CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NC_022583	Mesoplasma florum W37 chromosome 1, complete sequence	1 crisprs	NA	0	2	0	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NC_022583_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_022583_1

667053-667402

Orphan

Consensus_repeat	Method
GAACATATAAGACATATCAGTTACATTTGAAGTATCCCATCCAGAAATAT	PILER-CR

4 spacers

The CRISPR arrays of NC_022583_1

>merge|NC_022583|1|667053-667402|PILER-CR
GAACATATAAGACATATCAGTTACATTTGAAGTATCCCATCCAGAAATATCATGATTAAAAATATAGGCAAATCTAAACATACCAGACATATCAGTTACATTTGAAGTATCCCATTTAGAAATATCTTGATCAAACATATGAGCGTTGTTGAACATATTAGACATATCAGTTACATTTGAAGTATCCCATCCAGAAATATTGTGATTAAACGCAGAAGCATTCGAGAACATATTAGACATATCAGTTACATTTGAAGTATCCCATCCAGAAATATCCTGATCAAACACTCAAGCTTCAGAGAACATATAAGACATATCAGTTACATTTGAAGTATCCCATCCAGAAATAT

>NC_022583|1|1|667053-667402|PILER-CR
GAACATATAAGACATATCAGTTACATTTGAAGTATCCCATCCAGAAATAT	CATGATTAAAAATATAGGCAAATCT
AAACATACCAGACATATCAGTTACATTTGAAGTATCCCATTTAGAAATAT	CTTGATCAAACATATGAGCGTTGTT
GAACATATTAGACATATCAGTTACATTTGAAGTATCCCATCCAGAAATAT	TGTGATTAAACGCAGAAGCATTCGA
GAACATATTAGACATATCAGTTACATTTGAAGTATCCCATCCAGAAATAT	CCTGATCAAACACTCAAGCTTCAGA
GAACATATAAGACATATCAGTTACATTTGAAGTATCCCATCCAGAAATAT

Protein	Signature genes	Signature genes Name	Protein_function
NC_022583.1\|WP_011183437.1\|662596_662983_-\|50S-ribosomal-protein-L19	unknown	unknown	gnl\|CDD\|235418
NC_022583.1\|WP_023026071.1\|669937_670732_-\|hypothetical-protein	unknown	unknown	unknown
NC_022583.1\|WP_023026064.1\|664630_665500_-\|hypothetical-protein	unknown	unknown	unknown
NC_022583.1\|WP_023026076.1\|672898_673528_-\|SMC-Scp-complex-subunit-ScpB	unknown	unknown	gnl\|CDD\|377219
NC_022583.1\|WP_011183438.1\|662984_663716_-\|tRNA-(guanosine(37)-N1)-methyltransferase-TrmD	unknown	unknown	gnl\|CDD\|234581
NC_022583.1\|WP_023026081.1\|675260_675830_-\|hypothetical-protein	unknown	unknown	unknown
NC_022583.1\|WP_023026079.1\|674404_675244_-\|hypothetical-protein	unknown	unknown	unknown
NC_022583.1\|WP_023026069.1\|668642_669446_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237177
NC_022583.1\|WP_023026083.1\|675839_677324_-\|hypothetical-protein	unknown	unknown	unknown
NC_022583.1\|WP_041356913.1\|660176_660488_-\|hypothetical-protein	unknown	unknown	unknown
NC_022583.1\|WP_023026078.1\|673520_674354_-\|segregation/condensation-protein-A	unknown	unknown	gnl\|CDD\|234635
NC_022583.1\|WP_011183440.1\|664273_664543_-\|30S-ribosomal-protein-S16	unknown	unknown	gnl\|CDD\|234588
NC_022583.1\|WP_023026060.1\|662016_662391_-\|hypothetical-protein	unknown	unknown	unknown
NC_022583.1\|WP_023026057.1\|660468_660963_-\|hypothetical-protein	unknown	unknown	unknown
NC_022583.1\|WP_023026058.1\|661250_661838_-\|hypothetical-protein	unknown	unknown	unknown
NC_022583.1\|WP_023026062.1\|663715_664216_-\|16S-rRNA-processing-protein-RimM	unknown	unknown	gnl\|CDD\|223877
NC_022583.1\|WP_023026066.1\|665609_666173_+\|inorganic-diphosphatase	unknown	unknown	gnl\|CDD\|376376
NC_022583.1\|WP_011183444.1\|670794_671508_-\|YebC/PmpR-family-DNA-binding-transcriptional-regulator	unknown	unknown	gnl\|CDD\|237084
NC_022583.1\|WP_023026074.1\|672143_672899_-\|rRNA-pseudouridine-synthase	unknown	unknown	gnl\|CDD\|224108
NC_022583.1\|WP_023026073.1\|671509_672130_-\|deoxynucleoside-kinase	unknown	unknown	gnl\|CDD\|238836

Protein	Function_ID	Function_description	E-value
NC_022583.1\|WP_023026076.1\|672898_673528_-\|SMC-Scp-complex-subunit-ScpB	gnl\|CDD\|377219	pfam04079, SMC_ScpB, Segregation and condensation complex subunit ScpB. This is a family of prokaryotic proteins that form one of the subunits, ScpB, of the segregation and condensation complex, condensin, that plays a key role in the maintenance of the chromosome. In prokaryotes the complex consists of three proteins, SMC, ScpA (kleisin) and ScpB. ScpB dimerizes and binds to ScpA. As originally predicted, ScpB is structurally a winged-helix at both its N- and C-terminal halves. IN Bacillus subtilis,one Smc dimer is bridged by a single ScpAB to generate asymmetric tripartite rings analogous to eukaryotic SMC complex ring-shaped assemblies.	8.30447e-38
NC_022583.1\|WP_011183440.1\|664273_664543_-\|30S-ribosomal-protein-S16	gnl\|CDD\|234588	PRK00040, rpsP, 30S ribosomal protein S16; Reviewed.	1.54139e-37
NC_022583.1\|WP_023026078.1\|673520_674354_-\|segregation/condensation-protein-A	gnl\|CDD\|234635	PRK00104, scpA, segregation and condensation protein A; Reviewed.	7.33139e-41
NC_022583.1\|WP_023026073.1\|671509_672130_-\|deoxynucleoside-kinase	gnl\|CDD\|238836	cd01673, dNK, Deoxyribonucleoside kinase (dNK) catalyzes the phosphorylation of deoxyribonucleosides to yield corresponding monophosphates (dNMPs). This family consists of various deoxynucleoside kinases including deoxyribo- cytidine (EC 2.7.1.74), guanosine (EC 2.7.1.113), adenosine (EC 2.7.1.76), and thymidine (EC 2.7.1.21) kinases. They are key enzymes in the salvage of deoxyribonucleosides originating from extra- or intracellular breakdown of DNA.	1.89594e-58
NC_022583.1\|WP_011183437.1\|662596_662983_-\|50S-ribosomal-protein-L19	gnl\|CDD\|235418	PRK05338, rplS, 50S ribosomal protein L19; Provisional.	1.27907e-57
NC_022583.1\|WP_011183438.1\|662984_663716_-\|tRNA-(guanosine(37)-N1)-methyltransferase-TrmD	gnl\|CDD\|234581	PRK00026, trmD, tRNA (guanine-N(1)-)-methyltransferase; Reviewed.	5.78953e-132
NC_022583.1\|WP_023026069.1\|668642_669446_-\|hypothetical-protein	gnl\|CDD\|237177	PRK12704, PRK12704, phosphodiesterase; Provisional.	5.73728e-06
NC_022583.1\|WP_011183444.1\|670794_671508_-\|YebC/PmpR-family-DNA-binding-transcriptional-regulator	gnl\|CDD\|237084	PRK12378, PRK12378, YebC/PmpR family DNA-binding transcriptional regulator.	2.1245e-109
NC_022583.1\|WP_023026062.1\|663715_664216_-\|16S-rRNA-processing-protein-RimM	gnl\|CDD\|223877	COG0806, RimM, RimM protein, required for 16S rRNA processing [Translation, ribosomal structure and biogenesis].	4.67636e-20
NC_022583.1\|WP_023026066.1\|665609_666173_+\|inorganic-diphosphatase	gnl\|CDD\|376376	pfam00719, Pyrophosphatase, Inorganic pyrophosphatase.	1.20542e-73
NC_022583.1\|WP_023026074.1\|672143_672899_-\|rRNA-pseudouridine-synthase	gnl\|CDD\|224108	COG1187, RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis].	1.48259e-74

>NC_022583.1|WP_023026066.1|665609_666173_+|inorganic-diphosphatase
MSKNNVLDMIVEIPKGSSNKYEVDAKTGRIILDRVLYGANFYPGEYGMVENTLDWDGDPLDVISLCTYPTMPGVQVSVRILGSIKMIDAGEIDTKLFGVFNDDPRFSSYEKLEDVPQHLRDEIENFFLQYKALQKKSVKINGWGTLEEAIEELHECKERFAEYKDRLEAGERDLILAEWKAKGIGQG
>NC_022583.1|WP_023026064.1|664630_665500_-|hypothetical-protein
MKKNKKEYGTYLKDISLLEEEEINNLEHKKEDHYHGIHHFDDRGQHDHIEKNEFKLSIEFKMSRRRLIYKMVLTSVFLALTATVSAIDIFFEKIALPVGSGQLWIDFRFLDIAFICISIATLGPIFSSIIGFLNPFIHFAIHGGEHGIWSTAIEAPQNILIVWMVWVVFNVFFNNSPIHRDTDKTKARFKRFVPIPVMIILASVISTGMFILGMYLDGLTSSHDHIHEHSIQLFHEEHHHLDGKLENVTDINFIILLSIFAWNMLRYTVAFSIFSIVEWRMRPINHRYK
>NC_022583.1|WP_011183440.1|664273_664543_-|30S-ribosomal-protein-S16
MVKIRLKRIGKKQAPFYRIVAADSRVNRNGQYIELIGTFDPLKSEVKINNELALKWLQNGAQPTETVRELLSQQGVMKALHEAKLANKK
>NC_022583.1|WP_023026062.1|663715_664216_-|16S-rRNA-processing-protein-RimM
MENKNLLSIGKIVNTFGIKGAVKIALEKNIEVNDINGIKLLFIENTNNVIIPKQVESISMQKSHLVVYFKEHNHINEVEIFKGKKVKYLNDNDAFSIFYDLTYYSVVYNNQNGKVIETMFNGNHDLVKVLLENEEKAFWVPLVDVYINNIDDESRIITLKNIEGLK
>NC_022583.1|WP_011183438.1|662984_663716_-|tRNA-(guanosine(37)-N1)-methyltransferase-TrmD
MKYSILTLFPNIIKSYISESIIKKALEREKIELEIIDIRDFTTLPHNQVDEYQFGGGRGMVLMCDPVVSAIESVKTENSIVVLTSPQGKTWNQNLAKSFATEYNHIIIVCGHYEGFDERILKYIDVEISIGDYVLTGGELPSLIMLDSITRILPGVINTESHEQESFENNLLDYPVYTKPHDYRGDKVPEVLLSGHHANIQKWRDEQQLISTFNKRPDLIDESKLNKIQIQLLENLRKSKGDK
>NC_022583.1|WP_011183437.1|662596_662983_-|50S-ribosomal-protein-L19
MASKATKTTQSKYAIINNQLRNDLPDFTSGDTIKVDVKIKEGEKFRIQTFEGLVIKTQGSGITYSVVVRKLSNGVFVERTFPLHSPIIDKVTIVKRGRVRRARIYYIRKLSGKAARIKEILPTKADKK
>NC_022583.1|WP_023026060.1|662016_662391_-|hypothetical-protein
MKFKEYYKKITGETEYSIIGLRIFIYLSNKTLDKLANEILKKQIEHGTWINSNPVEMFANEIKRQIGEFYLENQIALKMKKDLLNVINIAVQELLKLDNGVLELEDLLGKELFNELYTEEKFKC
>NC_022583.1|WP_023026058.1|661250_661838_-|hypothetical-protein
MAQAKIKKPAIKGWNVPIARRLVDKERSTKDTLRIIVPSEDGNVLRSFNVPKKFVTDNNNEKDYFYIWIPKKDFTQWSYSYIWEKGQYKQLACKALGFNHLVELMNICAHFTRQLIASIKNALKTIKDKAAAQVRNIIKMQKEFNETELKISEVNLELDQLVTKSYLDKEGKDKESPPKEVKNEFVMDKNIDIEW
>NC_022583.1|WP_023026057.1|660468_660963_-|hypothetical-protein
MKEKNIVVGIDPSGIGTTGIVIKEWNPTYWPRTWNTNIEANSPVEAAIKIIEYINKVKDKYDDLSIKEVIVEVPHKGIEKWEQVKATRELVGILKYVYREKFKGHQPNHKDRTLKANLKKTKRNYSDHELDAEVIMMAHFKEEVYGWSCENFLGREKKHDKKND
>NC_022583.1|WP_041356913.1|660176_660488_-|hypothetical-protein
MIKKMTKQDTWAKIQIMGDVRTIPKLKEDKNKELSLEIKIGFKGGTIFAYAKQESIMYEMMDLKIGDVISVKGKFVNIWYPTATGNFAAIDNITKWTKEGILE
>NC_022583.1|WP_023026069.1|668642_669446_-|hypothetical-protein
MKTIIKLNQNKFKNIFFSLVMMVIFIILAFMFKMINQAINGTSEWKEIFESQANLVNRTDLSWFANGKITTSFFTGPVGSKSFSEFNLLYSVNGGYIFLLPIFWDLLINWILIVGIAFIFGFIIYEFFKNNKMLKIKSISNQQDKFKKSNNVNEKARKINSKKRSKISEESATMFISKMEEKYEKELSEDEIEFEKDEKLSIAERSKIDGSDKISEKRYELQKYSNKLRSVSIEKNLSKKLQEVNLRNLTKRELITYMKKVKNEIAN
>NC_022583.1|WP_023026071.1|669937_670732_-|hypothetical-protein
MDNLFIINLMLLIVNFIVMISLLFSVLYFNKSYINYQVPRINSYNDVISSKEIERIIEQFKRIYHLADYEIIYADTENYISLFRNLNKSKKQIVISKKIFESVGYEIDYIISRLWIASKINEKNGLVRGYKWLLITIPFLSLSLMCICLLMNCILFGYMSGKTNENIDKIILWVWKIPMFSVLFFIGLISMIISYLFSFKVKEGIEYNYSNEISSLVKLALEDYTQDFVSARTYAQNIKISYLPLIKNADFWENSKWVGPFVYM
>NC_022583.1|WP_011183444.1|670794_671508_-|YebC/PmpR-family-DNA-binding-transcriptional-regulator
MGRAHEVRAASMAKTAAKKSAANGRASKEIYMAAKAGGSDPSSNLALRALIDKAKSNQIPKEVIDRAIKRATGGDAENYVSNRYEGMGPGNTAIIVDALTSNVNRAAANIREVFNKNHGNPEGKVAFMFEEVSMFAFKGKTEEEVLEQLMMSEVDVNDVEVEEDMIIVTAPYKSFNAVKHSLDELGIEEYLMSEIKLIPIDDYIEVSDAELKQQLQTLLDKLDELEDVQNVYHNATI
>NC_022583.1|WP_023026073.1|671509_672130_-|deoxynucleoside-kinase
MKIAIFGTVGAGKSSISQELSERLNYEIFPEPIDENPYFEDYYKDIKAYAFRMQIFMLTARSKQLFAAKDLKNKIFDRTIIEDPIFMNVGHKMGNVNDTDYKTYCDFFQYVVSENLRYPNDRLKFDLVVYLKVSDGTSIRRINERGRAAELSIDKNYWKILNESYEEYYQEHKNDFPFLVIDANNDNLNEKVEEVIRNIEKIKKEF
>NC_022583.1|WP_023026074.1|672143_672899_-|rRNA-pseudouridine-synthase
MERLQKIISARGVTSRRNAEKLIVEGKVKVNGVVITELGFKASTDADIEVNGKQTTKNNEKFYYLFNKPRLVLTTMYDPKQRKTVADYFKDVPTRVYPVGRLDYDVSGLIIMTNDGEFANFVMHPRYEFFKTYQGLCKGKVSKQQVNQLLKGVKIEDDYFTKAIQAELLNYDQEKDQSIIEMTIAEGKKHHVKQMFSAIEANLMKLKRTKIEFLEVDDLEVGRYRELKPHEVKKFYGIYQSTKRKEDLKIK
>NC_022583.1|WP_023026076.1|672898_673528_-|SMC-Scp-complex-subunit-ScpB
MNSNIKAIVEGLLFVYGDDGISLLDLQNVLEDVRPVTIQEAILELEKKYSSDPDCAFSIQKFGKNKYRLQTKPELHEHFAKLELEVNNSRLSNSSIEVLSIIVYKGPISKHDIELIRQAECSYQIYRLRQKKLIKAVGKTSTGANLYTITDNFFKLFNITGGFEALPQIDFASYKNQDEENDFEEEIKVTEEMISEEDVFEEDDSEGMF
>NC_022583.1|WP_023026078.1|673520_674354_-|segregation/condensation-protein-A
MQHWDELNISNFSGPLDLLWNMVKDKKIDIFEINLSEIIDQYLKYIEGQQKLDIELASEYLVLAAQMIEMKSRILLPNDDDDSEDELMFEDLLEQINQYGQIKEVSEYFYNKQEEYLKTFSKPKTKKSFIQSIADRNDELMVNPLDIGIDEFAEIFQSILQRAQNFDEDFEYDENMLLEDAYAPIQNEIISPQVIARSIVDVMKTNKHKEWRLEEVITGYELNLINLISTFLAVLDMVRHQVAVINQKNDTLEFRFTSEALADESVLRRIEEVEEYE
>NC_022583.1|WP_023026079.1|674404_675244_-|hypothetical-protein
MNELKLVDYSEKIKQLIKIVKNKRIKQSEADDILFFIANMIDEVILKDSTISHRLNINLIKNNRILDIDIKPSKKVVSTKDTHEFLYLLKTLLSLMTIKNYFFDFYIYSEIKMIVNYYINKSSKSKSYDSVNERFAINELEFHDQLVMYKYLYSIFDKLMFINVFFVDKYNLKSIDVKSNFIFTKDFDSVSMPLFKTTVRKLAFADYLKILNKSVSFHYIRKLRNNLEHSFTDPKSKYNIALETELLFVLVARTLIQMHRDLKNDDELLKLIKLNQVNK
>NC_022583.1|WP_023026081.1|675260_675830_-|hypothetical-protein
MKNNFEKINDIKIDENLNNKVFRDFIKYFENENKITISKSLYEKLEEVVSKIASYNNHKFVKPSDLFGMLFIQQEEIDDFENKFYESIKQTMFKEVITYKNLNSDIKDDFEVKYNNKTLTLEEKRHAAKLAEWIRKQVIIFSDEKLIEHNEQLDNKITGEMIKSFFKEQNEIFIRIYKWHANAFEIISN
>NC_022583.1|WP_023026083.1|675839_677324_-|hypothetical-protein
MNNWDLIIVVPFVIVLGFLFLYFIYKKLNFEKKLFWFYMQTLIVWVMNAILIQENSNILTDTFLNTPPAIIVVLLLFGSSILFAILLKPLATWITGKIRSRNIWIRCSIVSSIVASMLLLIPLNDSAWFKFIIILQAIILAISISSQSLYFLYLNEQKYNRLFALKVSFSVGFVITFATFIGNWIISLNNFLTDKLIILNIFVIICLLISLLISFKIGTENKNKIGEFRLVLKEELIKYSKSTLVKLIILTLLLGVIYGFVQSPIFRMYFVTNSKINNNDVEWLSTLDRKYQALFIFGQFAIGYTLYKILLPKIGVKNLIYGLIVISGIALLISTFIINPAWMVISNLIFGASYFVLFYMWFGFAIMWNYRATKGVPVTGFIASALLVGQFLVIFVFNSIIYTKSGLFTYQSIEAIIAESNIDNIIAFENNLKIVIRITAAALFFINSIYLFLTVIWIDQVIAEFVDYANIKHIFSEYEKQSVERKINSRIVTE

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NC_022583_1	1.1\|667103\|25\|NC_022583\|PILER-CR	667103-667127	25	AP018277	Calothrix sp. NIES-4101 plasmid plasmid4 DNA, complete genome	104402-104426	3	0.88
NC_022583_1	1.3\|667253\|25\|NC_022583\|PILER-CR	667253-667277	25	NZ_CP009639	Bacillus cereus 03BB108 plasmid pBFI_1, complete sequence	247243-247267	3	0.88
NC_022583_1	1.3\|667253\|25\|NC_022583\|PILER-CR	667253-667277	25	NZ_CP053963	Bacillus cereus strain FDAARGOS_802 plasmid unnamed3, complete sequence	6818-6842	3	0.88
NC_022583_1	1.3\|667253\|25\|NC_022583\|PILER-CR	667253-667277	25	MH355583	Enterococcus phage vB_EfaS_LM99, complete genome	33866-33890	5	0.8
NC_022583_1	1.3\|667253\|25\|NC_022583\|PILER-CR	667253-667277	25	MK721191	Enterococcus phage vB_EfaS_Ef5.4, complete genome	34857-34881	5	0.8
NC_022583_1	1.3\|667253\|25\|NC_022583\|PILER-CR	667253-667277	25	MK360024	Enterococcus phage vB_EfaS_Max, complete genome	35347-35371	5	0.8
NC_022583_1	1.3\|667253\|25\|NC_022583\|PILER-CR	667253-667277	25	CAJDJX010000002	Enterococcus phage Q69 genome assembly, contig: phageQ69-genome, whole genome shotgun sequence	37369-37393	5	0.8
NC_022583_1	1.3\|667253\|25\|NC_022583\|PILER-CR	667253-667277	25	CAJDKF010000002	Enterococcus phage vB_EfaS_159 genome assembly, contig: phage159-genome, whole genome shotgun sequence	37807-37831	5	0.8
NC_022583_1	1.3\|667253\|25\|NC_022583\|PILER-CR	667253-667277	25	JX193904	Enterococcus phage EfaCPT1, complete genome	33139-33163	5	0.8

1. spacer 1.1|667103|25|NC_022583|PILER-CR matches to AP018277 (Calothrix sp. NIES-4101 plasmid plasmid4 DNA, complete genome) position: , mismatch: 3, identity: 0.88

catgattaaaaatataggcaaatct	CRISPR spacer
cctgattaaaaatatagaaaaatct	Protospacer
* ***************. ******

2. spacer 1.3|667253|25|NC_022583|PILER-CR matches to NZ_CP009639 (Bacillus cereus 03BB108 plasmid pBFI_1, complete sequence) position: , mismatch: 3, identity: 0.88

tgtgattaaacgcagaagcattcga	CRISPR spacer
ggtgattaaacgcaaaagcattgga	Protospacer
 *************.******* **

3. spacer 1.3|667253|25|NC_022583|PILER-CR matches to NZ_CP053963 (Bacillus cereus strain FDAARGOS_802 plasmid unnamed3, complete sequence) position: , mismatch: 3, identity: 0.88

tgtgattaaacgcagaagcattcga	CRISPR spacer
ggtgattaaacgcaaaagcattgga	Protospacer
 *************.******* **

4. spacer 1.3|667253|25|NC_022583|PILER-CR matches to MH355583 (Enterococcus phage vB_EfaS_LM99, complete genome) position: , mismatch: 5, identity: 0.8

tgtgattaaacgcagaagcattcga	CRISPR spacer
atggattaaacgcagaagcattagc	Protospacer
   ******************* *

5. spacer 1.3|667253|25|NC_022583|PILER-CR matches to MK721191 (Enterococcus phage vB_EfaS_Ef5.4, complete genome) position: , mismatch: 5, identity: 0.8

tgtgattaaacgcagaagcattcga	CRISPR spacer
atggattaaacgcagaagcattagc	Protospacer
   ******************* *

6. spacer 1.3|667253|25|NC_022583|PILER-CR matches to MK360024 (Enterococcus phage vB_EfaS_Max, complete genome) position: , mismatch: 5, identity: 0.8

tgtgattaaacgcagaagcattcga	CRISPR spacer
atggattaaacgcagaagcattagc	Protospacer
   ******************* *

7. spacer 1.3|667253|25|NC_022583|PILER-CR matches to CAJDJX010000002 (Enterococcus phage Q69 genome assembly, contig: phageQ69-genome, whole genome shotgun sequence) position: , mismatch: 5, identity: 0.8

tgtgattaaacgcagaagcattcga	CRISPR spacer
acggattaaacgcagaagcattagc	Protospacer
   ******************* *

8. spacer 1.3|667253|25|NC_022583|PILER-CR matches to CAJDKF010000002 (Enterococcus phage vB_EfaS_159 genome assembly, contig: phage159-genome, whole genome shotgun sequence) position: , mismatch: 5, identity: 0.8

tgtgattaaacgcagaagcattcga	CRISPR spacer
acggattaaacgcagaagcattagc	Protospacer
   ******************* *

9. spacer 1.3|667253|25|NC_022583|PILER-CR matches to JX193904 (Enterococcus phage EfaCPT1, complete genome) position: , mismatch: 5, identity: 0.8

tgtgattaaacgcagaagcattcga	CRISPR spacer
atggattaaacgcagaagcattagc	Protospacer
   ******************* *

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage