA family toxin	A0A0D4DC32	Acinetobacter_phage	5.7e-13	59.3
WP_024688074.1\|1872636_1872960_+\|holin	phage holin, lambda family	A0A1V0DYG4	Shewanella_phage	4.0e-09	37.2
WP_024688075.1\|1872956_1873334_+	hypothetical protein	NA	NA	NA	NA
WP_032622829.1\|1873305_1873485_+	hypothetical protein	NA	NA	NA	NA
WP_024688076.1\|1873620_1873953_+	HNH endonuclease	B5WZZ4	Pseudomonas_phage	6.5e-23	59.5
WP_024688077.1\|1874107_1874596_+\|terminase	terminase	Q3HQS6	Burkholderia_phage	2.1e-25	54.5
WP_024688078.1\|1874596_1876279_+\|terminase	terminase large subunit	Q3HQS7	Burkholderia_phage	3.5e-221	66.4
WP_024688079.1\|1876278_1877709_+\|portal	phage portal protein	A0A0U4IJ43	Pseudomonas_phage	5.6e-204	75.4
WP_024688080.1\|1877711_1878596_+\|protease	Clp protease ClpP	A0A0U4B0J0	Pseudomonas_phage	5.9e-95	64.4
WP_024688081.1\|1878599_1879808_+\|capsid	phage major capsid protein	A0A0U4JIW8	Pseudomonas_phage	3.5e-175	80.5
WP_024688082.1\|1879850_1880108_+	hypothetical protein	K7PHI6	Enterobacteria_phage	3.5e-08	62.2
WP_024688083.1\|1880109_1880451_+\|head,tail	phage gp6-like head-tail connector protein	G3ENA1	Psychrobacter_phage	2.9e-10	31.3
WP_024688084.1\|1880450_1880771_+\|head	phage head closure protein	A0A2D1GNG1	Pseudomonas_phage	3.2e-19	58.0
WP_024688085.1\|1880780_1880960_+	hypothetical protein	NA	NA	NA	NA
WP_024688086.1\|1880961_1881384_+	hypothetical protein	A0A2H4J8D5	uncultured_Caudovirales_phage	2.2e-31	50.0
WP_024688087.1\|1881380_1881767_+	DUF3168 domain-containing protein	A0A2D1GNT4	Pseudomonas_phage	1.4e-32	54.7
WP_024688088.1\|1881823_1882297_+	hypothetical protein	A0A2H4JDL7	uncultured_Caudovirales_phage	3.8e-48	59.9
WP_024688089.1\|1882369_1882741_+	hypothetical protein	A0A2H4JFP4	uncultured_Caudovirales_phage	1.2e-20	51.0

DBSCAN-SWA_4

2506219 : 2514321

uncultured_Caudovirales_phage(85.71%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_024685547.1\|2506219_2507500_+\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	8.2e-98	53.6
WP_024685548.1\|2507500_2508895_+	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA
WP_024685549.1\|2508946_2509945_-	glutathione S-transferase family protein	NA	NA	NA	NA
WP_024685550.1\|2510053_2511055_-	glycosyl transferase family protein	A0A2H4JBY5	uncultured_Caudovirales_phage	1.4e-161	82.3
WP_024685551.1\|2511051_2511387_-	TusE/DsrC/DsvC family sulfur relay protein	A0A2H4J8B6	uncultured_Caudovirales_phage	1.4e-41	74.8
WP_024685552.1\|2511383_2511680_-	sulfurtransferase complex subunit TusB	A0A2H4JG28	uncultured_Caudovirales_phage	8.7e-27	59.6
WP_024685553.1\|2511679_2512042_-	sulfurtransferase complex subunit TusC	A0A2H4J8C0	uncultured_Caudovirales_phage	1.5e-36	65.0
WP_024685554.1\|2512043_2512436_-	sulfurtransferase complex subunit TusD	A0A2H4JA39	uncultured_Caudovirales_phage	1.1e-56	80.0
WP_024685556.1\|2513649_2514321_+	Bax inhibitor-1/YccA family protein	A0A2H4JFM9	uncultured_Caudovirales_phage	2.3e-107	93.3

DBSCAN-SWA_5

2908404 : 2952793

Pseudomonas_phage(42.5%)

tail,capsid,terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_024685049.1\|2908404_2908716_-	hypothetical protein	A0A2H4J7B8	uncultured_Caudovirales_phage	1.4e-38	65.3
WP_080265950.1\|2908766_2909426_-	hypothetical protein	NA	NA	NA	NA
WP_032622545.1\|2909422_2909614_-	hypothetical protein	NA	NA	NA	NA
WP_024685052.1\|2910374_2910575_-	hypothetical protein	NA	NA	NA	NA
WP_024685053.1\|2910635_2911400_-	hypothetical protein	A0A1J0GVP2	Pseudoalteromonas_phage	3.4e-51	47.8
WP_152534983.1\|2911490_2912012_-	hypothetical protein	A0A2H4JAQ1	uncultured_Caudovirales_phage	1.8e-14	51.8
WP_152534984.1\|2912008_2912425_-	DeoR family transcriptional regulator	NA	NA	NA	NA
WP_024685056.1\|2912498_2912960_-	hypothetical protein	A0A2H4J101	uncultured_Caudovirales_phage	1.0e-29	43.1
WP_024685057.1\|2912959_2913253_-	hypothetical protein	NA	NA	NA	NA
WP_080265957.1\|2913249_2913486_-	hypothetical protein	NA	NA	NA	NA
WP_024685059.1\|2913498_2914170_-	3'-5' exonuclease	A0A059VJT9	Pseudomonas_phage	5.3e-96	72.6
WP_032622548.1\|2914166_2915036_-	AAA family ATPase	A0A1B1P9H8	Acinetobacter_phage	1.2e-63	51.6
WP_159372184.1\|2915043_2915187_-	hypothetical protein	NA	NA	NA	NA
WP_024685061.1\|2915339_2915549_-	hypothetical protein	A0A2H4J1S2	uncultured_Caudovirales_phage	1.0e-13	55.6
WP_024685062.1\|2915545_2916091_-	hypothetical protein	A0A218L3S0	Pseudomonas_phage	1.9e-11	33.2
WP_032622539.1\|2916176_2916416_-	hypothetical protein	NA	NA	NA	NA
WP_024685064.1\|2916651_2916948_-	hypothetical protein	NA	NA	NA	NA
WP_024685065.1\|2917604_2917877_-	hypothetical protein	NA	NA	NA	NA
WP_024685066.1\|2917934_2918171_-	hypothetical protein	NA	NA	NA	NA
WP_032622540.1\|2918231_2918453_-	hypothetical protein	A0A2H4J2M2	uncultured_Caudovirales_phage	3.7e-14	50.0
WP_024685067.1\|2918449_2918656_-	hypothetical protein	A0A0U4ISE6	Pseudomonas_phage	3.9e-18	64.7
WP_024685068.1\|2918689_2918974_-	hypothetical protein	NA	NA	NA	NA
WP_024685069.1\|2919879_2920197_+	DUF1654 domain-containing protein	A0A2D1GND3	Pseudomonas_phage	7.1e-27	60.0
WP_159372185.1\|2920231_2920393_-	hypothetical protein	NA	NA	NA	NA
WP_024685070.1\|2920389_2921358_-	hypothetical protein	A9YX09	Burkholderia_phage	2.5e-75	47.6
WP_024685071.1\|2921461_2921701_-	hypothetical protein	NA	NA	NA	NA
WP_024685072.1\|2921742_2922573_-	helix-turn-helix domain-containing protein	H2BD63	Pseudomonas_phage	6.4e-51	44.4
WP_024685073.1\|2922662_2922872_+	hypothetical protein	A0A1B0Z2M2	Pseudomonas_phage	1.1e-15	66.7
WP_024685074.1\|2922901_2923129_+	hypothetical protein	W6MW47	Pseudomonas_phage	1.7e-14	61.2
WP_050586925.1\|2923136_2923373_+	hypothetical protein	A0A2H4IZI7	uncultured_Caudovirales_phage	1.3e-09	50.0
WP_152534985.1\|2923386_2923743_+	hypothetical protein	NA	NA	NA	NA
WP_024685077.1\|2923921_2924725_+	hypothetical protein	A0A2H4J5H6	uncultured_Caudovirales_phage	7.6e-33	36.4
WP_024685078.1\|2924721_2924952_+	hypothetical protein	NA	NA	NA	NA
WP_024685079.1\|2924951_2925734_+	hypothetical protein	A0A059VF77	Pseudomonas_phage	2.3e-103	71.2
WP_024685080.1\|2925723_2926530_+	ATP-binding protein	A0A2H4J3E5	uncultured_Caudovirales_phage	7.3e-84	57.7
WP_024685081.1\|2926618_2926819_+	hypothetical protein	NA	NA	NA	NA
WP_024685082.1\|2926815_2927205_+	hypothetical protein	NA	NA	NA	NA
WP_024685083.1\|2927197_2927614_+	NinB family protein	A0A2H4JA22	uncultured_Caudovirales_phage	1.1e-62	80.4
WP_024685084.1\|2927610_2928234_+	bacteriophage lambda NinG family protein	A0A2H4JA27	uncultured_Caudovirales_phage	1.1e-66	66.5
WP_152534986.1\|2928218_2928851_+	hypothetical protein	A0A2I7RQG7	Vibrio_phage	5.9e-49	47.2
WP_024685086.1\|2928932_2929478_+	hypothetical protein	A0A0H5AWB8	Pseudomonas_phage	1.9e-59	62.5
WP_050586927.1\|2929461_2929980_+	HNH endonuclease	A0A1W6DY33	Salmonella_phage	7.5e-34	47.2
WP_152534988.1\|2930136_2930433_+	hypothetical protein	NA	NA	NA	NA
WP_024685089.1\|2930839_2931091_+	hypothetical protein	NA	NA	NA	NA
WP_024685090.1\|2931124_2931541_+	hypothetical protein	NA	NA	NA	NA
WP_024685091.1\|2931533_2931923_+	hypothetical protein	NA	NA	NA	NA
WP_024685092.1\|2932104_2932347_+	hypothetical protein	NA	NA	NA	NA
WP_024685093.1\|2932417_2932600_+	DUF2158 domain-containing protein	NA	NA	NA	NA
WP_024683715.1\|2932647_2933265_+	hypothetical protein	G8C7P2	Escherichia_phage	2.7e-38	47.8
WP_024685094.1\|2933267_2934755_+\|terminase	terminase	A0A2H4J2I1	uncultured_Caudovirales_phage	7.2e-271	90.9
WP_024685095.1\|2934762_2936202_+	DUF4055 domain-containing protein	A0A2H4J5M6	uncultured_Caudovirales_phage	3.2e-74	37.4
WP_024685096.1\|2936191_2937238_+\|capsid	minor capsid protein	A0A2H4J3G9	uncultured_Caudovirales_phage	3.2e-39	34.0
WP_024685097.1\|2937355_2938066_+	hypothetical protein	A0A2H4J0Y0	uncultured_Caudovirales_phage	2.1e-34	56.3
WP_024685098.1\|2938078_2939047_+	hypothetical protein	R9TJ64	Synechococcus_phage	4.3e-115	66.7
WP_024685099.1\|2939096_2939672_+	hypothetical protein	NA	NA	NA	NA
WP_024685100.1\|2939711_2940101_+	hypothetical protein	A0A0S2SYB7	Pseudomonas_phage	4.1e-16	47.1
WP_024685101.1\|2940104_2940464_+	hypothetical protein	A0A0S2SYG4	Pseudomonas_phage	1.4e-18	46.6
WP_024685102.1\|2940463_2940850_+	HK97 gp10 family phage protein	A0A059VF88	Pseudomonas_phage	6.6e-35	56.7
WP_024685103.1\|2940846_2941269_+	hypothetical protein	A0A059VK45	Pseudomonas_phage	7.2e-59	79.3
WP_024685104.1\|2941335_2942499_+	Ig-like domain-containing protein	A0A059VG08	Pseudomonas_phage	2.7e-124	73.3
WP_024685105.1\|2942576_2943044_+	hypothetical protein	NA	NA	NA	NA
WP_024685106.1\|2943061_2943304_+	hypothetical protein	A0A059VJS3	Pseudomonas_phage	2.1e-23	65.0
WP_024685107.1\|2943353_2943803_-	Arc family DNA-binding protein	A0A0H5AWD9	Pseudomonas_phage	9.5e-09	37.4
WP_080265953.1\|2943866_2944019_+	Arc family DNA-binding protein	NA	NA	NA	NA
WP_024685108.1\|2944086_2945049_+	hypothetical protein	A0A2H4JG39	uncultured_Caudovirales_phage	4.3e-91	55.1
WP_080265954.1\|2945045_2946143_+	DNA-binding protein	A0A2H4IZE1	uncultured_Caudovirales_phage	6.8e-117	78.0
WP_024685109.1\|2946239_2946581_+	hypothetical protein	NA	NA	NA	NA
WP_159372186.1\|2946637_2952793_+\|tail	phage tail tape measure protein	A0A059VJZ1	Pseudomonas_phage	2.0e-125	35.1

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP047266

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP047265

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection