CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NC_022075	Bacillus velezensis UCMB5033, complete genome	0 crisprs	csa3,DinG,casR,cas3,DEDDh	0	0	10	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

638929 : 655134

uncultured_Caudovirales_phage(44.44%)

integrase,holin

attL 640872:640890|attR 655341:655359

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003155970.1\|638929_639214_+	co-chaperone GroES	A0A221S3C8	uncultured_virus	2.2e-19	51.6
WP_003155941.1\|639255_640890_+	chaperonin GroEL	A0A219YK78	uncultured_virus	3.7e-159	57.5
640872:640890	attL	NA	NA	NA	NA
WP_003155938.1\|640980_642177_-\|integrase	site-specific integrase	S6C485	Thermus_phage	3.5e-82	44.6
WP_020953911.1\|642203_642677_-	ImmA/IrrE family metallo-endopeptidase	A0A2H4JA43	uncultured_Caudovirales_phage	2.3e-21	34.5
WP_013351188.1\|642868_643216_-	DUF4064 domain-containing protein	A0A0S2MVJ2	Bacillus_phage	5.1e-18	67.1
WP_020953912.1\|643229_643751_-	hypothetical protein	NA	NA	NA	NA
WP_014471489.1\|644018_644399_-	helix-turn-helix domain-containing protein	A0A0U4KKM4	Exiguobacterium_phage	1.9e-10	39.7
WP_020953913.1\|644532_644775_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_014471490.1\|644817_644997_+	hypothetical protein	NA	NA	NA	NA
WP_003155923.1\|644980_645226_-	hypothetical protein	X2KU02	Streptococcus_phage	1.1e-22	61.3
WP_014471492.1\|645306_645621_+	hypothetical protein	A0A2H4JDL0	uncultured_Caudovirales_phage	3.6e-15	48.9
WP_003155918.1\|645617_646388_+	phage antirepressor Ant	A0A290FZK7	Caldibacillus_phage	8.5e-74	68.5
WP_003155916.1\|646497_647070_+	helix-turn-helix transcriptional regulator	A0A2H4J884	uncultured_Caudovirales_phage	1.3e-58	55.0
WP_013351192.1\|647066_647324_+	hypothetical protein	A0A2H4J4M9	uncultured_Caudovirales_phage	3.5e-08	40.5
WP_013351193.1\|647320_647518_+	hypothetical protein	NA	NA	NA	NA
WP_041482285.1\|647619_647805_+	hypothetical protein	NA	NA	NA	NA
WP_014471495.1\|647804_648755_+	YqaJ viral recombinase family protein	A0A2H4JA52	uncultured_Caudovirales_phage	2.8e-135	73.0
WP_013351197.1\|648757_649597_+	recombinase RecT	A0A2H4JCY8	uncultured_Caudovirales_phage	1.8e-122	80.9
WP_014471497.1\|649761_650478_+	DnaD domain protein	A0A2H4J6G9	uncultured_Caudovirales_phage	2.1e-42	44.5
WP_007408580.1\|651500_651788_+	hypothetical protein	NA	NA	NA	NA
WP_020953915.1\|651806_651974_+	XkdX family protein	NA	NA	NA	NA
WP_020953916.1\|651987_652209_+	hypothetical protein	NA	NA	NA	NA
WP_003155834.1\|652243_652666_+\|holin	phage holin family protein	D6R405	Bacillus_phage	9.4e-59	88.0
WP_020953917.1\|652713_653685_+	N-acetylmuramoyl-L-alanine amidase	A0A218KC88	Bacillus_phage	8.5e-63	62.9
WP_020953919.1\|653837_654797_+	NYN domain-containing protein	A0A0K2CNZ2	Brevibacillus_phage	5.6e-83	55.3
WP_041482286.1\|654942_655134_-	hypothetical protein	A0A2H4J4T3	uncultured_Caudovirales_phage	2.0e-16	66.1
655341:655359	attR	NA	NA	NA	NA

DBSCAN-SWA_2

697302 : 707193

Synechococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_007408896.1\|697302_698595_+	adenylosuccinate lyase	A0A2H4UUU6	Bodo_saltans_virus	4.5e-19	27.3
WP_007408897.1\|698670_699390_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A0E3G7P8	Synechococcus_phage	5.7e-48	44.7
WP_003155758.1\|699389_699644_+	phosphoribosylformylglycinamidine synthase subunit PurS	M4QPE7	Synechococcus_phage	4.7e-05	33.3
WP_007408898.1\|699640_700324_+	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA
WP_007408899.1\|700307_702536_+	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	5.5e-158	40.7
WP_007408900.1\|702511_703942_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	6.2e-54	32.7
WP_007408901.1\|704033_705074_+	phosphoribosylformylglycinamidine cyclo-ligase	A0A0E3F760	Synechococcus_phage	6.3e-64	41.4
WP_007408902.1\|705070_705658_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	1.3e-26	38.8
WP_007408903.1\|705654_707193_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	Q58MG4	Prochlorococcus_phage	2.5e-77	50.5

DBSCAN-SWA_3

1236439 : 1268214

Bacillus_phage(32.26%)

plate,holin,tail,capsid,terminase,portal

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_087920760.1\|1236439_1237576_+	S9 family peptidase	A0A1P8CWN8	Bacillus_phage	1.3e-94	47.9
WP_003154881.1\|1237565_1237700_+	PhrA family phosphatase inhibitor	NA	NA	NA	NA
WP_020953976.1\|1237842_1238796_+	N-acetylmuramoyl-L-alanine amidase	A0A218KC88	Bacillus_phage	1.1e-62	69.3
WP_007610770.1\|1238833_1239211_-	PH domain-containing protein	A5GYQ0	Lactococcus_phage	1.5e-15	41.4
WP_007407288.1\|1239320_1239926_+	poly-gamma-glutamate hydrolase family protein	A0A0Y0AJU6	Bacillus_phage	1.4e-42	48.3
WP_007407287.1\|1239915_1240086_+	hypothetical protein	NA	NA	NA	NA
WP_007407286.1\|1240082_1240673_-	ImmA/IrrE family metallo-endopeptidase	A0A2H4JA43	uncultured_Caudovirales_phage	1.4e-39	52.3
WP_003154871.1\|1240821_1241160_-	helix-turn-helix transcriptional regulator	A0A2H4J6F9	uncultured_Caudovirales_phage	8.4e-18	45.8
WP_007407285.1\|1241350_1241530_+	hypothetical protein	NA	NA	NA	NA
WP_007407284.1\|1241519_1242347_+	hypothetical protein	S6BFM4	Thermus_phage	2.2e-19	49.0
WP_007407283.1\|1242246_1243047_+	ATP-binding protein	A6XMI1	Bacillus_virus	5.2e-58	45.3
WP_003154863.1\|1243046_1243214_+	hypothetical protein	NA	NA	NA	NA
WP_007407281.1\|1243311_1243653_+	hypothetical protein	NA	NA	NA	NA
WP_007407280.1\|1243642_1243846_+	hypothetical protein	A0A2H4J4M6	uncultured_Caudovirales_phage	1.9e-12	50.0
WP_007407279.1\|1243959_1244472_+	sigma-70 family RNA polymerase sigma factor	A0A0K2CNQ1	Brevibacillus_phage	3.8e-22	44.6
WP_007407278.1\|1244584_1245382_+\|terminase	terminase small subunit	A0A0S2MVB6	Bacillus_phage	4.0e-58	49.8
WP_007407277.1\|1245378_1246677_+\|terminase	PBSX family phage terminase large subunit	M4ZRM5	Bacillus_phage	2.1e-149	58.9
WP_106080344.1\|1246725_1248111_+\|portal	phage portal protein	A0A1B1P7C8	Bacillus_phage	1.1e-137	55.6
WP_007407275.1\|1248136_1248982_+\|portal	phage portal protein	A0A1B1P7E4	Bacillus_phage	2.5e-55	58.1
WP_007407274.1\|1249008_1249944_+\|capsid	phage major capsid protein	A0A1B1P7E3	Bacillus_phage	3.3e-104	62.8
WP_007407273.1\|1249960_1250344_+	DUF3199 family protein	NA	NA	NA	NA
WP_007407272.1\|1250340_1250697_+	DUF3599 family protein	NA	NA	NA	NA
WP_007407271.1\|1250693_1251197_+	HK97 gp10 family phage protein	A0A249XXA4	Clostridium_phage	1.3e-35	40.5
WP_007407270.1\|1251193_1251640_+	hypothetical protein	NA	NA	NA	NA
WP_007407269.1\|1251636_1251846_+	hypothetical protein	NA	NA	NA	NA
WP_007407268.1\|1251845_1253243_+\|tail	phage tail sheath subtilisin-like domain-containing protein	A0A0A7RTT5	Clostridium_phage	2.0e-81	40.4
WP_003154837.1\|1253244_1253688_+\|tail	phage tail tube protein	A0A0K2CNG3	Brevibacillus_phage	8.4e-26	45.2
WP_003154836.1\|1253764_1254211_+\|portal	phage portal protein	A0A0A7RTY8	Clostridium_phage	1.0e-10	35.8
WP_015239684.1\|1254252_1254405_+	hypothetical protein	NA	NA	NA	NA
WP_020953977.1\|1254392_1259393_+	transglycosylase SLT domain-containing protein	A0A1L2JY60	Aeribacillus_phage	1.5e-41	47.0
WP_007407266.1\|1259385_1260045_+	LysM peptidoglycan-binding domain-containing protein	G3MBQ1	Bacillus_virus	1.4e-08	45.3
WP_007407265.1\|1260058_1261036_+	hypothetical protein	A0A1L6BY20	Clostridium_phage	6.4e-34	30.9
WP_007407264.1\|1261035_1261302_+	DUF2577 family protein	S6C459	Thermus_phage	1.3e-05	37.5
WP_003154825.1\|1261405_1261831_+	DUF2634 domain-containing protein	A0A2H4J6K5	uncultured_Caudovirales_phage	1.5e-11	35.9
WP_007407263.1\|1261823_1262870_+\|plate	baseplate J/gp47 family protein	S6AVU3	Thermus_phage	1.3e-69	44.1
WP_007407262.1\|1262853_1263432_+	YmfQ family protein	A0A2H4J717	uncultured_Caudovirales_phage	3.1e-12	31.0
WP_003154822.1\|1263428_1263701_+	hypothetical protein	NA	NA	NA	NA
WP_007407261.1\|1263703_1265326_+	hypothetical protein	A0A1P8CWR7	Bacillus_phage	1.4e-41	39.7
WP_007407260.1\|1265338_1265710_+	hypothetical protein	NA	NA	NA	NA
WP_007407259.1\|1265714_1265912_+	XkdX family protein	A0A2H4JAA1	uncultured_Caudovirales_phage	7.3e-14	61.8
WP_007407258.1\|1265968_1266730_+	hypothetical protein	NA	NA	NA	NA
WP_003154815.1\|1266781_1267045_+	hemolysin XhlA family protein	A0A2H4JD40	uncultured_Caudovirales_phage	8.8e-23	63.1
WP_003154813.1\|1267058_1267322_+\|holin	phage holin	A0A2H4J6M0	uncultured_Caudovirales_phage	2.3e-23	65.5
WP_007407257.1\|1267335_1268214_+	N-acetylmuramoyl-L-alanine amidase	Q9ZXD7	Bacillus_phage	3.7e-81	60.5

DBSCAN-SWA_4

1823697 : 1829909

Bacillus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003154061.1\|1823697_1824090_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	G3MBF1	Bacillus_virus	3.8e-30	59.1
WP_007410373.1\|1824049_1826152_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	U5PY35	Bacillus_phage	0.0e+00	85.7
WP_007410372.1\|1826169_1827159_+	class 1b ribonucleoside-diphosphate reductase subunit beta	F8WQ21	Bacillus_phage	6.2e-154	82.1
WP_007410371.1\|1827207_1827828_+	hypothetical protein	A0A127AYS1	Bacillus_phage	2.7e-46	47.4
WP_007410370.1\|1827875_1828634_-	N-acetylmuramoyl-L-alanine amidase	E5DV68	Deep-sea_thermophilic_phage	1.1e-52	50.4
WP_015417523.1\|1828940_1829909_+	stage V sporulation protein K	G3MAX6	Bacillus_virus	8.0e-53	40.9

DBSCAN-SWA_5

2104991 : 2116249

Bacillus_phage(90.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003153663.1\|2104991_2105417_+	SDR family NAD(P)-dependent oxidoreductase	A0A1V0SAI8	Catovirus	2.7e-13	35.6
WP_007407925.1\|2105450_2105627_-	hypothetical protein	O64196	Bacillus_phage	5.0e-22	91.4
WP_007407924.1\|2105629_2105836_-	hypothetical protein	O64195	Bacillus_phage	1.1e-15	73.3
WP_007407923.1\|2105994_2106348_-	DUF3221 domain-containing protein	NA	NA	NA	NA
WP_007407922.1\|2106797_2107034_+	hypothetical protein	NA	NA	NA	NA
WP_007407921.1\|2107159_2107534_+	hypothetical protein	A0A1P8CWZ2	Bacillus_phage	1.2e-28	51.2
WP_007407920.1\|2107767_2108220_-	hypothetical protein	O64117	Bacillus_phage	3.7e-61	76.7
WP_007407919.1\|2108598_2109714_+	tetratricopeptide repeat protein	D6R410	Bacillus_phage	4.1e-93	48.1
WP_016936664.1\|2109710_2109833_+	phosphatase RapK inhibitor PhrK	NA	NA	NA	NA
WP_007407917.1\|2110314_2110911_-	SMI1/KNR4 family protein	O64025	Bacillus_phage	2.6e-86	83.0
WP_020954045.1\|2110912_2112664_-	HNH endonuclease	A0A1P8CWI7	Bacillus_phage	1.5e-235	68.7
WP_096335157.1\|2112700_2113135_-	SMI1/KNR4 family protein	NA	NA	NA	NA
WP_007409540.1\|2113399_2114365_+	thermonuclease family protein	A0A1P8CWK6	Bacillus_phage	4.9e-79	75.4
WP_020954046.1\|2114581_2116249_+	recombinase family protein	O64015	Bacillus_phage	1.6e-274	90.8

DBSCAN-SWA_6

2150933 : 2209593

Bacillus_phage(92.19%)

integrase

attL 2166539:2166557|attR 2211099:2211117

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_041482291.1\|2150933_2151488_-	Holliday junction resolvase RecU	O64195	Bacillus_phage	3.6e-90	91.0
WP_014470254.1\|2151585_2151825_+	helix-turn-helix transcriptional regulator	A0A1P8CX60	Bacillus_phage	6.5e-25	65.8
WP_157870247.1\|2151814_2152000_-	hypothetical protein	O64193	Bacillus_phage	4.9e-20	82.8
WP_020954052.1\|2152113_2152563_-	hypothetical protein	A0A1P8CX70	Bacillus_phage	7.1e-73	90.5
WP_020954054.1\|2152611_2153043_-	hypothetical protein	NA	NA	NA	NA
WP_020954055.1\|2153029_2153305_-	hypothetical protein	X2JIK4	Bacillus_phage	2.4e-07	54.0
WP_020954057.1\|2153473_2153890_-	hypothetical protein	A0A1P8CX53	Bacillus_phage	2.0e-37	74.3
WP_157870238.1\|2153864_2154278_-	hypothetical protein	NA	NA	NA	NA
WP_020954059.1\|2154315_2154477_-	hypothetical protein	NA	NA	NA	NA
WP_041482292.1\|2154524_2154755_-	hypothetical protein	NA	NA	NA	NA
WP_020954060.1\|2154855_2155074_+	alpha/beta-type small acid-soluble spore protein	Q77YX0	Bacillus_phage	1.3e-27	90.3
WP_041482293.1\|2155154_2155343_-	hypothetical protein	A0A1P8CX75	Bacillus_phage	1.5e-21	87.1
WP_041482294.1\|2155501_2155684_-	hypothetical protein	A0A1P8CX65	Bacillus_phage	5.5e-16	79.2
WP_020954061.1\|2155680_2156403_-	hypothetical protein	A0A1P8CX46	Bacillus_phage	3.6e-82	66.7
WP_020954062.1\|2156390_2156747_-	hypothetical protein	NA	NA	NA	NA
WP_020954063.1\|2156806_2157172_-	hypothetical protein	NA	NA	NA	NA
WP_020954064.1\|2157300_2157807_-	dihydrofolate reductase	A0A0H3UYW4	Geobacillus_virus	9.6e-34	39.8
WP_020954065.1\|2157806_2158646_-	thymidylate synthase	A0A1P8CX42	Bacillus_phage	1.5e-153	91.4
WP_041482295.1\|2158716_2159343_+	DUF1643 domain-containing protein	NA	NA	NA	NA
WP_020954066.1\|2159781_2160081_-	hypothetical protein	A0A1P8CX63	Bacillus_phage	6.7e-19	51.1
WP_020954067.1\|2160073_2160340_-	hypothetical protein	NA	NA	NA	NA
WP_020954069.1\|2160772_2161201_-	dUTP diphosphatase	A0A1P8CX51	Bacillus_phage	2.6e-72	90.1
WP_020954071.1\|2162306_2162828_-	HNH endonuclease	A0A1P8CX39	Bacillus_phage	4.5e-79	84.4
WP_157870251.1\|2165660_2166338_-	ribonucleotide-diphosphate reductase subunit alpha	A0A1P8CX40	Bacillus_phage	2.4e-120	96.4
WP_020954073.1\|2166345_2166741_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	A0A1P8CX56	Bacillus_phage	1.1e-56	84.0
2166539:2166557	attL	NA	NA	NA	NA
WP_020954074.1\|2166737_2167088_-	hypothetical protein	O64171	Bacillus_phage	1.2e-22	46.7
WP_020954075.1\|2167106_2167256_-	hypothetical protein	NA	NA	NA	NA
WP_020954076.1\|2167286_2167646_-	hypothetical protein	NA	NA	NA	NA
WP_020954077.1\|2167669_2167978_-	hypothetical protein	NA	NA	NA	NA
WP_051195853.1\|2168043_2168271_-	DUF1653 domain-containing protein	A0A1P8CX21	Bacillus_phage	1.4e-29	82.6
WP_020954079.1\|2168305_2168524_-	hypothetical protein	NA	NA	NA	NA
WP_041482298.1\|2168633_2169131_-	adenine methyltransferase	S5MUL8	Brevibacillus_phage	4.2e-50	56.3
WP_020954081.1\|2169171_2169594_-	hypothetical protein	A0A1P8CX27	Bacillus_phage	9.8e-40	61.5
WP_041482299.1\|2169594_2170044_-	hypothetical protein	NA	NA	NA	NA
WP_020954083.1\|2170060_2170240_-	hypothetical protein	NA	NA	NA	NA
WP_020954084.1\|2170302_2170641_-	hypothetical protein	S5MS56	Bacillus_phage	2.9e-18	51.8
WP_041482300.1\|2170733_2171285_-	metallophosphoesterase	A0A223LD99	Bacillus_phage	6.7e-57	60.7
WP_020954085.1\|2171833_2172595_-	hypothetical protein	NA	NA	NA	NA
WP_020954086.1\|2172782_2172980_-	hypothetical protein	NA	NA	NA	NA
WP_020954088.1\|2173259_2173478_-	hypothetical protein	O64155	Bacillus_phage	6.2e-14	57.1
WP_041482302.1\|2173579_2174782_-	hypothetical protein	NA	NA	NA	NA
WP_020954090.1\|2174853_2175810_-	site-specific DNA-methyltransferase	A7IVN5	Paramecium_bursaria_Chlorella_virus	3.5e-37	33.7
WP_020954091.1\|2175867_2176365_-	nucleotide kinase; phage SPbeta	A0A1P8CX28	Bacillus_phage	5.1e-64	71.3
WP_020954092.1\|2176361_2176520_-	hypothetical protein	A0A1P8CX36	Bacillus_phage	1.9e-12	64.7
WP_014417936.1\|2176524_2176728_-	YorP family protein	O64150	Bacillus_phage	1.0e-26	80.6
WP_020954093.1\|2176739_2177447_-	3D domain-containing protein	O64147	Bacillus_phage	4.3e-24	33.0
WP_020954094.1\|2178888_2179659_-	HNH endonuclease	A0A1W6JN34	Lactococcus_phage	6.0e-19	39.8
WP_020954095.1\|2182413_2184141_-	single-stranded-DNA-specific exonuclease RecJ	A0A1P8CX07	Bacillus_phage	3.4e-272	80.7
WP_020954096.1\|2184140_2185277_-	DNA replication initiation protein; phage SPbeta	A0A1P8CX05	Bacillus_phage	2.5e-207	90.7
WP_020954097.1\|2185292_2186807_-	replicative DNA helicase; phage SPbeta	A0A1P8CWZ7	Bacillus_phage	6.0e-273	94.4
WP_020954098.1\|2186821_2187292_-	hypothetical protein	A0A1P8CX08	Bacillus_phage	1.7e-80	89.7
WP_020954099.1\|2187333_2188305_-	ATP-binding protein	A0A1P8CX29	Bacillus_phage	2.4e-174	96.3
WP_020954100.1\|2188393_2189308_-	hypothetical protein	A0A1P8CX09	Bacillus_phage	2.1e-156	90.8
WP_020954101.1\|2189336_2189711_-	hypothetical protein	A0A1P8CX10	Bacillus_phage	3.1e-53	78.2
WP_020954103.1\|2190216_2190594_-	hypothetical protein	A0A1P8CX06	Bacillus_phage	3.4e-52	77.0
WP_020954104.1\|2190632_2192375_-	right-handed parallel beta-helix repeat-containing protein	O64135	Bacillus_phage	2.3e-220	63.6
WP_020954105.1\|2192371_2193196_-	poly-gamma-glutamate hydrolase family protein	O64134	Bacillus_phage	1.7e-83	60.8
WP_020954106.1\|2193370_2193547_+	hypothetical protein	NA	NA	NA	NA
WP_020954107.1\|2193578_2193851_-	hypothetical protein	A0A1P8CWZ5	Bacillus_phage	4.7e-35	78.9
WP_020954108.1\|2193840_2194728_-	hypothetical protein	A0A1P8CWZ3	Bacillus_phage	1.2e-159	93.6
WP_020954110.1\|2195023_2195698_+	SOS response-associated peptidase	A0A1P8CX02	Bacillus_phage	1.1e-77	97.2
WP_020954111.1\|2195767_2196580_+	bacteriophage SPbeta DNA ligase	O64130	Bacillus_phage	9.4e-140	88.9
WP_014470184.1\|2196797_2196995_-	hypothetical protein	NA	NA	NA	NA
WP_020954112.1\|2197864_2198227_-	hypothetical protein	A0A140HLN5	Bacillus_phage	6.4e-32	48.4
WP_020954113.1\|2198263_2198779_-	hypothetical protein	A0A1Z1DA37	Bacillus_phage	4.5e-47	55.1
WP_020954114.1\|2199076_2199241_-	hypothetical protein	NA	NA	NA	NA
WP_020954115.1\|2199356_2199731_+	hypothetical protein	A0A1P8CWZ2	Bacillus_phage	4.0e-37	63.4
WP_157870239.1\|2199744_2199975_-	hypothetical protein	O64123	Bacillus_phage	3.8e-30	94.4
WP_020954117.1\|2200133_2200316_-	hypothetical protein	NA	NA	NA	NA
WP_020954118.1\|2200347_2200740_-	hypothetical protein	A0A0A8WEI8	Clostridium_phage	2.4e-24	44.6
WP_020954119.1\|2200772_2200967_-	hypothetical protein	NA	NA	NA	NA
WP_020954120.1\|2201011_2201314_-	hypothetical protein	NA	NA	NA	NA
WP_020954121.1\|2201344_2201581_-	hypothetical protein	NA	NA	NA	NA
WP_041482306.1\|2201711_2202011_-	hypothetical protein	A0A143FIJ2	Bacillus_phage	1.1e-08	37.5
WP_020954123.1\|2202070_2202478_-	hypothetical protein	A0A1P8CWY3	Bacillus_phage	4.6e-71	94.8
WP_020954124.1\|2202484_2202823_-	hypothetical protein	O64111	Bacillus_phage	9.9e-43	77.7
WP_020954125.1\|2202819_2203125_-	hypothetical protein	NA	NA	NA	NA
WP_020954126.1\|2203121_2203313_-	hypothetical protein	R4JF30	Bacillus_phage	6.4e-23	77.8
WP_157870241.1\|2203309_2203537_-	hypothetical protein	NA	NA	NA	NA
WP_020954127.1\|2203569_2203794_-	hypothetical protein	A0A1P8CWW8	Bacillus_phage	7.5e-15	51.9
WP_020954128.1\|2203902_2204148_-	hypothetical protein	A0A1P8CWW5	Bacillus_phage	5.7e-16	52.0
WP_020954129.1\|2204222_2204522_-	hypothetical protein	A0A1P8CWX3	Bacillus_phage	1.0e-19	50.0
WP_021493552.1\|2204687_2204909_+	helix-turn-helix transcriptional regulator	A0A1P8CWW6	Bacillus_phage	2.2e-27	79.5
WP_020954130.1\|2205129_2206113_-	hypothetical protein	A0A1P8CWX4	Bacillus_phage	9.6e-139	77.4
WP_020954131.1\|2206133_2207483_-	hypothetical protein	A0A1P8CWX1	Bacillus_phage	2.5e-190	75.7
WP_020954132.1\|2207559_2208618_-\|integrase	tyrosine-type recombinase/integrase	A0A1P8CWW9	Bacillus_phage	8.7e-154	75.7
WP_020954133.1\|2208627_2208792_-	hypothetical protein	A0A1P8CWX2	Bacillus_phage	1.4e-05	55.3
WP_014471999.1\|2208830_2209061_-	hypothetical protein	A0A1P8CWW1	Bacillus_phage	5.5e-21	72.3
WP_014472000.1\|2209075_2209288_-	hypothetical protein	A0A1P8CWW7	Bacillus_phage	1.6e-22	78.5
WP_020954135.1\|2209437_2209593_-	hypothetical protein	A0A1P8CWW2	Bacillus_phage	8.5e-10	60.8
2211099:2211117	attR	NA	NA	NA	NA

DBSCAN-SWA_7

2250279 : 2282017

Bacillus_phage(95.65%)

integrase,holin,tail

attL 2245784:2245800|attR 2287684:2287700

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2245784:2245800	attL	NA	NA	NA	NA
WP_020954178.1\|2250279_2250945_+	hypothetical protein	A0A1P8CWR8	Bacillus_phage	3.1e-48	50.5
WP_041482315.1\|2250941_2251448_+	hypothetical protein	O64060	Bacillus_phage	1.5e-63	68.5
WP_020954179.1\|2251444_2252173_+	hypothetical protein	A0A1P8CWQ7	Bacillus_phage	1.0e-28	34.1
WP_020954180.1\|2252207_2253002_+	hypothetical protein	A0A1P8CWR0	Bacillus_phage	9.8e-17	34.9
WP_020954181.1\|2253022_2253490_+	hypothetical protein	NA	NA	NA	NA
WP_022553073.1\|2253561_2253918_+	hypothetical protein	O64055	Bacillus_phage	8.2e-48	79.7
WP_020954183.1\|2253917_2255252_+	hypothetical protein	A0A1P8CWR7	Bacillus_phage	1.1e-25	34.2
WP_077210008.1\|2255585_2255780_+	XkdX family protein	A0A1P8CWR4	Bacillus_phage	1.3e-10	61.1
WP_020954185.1\|2255860_2256346_+	hypothetical protein	A0A1P8CWQ6	Bacillus_phage	1.8e-53	65.2
WP_020954186.1\|2256345_2256762_+	hypothetical protein	A0A1P8CWQ4	Bacillus_phage	2.4e-46	66.9
WP_014472041.1\|2256775_2257777_+\|integrase	site-specific integrase	A0A1P8CWP6	Bacillus_phage	2.2e-170	86.7
WP_041482338.1\|2257821_2258037_+	hypothetical protein	NA	NA	NA	NA
WP_020954189.1\|2258647_2259274_+	hypothetical protein	A0A0H3UZD5	Geobacillus_virus	1.1e-23	33.7
WP_157870243.1\|2259320_2260979_+\|tail	phage tail tape measure protein	A0A1P8CWQ1	Bacillus_phage	1.9e-203	81.8
WP_082187179.1\|2261093_2266418_+\|tail	phage tail tape measure protein	A0A1P8CWQ1	Bacillus_phage	0.0e+00	75.0
WP_020954190.1\|2266475_2267234_+\|tail	phage tail family protein	O64045	Bacillus_phage	1.9e-126	84.5
WP_020954192.1\|2270548_2271364_+	hypothetical protein	A0A1P8CWP7	Bacillus_phage	9.2e-95	63.2
WP_041482342.1\|2271407_2273960_+	Pre-neck appendage protein	D6R401	Bacillus_phage	8.9e-136	35.5
WP_020954194.1\|2274408_2275455_+	N-acetylmuramoyl-L-alanine amidase	A0A1J0MS59	Bacillus_phage	2.7e-78	50.5
WP_014417852.1\|2275569_2275962_+	hypothetical protein	A0A1P8CWP1	Bacillus_phage	7.1e-61	97.7
WP_020954195.1\|2275982_2276234_+\|holin	phage holin	A0A1P8CWN5	Bacillus_phage	1.5e-32	85.5
WP_041482343.1\|2276591_2276852_+	collagen-like protein	NA	NA	NA	NA
WP_020954197.1\|2277003_2278164_+	tetratricopeptide repeat protein	A0A1P8CWN8	Bacillus_phage	1.3e-33	26.5
WP_020954198.1\|2278327_2279578_-	lesion bypass phage DNA polymerase	O64031	Bacillus_phage	2.8e-223	91.6
WP_020954199.1\|2279570_2279903_-	YolD-like family protein	A0A1P8CWP2	Bacillus_phage	1.4e-41	74.5
WP_020954200.1\|2280121_2280895_-	sporulation protein YunB	NA	NA	NA	NA
WP_076982784.1\|2281149_2281239_+\|holin	putative holin-like toxin	NA	NA	NA	NA
WP_082187182.1\|2281534_2282017_-	SMI1/KNR4 family protein	A0A1P8CWM6	Bacillus_phage	2.2e-59	66.9
2287684:2287700	attR	NA	NA	NA	NA

DBSCAN-SWA_8

2389351 : 2395605

Staphylococcus_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_007409428.1\|2389351_2389945_-	SMC-Scp complex subunit ScpB	A0A1B1IVT7	uncultured_Mediterranean_phage	2.6e-14	36.6
WP_007409427.1\|2389934_2390690_-	segregation/condensation protein A	A0A1B1IVW1	uncultured_Mediterranean_phage	2.9e-10	25.7
WP_003153376.1\|2390897_2390987_+	YjcZ family sporulation protein	NA	NA	NA	NA
WP_003153375.1\|2391075_2391597_+	DUF309 domain-containing protein	NA	NA	NA	NA
WP_003153373.1\|2391662_2392037_-	GNAT family N-acetyltransferase RibT	NA	NA	NA	NA
WP_003153372.1\|2392153_2392618_-	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	1.2e-43	59.3
WP_007409426.1\|2392650_2393847_-	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	A0A2H4PQS2	Staphylococcus_phage	2.1e-116	54.9
WP_007409425.1\|2393861_2394509_-	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	1.5e-39	44.3
WP_007409424.1\|2394489_2395605_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A2H4PQS8	Staphylococcus_phage	2.6e-55	36.9

DBSCAN-SWA_9

2747810 : 2807667

uncultured_Mediterranean_phage(25.0%)

tRNA,protease,coat

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_007408194.1\|2747810_2748254_-\|tRNA	D-tyrosyl-tRNA(Tyr) deacylase	NA	NA	NA	NA
WP_003152716.1\|2748268_2750473_-	GTP diphosphokinase	A0A2I2L310	Orpheovirus	1.5e-09	34.8
WP_003152714.1\|2750630_2751143_-	adenine phosphoribosyltransferase	A0A1V0SKE5	Klosneuvirus	5.5e-29	47.2
WP_007408193.1\|2751148_2753509_-	single-stranded-DNA-specific exonuclease RecJ	A7KV88	Bacillus_phage	3.6e-91	34.8
WP_007408192.1\|2753564_2753891_-	DUF1049 domain-containing protein	NA	NA	NA	NA
WP_012118088.1\|2753954_2754452_-	cation:proton antiporter regulatory subunit	NA	NA	NA	NA
WP_007408190.1\|2754583_2756803_-	protein translocase subunit SecDF	A0A1B1IVP7	uncultured_Mediterranean_phage	1.6e-27	32.1
WP_007408189.1\|2756839_2757136_-	post-transcriptional regulator	NA	NA	NA	NA
WP_007408188.1\|2757251_2758808_+	stage V sporulation protein B	NA	NA	NA	NA
WP_003152699.1\|2758815_2759472_-	DUF421 domain-containing protein	NA	NA	NA	NA
WP_003152697.1\|2759638_2760025_+	TIGR04086 family membrane protein	NA	NA	NA	NA
WP_007408187.1\|2760076_2760337_-	preprotein translocase subunit YajC	A0A1B1IVR5	uncultured_Mediterranean_phage	1.9e-06	46.9
WP_007408186.1\|2760367_2761513_-\|tRNA	tRNA guanosine(34) transglycosylase Tgt	A0A1B1IVQ4	uncultured_Mediterranean_phage	8.1e-89	44.8
WP_003152692.1\|2761540_2762569_-\|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	NA	NA	NA	NA
WP_003152687.1\|2762594_2762795_-	DUF2905 domain-containing protein	NA	NA	NA	NA
WP_007408185.1\|2762787_2763792_-	Holliday junction branch migration DNA helicase RuvB	A0A127AWE7	Bacillus_phage	4.0e-07	30.0
WP_003152683.1\|2763802_2764408_-	Holliday junction branch migration protein RuvA	NA	NA	NA	NA
WP_007408184.1\|2764542_2765052_-	BofC C-terminal domain-containing protein	NA	NA	NA	NA
WP_007408183.1\|2765184_2765424_-	hypothetical protein	NA	NA	NA	NA
WP_020954253.1\|2765437_2766031_-	YhcN/YlaJ family sporulation lipoprotein	NA	NA	NA	NA
WP_007408181.1\|2766178_2767369_-\|coat	SafA/ExsA family spore coat assembly protein	NA	NA	NA	NA
WP_007408180.1\|2767495_2768599_-	quinolinate synthase NadA	NA	NA	NA	NA
WP_007408179.1\|2768600_2769449_-	carboxylating nicotinate-nucleotide diphosphorylase	NA	NA	NA	NA
WP_007408178.1\|2769430_2770996_-	L-aspartate oxidase	NA	NA	NA	NA
WP_007408177.1\|2771099_2772251_+	IscS subfamily cysteine desulfurase	A0A141ZJV0	Faustovirus	4.6e-31	29.9
WP_012118101.1\|2772247_2772790_+	transcription repressor NadR	NA	NA	NA	NA
WP_007408174.1\|2772815_2773673_-	prephenate dehydratase	NA	NA	NA	NA
WP_007408173.1\|2773686_2774130_-	transcriptional regulator ThrR	NA	NA	NA	NA
WP_007408172.1\|2774183_2775470_-	GTPase ObgE	NA	NA	NA	NA
WP_007408171.1\|2775501_2776080_-	Spo0B domain-containing protein	NA	NA	NA	NA
WP_003152662.1\|2776397_2776682_-	50S ribosomal protein L27	NA	NA	NA	NA
WP_012118103.1\|2776694_2777036_-\|protease	ribosomal-processing cysteine protease Prp	NA	NA	NA	NA
WP_003152660.1\|2777038_2777347_-	50S ribosomal protein L21	NA	NA	NA	NA
WP_007408169.1\|2777492_2778359_-\|protease	site-2 protease family protein	NA	NA	NA	NA
WP_007408168.1\|2778351_2779155_-	M23 family metallopeptidase	NA	NA	NA	NA
WP_003152655.1\|2779282_2780086_-	septum site-determining protein MinD	NA	NA	NA	NA
WP_003152653.1\|2780088_2780769_-	septum site-determining protein MinC	NA	NA	NA	NA
WP_007408167.1\|2780822_2781341_-	rod shape-determining protein MreD	NA	NA	NA	NA
WP_007408166.1\|2781337_2782201_-	rod shape-determining protein MreC	NA	NA	NA	NA
WP_003152647.1\|2782231_2783245_-	rod shape-determining protein MreB	NA	NA	NA	NA
WP_007408165.1\|2783336_2784032_-	DNA repair protein RadC	NA	NA	NA	NA
WP_007408164.1\|2784063_2784633_-	septum formation inhibitor Maf	NA	NA	NA	NA
WP_007408163.1\|2784773_2785775_-	SPOR domain-containing protein	NA	NA	NA	NA
WP_007408162.1\|2785901_2786654_-	prepilin peptidase	NA	NA	NA	NA
WP_007408161.1\|2786793_2788086_-	bifunctional folylpolyglutamate synthase/dihydrofolate synthase	NA	NA	NA	NA
WP_007408160.1\|2788144_2790787_-\|tRNA	valine--tRNA ligase	A0A1V0S951	Catovirus	3.7e-161	42.3
WP_003152639.1\|2791239_2791431_+	hypothetical protein	NA	NA	NA	NA
WP_007408159.1\|2791445_2792468_-\|coat	spore coat protein YsxE	NA	NA	NA	NA
WP_020954255.1\|2792501_2794388_-	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA
WP_007408158.1\|2794520_2795810_-	glutamate-1-semialdehyde 2,1-aminomutase	NA	NA	NA	NA
WP_015240312.1\|2795838_2796813_-	porphobilinogen synthase	NA	NA	NA	NA
WP_007408156.1\|2796818_2797598_-	uroporphyrinogen-III synthase	NA	NA	NA	NA
WP_007408155.1\|2797587_2798529_-	hydroxymethylbilane synthase	NA	NA	NA	NA
WP_007408154.1\|2798563_2799394_-	cytochrome c biogenesis protein CcsA	NA	NA	NA	NA
WP_007408153.1\|2799401_2800769_-\|tRNA	glutamyl-tRNA reductase	NA	NA	NA	NA
WP_007408152.1\|2800963_2801455_+	hypothetical protein	NA	NA	NA	NA
WP_003152626.1\|2801487_2802075_-	YihA family ribosome biogenesis GTP-binding protein	NA	NA	NA	NA
WP_007408151.1\|2802071_2804396_-	endopeptidase La	A0A0R6PGP8	Moraxella_phage	4.7e-184	44.3
WP_012118116.1\|2804595_2806254_-\|protease	ATP-dependent protease LonB	A0A167RA83	Powai_lake_megavirus	1.9e-14	32.7
WP_007408149.1\|2806404_2807667_-\|protease	ATP-dependent protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	4.2e-147	65.3

DBSCAN-SWA_10

3081928 : 3090574

uncultured_Caudovirales_phage(70.0%)