CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP019192	Salmonella enterica subsp. enterica serovar Rubislaw str. ATCC 10717 chromosome, complete genome	2 crisprs	PD-DExK,WYL,cas3,csa3,DEDDh,DinG	0	1	7	0
NZ_CP019193	Salmonella enterica subsp. enterica serovar Rubislaw str. ATCC 10717 plasmid pATCC10717, complete sequence	0 crisprs	NA	0	0	0	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP019192_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019192_1

937375-937462

Unclear

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAAC	CRISPRCasFinder

1 spacers

cas3

The CRISPR arrays of NZ_CP019192_1

>merge|NZ_CP019192|1|937375-937462|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCGCCCTAACGGATTAGGTAGTAACCTGAAACAGGGTGTTCCCCGCGCCAGCGGGGATAAAC

>NZ_CP019192|1|1|937375-937462|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAAC	CGCCCTAACGGATTAGGTAGTAACCTGAAACAGG
GTGTTCCCCGCGCCAGCGGGGATAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019192.1\|WP_001221538.1\|944835_945597_+\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732
NZ_CP019192.1\|WP_001092256.1\|939693_941133_+\|sulfate-adenylyltransferase-subunit-CysN	unknown	unknown	gnl\|CDD\|235349
NZ_CP019192.1\|WP_001199956.1\|927303_927975_+\|7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|275126
NZ_CP019192.1\|WP_000210864.1\|924149_925787_+\|CTP-synthase-(glutamine-hydrolyzing)	unknown	unknown	gnl\|CDD\|235437
NZ_CP019192.1\|WP_001118109.1\|941742_942099_+\|DUF3561-family-protein	unknown	unknown	gnl\|CDD\|371891
NZ_CP019192.1\|WP_001173661.1\|941119_941725_+\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|179661
NZ_CP019192.1\|WP_000108313.1\|929240_929603_-\|6-carboxytetrahydropterin-synthase-QueD	unknown	unknown	gnl\|CDD\|238264
NZ_CP019192.1\|WP_023207764.1\|943329_943809_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851
NZ_CP019192.1\|WP_023207767.1\|931837_933550_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	unknown	unknown	gnl\|CDD\|237402
NZ_CP019192.1\|WP_000517480.1\|942289_942601_+\|cell-division-protein-FtsB	unknown	unknown	gnl\|CDD\|179156
NZ_CP019192.1\|WP_000490483.1\|937478_938525_-\|aminopeptidase	unknown	unknown	gnl\|CDD\|182299
NZ_CP019192.1\|WP_000741649.1\|942619_943330_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
NZ_CP019192.1\|WP_000080397.1\|933625_934360_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NZ_CP019192.1\|WP_000372384.1\|938775_939684_+\|sulfate-adenylyltransferase-subunit-CysD	unknown	unknown	gnl\|CDD\|235375
NZ_CP019192.1\|WP_023207768.1\|930038_931838_+\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	unknown	unknown	gnl\|CDD\|182862
NZ_CP019192.1\|WP_000134246.1\|943805_944855_+\|tRNA-pseudouridine(13)-synthase-TruD	unknown	unknown	gnl\|CDD\|234884
NZ_CP019192.1\|WP_023207766.1\|934447_935401_-\|SPI-1-type-III-secretion-system-effector-SopD	unknown	unknown	gnl\|CDD\|185277
NZ_CP019192.1\|WP_001522969.1\|928355_929153_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|224158
NZ_CP019192.1\|WP_000036734.1\|925869_927168_+\|phosphopyruvate-hydratase	unknown	unknown	gnl\|CDD\|234617
NZ_CP019192.1\|WP_023207765.1\|935784_937362_-\|CRISPR-associated-helicase-Cas3'	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|182031

Protein	Function_ID	Function_description	E-value
NZ_CP019192.1\|WP_001221538.1\|944835_945597_+\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	1.7078e-146
NZ_CP019192.1\|WP_001092256.1\|939693_941133_+\|sulfate-adenylyltransferase-subunit-CysN	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
NZ_CP019192.1\|WP_001199956.1\|927303_927975_+\|7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	2.27998e-154
NZ_CP019192.1\|WP_000210864.1\|924149_925787_+\|CTP-synthase-(glutamine-hydrolyzing)	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
NZ_CP019192.1\|WP_001118109.1\|941742_942099_+\|DUF3561-family-protein	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	4.85353e-49
NZ_CP019192.1\|WP_001173661.1\|941119_941725_+\|adenylyl-sulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	1.53293e-145
NZ_CP019192.1\|WP_000108313.1\|929240_929603_-\|6-carboxytetrahydropterin-synthase-QueD	gnl\|CDD\|238264	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS). Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids, as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after uptake by a carrier-mediated active transport system. Most microbes and plants lack this system and must synthesize folates de novo from guanosine triphosphate. One enzyme from this pathway is PTPS which catalyzes the conversion of dihydroneopterin triphosphate to 6-pyruvoyl tetrahydropterin. The functional enzyme is a hexamer of identical subunits.	2.78454e-58
NZ_CP019192.1\|WP_023207764.1\|943329_943809_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	2.00011e-102
NZ_CP019192.1\|WP_023207767.1\|931837_933550_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0
NZ_CP019192.1\|WP_000517480.1\|942289_942601_+\|cell-division-protein-FtsB	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	1.08865e-64
NZ_CP019192.1\|WP_000490483.1\|937478_938525_-\|aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
NZ_CP019192.1\|WP_000741649.1\|942619_943330_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	2.24126e-119
NZ_CP019192.1\|WP_000080397.1\|933625_934360_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	5.66828e-138
NZ_CP019192.1\|WP_000372384.1\|938775_939684_+\|sulfate-adenylyltransferase-subunit-CysD	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
NZ_CP019192.1\|WP_023207768.1\|930038_931838_+\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	gnl\|CDD\|182862	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit.	0
NZ_CP019192.1\|WP_000134246.1\|943805_944855_+\|tRNA-pseudouridine(13)-synthase-TruD	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
NZ_CP019192.1\|WP_023207766.1\|934447_935401_-\|SPI-1-type-III-secretion-system-effector-SopD	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0
NZ_CP019192.1\|WP_001522969.1\|928355_929153_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|224158	COG1237, COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only].	1.92352e-102
NZ_CP019192.1\|WP_000036734.1\|925869_927168_+\|phosphopyruvate-hydratase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
NZ_CP019192.1\|WP_023207765.1\|935784_937362_-\|CRISPR-associated-helicase-Cas3'	gnl\|CDD\|182031	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3.	1.36489e-90

>NZ_CP019192.1|WP_023207765.1|935784_937362_-|CRISPR-associated-helicase-Cas3'
MSDSFRQSIWQPTENIAEDYARDDGNATTECHTWFADSRKKALLAEVGVGTLDQLLMAVMPFRHQSLRLLGMRDKILLLDEVHAYDGYMVKLLEGLLRFHAAQGGSAIILSATLPAALREKLLNAFSDGAGFMSAGGSDNAGYPWLSHLTSSGLLEQPLATRPEVQRTVAVNWIQQRQEALDIIYRVVATGQCICWIRNTVDDALDTYQQLLHEGIVPEQDLLLFHSRFAFIDRIAIENKTLNWFGNNAPVSERRGKVLIATQVVEQSLDLDFDWMITDLAPIDLLIQRAGRLQRHIRDAHGQRKSTLPDERQPPVLHILAPHWQEQAEEGWLGQELKGTGFVYADHACLWRTQALLRQHGEIRMPDNARALVDGVYEQKIAAPAGLQTISNVAFGKVLSQRSVAAQNLLRYDLGYDREASDFLWDKDREFSTRLGEESVDVYLARKDIDGQLRPLVDEIDFCWEKSRLSVRKSWWQKNSGTFQCPDEETLACFRKRHHRPSGQVVLVSDAGEASYYSKRFGLVG
>NZ_CP019192.1|WP_023207766.1|934447_935401_-|SPI-1-type-III-secretion-system-effector-SopD
MPVTLSFGNHQNYTLNESRLAHLLSADKEKAIHMGGWDKVQDHFRAEKKDHALEVLHSIIHGQGRGEPGEMEVNVEDINKIYAFKRLQHLACPAHQDLFTIKMDASQTQFLLMVGDTMISQSNIKDILNISDDTVIESMSREERQLFLQICEVIGSKMTWHPELLQESISTLRKEVTGNAQIKATVYEMMRPAEAPDHPLVEWQDSLTADEKSMLACINAGNFEPTTQFCKIGYQEVQGEVAFSMMHPCISYLLHSYSPFAEFKPTNSGFLKKLNQDYNDYHAKKMFIDVILEKIYLTHERSLHIGKDGCSRNILLT
>NZ_CP019192.1|WP_000080397.1|933625_934360_+|phosphoadenosine-phosphosulfate-reductase
MSQLDLNALNELPKVDRVLALAETNAQLETLTAEERVVWALENLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNDINKVEPMNRALKELNAQTWFAGLRREQSGSRAHLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>NZ_CP019192.1|WP_023207767.1|931837_933550_+|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit
MSEKHPGPLVVEGKLSDAERMKLESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAAQKLEPRHAMLLRCRLPGGVITTTQWQAIDKFAADNTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGFLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGLETFKAEVERRAGITFEPIRPYEFTGRGDRIGWVKGIDDKWHLTLFIESGRILDYPGRPLKTGLLEIAKVHQGEFRITANQNLIIASVPESQKAKIETLARDHGLMNAVSAQRENSMACVSFPTCPLAMAEAERFLPSFTDKVEAILEKHGIPDEHIVMRVTGCPNGCGRAMLAEIGLVGKAPGRYNLHLGGNRIGTRIPRMYKENITESDILASLDELVGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDFWE
>NZ_CP019192.1|WP_023207768.1|930038_931838_+|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit
MTTPAPLTGLLPLNPEQLARLQAATTDLTPEQLAWVSGYFWGVLNPRSGAVAVTPVPEGKMPGVTLISASQTGNARRVAEALRDDLLAANLNVTLVNAGDYKFKQIASEKLLVIVTSTQGEGEPPEEAVALHKFLFSKKAPKLTDTAFAVFSLGDTSYEFFCQSGKDFDSKLAELGGERLLDRVDADVEYQAAASEWRARVVDVLKSRVPVAAPSQSVATGAVNDIHTSPYTKDAPLTATLAVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKEIVELLWLKGDEPVTVDGKTLPLAEALEWHFELTVNTANIVENYATLTRSESLLPLVGDKAQLQHYAATTPIVDMVRFSPAQLDAEALIGLLRPLTPRLYSIASAQAEVESEVHVTVGVVRYDIEGRARAGGASSFLADRVEEEGEVRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFMQQRAADGAEGKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLNRIDLAWSRDQKEKIYVQDKLREQGAELWRWINDGAHIYVCGDARRMAADVEKALLEVIAEFGAMDIEAADEFLSELRVERRYQRDVY
>NZ_CP019192.1|WP_000108313.1|929240_929603_-|6-carboxytetrahydropterin-synthase-QueD
MSTTLYKDFTFEAAHRLPHVPEGHKCGRLHGHSFMVRLEITGEVDPHTGWIMDFADLKAAFKPTYDRLDHYYLNDIPGLSNPTSEVLAKWIWDQVKPVVPLLSAVMVKETCTAGCVYRGE
>NZ_CP019192.1|WP_001522969.1|928355_929153_+|MBL-fold-metallo-hydrolase
MALRIRVLLENHKGAGADKSLKARPGLSLLVEDESTSILFDTGPDGSFMQNALAMGIDLSDVSAVVLSHGHYDHCGGVPWLPDNSRIICHPDIARERYAAMTFLGITRKIKKLSCEVDYSRYRMMYTRDPLPIGENFIWSGEIPVVAPEAYGIFGGHDAEPDSILDEGVLIYQSAKGLVIITGCGHRGIANIVRHCQNITGIKRIYALVGGFHLRCASPFTLWRVRRFLQEQKPEKLCGCHCTGAWGRLWLPEITAPATGDVLRF
>NZ_CP019192.1|WP_001199956.1|927303_927975_+|7-carboxy-7-deazaguanine-synthase-QueE
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWDKLSDREVSLFSILAKTKESDKWGAASSEDLLAVINRQDYTARHVVITGGEPCIHDLMPLTDLLEKSGFSCQIETSGTHEVRCTPNTWVTVSPKVNMRGGYDVLSQALERANEIKHPVGRVRDIEALDELLATLSDDKPRVIALQPISQKEDATRLCIETCIARNWRLSMQTHKYLNIA
>NZ_CP019192.1|WP_000036734.1|925869_927168_+|phosphopyruvate-hydratase
MSKIVKVIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVGAVNGPIAQAILGKDAKDQAGIDKIMIDLDGTENKSNFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKGKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>NZ_CP019192.1|WP_000210864.1|924149_925787_+|CTP-synthase-(glutamine-hydrolyzing)
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQLAVDIGREHALFMHLTLVPYLAAAGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISMKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIYEEANPAGEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVTVNIKLIDSQDVETRGVEILKDLDAILIPGGFGYRGVEGKIATARYARENNIPYLGICLGMQVALIEFARNVAGMDNANSTEFVPDCKYPVVALITEWRDEDGNVEVRSEKSDLGGTMRLGAQQCQLSDDSLVRQLYGASTIVERHRHRYEVNNMLLKQIEAAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAASEHQKRQAK
>NZ_CP019192.1|WP_000490483.1|937478_938525_-|aminopeptidase
MFSATRRFAVILALGVGFILPAQAASPGPGEIANTQARHIATFFPGRMTGSPAEMLSADYLRQQFTQMGYQSDIRTFNSRFIYTTKDNRKNWHNVTGSTVIAAHEGRVPQQIIIMAHLDTYAPQSDADVDANLGGLTLQGMDDNAAGLGVMLELAARLKDIPTHYGIRFIATSGEEEGKLGAENLLKRMSDAEKKNTLLVINLDNLIVGDKLYFNSGKNTPEAVRTLTRDRALVIARRYGIAANTNPGRNPSYPKGTGCCNDAEVFDKAGISVLSVEATNWNLGKKDGYQQRVKNASFPNGNSWHDVRLDNQQHIDKALPGRIERRSRDVVRIMLPLVKELAKAEKTS
>NZ_CP019192.1|WP_000372384.1|938775_939684_+|sulfate-adenylyltransferase-subunit-CysD
MDQKRLTHLRQLEAESIHIIREVAAEFANPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYAFRDRTANAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWRNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMVDDDRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESHAQTLPEIIEEMLVSTTSERQGRMIDRDQAGSMELKKRQGYF
>NZ_CP019192.1|WP_001092256.1|939693_941133_+|sulfate-adenylyltransferase-subunit-CysN
MNTILAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTLQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYREETFARIREDYLTFAEQLPGDLDIRFVPLSALEGDNVAAQSANMRWYSGPTLLEVLETVDIQRAVDRQPMRFPVQYVNRPNLDFRGYAGTLASGSVKVGERIKVLPSGVESSVARIVTFDGDKEEACAGEAITLVLNDDIDISRGDLLLAANETLAPARHAAIDVVWMAEQPLAPGQSYDVKLAGKKTRARIEAIRYQIDINNLTQRDVESLPLNGIGLVEMTFDEPLALDIYQQNPVTGGLIFIDRLSNVTVGAGMVRELDERGATPPVEYSAFELELNALVRRHFPHWDARDLLGDKHGAA
>NZ_CP019192.1|WP_001173661.1|941119_941725_+|adenylyl-sulfate-kinase
MALHDENVVWHSHPVTVAAREQLHGHRGVVLWFTGLSGSGKSTVAGALEEALHQRGVSTYLLDGDNVRHGLCCDLGFSDADRQENIRRVGEVASLMADAGLIVLTAFISPHRAERQLVKERVGHDRFIEIYVNTPLAICEQRDPKGLYKKARAGELRNFTGIDAIYEAPDSPQVHLNGEQLVTNLVSQLLDLLRRRDIIRS
>NZ_CP019192.1|WP_001118109.1|941742_942099_+|DUF3561-family-protein
MPGMVKVTGFNMRNSHNITFTRSDAFMVDDDATSAFPGAVVGFVSWLLALGIPFLLYGPNTLFFFLYTWPFFLALMPVSVIIGIALHLLVKGKILFSIMFTLLAVGALFGALFIWLLG
>NZ_CP019192.1|WP_000517480.1|942289_942601_+|cell-division-protein-FtsB
MGKLTLLLLALLVWLQYSLWFGKNGIHDYSRVNDDVVAQQATNAKLKARNDQLFAEIDDLNGGQEAIEERARNELSMTKPGETFYRLVPDASKRAATAGQTHR
>NZ_CP019192.1|WP_000741649.1|942619_943330_+|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MAATLLDVCAVVPAAGFGRRMQTECPKQYLSIGNKTILEHSVHALLAHPRVTRVVIAISPGDHRFAQLPLANHPQITVVDGGNERADSVLAGLQAVAKAQWVLVHDAARPCLHQDDLARLLAISENSRVGGILASPVRDTMKRGEPGKNAIAHTVERADLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPALVEGRADNIKVTRPEDLALAEFYLTRTIHQEKA
>NZ_CP019192.1|WP_023207764.1|943329_943809_+|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLLHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLMKAAK
>NZ_CP019192.1|WP_000134246.1|943805_944855_+|tRNA-pseudouridine(13)-synthase-TruD
MTEFDNLTWLHGKPQGSGLLKANPEDFVVVEDLGFTPDGEGEHILLRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDFSAFQLEGCKVLEYARHKRKLRLGALKGNAFTLVLREISDRRDVETRLQAIRDGGVPNYFGAQRFGIGGSNLQGALRWAQSNAPVRDRNKRSFWLSAARSALFNQIVHQRLKKPDFNQVVDGDALQLAGRGSWFVATSEELPELQRRVDEKELMITASLPGSGEWGTQRAALAFEQDAIAQETVLQSLLLREKVEASRRAMLLYPQQLSWNWWDDVTVELRFWLPAGSFATSVVRELINTMGDYAHIAE
>NZ_CP019192.1|WP_001221538.1|944835_945597_+|5'/3'-nucleotidase-SurE
MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFDNGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLNGYQHYDTAAAVTCALLRGLSREPLRTGRILNVNVPDLPLAQVKGIRVTRCGSRHPADKVIPQEDPRGNTLYWIGPPGDKYDAGPDTDFAAVDEGYVSVTPLHVDLTAHSAHDVVSDWLDSVGVGTQW

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Crispr_ID: NZ_CP019192_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019192_2

3707729-3707807

Orphan

Consensus_repeat	Method
GGTTTATGCCTGATGGCGCTACGCTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP019192_2

>merge|NZ_CP019192|2|3707729-3707807|CRISPRCasFinder
GGTTTATGCCTGATGGCGCTACGCTTATCAGGCCTACATCTGGCTCAAGAATTGGTTTATGCCTGATGACGCTACGCTT

>NZ_CP019192|2|2|3707729-3707807|CRISPRCasFinder
GGTTTATGCCTGATGGCGCTACGCTT	ATCAGGCCTACATCTGGCTCAAGAATT
GGTTTATGCCTGATGACGCTACGCTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019192.1\|WP_000710534.1\|3714280_3714571_+\|DUF1471-domain-containing-protein	unknown	unknown	gnl\|CDD\|369322
NZ_CP019192.1\|WP_000610894.1\|3706489_3706867_+\|Co2+/Mg2+-efflux-protein-ApaG	unknown	unknown	gnl\|CDD\|180098
NZ_CP019192.1\|WP_000624379.1\|3707876_3708356_-\|type-3-dihydrofolate-reductase	unknown	unknown	gnl\|CDD\|182714
NZ_CP019192.1\|WP_000092999.1\|3704679_3705669_+\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	unknown	unknown	gnl\|CDD\|234696
NZ_CP019192.1\|WP_023207364.1\|3693778_3696130_+\|DNA-polymerase-II	unknown	unknown	gnl\|CDD\|235595
NZ_CP019192.1\|WP_000257211.1\|3706877_3707726_+\|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)	unknown	unknown	gnl\|CDD\|273208
NZ_CP019192.1\|WP_001287763.1\|3717592_3718879_-\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|182273
NZ_CP019192.1\|WP_000600710.1\|3710409_3710940_-\|glutathione-regulated-potassium-efflux-system-oxidoreductase-KefF	unknown	unknown	gnl\|CDD\|234852
NZ_CP019192.1\|WP_001065397.1\|3705665_3706487_+\|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	unknown	unknown	gnl\|CDD\|234708
NZ_CP019192.1\|WP_001172089.1\|3715502_3715733_-\|YgdI/YgdR-family-lipoprotein	unknown	unknown	gnl\|CDD\|380215
NZ_CP019192.1\|WP_001642466.1\|3700979_3703340_+\|LPS-assembly-protein-LptD	unknown	unknown	gnl\|CDD\|235158
NZ_CP019192.1\|WP_000203736.1\|3717308_3717596_-\|ferredoxin-like-protein-FixX	unknown	unknown	gnl\|CDD\|185346
NZ_CP019192.1\|WP_000066328.1\|3711492_3713382_-\|sulfatase-like-hydrolase/transferase	unknown	unknown	gnl\|CDD\|225661
NZ_CP019192.1\|WP_001642463.1\|3708554_3710417_-\|glutathione-regulated-potassium-efflux-system-protein-KefC	unknown	unknown	gnl\|CDD\|235131
NZ_CP019192.1\|WP_024146592.1\|3715821_3717162_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340874
NZ_CP019192.1\|WP_001116966.1\|3696303_3699210_+\|RNA-polymerase-associated-protein-RapA	unknown	unknown	gnl\|CDD\|235319
NZ_CP019192.1\|WP_162272377.1\|3714794_3715211_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019192.1\|WP_001200595.1\|3699913_3700726_-\|co-chaperone-DjlA	unknown	unknown	gnl\|CDD\|236512
NZ_CP019192.1\|WP_000525196.1\|3699221_3699881_+\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	unknown	unknown	gnl\|CDD\|236659
NZ_CP019192.1\|WP_000800482.1\|3703393_3704680_+\|peptidylprolyl-isomerase-SurA	unknown	unknown	gnl\|CDD\|236758

Protein	Function_ID	Function_description	E-value
NZ_CP019192.1\|WP_000710534.1\|3714280_3714571_+\|DUF1471-domain-containing-protein	gnl\|CDD\|369322	pfam07338, DUF1471, Protein of unknown function (DUF1471). This family consists of several hypothetical Enterobacterial proteins of around 90 residues in length. Some members of this family are annotated as ydgH precursors and contain two copies of this region, one at the N-terminus and the other at the C-terminus. The function of this family is unknown.	3.11182e-13
NZ_CP019192.1\|WP_000610894.1\|3706489_3706867_+\|Co2+/Mg2+-efflux-protein-ApaG	gnl\|CDD\|180098	PRK05461, apaG, CO2+/MG2+ efflux protein ApaG; Reviewed.	1.286e-75
NZ_CP019192.1\|WP_000624379.1\|3707876_3708356_-\|type-3-dihydrofolate-reductase	gnl\|CDD\|182714	PRK10769, folA, type 3 dihydrofolate reductase.	1.70454e-127
NZ_CP019192.1\|WP_000092999.1\|3704679_3705669_+\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	gnl\|CDD\|234696	PRK00232, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed.	0
NZ_CP019192.1\|WP_023207364.1\|3693778_3696130_+\|DNA-polymerase-II	gnl\|CDD\|235595	PRK05762, PRK05762, DNA polymerase II; Reviewed.	0
NZ_CP019192.1\|WP_000257211.1\|3706877_3707726_+\|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)	gnl\|CDD\|273208	TIGR00668, Bis5'-nucleosyl-tetraphosphatase_symmetrical, bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Diadenosine 5',5"'-P1,P4-tetraphosphate (Ap4A) is a regulatory metabolite of stress conditions. It is hydrolyzed to two ADP by this enzyme. Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase. [Cellular processes, Adaptations to atypical conditions].	0
NZ_CP019192.1\|WP_001287763.1\|3717592_3718879_-\|FAD-dependent-oxidoreductase	gnl\|CDD\|182273	PRK10157, PRK10157, putative oxidoreductase FixC; Provisional.	0
NZ_CP019192.1\|WP_000600710.1\|3710409_3710940_-\|glutathione-regulated-potassium-efflux-system-oxidoreductase-KefF	gnl\|CDD\|234852	PRK00871, PRK00871, glutathione-regulated potassium-efflux system oxidoreductase KefF.	6.31233e-132
NZ_CP019192.1\|WP_001065397.1\|3705665_3706487_+\|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	gnl\|CDD\|234708	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA.	5.15657e-147
NZ_CP019192.1\|WP_001172089.1\|3715502_3715733_-\|YgdI/YgdR-family-lipoprotein	gnl\|CDD\|380215	NF033216, lipo_YgdI_YgdR, YgdI/YgdR family lipoprotein. Members of this family are exclusively lipoproteins of small size, including YgdI and YgdR from E. coli K-12.	8.57117e-30
NZ_CP019192.1\|WP_001642466.1\|3700979_3703340_+\|LPS-assembly-protein-LptD	gnl\|CDD\|235158	PRK03761, PRK03761, LPS assembly outer membrane complex protein LptD; Provisional.	0
NZ_CP019192.1\|WP_000203736.1\|3717308_3717596_-\|ferredoxin-like-protein-FixX	gnl\|CDD\|185346	PRK15449, PRK15449, ferredoxin-like protein FixX; Provisional.	1.60149e-70
NZ_CP019192.1\|WP_000066328.1\|3711492_3713382_-\|sulfatase-like-hydrolase/transferase	gnl\|CDD\|225661	COG3119, AslA, Arylsulfatase A and related enzymes [Inorganic ion transport and metabolism].	4.00168e-83
NZ_CP019192.1\|WP_001642463.1\|3708554_3710417_-\|glutathione-regulated-potassium-efflux-system-protein-KefC	gnl\|CDD\|235131	PRK03562, PRK03562, glutathione-regulated potassium-efflux system protein KefC; Provisional.	0
NZ_CP019192.1\|WP_024146592.1\|3715821_3717162_-\|MFS-transporter	gnl\|CDD\|340874	cd17316, MFS_SV2_like, Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the Major Facilitator Superfamily. This family is composed of metazoan synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters including those that transport inorganic phosphate (Pht), aromatic compounds (PcaK and related proteins), proline/betaine (ProP), alpha-ketoglutarate (KgtP), citrate (CitA), shikimate (ShiA), and cis,cis-muconate (MucK), among others. SV2 is a transporter-like protein that serves as the receptor for botulinum neurotoxin A (BoNT/A), one of seven neurotoxins produced by the bacterium Clostridium botulinum. BoNT/A blocks neurotransmitter release by cleaving synaptosome-associated protein of 25 kD (SNAP-25) within presynaptic nerve terminals. Also included in this family is synaptic vesicle 2 (SV2)-related protein (SVOP) and similar proteins. SVOP is a transporter-like nucleotide binding protein that localizes to neurotransmitter-containing vesicles. The SV2-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.13129e-58
NZ_CP019192.1\|WP_001116966.1\|3696303_3699210_+\|RNA-polymerase-associated-protein-RapA	gnl\|CDD\|235319	PRK04914, PRK04914, RNA polymerase-associated protein RapA.	0
NZ_CP019192.1\|WP_001200595.1\|3699913_3700726_-\|co-chaperone-DjlA	gnl\|CDD\|236512	PRK09430, djlA, co-chaperone DjlA.	1.41897e-171
NZ_CP019192.1\|WP_000525196.1\|3699221_3699881_+\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	gnl\|CDD\|236659	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA.	3.00611e-157
NZ_CP019192.1\|WP_000800482.1\|3703393_3704680_+\|peptidylprolyl-isomerase-SurA	gnl\|CDD\|236758	PRK10770, PRK10770, peptidyl-prolyl cis-trans isomerase SurA; Provisional.	0

>NZ_CP019192.1|WP_000257211.1|3706877_3707726_+|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)
MATYLIGDVHGCYDELIALLQQVEFTPDTDTLWLTGDLVARGPGSLDVLRYVKSLGNSVRLVLGNHDLHLLAVFAGISRNKPKDRLTPLLEAPDADELLNWLRRQPLLQVDEEKKLVMAHAGITPQWDLQTAKECARDVEAVLSSDSYPFFLDAMYGDMPNNWSPELSGLARLRFITNAFTRMRYCFPNGQLDMYSKASPENAPAPLKPWFAIPGPVSEAYSIAFGHWASLEGKGTPEGIYALDTGCCWGGELTCLRWEDKQYFVQPSNRQMDMGEGEAVNA
>NZ_CP019192.1|WP_000610894.1|3706489_3706867_+|Co2+/Mg2+-efflux-protein-ApaG
MINSPRVCIQVQSVYIEAQSSPDDERYVFAYTVTIRNLGRAPVQLLGRYWLITNGHGRETEVQGEGVVGVQPRIAPGEEYQYTSGAVIETPLGTMQGHYEMIDENGDAFTIDIPVFRLAVPTLIH
>NZ_CP019192.1|WP_001065397.1|3705665_3706487_+|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA
MNNRVHQGHLARKRFGQNFLNDRFVIDSIVSAINPQKGQAMVEIGPGLAALTEPVGERLDKLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTMNFGELSAQLGQPLRVFGNLPYNISTPLMFHLFSYTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYCQVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPYPVKDIRVLSRITTEAFNQRRKTIRNSLGNLFSVETLTEMGIDPAMRAENISVAQYCQMANYLSENAPLKES
>NZ_CP019192.1|WP_000092999.1|3704679_3705669_+|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA
MSSAQRVVITPGEPAGIGPDLVVQLAQRAWPIELVVCADGALLTERAAMLGLPLSLLPYSPDVPAAPQPAGTLTLLPVSLHAPAIPGQLTVENGPYVVETLARACDGCLNGEFAALITGPVHKGVINDAGIPFTGHTEFFEERSQAKKVVMMLATEELRVALATTHLPLRAIADAITPALLHEVIAILHHDLRTKFGIAEPRILVCGLNPHAGEGGHMGTEEIDTIIPVLDELRAQGMKLNGPLPADTLFQPKYLDNADAVLAMYHDQGLPVLKYQGFGRGVNITLGLPFIRTSVDHGTALELAGRGKADVGSFITALNLAIKMIVNTQ
>NZ_CP019192.1|WP_000800482.1|3703393_3704680_+|peptidylprolyl-isomerase-SurA
MKNWKTLLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAGQAGQQLPDDATLRHQILERLIMDQIILQMGQKMGVKITDEQLDQAIANIAKQNNMTMDQMRSRLAYDGLNYSTYRNQIRKEMIISEVRNNEVRRRITVLPQEVDALAKQIGTQNDASTELNLSHILIALPENPTSEQVNDAQRQAESIVEEARNGADFGKLAITYSADQQALKGGQMGWGRIQELPGIFAQALSTAKKGDIVGPIRSGVGFHILKVNDLRGQSQSISVTEVHARHILLKPSPIMNDQQARLKLEEIAADIKSGKTTFAAAAKEYSQDPGSANQGGDLGWATPDIFDPAFRDALTKLHKGQISAPVHSSFGWHLIELLDTRKVDKTDAAQKDRAYRMLMNRKFSEEAATWMQEQRASAYVKILSN
>NZ_CP019192.1|WP_001642466.1|3700979_3703340_+|LPS-assembly-protein-LptD
MKKRIPTLLATMIASALYSHQGLAADLASQCMLGVPSYDRPLVKGDTNDLPVTINADNAKGNYPDDAVFTGNVDIMQGNSRLQADEVQLHQKQAEGQPEPVRTVDALGNVHYDDNQVILKGPKGWANLNTKDTNVWEGDYQMVGRQGRGKADLMKQRGENRYTILENGSFTSCLPGSDTWSVVGSEVIHDREEQVAEIWNARFKVGPVPIFYSPYLQLPVGDKRRSGFLIPNAKYTTKNYFEFYLPYYWNIAPNMDATITPHYMHRRGNIMWENEFRYLTQAGAGLMELDYLPSDKVYEDEHPKEGDKHRWLFYWQHSGVMDQVWRFNVDYTKVSDSSYFNDFDSKYGSSTDGYATQKFSVGYAVQNFDATVSTKQFQVFNDQNTSSYSAEPQLDVNYYHNDLGPFDTRIYGQAVHFVNTKDNMPEATRVHLEPTINLPLSNRWGSLNTEAKLMATHYQQTNLDSYNSDPNNKNKLEDSVNRVMPQFKVDGKLVFERDMAMLAPGYTQTLEPRVQYLYVPYRDQSGIYNYDSSLLQSDYNGLFRDRTYGGLDRIASANQVTTGVTTRVYDDAAVERFNVSVGQIYYFTESRTGDDNIKWENDDKTGSLVWAGDTYWRISERWGLRSGVQYDTRLDSVATSSSSLEYRRDQDRLVQLNYRYASPEYIQATLPSYYSTAEQYKNGINQVGAVASWPIADRWSIVGAYYFDTNSSKPADQMLGLQYNSCCYAIRVGYERKLNGWDNDKQHAIYDNAIGFNIELRGLSSNYGLGTQEMLRSNILPYQSSM
>NZ_CP019192.1|WP_001200595.1|3699913_3700726_-|co-chaperone-DjlA
MQYWGKIIGVAVALMMGGGFWGVVLGLLVGHMFDKARSRKMAWFANQRERQALFFATTFEVMGHLTKSKGRVTEADIHIASQLMDRMNLHGDSRTAAQNAFRVGKADNYPLREKMRQFRSVCFGRFDLIRMFLEIQIQAAFADGSLHPNEREVLYVIAEELGISRVQFDQFLRMMQGGAQFGGGYHQQSGGGWQQAQRGPTLEDACNVLGVKTTDDATTIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKQKAQEIQKAYELIKEQKGFK
>NZ_CP019192.1|WP_000525196.1|3699221_3699881_+|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA
MGMENYNPPQEPWLVILYQDEHIMVVNKPSGLLSVPGRLEAHKDSIMTRIQRDYPQAESVHRLDMATSGVIVVALTKAAERELKRQFREREPKKQYVARVWGHPSPAEGLVDLPLICDWPNRPKQKVCYETGKPAQTEYNVVEFAADNTARVVLKPITGRSHQLRVHMLALGHPILGDRFYASPEALSLAPRLQLHAEMLTITHPAYGNSMTFKVPADF
>NZ_CP019192.1|WP_001116966.1|3696303_3699210_+|RNA-polymerase-associated-protein-RapA
MPFTLGQRWISDTESELGLGTVVAMDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDTITSHEGWQLHIDEVKEENGLLVYVGTRLDTEETNVTLREVLLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKFQSEQYRMPYSGLRGQRTNLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYTEAQHDAYNPFETEQLVICSLDFARRNKQRLEHLCDAEWDLLVVDEAHHLVWSTDAPSREYMAIEQLAERVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFEQFVEEQKNYRPVADAVAMLLAGNKLSNDELNRLGDLIGEQDIEPLLQAANSDRDDAQAARDELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTVKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPEQIYQEFEGDTGTWWNFDPRVEWLMGYLTSHRSQKVLVICAKATTALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASNLVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRAIYDSAYASLINYLAAPEETDGFDDLIKSCREQHEALKAQLEQGRDRLLEIHSNGGEKAQQLAQSIEEQDDDTNLIAFAMNLFDIVGINQDDRGDNLIVLTPSDHMLVPDFPGLPEDGCTITFERDVALSREDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELVYVVEAQAPKQLQLNRFLPPTPVRMLLDKNGNNLAAQVEFETFNRQLSAVNRHTGSKLVNAVQQDVHAILQLGETQIEKSARALIDNARREADEKLSGELSRLEALRAVNPNIRDDELAAIDSNRQQVLESLNQAGWRLDALRLIVVTHQ
>NZ_CP019192.1|WP_023207364.1|3693778_3696130_+|DNA-polymerase-II
MAQAGFILTRHWRDTPQGTEVSFWLATDNGPVQATLAPQESVAFIPTSQTSRAASLLQAEKDYRLTPLQLRDFHRQPVSGLYCRTHRQLMRMEKLLRENGVTVYEADVRPPERYLMERFITSPVWVDGEMRNGVIRNARLKPHPDYRPPLKWVSLDIETTRHGELYCIGLEGCGQRTVYMLGPANGDDRQLDFELVYVASRPQLLEKLNAWFTEHDPDVIIGWNVVQFDLRMLQKHAERYRIPLRLGRDNSELEWREHGFKNGVFFAQARGRVIIDGIDALKSAFWNFSSFSLEAVSQELLGEGKSIDNPWDRMDEIDRRFAQDKPALATYNLKDCELVTRIFHKTEIMPFLLERATINGLPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPLASPGGYVMDSQPGLYDSVLVLDYKSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVSQIWHGRDEAKRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHAIMRQTKALIEAQGYDVIYGDTDSTFVWLRRAHSEADAAEIGHRLVRHVNEWWAQTLQQQNLTSALELEFETHFCRFLMPTIRGADTGSKKRYAGLIQEGDSQRMVFKGLETVRTDWTPLAQRFQQELYLRVFRNEPYQDYVRETIDKLMAGELDAQLVYRKRLRRPLHEYQRNIPPHVRAARLADEQNLKRGRPAQYQNRGAIKYVWTVNGPEPVDYQQSPLDYEHYLTRQLQPVAEGILPFVEDNFATLLTGQLGLF
>NZ_CP019192.1|WP_000624379.1|3707876_3708356_-|type-3-dihydrofolate-reductase
MISLIAALAVDRVIGMENAMPWNLPADLAWFKRNTLNKPVVMGRHTWESIGRPLPGRKNIVISSQPGTDDRVQWVKSVDEAIAACGDAPEIMVIGGGRVYEQFLPKAQKLYLTHIDAEVEGDTHFPDYEPDDWESVFSEFHDADAQNSHSYCFEILERR
>NZ_CP019192.1|WP_001642463.1|3708554_3710417_-|glutathione-regulated-potassium-efflux-system-protein-KefC
MDSHTLLQALIYLGSAALIVPIAVRLGLGSVLGYLIAGCIIGPWGLRLVTDAESILHFAEIGVVLMLFVIGLELDPQRLWKLRASVFGGGALQMVVCGGLIGLFCMFLGLRWQVAELIGMTLALSSTAIAMQAMNERNLTVSQVGRSAFAVLLFQDIAAIPLVAMIPLLAASGASTTLGAFALSALKVAGALALVVLLGRYVTRPALRFVARSGLREVFSAVALFLVFGFGLLLEDVGLSMAMGAFLAGVLLASSEYRHALESDIEPFKGLLLGLFFIGVGMSIDFGTLVENPLRILLLLAGFLAIKIVMLWLVARPLGVPAKQRRWFAVLLGQGSEFAFVVFGAAQMAGVLEPEWAKALTLAVALSMAATPIFLVLLTRMEKTATGEAREADEIDEEQPRVIVAGFGRFGQIAGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDDPQTNLQLSELVRSHFPHLQIIARARDVDHYIRLRQAGVAMPERETFEGALKSGRQALEALGLGRYEARERADLFRHFNTRMVEEMAKGENDPLSRAAAYKRTSAMLSEIITEDREHLSLIQRHGWQGTAEGKHSGEVADEPEVKPSI
>NZ_CP019192.1|WP_000600710.1|3710409_3710940_-|glutathione-regulated-potassium-efflux-system-oxidoreductase-KefF
MILIIYAHPYPHHSHANKRMLEQAGTLENVEIRSLYHLYPDFNIDVAAEQEALSRASLIVWQHPMQWYSVPPLLKLWMDKVLTHGWAYGHGGTALHGKHLLWAVTTGGGENHFTIGSHPGFDVLSQPLQATALYCGLKWLPPFAMHCTFICDDDTLQAQARQYKQRLLAWQEVNHG
>NZ_CP019192.1|WP_000066328.1|3711492_3713382_-|sulfatase-like-hydrolase/transferase
MSNKKNLSTEETDLTRRKLLTSAGILAAGGMLSGAVKADEKCAVKAKPAWDKPFTGEIPEKLPEGYNILLVVTDQERFFPTFPFPVPGRERLMKTGVTFCNHQNTSNVCTPSRSVLYTGLHMPQTKMFDNLGLPWMPYDLDPALGTTGHMMRELGYYTAYKGKWHLTEKLEKPLPDEKDEDIDVGDIPEPELHKIMEKYGFADYHGIGDIIGHSKGGYFYDSTTTAQTINWLRCKGQPLNDQHKPWFLAVNLVNPHDVMFIDTDKEGEKVQWRGELDQDDNTLAPTQPPENELYQASWPNYPLPANRHQSFNEQGRPPAHLEYQTARAALEGQFPDEDRRWRKLLDYYFNCIRDCDTHLDRILNELDALKLTDKTIVVFTADHGELGGSHQMHGKGASVYKEQIHVPMIISHPAYPGNKKCQALTCHLDIAPTLVGLTGLPEEKQHQALGNRKGVNFSGLLKNPEGVAVNAVRNASLYCYGMILYTDAHYLHRVIALQRDKQKTVAQIKQEISHLHPDFSHRSGTRMINDGRYKFARYFSLREHNTPETWEDLIKYNDLELYDLKNDPDENHNLAADKQKYQDLILTMNEKLNKIIKDEIGVDDGSFMPDAAHEPWDLTIEQFNRMAKD
>NZ_CP019192.1|WP_000710534.1|3714280_3714571_+|DUF1471-domain-containing-protein
MKKCIIAAALLATVASFSTLAAEQVSKQEISHFKLVKVGTINVSQSGGQISSPTDLREKLSALADAKGGKYYHIIAAREHGPNFEAVAEVYNDATK
>NZ_CP019192.1|WP_162272377.1|3714794_3715211_-|hypothetical-protein
MKLIPFYFLALFSAASGATEINACKDLIGTWKTTADNPTYTMTILPPVEGCGEKCVKLNVQYELDVTHRNALYCHEGQEGVKGQGPMVIAFEGAYGGHAIGTYNRQLQLLWAGVIPKNKKGKWITKMENYWFRQVKAH
>NZ_CP019192.1|WP_001172089.1|3715502_3715733_-|YgdI/YgdR-family-lipoprotein
MQKRLMTALFTAATLFTVAGCSSNQAVETTDGKTIVTDGKPEVDNDTGMVSYKNAATGKTEQINRDQLKNMSELDN
>NZ_CP019192.1|WP_024146592.1|3715821_3717162_-|MFS-transporter
MQQPRNFDDLKFSSIHRRIMLWGSGGPFLDGYVLVIIGVALEQLTPLLHLDAEWIGALGAATLAGLFIGTSLFGYICDKVGRRKMFLLDIIAIGVISVATMFVSTPLELLVMRVLIGIVIGADYPIATSMITEFSNTRQRAFSIGFIAAMWYVGATCANLVGYWLYNMEGGWRWMLGSAFIPCLIILIGRFDLPESPRWLLRKGRVKECEQMMIKLFGEPVCFDDEPPQETRFLQLFNRRHFPFVLFVAAIWTCQVIPMFAIYTFGPQIVGLLGWEQGRNAALGNVVISLFFMLGCIPAMFWLNSIGRRPLLIGSFAMMTIALALLGLVSNLGIILVVVAFAVYAFFSGGPGILQWLYPNELFPTDIRASAVGVIMSLSRIGTIVSTWALPIFITRYGINNVMLIGALISLVGLGVSVMFAPETRGLTLTQTGNMTLRGTPSDNPH
>NZ_CP019192.1|WP_000203736.1|3717308_3717596_-|ferredoxin-like-protein-FixX
MTSPVNVDVKLGVNKFNVDEDSPHIILKTDPDKQALEVLIKACPAGLYKKQDDGSVRFDYAGCLECGTCRILGLDTALEKWEYPRGTFGVEFRYG
>NZ_CP019192.1|WP_001287763.1|3717592_3718879_-|FAD-dependent-oxidoreductase
MSEDIFDAIIVGAGLAGSVAALVLAREGAQVLVIERGNSAGAKNVTGGRLYAHSLERIIPGFADQAPIERMITHEKLAFMTDKGAMTMDYCNGEDAASSQVSYSVLRSKFDAWLMEQAEEAGAQLITGIRVDNVVQRDGNVVGVEADGDILEAKVVILADGVNSLLAEKLGMAKRVEASHVAVGVKELIELPKSVIEDRFQLQGNEGAACLFAGAPTDGLMGGGFLYTNETTLSLGLVCGLHHLKDAKKSVPQMLEDFKQHPAVAPLIAGGKLVEYAAHVVPEAGMNMQPELVGDGVLIAGDAAGMCMNLGFTIRGMDLAISAGEAAAKTVLSAMKRDDFSKQSLGEYRQHLDEGPMRDMRMYQKLPAFLDNPRMFTAYPEMAVNIARDLFTVDGSAPVPMRKKILRHAKKVGFINLMKDGLKGVTVL

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP019192_2	2.1\|3707755\|27\|NZ_CP019192\|CRISPRCasFinder	3707755-3707781	27	NZ_CP038636	Cupriavidus oxalaticus strain X32 plasmid unnamed1, complete sequence	180996-181022	5	0.815

1. spacer 2.1|3707755|27|NZ_CP019192|CRISPRCasFinder matches to NZ_CP038636 (Cupriavidus oxalaticus strain X32 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.815

atcaggcctacatctggctcaagaatt	CRISPR spacer
acgtggcctccatctggctcaagaatg	Protospacer
*.  ***** ****************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1625239 : 1634410

Enterobacteria_phage(66.67%)

tRNA

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000569166.1\|1625239_1626187_+	ABC transporter ATP-binding protein	F2Y1V5	Organic_Lake_phycodnavirus	3.7e-10	27.8
WP_000824854.1\|1626170_1626902_+	ABC transporter permease	NA	NA	NA	NA
WP_001261696.1\|1626882_1626990_-	protein YohO	NA	NA	NA	NA
WP_001240418.1\|1627049_1627781_-	HTH-type transcriptional regulator MlrA	Q9EYF2	Enterobacteria_phage	4.5e-101	87.9
WP_023207585.1\|1628003_1629689_+	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	1.4e-278	91.1
WP_000598637.1\|1629685_1630405_+	two-component system response regulator BtsR	NA	NA	NA	NA
WP_000950413.1\|1630451_1630919_+	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	3.9e-74	90.3
WP_023137005.1\|1630975_1631506_-	YehR family lipoprotein	NA	NA	NA	NA
WP_000703136.1\|1631677_1632136_-	YehR family lipoprotein	Q9EYF5	Enterobacteria_phage	7.6e-54	73.2
WP_023137006.1\|1632376_1634410_-\|tRNA	methionine--tRNA ligase	A0A1V0SDF2	Indivirus	1.0e-54	27.6

DBSCAN-SWA_2

1701636 : 1707942

Enterobacteria_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_023207415.1\|1701636_1703040_+	colanic acid biosynthesis protein WcaM	A0A291LBB9	Klebsiella_phage	2.3e-21	26.5
WP_000981469.1\|1703217_1704111_+	GalU regulator GalF	A0A127AW70	Bacillus_phage	4.8e-44	42.2
WP_023207414.1\|1704487_1705573_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	6.1e-102	53.9
WP_001023664.1\|1705572_1706472_+	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	1.4e-30	36.3
WP_001645078.1\|1706519_1707398_+	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	3.0e-107	64.1
WP_001645077.1\|1707402_1707942_+	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	2.9e-52	58.5

DBSCAN-SWA_3

1799409 : 1806678

Morganella_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000394197.1\|1799409_1799829_+	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	8.5e-36	60.5
WP_023207907.1\|1799831_1801100_+	Y-family DNA polymerase	I6RSM4	Salmonella_phage	9.9e-229	92.7
WP_000208509.1\|1801554_1801767_+	cold-shock protein	A0A1W6JNX5	Morganella_phage	3.9e-21	70.0
WP_024131109.1\|1801777_1801966_+	hypothetical protein	NA	NA	NA	NA
WP_023207908.1\|1802226_1803438_-	porin	Q1MVN1	Enterobacteria_phage	2.4e-107	55.6
WP_076018265.1\|1804087_1804387_+	hypothetical protein	NA	NA	NA	NA
WP_023207910.1\|1804478_1805174_+	phosphohydrolase	A0A1D6Y7U0	Golden_Marseillevirus	3.6e-07	27.7
WP_001642793.1\|1805247_1806678_+	DNA cytosine methyltransferase	E5E3X6	Burkholderia_phage	1.0e-104	57.4

DBSCAN-SWA_4

1845176 : 1882409

Enterobacteria_phage(67.74%)

integrase,capsid,holin,plate,lysis,head,tail,terminase,portal

attL 1844869:1844924|attR 1882487:1882542

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1844869:1844924	attL	NA	NA	NA	NA
WP_023207917.1\|1845176_1845317_-	Hok/Gef family protein	A0A2R2X2B4	Escherichia_phage	6.8e-06	60.0
WP_023207918.1\|1845474_1845723_-	hypothetical protein	NA	NA	NA	NA
WP_024146651.1\|1845723_1845996_-	ogr/Delta-like zinc finger family protein	NA	NA	NA	NA
WP_076018266.1\|1846041_1847172_-	phage late control D family protein	A0A0A7NQ97	Enterobacteria_phage	7.4e-151	74.2
WP_023207922.1\|1847330_1848518_+\|tail	phage tail sheath family protein	A0A0A7NV69	Enterobacteria_phage	2.2e-185	82.0
WP_000115856.1\|1848518_1849031_+\|tail	phage major tail tube protein	A0A0A7NPV8	Enterobacteria_phage	7.6e-63	68.0
WP_023207923.1\|1849073_1849430_+\|tail	putative tail protein	A0A0A7NPZ0	Enterobacteria_phage	3.4e-17	52.6
WP_024144912.1\|1849429_1849594_+\|tail	GpE family phage tail protein	A0A0A7NQ96	Enterobacteria_phage	2.5e-15	79.6
WP_023207924.1\|1849580_1852526_+\|tail	phage tail tape measure protein	A0A0A7NRZ9	Enterobacteria_phage	1.4e-233	48.6
WP_023207925.1\|1852539_1853028_+\|tail	phage tail protein	A0A0A7NV65	Enterobacteria_phage	3.3e-71	78.9
WP_023207926.1\|1853047_1853422_-	DUF1353 domain-containing protein	I1TQ41	Pseudomonas_phage	3.1e-13	36.6
WP_023207927.1\|1853533_1854205_-	DUF4376 domain-containing protein	S5MBX6	Escherichia_phage	2.5e-77	62.0
WP_023207928.1\|1854218_1856210_-	hypothetical protein	Q6K1H2	Salmonella_virus	2.4e-173	50.2
WP_023207929.1\|1856215_1856743_-\|tail	phage tail protein I	A0A0A7NPV1	Enterobacteria_phage	1.4e-56	61.2
WP_023207930.1\|1856735_1857632_-\|plate	baseplate assembly protein J	A0A0A7NPY5	Enterobacteria_phage	1.2e-106	69.1
WP_000127183.1\|1857618_1857987_-\|plate	baseplate assembly protein	A0A0A7NQ90	Enterobacteria_phage	2.9e-40	71.3
WP_023207931.1\|1857983_1858574_-\|plate	phage baseplate assembly protein V	A0A0A7NRZ3	Enterobacteria_phage	1.7e-69	69.4
WP_023207932.1\|1858570_1859206_-	phage virion morphogenesis protein	A0A0A7NV60	Enterobacteria_phage	2.0e-65	60.3
WP_076018267.1\|1859202_1859679_-\|tail	phage tail protein	A0A0A7NPU6	Enterobacteria_phage	8.4e-40	51.0
WP_023207934.1\|1859665_1860157_-\|lysis	lysis protein	S4TNN7	Salmonella_phage	9.3e-34	56.8
WP_023207935.1\|1860163_1860607_-	lysozyme	A0A075B8L0	Enterobacteria_phage	4.8e-45	63.2
WP_001624330.1\|1860603_1860981_-\|holin	phage holin, lambda family	NA	NA	NA	NA
WP_023207936.1\|1860971_1861172_-\|tail	phage tail protein	A0A0A7NV57	Enterobacteria_phage	4.8e-21	78.5
WP_001624329.1\|1861171_1861666_-\|head	head completion/stabilization protein	A0A0A7NPU2	Enterobacteria_phage	3.8e-51	59.5
WP_023207937.1\|1861767_1862598_-\|terminase	terminase small subunit	A0A0A7NPX9	Enterobacteria_phage	4.8e-91	65.8
WP_023207938.1\|1862644_1863730_-\|capsid	phage major capsid protein, P2 family	A0A0A7NQ82	Enterobacteria_phage	2.2e-136	68.1
WP_023207939.1\|1863753_1864590_-\|capsid	GPO family capsid scaffolding protein	A0A0A7NRY7	Enterobacteria_phage	5.7e-100	65.5
WP_023207940.1\|1864746_1866501_+	helix-turn-helix domain-containing protein	A0A0A7NV54	Enterobacteria_phage	3.2e-262	76.2
WP_023207941.1\|1866500_1867550_+\|portal	phage portal protein	A0A0A7NPT9	Enterobacteria_phage	4.3e-153	73.9
WP_023207942.1\|1868018_1868396_-	type II toxin-antitoxin system YafO family toxin	NA	NA	NA	NA
WP_023207943.1\|1868399_1869020_-	hypothetical protein	NA	NA	NA	NA
WP_023207945.1\|1869431_1869851_-	hypothetical protein	NA	NA	NA	NA
WP_078048689.1\|1869843_1872228_-	replication protein	A0A0M4RTM8	Salmonella_phage	4.2e-172	48.3
WP_023207948.1\|1873358_1873898_-	hypothetical protein	A0A2I7RQG9	Vibrio_phage	1.4e-06	41.8
WP_023207949.1\|1873894_1874827_-	Dam family site-specific DNA-(adenine-N6)-methyltransferase	A0A0M4QWR0	Salmonella_phage	3.3e-64	48.4
WP_023170325.1\|1874823_1875102_-	hypothetical protein	NA	NA	NA	NA
WP_023207950.1\|1875098_1875632_-	hypothetical protein	NA	NA	NA	NA
WP_023207951.1\|1875619_1875877_-	hypothetical protein	NA	NA	NA	NA
WP_001624305.1\|1875873_1876314_-	hypothetical protein	NA	NA	NA	NA
WP_023207952.1\|1876389_1876581_-	hypothetical protein	NA	NA	NA	NA
WP_023207953.1\|1876577_1876754_-	LapA family protein	NA	NA	NA	NA
WP_023207954.1\|1876758_1877001_-	hypothetical protein	NA	NA	NA	NA
WP_023207955.1\|1877070_1877949_-	hypothetical protein	NA	NA	NA	NA
WP_023207956.1\|1878066_1878249_+	hypothetical protein	NA	NA	NA	NA
WP_023207957.1\|1878245_1878656_-	hypothetical protein	NA	NA	NA	NA
WP_023207958.1\|1878909_1879113_-	hypothetical protein	NA	NA	NA	NA
WP_023207959.1\|1879109_1879316_-	hypothetical protein	NA	NA	NA	NA
WP_023207960.1\|1879393_1879777_+	helix-turn-helix domain-containing protein	Q6QID2	Burkholderia_phage	1.4e-21	55.5
WP_023207961.1\|1879799_1880471_+	hypothetical protein	NA	NA	NA	NA
WP_023207962.1\|1880487_1881387_+	hypothetical protein	NA	NA	NA	NA
WP_023207963.1\|1881383_1882409_+\|integrase	tyrosine-type recombinase/integrase	Q94N03	Haemophilus_virus	5.4e-108	60.3
1882487:1882542	attR	NA	NA	NA	NA

DBSCAN-SWA_5

2130335 : 2136997

Salmonella_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000230462.1\|2130335_2131142_-	peptide ABC transporter ATP-binding protein SapF	G3M9Y6	Bacillus_virus	4.6e-14	27.4
WP_001128869.1\|2131143_2132136_-	peptide ABC transporter ATP-binding protein SapD	NA	NA	NA	NA
WP_001146150.1\|2132135_2133026_-	peptide ABC transporter permease SapC	NA	NA	NA	NA
WP_001605114.1\|2133848_2134571_-	hypothetical protein	A0A0P0ZCT1	Stx2-converting_phage	4.3e-35	38.9
WP_001096568.1\|2135041_2135224_+	hypothetical protein	S4TSR3	Salmonella_phage	1.0e-22	77.6
WP_071786811.1\|2135473_2135614_+	pertussis toxin subunit	A0A0U2KD26	Escherichia_phage	2.5e-08	74.3
WP_001605118.1\|2135652_2135952_+	putative pertussis-like toxin subunit	A0A0U2KD26	Escherichia_phage	3.2e-13	54.3
WP_000727928.1\|2135878_2136304_+	peptidase	NA	NA	NA	NA
WP_077905325.1\|2136682_2136997_+	recombinase family protein	A0A1S6L009	Salmonella_phage	4.3e-40	86.1

DBSCAN-SWA_6

2604682 : 2612958

Escherichia_phage(42.86%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000497451.1\|2604682_2604922_+	virulence protein MsgA	K7P6H1	Enterobacteria_phage	8.5e-33	88.6
WP_023208248.1\|2605132_2605297_-	hypothetical protein	NA	NA	NA	NA
WP_001529135.1\|2605794_2606604_+	cytolethal distending toxin S-CDT	A5LH53	Enterobacteria_phage	2.1e-62	50.0
WP_001277616.1\|2606676_2607054_+	DUF1353 domain-containing protein	I1TQ41	Pseudomonas_phage	2.2e-14	38.4
WP_000158845.1\|2607201_2607744_-	glycoside hydrolase family 108 protein	A0A0U2S643	Escherichia_phage	6.2e-71	67.0
WP_000733630.1\|2607927_2608656_-	pertussis-like toxin subunit ArtA	A0A0U2KD26	Escherichia_phage	1.6e-61	52.5
WP_000275698.1\|2608672_2609086_-	subtilase cytotoxin subunit B	A0A0U2KD34	Escherichia_phage	5.5e-19	37.7
WP_023196912.1\|2610136_2611261_-	type III secretion system effector SopF	NA	NA	NA	NA
WP_000444508.1\|2611707_2612958_-	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	1.1e-19	92.6

DBSCAN-SWA_7

3417105 : 3422932

Enterobacteria_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_023208153.1\|3417105_3419439_-	bacteriophage P4 DNA primase	Q7M2A8	Enterobacteria_phage	0.0e+00	84.4
WP_023208154.1\|3419453_3419774_-	DUF5375 domain-containing protein	NA	NA	NA	NA
WP_023208155.1\|3419770_3419998_-	hypothetical protein	NA	NA	NA	NA
WP_065304952.1\|3419994_3420546_-	ash family protein	Q7M2A7	Enterobacteria_phage	2.5e-35	66.4
WP_023208157.1\|3420542_3420809_-	AlpA family transcriptional regulator	Q7M299	Enterobacteria_phage	2.3e-31	71.6
WP_162272376.1\|3420913_3421051_+	hypothetical protein	NA	NA	NA	NA
WP_023208158.1\|3421369_3422107_+	hypothetical protein	Q7M2A2	Enterobacteria_phage	7.6e-80	64.4
WP_023208159.1\|3422103_3422349_+	hypothetical protein	Q7M294	Enterobacteria_phage	2.2e-31	77.8
WP_023208160.1\|3422365_3422932_+	hypothetical protein	Q7M2A1	Enterobacteria_phage	1.1e-54	61.6

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP019192

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection