CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP019185	Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 11511 chromosome, complete genome	3 crisprs	PD-DExK,WYL,cas3,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,DEDDh,DinG,c2c9_V-U4	0	5	9	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP019185_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019185_1

572086-572186

Orphan

Consensus_repeat	Method
GCTTCAGTGGCGAACGTCGTGAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP019185_1

>merge|NZ_CP019185|1|572086-572186|CRISPRCasFinder
GCTTCAGTGGCGAACGTCGTGAAGGCGGTCGTAATTTCAGCGGCGAACGTCGTGAAGGTGGTCGTGGTGATGGTCGTCGCTTCAGCGGCGAACGTCGTGAA

>NZ_CP019185|1|1|572086-572186|CRISPRCasFinder
GCTTCAGTGGCGAACGTCGTGAA	GGCGGTCGTAATTTCAGCGGCGAACGTCGTGAAGGTGGTCGTGGTGATGGTCGTC
GCTTCAGCGGCGAACGTCGTGAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019185.1\|WP_000037599.1\|578803_579322_-\|protein/nucleic-acid-deglycase	unknown	unknown	gnl\|CDD\|153228
NZ_CP019185.1\|WP_000131177.1\|562142_564821_+\|translation-initiation-factor-IF-2	unknown	unknown	gnl\|CDD\|235401
NZ_CP019185.1\|WP_001670767.1\|567048_569184_+\|polyribonucleotide-nucleotidyltransferase	unknown	unknown	gnl\|CDD\|236995
NZ_CP019185.1\|WP_000380409.1\|578380_578824_+\|YhbP-family-protein	unknown	unknown	gnl\|CDD\|235127
NZ_CP019185.1\|WP_001040208.1\|565041_565443_+\|30S-ribosome-binding-factor-RbfA	unknown	unknown	gnl\|CDD\|234787
NZ_CP019185.1\|WP_000059465.1\|566537_566807_+\|30S-ribosomal-protein-S15	unknown	unknown	gnl\|CDD\|180170
NZ_CP019185.1\|WP_000207645.1\|558164_559508_-\|argininosuccinate-synthase	unknown	unknown	gnl\|CDD\|235434
NZ_CP019185.1\|WP_000089675.1\|565442_566387_+\|tRNA-pseudouridine(55)-synthase-TruB	unknown	unknown	gnl\|CDD\|235333
NZ_CP019185.1\|WP_000884721.1\|577017_577542_+\|SCP2-domain-containing-protein	unknown	unknown	gnl\|CDD\|225696
NZ_CP019185.1\|WP_000802069.1\|569293_570178_+\|lipoprotein-NlpI	unknown	unknown	gnl\|CDD\|236875
NZ_CP019185.1\|WP_001031038.1\|560615_562118_+\|transcription-termination/antitermination-protein-NusA	unknown	unknown	gnl\|CDD\|236410
NZ_CP019185.1\|WP_000224390.1\|572399_573644_+\|tryptophan-permease	unknown	unknown	gnl\|CDD\|182492
NZ_CP019185.1\|WP_000643280.1\|580154_580730_-\|divisome-associated-lipoprotein-YraP	unknown	unknown	gnl\|CDD\|182907
NZ_CP019185.1\|WP_077905015.1\|574918_575815_-\|U32-family-peptidase	unknown	unknown	gnl\|CDD\|237968
NZ_CP019185.1\|WP_000908562.1\|577535_578039_+\|N-acetyltransferase	unknown	unknown	gnl\|CDD\|225695
NZ_CP019185.1\|WP_000928379.1\|578025_578343_-\|GIY-YIG-nuclease-family-protein	unknown	unknown	gnl\|CDD\|178979
NZ_CP019185.1\|WP_010723222.1\|570283_570364_+\|protein-YrbN	unknown	unknown	gnl\|CDD\|380282
NZ_CP019185.1\|WP_000105461.1\|560135_560588_+\|ribosome-maturation-factor-RimP	unknown	unknown	gnl\|CDD\|234627
NZ_CP019185.1\|WP_000421309.1\|575805_576801_-\|U32-family-peptidase	unknown	unknown	gnl\|CDD\|223896
NZ_CP019185.1\|WP_011233186.1\|579452_580088_+\|NAD(P)H-binding-protein	unknown	unknown	gnl\|CDD\|187560

Protein	Function_ID	Function_description	E-value
NZ_CP019185.1\|WP_000037599.1\|578803_579322_-\|protein/nucleic-acid-deglycase	gnl\|CDD\|153228	cd03134, GATase1_PfpI_like, A type 1 glutamine amidotransferase (GATase1)-like domain found in PfpI from Pyrococcus furiosus. A type 1 glutamine amidotransferase (GATase1)-like domain found in PfpI from Pyrococcus furiosus. This group includes proteins similar to PfpI from P. furiosus. and PH1704 from Pyrococcus horikoshii. These enzymes are ATP-independent intracellular proteases and may hydrolyze small peptides to provide a nutritional source. Only Cys of the catalytic triad typical of GATase1 domains is conserved in this group. This Cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. For PH1704, it is believed that this Cys together with a different His in one monomer and Glu (from an adjacent monomer) forms a different catalytic triad from the typical GATase1domain. PfpI is homooligomeric. Protease activity is only found for oligomeric forms of PH1704.	5.12939e-86
NZ_CP019185.1\|WP_000131177.1\|562142_564821_+\|translation-initiation-factor-IF-2	gnl\|CDD\|235401	PRK05306, infB, translation initiation factor IF-2; Validated.	0
NZ_CP019185.1\|WP_001670767.1\|567048_569184_+\|polyribonucleotide-nucleotidyltransferase	gnl\|CDD\|236995	PRK11824, PRK11824, polynucleotide phosphorylase/polyadenylase; Provisional.	0
NZ_CP019185.1\|WP_000380409.1\|578380_578824_+\|YhbP-family-protein	gnl\|CDD\|235127	PRK03467, PRK03467, hypothetical protein; Provisional.	3.78925e-99
NZ_CP019185.1\|WP_001040208.1\|565041_565443_+\|30S-ribosome-binding-factor-RbfA	gnl\|CDD\|234787	PRK00521, rbfA, 30S ribosome-binding factor RbfA.	2.271e-52
NZ_CP019185.1\|WP_000059465.1\|566537_566807_+\|30S-ribosomal-protein-S15	gnl\|CDD\|180170	PRK05626, rpsO, 30S ribosomal protein S15; Reviewed.	7.70279e-54
NZ_CP019185.1\|WP_000207645.1\|558164_559508_-\|argininosuccinate-synthase	gnl\|CDD\|235434	PRK05370, PRK05370, argininosuccinate synthase; Validated.	0
NZ_CP019185.1\|WP_000089675.1\|565442_566387_+\|tRNA-pseudouridine(55)-synthase-TruB	gnl\|CDD\|235333	PRK05033, truB, tRNA pseudouridine synthase B; Provisional.	0
NZ_CP019185.1\|WP_000884721.1\|577017_577542_+\|SCP2-domain-containing-protein	gnl\|CDD\|225696	COG3154, COG3154, Putative lipid carrier protein [Lipid metabolism].	1.82299e-84
NZ_CP019185.1\|WP_000802069.1\|569293_570178_+\|lipoprotein-NlpI	gnl\|CDD\|236875	PRK11189, PRK11189, lipoprotein NlpI; Provisional.	0
NZ_CP019185.1\|WP_001031038.1\|560615_562118_+\|transcription-termination/antitermination-protein-NusA	gnl\|CDD\|236410	PRK09202, nusA, transcription elongation factor NusA; Validated.	0
NZ_CP019185.1\|WP_000224390.1\|572399_573644_+\|tryptophan-permease	gnl\|CDD\|182492	PRK10483, PRK10483, tryptophan permease; Provisional.	0
NZ_CP019185.1\|WP_000643280.1\|580154_580730_-\|divisome-associated-lipoprotein-YraP	gnl\|CDD\|182907	PRK11023, PRK11023, divisome-associated lipoprotein YraP.	8.64374e-120
NZ_CP019185.1\|WP_077905015.1\|574918_575815_-\|U32-family-peptidase	gnl\|CDD\|237968	PRK15447, PRK15447, putative protease; Provisional.	0
NZ_CP019185.1\|WP_000908562.1\|577535_578039_+\|N-acetyltransferase	gnl\|CDD\|225695	COG3153, COG3153, Predicted acetyltransferase [General function prediction only].	7.2703e-63
NZ_CP019185.1\|WP_000928379.1\|578025_578343_-\|GIY-YIG-nuclease-family-protein	gnl\|CDD\|178979	PRK00329, PRK00329, GIY-YIG nuclease superfamily protein; Validated.	4.3214e-44
NZ_CP019185.1\|WP_010723222.1\|570283_570364_+\|protein-YrbN	gnl\|CDD\|380282	NF033440, small_YrbN, protein YrbN. YrbN, a small protein of only 26 amino acids, is found in at least these genera: Escherichia, Salmonella, Enterobacter, Klebsiella, and Yersinia. It is known to be expressed in E. coli.	1.66225e-08
NZ_CP019185.1\|WP_000105461.1\|560135_560588_+\|ribosome-maturation-factor-RimP	gnl\|CDD\|234627	PRK00092, PRK00092, ribosome maturation protein RimP; Reviewed.	4.39218e-79
NZ_CP019185.1\|WP_000421309.1\|575805_576801_-\|U32-family-peptidase	gnl\|CDD\|223896	COG0826, COG0826, Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones].	3.77757e-116
NZ_CP019185.1\|WP_011233186.1\|579452_580088_+\|NAD(P)H-binding-protein	gnl\|CDD\|187560	cd05250, CC3_like_SDR_a, CC3(TIP30)-like, atypical (a) SDRs. Atypical SDRs in this subgroup include CC3 (also known as TIP30) which is implicated in tumor suppression. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine rich NAD(P)-binding motif that resembles the extended SDRs, and have an active site triad of the SDRs (YXXXK and upstream Ser), although the upstream Asn of the usual SDR active site is substituted with Asp. For CC3, the Tyr of the triad is displaced compared to the usual SDRs and the protein is monomeric, both these observations suggest that the usual SDR catalytic activity is not present. NADP appears to serve an important role as a ligand, and may be important in the interaction with other macromolecules. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	9.72509e-69

>NZ_CP019185.1|WP_010723222.1|570283_570364_+|protein-YrbN
MKIADQFHDELCRLAAINFEAHVLHG
>NZ_CP019185.1|WP_000802069.1|569293_570178_+|lipoprotein-NlpI
MKPFLRWCFVATALTLAGCSNSAWRKSEVLAVPLQPTLQQEVILARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDPYRSLWLYLVEQKLNEKQAKEALKARFEKSDKEQWGWNIVEFYLGDISEATLMERLKADATDNTSLAEHLSETNFYLGKYYLSLGDLDSATALFKLAVANNVHNFVEHRYALLELSLLGQDQDDLAESDQQ
>NZ_CP019185.1|WP_001670767.1|567048_569184_+|polyribonucleotide-nucleotidyltransferase
MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGQKKAKPGQDFFPLTVNYQERTYAAGRIPGSFFRREGRPSEGETLIARLIDRPVRPLFPEGFVNEVQVIATVVSVNPQVNPDIVAMIGASAALSLSGIPFNGPIGAARVGYINDQYVLNPTQDELKESKLDLVVAGTEAAVLMVESEAELLSEDTMLGAVVFGHEQQQVVIQAINDLVKEAGKPRWDWQPEAVNDALNARVAALAESRLSDAYRITDKQERYAQVDVIKSETIEQLIAEDETLDANELGEILHAIEKNVVRSRVLAGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTARDAQVLDELMGERTDSFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPDMDKFPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEGDNYVVLSDILGDEDHLGDMDFKVAGSRDGISALQMDIKIEGITKEIMQVALNQAKGARLHILGVMEQAINAPRGDISEFAPRIHTIKISTDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAATDGEKAKYAIRRIEEITAEIEVGRIYNGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVEKVTDYLQMGQEVPVKVLEVDRQGRVRLSIKEATEQSQPAAAPEAPASEQAE
>NZ_CP019185.1|WP_000059465.1|566537_566807_+|30S-ribosomal-protein-S15
MSLSTEATAKIVSEFGRDANDTGSTDVQVALLTAQINHLQGHFAEHKKDHHSRRGLLRMVSQRRKLLDYLKRKDVARYTALIERLGLRR
>NZ_CP019185.1|WP_000089675.1|565442_566387_+|tRNA-pseudouridine(55)-synthase-TruB
MSRPRRRGRDIHGVLLLDKPQGMSSNDVLQKVKRIYNANRAGHTGALDPLATGMLPICLGEATKFSQYLLDSDKRYRVIARLGQRTDTSDADGQIVQERPVTFSAEQLASALETFRGDIEQIPSMYSALKYQGKKLYEYARQGIEVPREARPITVYELLFIRHEGNELELEVHCSKGTYIRTIIDDLGEKLGCGAHVTYLRRLTVSKYPVDRMVTLEHLQTLVAQAEQQGVPAAQWLDPLLMPMDSPASDYPVVNLPLTSSVYFKNGNPVRTTGAPLKGLVRVTEGEDDKFIGMGEIDDEGRVAPRRLVVEYPA
>NZ_CP019185.1|WP_001040208.1|565041_565443_+|30S-ribosome-binding-factor-RbfA
MAKEFGRPQRVAQEMQKEIALILQREIKDPRVGMMTTVSGVEMSRDLAYAKVFVTFLNDQDEAAVKNGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTNVVKHDEERRVNPDDSKED
>NZ_CP019185.1|WP_000131177.1|562142_564821_+|translation-initiation-factor-IF-2
MTDLTLKALAAERQVSVDRLVQQFADAGIRKSADDSVSAQEKQTLLAHLNREAVSGPDKLTLQRKTRSTLNIPGTGGKSKSVQIEVRKKRTFVKRDPQEAERLAAEEQAQREAEEQARREAEEQAKREAQQKAEREAAEQAKREAAEKAKREAAEKDKVSNQQTDDMTKTAQAEKARRENEAAELKRKAEEEARRKLEEEARRVAEEARRMAEENKWTATPEPVEDTSDYHVTTSQHARQAEDENDREVEGGRGRGRNAKAARPAKKGKHAESKADREEARAAVRGGKGGKRKGSSLQQGFQKPAQAVNRDVVIGETITVGELANKMAVKGSQVIKAMMKLGAMVTINQVIDQETAQLVAEEMGHKVILRRENELEEAVMSDRDTGAAAEPRAPVVTIMGHVDHGKTSLLDYIRSTKVASGEAGGITQHIGAYHVETDNGMITFLDTPGHAAFTSMRARGAQATDIVVLVVAADDGVMPQTIEAIQHAKAAGVPVVVAVNKIDKPEADPDRVKNELSQYGILPEEWGGESQFVHVSAKAGTGIDELLDAILLQAEVLELKAVRKGMASGAVIESFLDKGRGPVATVLVREGTLHKGDIVLCGFEYGRVRAMRNELGQEVLEAGPSIPVEILGLSGVPAAGDEVTVVRDEKKAREVALYRQGKFREVKLARQQKSKLENMFANMTEGEVHEVNIVLKADVQGSVEAISDSLLKLSTDEVKVKIIGSGVGGITETDATLAAASNAILVGFNVRADASARKVIEFESLDLRYYSVIYNLIDEVKAAMSGMLSPELKQQIIGLAEVRDVFKSPKFGAIAGCMVTEGTIKRHNPIRVLRDNVVIYEGELESLRRFKDDVNEVRNGMECGIGVKNYNDVRVGDMIEVFEIIEIQRTIA
>NZ_CP019185.1|WP_001031038.1|560615_562118_+|transcription-termination/antitermination-protein-NusA
MNKEILAVVEAVSNEKALPREKIFEALESALATATKKKYEQEIDVRVEIDRKSGDFDTFRRWLIVEEVTMPTKEITLEAARFEDESLNVGDYVEDQIESVTFDRITTQTAKQVIVQKVREAERAMVVDQFRDQEGEIVTGVVKKVNRDNISLEIKSEGMAGNAEAVILREDMLPRENFRPGDRIRGVLYAVRPEARGAQLFVTRSKPEMLIELFRIEVPEIGEEVIEIKAAARDPGSRAKIAVKTNDKRIDPVGACVGMRGARVQAVSTELGGERIDIVLWDDNPAQFVINAMAPADVASIVVDEDKHTMDIAVEAGNLAQAIGRNGQNVRLASQLSGWELNVMTVDDLQAKHQAEAHAAIEIFTKYLDIDEEFATVLVEEGFSTLEELAYVPMKELLEIDGLDEPTVEALRERAKNALATLAQDQEASLGDNKPADDLLNLEGLDRDMAFKLAARGVCTLEDLADQGIDDLADIEGLTDEKAGELIMAARNICWFGDEA
>NZ_CP019185.1|WP_000105461.1|560135_560588_+|ribosome-maturation-factor-RimP
MSTLEQKLTEMITAPVEALGYELVGIEFIRGRTSTLRIYIDSEDGINVDDCADVSHQVSAVLDVEDPISVAYNLEVSSPGLDRPMFTADHYARFQGEEVALVLRMAVQNRRKWQGIIKAVDGEMITVTVEGKDEVFALSNIQKANLVPHF
>NZ_CP019185.1|WP_000207645.1|558164_559508_-|argininosuccinate-synthase
MTTILKHLPAGQRIGIAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEDDYDAIPRRAMEYGAENARLIDCRKQLVAEGIAAIQCGAFHNTTGGLTYFNTTPLGRAVTGTMLVAAMKEDGVNIWGDGSTYKGNDIERFYRYGLLTNAELQIYKPWLDTDFIDELGGRHEMSEFMIACGFDYKMSVEKAYSTDSNMLGATHEAKDLEFLNSSVKIVNPIMGVKFWDESVKIPAEEVTVRFEQGHPVALNGKTFSDDVEMMLEANRIGGRHGLGMSDQIENRIIEAKSRGIYEAPGMALLHIAYERLLTGIHNEDTIEQYHSHGRQLGKLLYQGRWFDSQALMLRDGLQRWVASQITGEVTLELRRGNDYSILNTVSDNLTYKAERLTMEKGESVFSPDDRIGQLTMRNLDITDTREKLFGYAKAGLLTASSATGLPQVENLENKAK
>NZ_CP019185.1|WP_000224390.1|572399_573644_+|tryptophan-permease
MATLTTTQTSPSLLGGVVIIGGTIIGAGMFSLPVVMSGAWFFWSMAALVFTWFCMLHSGLMILEANLNYRIGSSFDTITKDLLGKGWNVVNGISIAFVLYILTYAYISASGSILHHTFAEMSLNVPARAAGFAFALLVAFVVWLSTKAVSRMTAIVLGAKVITFFLTFGSLLGHVQPTTLFNVAESHASYTPYLLMTLPFCLASFGYHGNVPSLMKYYGKDPRTIVKCLIYGTLLALALYSVWLLGTMGNIPRPEFIGIAQKGGNIDVLVQALSGVLNSRSLDLLLVVFSNFAVASSFLGVTLGLFDYLADLFGFDDSAMGRFKTALLTFLPPMIGGLLYPNGFLYAIGYAGLAATIWAAIVPALLARKSRERFGSPKFRVWGGKPMIALILVFGVGNAVIHILSSFNLLPVYQ
>NZ_CP019185.1|WP_077905015.1|574918_575815_-|U32-family-peptidase
MAVRGAMKYSLGPVLYYWPKETLEDFYQQAAKSSADVIYLGEAVCSKRRATKVGDWLEMAKSLAASGKQVALSTLALVQASSELSELKRYVDNGDFLLEASDLGVVNLCAERKLPFVAGHALNCYNAVTLRRLLKEGMVRWCMPVELSRDWLVNLLNQCDELGIRNQFEVEVLSYGHLPLAYSARCFTARSEDRPKDECETCCIKYPNGRDVLSQENQQVFVLNGIQTMSGYVYNLGNELTSMQGLVDMVRLSPLGTETFAMLDAFRANENGGAPLPLAAHSDCNGYWKRLAGLELQA
>NZ_CP019185.1|WP_000421309.1|575805_576801_-|U32-family-peptidase
MELLCPAGNLPALKAAIENGADAVYIGLKDDTNARHFAGLNFTEKKLQEAVSFVHQHRRKLHIAINTFAHPDGYARWQRAVDMAAQLGADALILADLAMLEYAAERYPHIERHVSVQASATNEEAIRFYHRNFDVHRVVLPRVLSIHQVKQLARVTPVPLEVFAFGSLCIMAEGRCYLSSYLTGESPNTVGACSPARFVRWQQTPQGLESRLNDVLIDRYQDGENAGYPTLCKGRYLVDGERYHALEEPTSLNTLELLPELMAANIASVKIEGRQRSPAYVSQVAKVWRQAIDRCKAAPQNFVPQRDWMETLGAMSEGTQTTLGAYHRKWQ
>NZ_CP019185.1|WP_000884721.1|577017_577542_+|SCP2-domain-containing-protein
MLDKLRSRLVHAGPSLMSVPVKLTPFALKRQVLEQVLSWQFRQALADGELEFLEGRWLSIHVRDIDLKWYTTVENEKLIVSQQADADVSFSADASDLLMIAARKQDPDTLFFQRRLVIEGDTELGLYVKNLMDAIELEQMPKALRVMLLQLADFVEAGMKNSPETKQTSVGEPC
>NZ_CP019185.1|WP_000908562.1|577535_578039_+|N-acetyltransferase
MLIRVEIPIDAPGIDALLRRSFESDAEAKLVHDLREDGFLTLGLVATDDEGQVVGYVAFSPVDVQGEDLQWVGMAPLAVDEKYRGQGLARQLVYEGLDSLNEFGYAAVVTLGDPALYSRFGFELAAHYDLHCRWPGTESAFQVHRLAEDALEGVTGLVEYHDHFNRF
>NZ_CP019185.1|WP_000928379.1|578025_578343_-|GIY-YIG-nuclease-family-protein
MLMATMTPWYLYLIRTADNALYTGITTDVARRYRQHQTGKGAKALRGKGELTLAFAAQVGDRSLALRIEYRIKQLTKRQKERLVTEREAFEALLSSLQTPVLKND
>NZ_CP019185.1|WP_000380409.1|578380_578824_+|YhbP-family-protein
MDTLTAIGRWLAKQHVVTWCVHHEGELWCANAFYLFDAQNVALYLLTDDKTRHAQMSGACASVAGTVNGQPKTVARIRGVQFKGEIRRLEGQESDAARKAYLRRFPVARVLPAPVWEIRLDEIKFTDNTLGFGKKLHWLRDSRAQQA
>NZ_CP019185.1|WP_000037599.1|578803_579322_-|protein/nucleic-acid-deglycase
MSKKIAVLITDEFEDSEFTSPAAEFRQAGHEVITIEKEAGKTVKGKKGEASVTIDKAIDDVRPDEFDALLLPGGHSPDYLRGDSRFVDFTRDFVNSGKPVFAICHGPQLLISADVIRGRKLTAVKPIIIDVKNAGAEFYDQEVVVDKDQLVTSRTPDDLPAFNREALRLLGA
>NZ_CP019185.1|WP_011233186.1|579452_580088_+|NAD(P)H-binding-protein
MSQVLITGATGLVGGHLLRMLINTPQVSAIAAPTRRPLTDIVGVYNPHDPQLTDALAQVTDPVDIVFCCLGTTRREAGSKAAFIYADYTLVVDTALTGRRLGAQHMVVVSAMGANAHSPFFYNRVKGEMEEALIAQNWPRLTIARPSMLLGDRTTRRVNETLFAPLFRLLPGNWKSIDARDVARAMLAEALAPAQEGVTILTSSQLREKAE
>NZ_CP019185.1|WP_000643280.1|580154_580730_-|divisome-associated-lipoprotein-YraP
MKAFSPLAVLISALLLQGCVAAAVVGTAAVGTKAATDPRSVGTQVDDGTLELRVSSALSKDEQIKKETRINVTAYQGKVLLVGQSPNSELSARAKQIAMGVEGTTEVYNEIRQGQPIGLGTASNDTWITTKVRSQLLTSDQVKSSNVKVTTENGEVFLLGLVTEREGKAAADIASRVSGVKRVTTAFTYIK

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Crispr_ID: NZ_CP019185_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019185_2

920042-920253

TypeI-E

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAACCGG	PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRT

3 spacers

cas3,cse2gr11,cas7,cas5,cas6e

The CRISPR arrays of NZ_CP019185_2

>merge|NZ_CP019185|2|920042-920253|PILER-CR,CRISPRCasFinder,CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCGAATTCTTCTCTTTCGTTGAAAAACAGGCCATCGTGTTCCCCGCGCCAGCGGGGATAAACCGGAAGATTTCAAATCACCGGCGCAACTCGAACAGTGTTCCCCGCGCCAGCGGGGATAAACCGGGGATCGCGCTGGCGGTCGCATCCGTTGCCGTGTGTTCCCCGCGCCAGCGGGGATAGCCGT

>NZ_CP019185|2|1|920042-920193|PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCGA	ATTCTTCTCTTTCGTTGAAAAACAGGCCATC
GTGTTCCCCGCGCCAGCGGGGATAAACCGG	AAGATTTCAAATCACCGGCGCAACTCGAACA
GTGTTCCCCGCGCCAGCGGGGATAAACCGG

>NZ_CP019185|2|2|920042-920253|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AATTCTTCTCTTTCGTTGAAAAACAGGCCATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GAAGATTTCAAATCACCGGCGCAACTCGAACA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGATCGCGCTGGCGGTCGCATCCGTTGCCGT
GTGTTCCCCGCGCCAGCGGGGATAGCCGT

>NZ_CP019185|2|1|920042-920253|CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AATTCTTCTCTTTCGTTGAAAAACAGGCCATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GAAGATTTCAAATCACCGGCGCAACTCGAACA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGATCGCGCTGGCGGTCGCATCCGTTGCCGT
GTGTTCCCCGCGCCAGCGGGGATAGCCGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019185.1\|WP_000666425.1\|934076_934802_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187776
NZ_CP019185.1\|WP_000842512.1\|913695_914283_-\|fimbrial-protein	unknown	unknown	gnl\|CDD\|185169
NZ_CP019185.1\|WP_001670238.1\|933008_934067_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|378153
NZ_CP019185.1\|WP_000210861.1\|915919_917557_+\|CTP-synthase-(glutamine-hydrolyzing)	unknown	unknown	gnl\|CDD\|235437
NZ_CP019185.1\|WP_000192065.1\|927774_930474_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|182031
NZ_CP019185.1\|WP_000036734.1\|917639_918938_+\|phosphopyruvate-hydratase	unknown	unknown	gnl\|CDD\|234617
NZ_CP019185.1\|WP_000935107.1\|932383_932986_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09670_cse2gr11_CAS-I-E	gnl\|CDD\|274193
NZ_CP019185.1\|WP_000080389.1\|925619_926354_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NZ_CP019185.1\|WP_000281412.1\|934801_935506_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|187795
NZ_CP019185.1\|WP_000832400.1\|909119_909590_-\|fimbrial-protein	unknown	unknown	gnl\|CDD\|185179
NZ_CP019185.1\|WP_000210904.1\|922032_923832_+\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	unknown	unknown	gnl\|CDD\|182862
NZ_CP019185.1\|WP_001290675.1\|923831_925544_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	unknown	unknown	gnl\|CDD\|237402
NZ_CP019185.1\|WP_001044464.1\|910130_910904_-\|fimbria/pilus-periplasmic-chaperone	unknown	unknown	gnl\|CDD\|185177
NZ_CP019185.1\|WP_000178263.1\|909604_910111_-\|fimbrial-protein	unknown	unknown	gnl\|CDD\|185178
NZ_CP019185.1\|WP_000108313.1\|921234_921597_-\|6-carboxytetrahydropterin-synthase-QueD	unknown	unknown	gnl\|CDD\|238264
NZ_CP019185.1\|WP_001079653.1\|908586_909123_-\|fimbrial-protein	unknown	unknown	gnl\|CDD\|185168
NZ_CP019185.1\|WP_077929519.1\|910916_913616_-\|fimbrial-biogenesis-outer-membrane-usher-protein	unknown	unknown	gnl\|CDD\|185176
NZ_CP019185.1\|WP_000210451.1\|914891_915692_+\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
NZ_CP019185.1\|WP_001199962.1\|919073_919745_+\|7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|275126
NZ_CP019185.1\|WP_001145531.1\|926441_927395_-\|SPI-1-type-III-secretion-system-effector-SopD	unknown	unknown	gnl\|CDD\|185277

Protein	Function_ID	Function_description	E-value
NZ_CP019185.1\|WP_000666425.1\|934076_934802_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	3.27863e-48
NZ_CP019185.1\|WP_000842512.1\|913695_914283_-\|fimbrial-protein	gnl\|CDD\|185169	PRK15261, PRK15261, fimbrial protein SteA; Provisional.	5.36845e-100
NZ_CP019185.1\|WP_001670238.1\|933008_934067_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|378153	pfam09344, Cas_CT1975, CT1975-like protein. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum.	3.88788e-121
NZ_CP019185.1\|WP_000210861.1\|915919_917557_+\|CTP-synthase-(glutamine-hydrolyzing)	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
NZ_CP019185.1\|WP_000192065.1\|927774_930474_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|182031	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3.	3.70349e-143
NZ_CP019185.1\|WP_000036734.1\|917639_918938_+\|phosphopyruvate-hydratase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
NZ_CP019185.1\|WP_000935107.1\|932383_932986_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|274193	TIGR02548, CRISPR_system_Cascade_subunit_CasB, CRISPR type I-E/ECOLI-associated protein CasB/Cse2. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It was designated Cse2 originally, and renamed CasB based on its characterization in the CASCADE complex.	5.74874e-39
NZ_CP019185.1\|WP_000080389.1\|925619_926354_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	4.42567e-137
NZ_CP019185.1\|WP_000281412.1\|934801_935506_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|187795	cd09664, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas6e is an endoribonuclease that generates crRNA; This family is specific for CRISPR/Cas system I-E subtype; Homologous to Cas6 (RAMP superfamily protein); Possesses double RRM/ferredoxin fold; also known as Cse3 family.	4.22526e-90
NZ_CP019185.1\|WP_000832400.1\|909119_909590_-\|fimbrial-protein	gnl\|CDD\|185179	PRK15276, PRK15276, putative fimbrial subunit SteE; Provisional.	2.82246e-98
NZ_CP019185.1\|WP_000210904.1\|922032_923832_+\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	gnl\|CDD\|182862	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit.	0
NZ_CP019185.1\|WP_001290675.1\|923831_925544_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0
NZ_CP019185.1\|WP_001044464.1\|910130_910904_-\|fimbria/pilus-periplasmic-chaperone	gnl\|CDD\|185177	PRK15274, PRK15274, putative periplasmic fimbrial chaperone protein SteC; Provisional.	0
NZ_CP019185.1\|WP_000178263.1\|909604_910111_-\|fimbrial-protein	gnl\|CDD\|185178	PRK15275, PRK15275, putative fimbrial protein SteD; Provisional.	2.32072e-105
NZ_CP019185.1\|WP_000108313.1\|921234_921597_-\|6-carboxytetrahydropterin-synthase-QueD	gnl\|CDD\|238264	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS). Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids, as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after uptake by a carrier-mediated active transport system. Most microbes and plants lack this system and must synthesize folates de novo from guanosine triphosphate. One enzyme from this pathway is PTPS which catalyzes the conversion of dihydroneopterin triphosphate to 6-pyruvoyl tetrahydropterin. The functional enzyme is a hexamer of identical subunits.	2.78454e-58
NZ_CP019185.1\|WP_001079653.1\|908586_909123_-\|fimbrial-protein	gnl\|CDD\|185168	PRK15260, PRK15260, fimbrial protein SteF; Provisional.	1.32282e-120
NZ_CP019185.1\|WP_077929519.1\|910916_913616_-\|fimbrial-biogenesis-outer-membrane-usher-protein	gnl\|CDD\|185176	PRK15273, PRK15273, fimbrial biogenesis outer membrane usher protein.	0
NZ_CP019185.1\|WP_000210451.1\|914891_915692_+\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	3.42454e-158
NZ_CP019185.1\|WP_001199962.1\|919073_919745_+\|7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	4.95322e-154
NZ_CP019185.1\|WP_001145531.1\|926441_927395_-\|SPI-1-type-III-secretion-system-effector-SopD	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0

>NZ_CP019185.1|WP_001199962.1|919073_919745_+|7-carboxy-7-deazaguanine-synthase-QueE
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWDKLSDREVSLYSILAKIKESDKWGAASSEDLLAVINRQGYTARHVVITGGEPCIHDLMPLTDLLEKSGFSCQIETSGTHEVRCTPNTWVTVSPKVNMRGGYDVLSQALERANEIKHPVGRVRDIEALDELLATLSDDKPRVIALQPISQKEDATRLCIETCIARNWRLSMQTHKYLNIA
>NZ_CP019185.1|WP_000036734.1|917639_918938_+|phosphopyruvate-hydratase
MSKIVKVIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVGAVNGPIAQAILGKDAKDQAGIDKIMIDLDGTENKSNFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKGKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>NZ_CP019185.1|WP_000210861.1|915919_917557_+|CTP-synthase-(glutamine-hydrolyzing)
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQLAVDIGREHALFMHLTLVPYLAAAGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISMKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIYEEANPAGEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVTVNIKLIDSQDVETRGVEILKDLDAILIPGGFGYRGVEGKIATARYARENNIPYLGICLGMQVALIEFARNVAGMDNANSTEFVPDCKYPVVALITEWRDEDGNVEVRSEKSDLGGTMRLGAQQCQLSDDSLVRQLYGAPTIVERHRHRYEVNNMLLKQIEAAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAANEHQKRQAK
>NZ_CP019185.1|WP_000210451.1|914891_915692_+|nucleoside-triphosphate-pyrophosphohydrolase
MTTNHQIDRLLTLMQRLRDPENGCPWDKEQTFASIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFGELSADNSEEALVRWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCSNVGFDWTTLGPVVDKVYEEIDEVMFEARQAVVDQAKLEEEMGDLLFATVNMARHLGTKAELALQKANDKFERRFREVERIVAARGLEMTGVDLETMEEVWQEVKRQEIDL
>NZ_CP019185.1|WP_000842512.1|913695_914283_-|fimbrial-protein
MKSSHFCKLAVTASLVMGIVSGAQAAGSNTAKVTFLGNIVDSPCSVTLDTEDQTVNMGSSIGNGTLSNGKTTINNARTFHIDLEGCTWATEKNMNVVFTTGSGTTAATGATDNLALMKTDGTGAISNVSLAIGDAGKNNIKLGDTYTQAIADLDGDTILDEKQSLNFTAWLVGAATGTVGTGEFSSAANVTISYL
>NZ_CP019185.1|WP_077929519.1|910916_913616_-|fimbrial-biogenesis-outer-membrane-usher-protein
MMNNTWKSVLCPIACGVGMLLSASPYSASGKDIEFNTDFLDVKNRDNVNIAQFSRKGFILPGVYLLQIKINGQTLPQEFPVNWVIPEHDPQGSEVCAEPELVTQLGIKPELAEKLVWITHGERQCLAPDSLKGMDFQADLGHSTLLVNLPQAYMEYSDVDWDPPARWDNGIPGIILDYNINNQLRHDQESGSEEQSISGNGTLGANLGAWRLRADWQASYDHRDDDENTSTLHDQSWSRYYAYRALPTLGAKLTLGESYLQSDVFDSFNYIGASVVSDDQMLPPKLRGYAPEIVGIARSNAKVKVSWQGRVLYETQVPAGPFRIQDLNQSVSGTLHVTVEEQNGQTQEFDVNTASVPFLTRPGMVRYKMALGRPQDWDHHPITGTFASAEASWGVTNGWSLYGGAIGESNYQAVALGSGKDLGVVGAVAVDITHSIAHMPQDDGFDGETLQGNSYRISYSRDFDEIDSRLTFAGYRFSEKNFMSMSDYLDAKTYHHLNAGHEKERYTVTYNQNFREQGMSAYFSYSRSTFWDSPDQSNYNLSLSWYFDLGSIKNLSASLNGYRSEYNGDKDDGVYISLSVPWGNDSISYNGTFNGSQHRNQLGYSGHSQNGDNWQLHVGQDEQGAQADGYYSHQGALTDIDLSADYEEGSYRSLGMSLRGGMTLTTQGGALHRGSLAGSTRLLVDTDGIADVPVSGNGSPTSTNIFGKAVIADVGSYSRSLARIDLNKLPEKAEATKSVVQITLTEGAIGYRHFDVVSGEKMMAVFRLADGDFPPFGAEVKNERQQQLGLVADDGNAWLAGVKAGETLKVFWDGAAQCEASLPPTFTPELLANALLLPCKMLEGQPPTAPQKSSPLPAQPLIQEHTQTDGQPAAPVATTTQTPPIPLADNHAANRKDME
>NZ_CP019185.1|WP_001044464.1|910130_910904_-|fimbria/pilus-periplasmic-chaperone
MNKTNHFNRQALIATVLLAAPLVSHSAIVPDRTRVIFNGNENSITVTLKNGNATLPYLAQAWLEDDKFAKDTRYFTALPPLQRIEPKSDGQVKVQPLPAAAGLPQDRESLFYFNVREIPPKSDKPNTLQLALQTRIKFFYRPVAVARQVDKTHPWQTKLTLTYQGDGVIFDNPTPFYLVISNAGSKENETASGFKNLLIAPREKVTSPIKGASLGSSPVVGYVDDYGGHRLLVFTCSGNTCKVNEEKTRDAEKKANK
>NZ_CP019185.1|WP_000178263.1|909604_910111_-|fimbrial-protein
MTMLTRWKILVLLCGGFVTGTEAAGTKTVQLELHLVVTQPPPCTVGGASVEFGDVLTTKVGDVSQTKPVGYSLNCDGRASDYLKLQIQGTTTTISGEQVLQTSVQGLGIRIQQAGNKQLVPVGITDWLNFTLSGSNGPELEAVPVKEPTTQLAGGDFNASATLVVDYQ
>NZ_CP019185.1|WP_000832400.1|909119_909590_-|fimbrial-protein
MKRVLILTLLITRFACADNLTFHGKLINPPACTINNGETLEVSFGSVIIDNIDGVNYLTEIPWTLTCDSSFRDDALTFTLSYLGTATPYSAKALTTNVPGLGIELQQNGTVFPPGTSLTINESSLPTLKAVPVKQPGKEPAEGDFEAFATLQVDYQ
>NZ_CP019185.1|WP_001079653.1|908586_909123_-|fimbrial-protein
MNRIFQTTGHLIGGVMLWAVCNTLPAATPNVHYSGKLVAGACNLVVDNDTMATVDFHTIGSDNFDASGQTTPVPFTLSLQDCKTALANGVVVTFQGVEDSTLPGLLALESSSIANGFAIGIETADQHPLIINASQGTEFMLAEGNTIINLQAWLQKTSGENIMPREFNASAMVNFEYQ
>NZ_CP019185.1|WP_000108313.1|921234_921597_-|6-carboxytetrahydropterin-synthase-QueD
MSTTLYKDFTFEAAHRLPHVPEGHKCGRLHGHSFMVRLEITGEVDPHTGWIMDFADLKAAFKPTYDRLDHYYLNDIPGLSNPTSEVLAKWIWDQVKPVVPLLSAVMVKETCTAGCVYRGE
>NZ_CP019185.1|WP_000210904.1|922032_923832_+|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit
MTTPAPLTGLLPLNPEQLARLQAATTDLTPEQLAWVSGYFWGVLNPRSGAVAVTPAPEGKMPGVTLISASQTGNARRVAEALRDDLLAANLNVTLVNAGDYKFKQIASEKLLVIVTSTQGEGEPPEEAVALHKFLFSKKALKLENTAFAVFSLGDTSYEFFCQSGKDFDSKLAELGGERLLDRVDADVEYQAAASEWRARVVDVLKSRAPVAAPSQSVATGAVNDIHTSPYTKDAPLTATLSVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKELVELLWLKGDEPVTVDGKTLPLAEALEWHFELTVNTANIVENYATLTRSESLLPLVGDKAQLQHYAATTPIVDMVRFSPAQLDAQALIGLLRPLTPRLYSIASAQAEVESEVHITVGVVRYDIEGRARAGGASSFLAGRVEEEGEVRVFIEHNDNFRLPANPQTPVIMIGPGTGIAPFRAFMQQRAADGAEGKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLNRIDLAWSRDQKEKIYVQDKLREQGAELWRWINDGAHIYVCGDARCMAVDVEKALLEVIAEFGAMDIESADEYLSELRVERRYQRDVY
>NZ_CP019185.1|WP_001290675.1|923831_925544_+|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit
MSEKHPGPLVVEGKLSDAERMKRESNFLRGTIAEDLNDGLTGGFHGDNFLLIRFHGMYQQDDRDIRAERAAQKLEPRHAMLLRCRLPGGVITTTQWKAIDKFAADNTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNLVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGVDTFKEEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDNNWHLTLFIENGRILDYSGRPLKTGLLEIAKIHQGEFRITANQNLIIASVPESQKAKIETLARDHGLMNAVKPQRENSMACVSFPTCPLAMAEAERFLPSFTDKVEAILEKHGIPDEHIVMRVTGCPNGCGRAMLAEIGLVGKAPGRYNLHLGGNRIGTRIPRMYKENITEPDILASLGELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDFWE
>NZ_CP019185.1|WP_000080389.1|925619_926354_+|phosphoadenosine-phosphosulfate-reductase
MSQLDLNALNELPKVDRVLALAETNAQLETLTAEERVAWALENLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPEAYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNEINKVEPMNRALKELNAQTWFAGLRREQSGSRAHLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>NZ_CP019185.1|WP_001145531.1|926441_927395_-|SPI-1-type-III-secretion-system-effector-SopD
MPVTLSFGNHQNYTLNESRIAHLLSADKEKAIHMGGWDKVQDHFRAEKKDHALEVLHSIIHGQGRGEPGEMEVNVEDINKIYAFKRLQHLACPAHQDLFTIKMDASQTQFLLMVGDTVISQSNIKDILNISDDAVIESMSREERQLFLQICEVIGAKMTWHPELLQESISTLRKEVTGNAQIKAAVYEMMRPAEAPDHPLVEWQDSLTEDEKSMLTCINAGNFEPTTQFCKIGYQEVQGEVAFSMMHPCISYLLHTYSPFAEFKPTNSGFLKKLNQDYNDYHAKKMFIDVILEKLYLTHERSLHIGKDGCSRNILLT
>NZ_CP019185.1|WP_000192065.1|927774_930474_-|CRISPR-associated-helicase/endonuclease-Cas3
MTQIEYLDYLCYWGKTDKSTENITCNYHLLAYHCLDVAACGEYIIKNNTFNSCNILKECNISGTNAENWIIWFLASHDIGKFARGFQKYAEFPDSPLVSPISGVSAFERHDSLGFYLWGKLFEAWSSGSNEIIAGIEPENRARFESALNSWMLISTGHHGIPPDTMKNRSSLAFTDEDIVAATHYLEALSELFPFTLPQEWKTKAGRKCLKQHSWFFAGLVTLADWMGSDESQFPLLSSAMPLKDYWPLACEKAQQAILRMPPLSQHSHYQDHRALFPFIQTLTPLQQRASELDISAPGAQLVVLEDVTGAGKTEAALILTHRLMSANKGHGLYVGLPTMATANAMYQRLASAYHALFTDESRPSLILAHGGREMSDSFRQSIWQPTENIAEDYARDDGNATTECHTWFADSRKKALLAEVGVGTLDQLLMAVMPFRHQSLRLLGMRDKILLLDEVHAYDGYMVKLLEGLLRFHAAQGGSAIILSATLPAALREKLLNAFSDGAEFMSAGGSDNAGYPWLSHLTSSGLLEQPLATRPEVQRTVAVNWIQQRQEALDIIYRVVATGQCICWIRNTVDDALDTYQQLLHEGIVPEQDLLLFHSRFAFIDRIAIENKTLNWFGNNAPVSERRGKVLIATQVVEQSLDLDFDWMITDLAPIDLLIQRAGRLQRHIRDAHGQRKSTLPDERQPPVLHILAPHWQEQAEEGWLGQELKGTGFVYTDHACLWRTQALLRQHGEIRMPDNARALVDGVYEQKIAAPAGLQTISDVAFGKVLSQRSVAAQNLLRYDLGYDREASDFLWDKDREFSTRLGEESVDVYLARKDIDGQLRPLVDEIDFCWEKSRLSVRKSWWQKNSGTFQCPDEETLACFRKRHHRPSGQIVLVSDTGEASYYSKRFGLVG
>NZ_CP019185.1|WP_000935107.1|932383_932986_+|type-I-E-CRISPR-associated-protein-Cse2/CasB
MLNSNTAVLCRILHPDAQKALLDWFATLSERYERKDGKRVNGRAWRAELKRMAPPYGVMICEGHDALRQALLKHMRLQPLDEMALALFVSVAVHIKSHKENISFAAQLGEKLKGSTSCVSGLRFERLQKASDPETFCQLLIQAVKIRGTEGVNVLSLADGIFLWMEEWQRRENHQPEFRNPFERSRIRWANEYLSTSRGK
>NZ_CP019185.1|WP_001670238.1|933008_934067_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTTFIQLHLLTAYAPANLNRDESGRPKTAFMGGVERLRVSSQSLKRAWRVSETFEAAMDGFMGKRTRRIGVDYVYRPMKDAGIEEKIAKSSSELIAKQFGKLKSDKDAKPEKNLEIEQIVHVSNHEISLIKQLVDTLIADKREPNDEEVKLLRKEQRSVDMALFGRMLASSPEFNVEAACQVSHALGVSAVTVESDFFTAVDDLNNKEEDAGSGHMGEQGFASALFYTYVCISRDLLVENLGGNEELAKRTIAALTETALTVSPTGKQNSFASRAYATYALAEVGQKQPRSLAAAFFQPVRDTDQIPAAITRLKQQRASFDSVYGNCADDYRELNVQEGTGSLAELLAFVSQ
>NZ_CP019185.1|WP_000666425.1|934076_934802_+|type-I-E-CRISPR-associated-protein-Cas5/CasD
MKEYLVFQLYAPLASWGEEASGEIRHSATVPTRSALLGLLAAALGIRRDEEARLNNFNRHYHLAVHALASQDRWLRDYHTVSAPRENKKYRYYTRRDELTLASDEVGTLISQREYRCDGYWHVAISATPDAPYSLSELREALLTPHFPLYLGRKSCPLALPLAARLMTGTLKEVFTHAVEEISAAELSGFTLREGICYWDDPDEESLVWQQKQHSNNQPVSRQRWQFGGYTRFNGPLQERT
>NZ_CP019185.1|WP_000281412.1|934801_935506_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSRIQLRFNNLRPEMLAKWNSARPYASHQWLWQLFPEQELRQFLFREEAHGGFFMLSAIPPLLQHSLFLIETKPFNPQLTNGLELDFQLRANPVITRNGKRSDVMMNAKHQAKANGVEKERWWELQQQAAQAWLEQQGQQHGFRLIAPEPDDFAMWAGDEYSELQAHCGCVQAYQQHRFVRKDQETPITFSSVDFSGALCITDAALFKQALFSGLGKSKALGCGMLMVKRKR

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Crispr_ID: NZ_CP019185_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019185_3

936804-937259

TypeI-E

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAACCG	PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRT

7 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas3

The CRISPR arrays of NZ_CP019185_3

>merge|NZ_CP019185|3|936804-937259|PILER-CR,CRISPRCasFinder,CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCGCACGTCTACTGCGTCAGTTGTACCGGCTACGTGTGTTCCCCGCGCCAGCGGGGATAAACCGTACACCAAATGGGGGCCAGCAAAGAAAATGCTGTGTTCCCCGCGCCAGCGGGGATAAACCGGACAGCACGGTATTGCGTCACATCGTAATGAGGTGTTCCCCGCGCCAGCGGGGATAAACCGCACACGAACACTTTCTACGCGAGGGCGGCGCTGTGTTCCCCGCGCCAGCGGGGATAAACCGCTGTTTAGTTAAATCGTCGGCAAACGTAAACGGTGTTCCCCGCGCCAGCGGGGATAAACCGCGATTGCATCATCGCGCATAGTGTCAAATGTCGTGTTCCCCGCGCCAGCGGGGATAAACCGAGAAAATATAATTGTTCGTGACAGAATGATTCGTGTTCCCCGCGCCAGCGGGGATAAACAC

>NZ_CP019185|3|2|936804-937259|PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CACGTCTACTGCGTCAGTTGTACCGGCTACGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TACACCAAATGGGGGCCAGCAAAGAAAATGCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GACAGCACGGTATTGCGTCACATCGTAATGAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CACACGAACACTTTCTACGCGAGGGCGGCGCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTGTTTAGTTAAATCGTCGGCAAACGTAAACG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGATTGCATCATCGCGCATAGTGTCAAATGTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGAAAATATAATTGTTCGTGACAGAATGATTC
GTGTTCCCCGCGCCAGCGGGGATAAACAC

>NZ_CP019185|3|3|936804-937259|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CACGTCTACTGCGTCAGTTGTACCGGCTACGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TACACCAAATGGGGGCCAGCAAAGAAAATGCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GACAGCACGGTATTGCGTCACATCGTAATGAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CACACGAACACTTTCTACGCGAGGGCGGCGCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTGTTTAGTTAAATCGTCGGCAAACGTAAACG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGATTGCATCATCGCGCATAGTGTCAAATGTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGAAAATATAATTGTTCGTGACAGAATGATTC
GTGTTCCCCGCGCCAGCGGGGATAAACAC

>NZ_CP019185|3|2|936804-937259|CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CACGTCTACTGCGTCAGTTGTACCGGCTACGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TACACCAAATGGGGGCCAGCAAAGAAAATGCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GACAGCACGGTATTGCGTCACATCGTAATGAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CACACGAACACTTTCTACGCGAGGGCGGCGCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTGTTTAGTTAAATCGTCGGCAAACGTAAACG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGATTGCATCATCGCGCATAGTGTCAAATGTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGAAAATATAATTGTTCGTGACAGAATGATTC
GTGTTCCCCGCGCCAGCGGGGATAAACAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019185.1\|WP_000118672.1\|935505_936396_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NZ_CP019185.1\|WP_001670238.1\|933008_934067_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|378153
NZ_CP019185.1\|WP_000281412.1\|934801_935506_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|187795
NZ_CP019185.1\|WP_000741651.1\|942414_943125_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
NZ_CP019185.1\|WP_000935107.1\|932383_932986_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09670_cse2gr11_CAS-I-E	gnl\|CDD\|274193
NZ_CP019185.1\|WP_000666425.1\|934076_934802_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187776
NZ_CP019185.1\|WP_001118111.1\|941537_941894_+\|DUF3561-family-protein	unknown	unknown	gnl\|CDD\|371891
NZ_CP019185.1\|WP_001092272.1\|939488_940928_+\|sulfate-adenylyltransferase-subunit-CysN	unknown	unknown	gnl\|CDD\|235349
NZ_CP019185.1\|WP_000372402.1\|938570_939479_+\|sulfate-adenylyltransferase-subunit-CysD	unknown	unknown	gnl\|CDD\|235375
NZ_CP019185.1\|WP_000517480.1\|942084_942396_+\|cell-division-protein-FtsB	unknown	unknown	gnl\|CDD\|179156
NZ_CP019185.1\|WP_000253542.1\|945385_946012_+\|protein-L-isoaspartate(D-aspartate)-O-methyltransferase	unknown	unknown	gnl\|CDD\|178974
NZ_CP019185.1\|WP_001219244.1\|943124_943604_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851
NZ_CP019185.1\|WP_001145531.1\|926441_927395_-\|SPI-1-type-III-secretion-system-effector-SopD	unknown	unknown	gnl\|CDD\|185277
NZ_CP019185.1\|WP_000062282.1\|936425_936719_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	cd09648_cas2_CAS-I-E	gnl\|CDD\|236930
NZ_CP019185.1\|WP_001290675.1\|923831_925544_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	unknown	unknown	gnl\|CDD\|237402
NZ_CP019185.1\|WP_000134246.1\|943600_944650_+\|tRNA-pseudouridine(13)-synthase-TruD	unknown	unknown	gnl\|CDD\|234884
NZ_CP019185.1\|WP_000192065.1\|927774_930474_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|182031
NZ_CP019185.1\|WP_000080389.1\|925619_926354_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NZ_CP019185.1\|WP_001221546.1\|944630_945392_+\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732
NZ_CP019185.1\|WP_001173658.1\|940914_941520_+\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|179661

Protein	Function_ID	Function_description	E-value
NZ_CP019185.1\|WP_000118672.1\|935505_936396_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	2.51774e-156
NZ_CP019185.1\|WP_001670238.1\|933008_934067_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|378153	pfam09344, Cas_CT1975, CT1975-like protein. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum.	3.88788e-121
NZ_CP019185.1\|WP_000281412.1\|934801_935506_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|187795	cd09664, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas6e is an endoribonuclease that generates crRNA; This family is specific for CRISPR/Cas system I-E subtype; Homologous to Cas6 (RAMP superfamily protein); Possesses double RRM/ferredoxin fold; also known as Cse3 family.	4.22526e-90
NZ_CP019185.1\|WP_000741651.1\|942414_943125_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	2.14969e-118
NZ_CP019185.1\|WP_000935107.1\|932383_932986_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|274193	TIGR02548, CRISPR_system_Cascade_subunit_CasB, CRISPR type I-E/ECOLI-associated protein CasB/Cse2. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It was designated Cse2 originally, and renamed CasB based on its characterization in the CASCADE complex.	5.74874e-39
NZ_CP019185.1\|WP_000666425.1\|934076_934802_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	3.27863e-48
NZ_CP019185.1\|WP_001118111.1\|941537_941894_+\|DUF3561-family-protein	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	3.10351e-48
NZ_CP019185.1\|WP_001092272.1\|939488_940928_+\|sulfate-adenylyltransferase-subunit-CysN	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
NZ_CP019185.1\|WP_000372402.1\|938570_939479_+\|sulfate-adenylyltransferase-subunit-CysD	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
NZ_CP019185.1\|WP_000517480.1\|942084_942396_+\|cell-division-protein-FtsB	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	1.08865e-64
NZ_CP019185.1\|WP_000253542.1\|945385_946012_+\|protein-L-isoaspartate(D-aspartate)-O-methyltransferase	gnl\|CDD\|178974	PRK00312, pcm, protein-L-isoaspartate(D-aspartate) O-methyltransferase.	4.34083e-128
NZ_CP019185.1\|WP_001219244.1\|943124_943604_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	1.27909e-104
NZ_CP019185.1\|WP_001145531.1\|926441_927395_-\|SPI-1-type-III-secretion-system-effector-SopD	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0
NZ_CP019185.1\|WP_000062282.1\|936425_936719_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	5.81067e-65
NZ_CP019185.1\|WP_001290675.1\|923831_925544_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0
NZ_CP019185.1\|WP_000134246.1\|943600_944650_+\|tRNA-pseudouridine(13)-synthase-TruD	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
NZ_CP019185.1\|WP_000192065.1\|927774_930474_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|182031	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3.	3.70349e-143
NZ_CP019185.1\|WP_000080389.1\|925619_926354_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	4.42567e-137
NZ_CP019185.1\|WP_001221546.1\|944630_945392_+\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	2.28081e-145
NZ_CP019185.1\|WP_001173658.1\|940914_941520_+\|adenylyl-sulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	1.83357e-145

>NZ_CP019185.1|WP_000062282.1|936425_936719_+|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MSMLVVVTENVPPRLRGRLAVWLLEIRAGVYVGDVSAKIREMIWQQVSVLADEGNVVMAWATNTESGFEFQTFGVNRRIPVDLDGLRLVSFLPVENQ
>NZ_CP019185.1|WP_000118672.1|935505_936396_+|type-I-E-CRISPR-associated-endonuclease-Cas1
MSWLPLNPIPLKDRVSMIFLQYGQIDVIDGAFVLIDKTGVRTHIPVGSVACIMLEPGTRVSHAAVRLAATVGTLLVWVGEAGVRVYASGQPGGARSDKLLYQAKLALDEDLRLKVVRKMFELRFGEPAPSRRSVDQLRGIEGSRVRATYALLAKQYGVKWQGRRYDPKDWEKGDVINQCISSATSCLYGVTEAAILAAGYAPAIGFVHTGKLLSFVYDIADIIKFETVVPKAFEIARRNPAEPDRDVRIACRDIFRSGKTLAKLIPLIEDVLAAGEIQPPLPPEDSQPIAIPLPVA
>NZ_CP019185.1|WP_000281412.1|934801_935506_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSRIQLRFNNLRPEMLAKWNSARPYASHQWLWQLFPEQELRQFLFREEAHGGFFMLSAIPPLLQHSLFLIETKPFNPQLTNGLELDFQLRANPVITRNGKRSDVMMNAKHQAKANGVEKERWWELQQQAAQAWLEQQGQQHGFRLIAPEPDDFAMWAGDEYSELQAHCGCVQAYQQHRFVRKDQETPITFSSVDFSGALCITDAALFKQALFSGLGKSKALGCGMLMVKRKR
>NZ_CP019185.1|WP_000666425.1|934076_934802_+|type-I-E-CRISPR-associated-protein-Cas5/CasD
MKEYLVFQLYAPLASWGEEASGEIRHSATVPTRSALLGLLAAALGIRRDEEARLNNFNRHYHLAVHALASQDRWLRDYHTVSAPRENKKYRYYTRRDELTLASDEVGTLISQREYRCDGYWHVAISATPDAPYSLSELREALLTPHFPLYLGRKSCPLALPLAARLMTGTLKEVFTHAVEEISAAELSGFTLREGICYWDDPDEESLVWQQKQHSNNQPVSRQRWQFGGYTRFNGPLQERT
>NZ_CP019185.1|WP_001670238.1|933008_934067_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTTFIQLHLLTAYAPANLNRDESGRPKTAFMGGVERLRVSSQSLKRAWRVSETFEAAMDGFMGKRTRRIGVDYVYRPMKDAGIEEKIAKSSSELIAKQFGKLKSDKDAKPEKNLEIEQIVHVSNHEISLIKQLVDTLIADKREPNDEEVKLLRKEQRSVDMALFGRMLASSPEFNVEAACQVSHALGVSAVTVESDFFTAVDDLNNKEEDAGSGHMGEQGFASALFYTYVCISRDLLVENLGGNEELAKRTIAALTETALTVSPTGKQNSFASRAYATYALAEVGQKQPRSLAAAFFQPVRDTDQIPAAITRLKQQRASFDSVYGNCADDYRELNVQEGTGSLAELLAFVSQ
>NZ_CP019185.1|WP_000935107.1|932383_932986_+|type-I-E-CRISPR-associated-protein-Cse2/CasB
MLNSNTAVLCRILHPDAQKALLDWFATLSERYERKDGKRVNGRAWRAELKRMAPPYGVMICEGHDALRQALLKHMRLQPLDEMALALFVSVAVHIKSHKENISFAAQLGEKLKGSTSCVSGLRFERLQKASDPETFCQLLIQAVKIRGTEGVNVLSLADGIFLWMEEWQRRENHQPEFRNPFERSRIRWANEYLSTSRGK
>NZ_CP019185.1|WP_000192065.1|927774_930474_-|CRISPR-associated-helicase/endonuclease-Cas3
MTQIEYLDYLCYWGKTDKSTENITCNYHLLAYHCLDVAACGEYIIKNNTFNSCNILKECNISGTNAENWIIWFLASHDIGKFARGFQKYAEFPDSPLVSPISGVSAFERHDSLGFYLWGKLFEAWSSGSNEIIAGIEPENRARFESALNSWMLISTGHHGIPPDTMKNRSSLAFTDEDIVAATHYLEALSELFPFTLPQEWKTKAGRKCLKQHSWFFAGLVTLADWMGSDESQFPLLSSAMPLKDYWPLACEKAQQAILRMPPLSQHSHYQDHRALFPFIQTLTPLQQRASELDISAPGAQLVVLEDVTGAGKTEAALILTHRLMSANKGHGLYVGLPTMATANAMYQRLASAYHALFTDESRPSLILAHGGREMSDSFRQSIWQPTENIAEDYARDDGNATTECHTWFADSRKKALLAEVGVGTLDQLLMAVMPFRHQSLRLLGMRDKILLLDEVHAYDGYMVKLLEGLLRFHAAQGGSAIILSATLPAALREKLLNAFSDGAEFMSAGGSDNAGYPWLSHLTSSGLLEQPLATRPEVQRTVAVNWIQQRQEALDIIYRVVATGQCICWIRNTVDDALDTYQQLLHEGIVPEQDLLLFHSRFAFIDRIAIENKTLNWFGNNAPVSERRGKVLIATQVVEQSLDLDFDWMITDLAPIDLLIQRAGRLQRHIRDAHGQRKSTLPDERQPPVLHILAPHWQEQAEEGWLGQELKGTGFVYTDHACLWRTQALLRQHGEIRMPDNARALVDGVYEQKIAAPAGLQTISDVAFGKVLSQRSVAAQNLLRYDLGYDREASDFLWDKDREFSTRLGEESVDVYLARKDIDGQLRPLVDEIDFCWEKSRLSVRKSWWQKNSGTFQCPDEETLACFRKRHHRPSGQIVLVSDTGEASYYSKRFGLVG
>NZ_CP019185.1|WP_001145531.1|926441_927395_-|SPI-1-type-III-secretion-system-effector-SopD
MPVTLSFGNHQNYTLNESRIAHLLSADKEKAIHMGGWDKVQDHFRAEKKDHALEVLHSIIHGQGRGEPGEMEVNVEDINKIYAFKRLQHLACPAHQDLFTIKMDASQTQFLLMVGDTVISQSNIKDILNISDDAVIESMSREERQLFLQICEVIGAKMTWHPELLQESISTLRKEVTGNAQIKAAVYEMMRPAEAPDHPLVEWQDSLTEDEKSMLTCINAGNFEPTTQFCKIGYQEVQGEVAFSMMHPCISYLLHTYSPFAEFKPTNSGFLKKLNQDYNDYHAKKMFIDVILEKLYLTHERSLHIGKDGCSRNILLT
>NZ_CP019185.1|WP_000080389.1|925619_926354_+|phosphoadenosine-phosphosulfate-reductase
MSQLDLNALNELPKVDRVLALAETNAQLETLTAEERVAWALENLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPEAYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNEINKVEPMNRALKELNAQTWFAGLRREQSGSRAHLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>NZ_CP019185.1|WP_001290675.1|923831_925544_+|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit
MSEKHPGPLVVEGKLSDAERMKRESNFLRGTIAEDLNDGLTGGFHGDNFLLIRFHGMYQQDDRDIRAERAAQKLEPRHAMLLRCRLPGGVITTTQWKAIDKFAADNTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNLVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGVDTFKEEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDNNWHLTLFIENGRILDYSGRPLKTGLLEIAKIHQGEFRITANQNLIIASVPESQKAKIETLARDHGLMNAVKPQRENSMACVSFPTCPLAMAEAERFLPSFTDKVEAILEKHGIPDEHIVMRVTGCPNGCGRAMLAEIGLVGKAPGRYNLHLGGNRIGTRIPRMYKENITEPDILASLGELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDFWE
>NZ_CP019185.1|WP_000372402.1|938570_939479_+|sulfate-adenylyltransferase-subunit-CysD
MDQKRLTHLRQLETESIHIIREVAAEFANPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYAFRDRTANAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWRNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMVDDDRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESHAQTLPEIIEEMLVSTTSERQGRMIDRDQAGSMELKKRQGYF
>NZ_CP019185.1|WP_001092272.1|939488_940928_+|sulfate-adenylyltransferase-subunit-CysN
MNTILAQQIASEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTLQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYREETFARIREDYLTFAEQLPGDLDIRFVPLSALEGDNVAAQSANMRWYSGPTLLEVLETVDIQRAVDRQPMRFPVQYVNRPNLDFRGYAGTLASGSVKVGERIKMLPSGVESSVARIVTFDGDKEEACAGEAITLVLNDDIDISRGDLLLAANETLAPARHAAIDVVWMAEQPLAPGQSYDVKLAGKKTRARIEAICYQIDINNLTQRDVESLPLNGIGLVEMTFDEPLALDIYQQNPVTGGLIFIDRLSNVTVGAGMVRELDERGATPPVEYSAFELELNALVRRHFPHWDARDLLGDKHGAA
>NZ_CP019185.1|WP_001173658.1|940914_941520_+|adenylyl-sulfate-kinase
MALHDENVVWHSHPVTVAAREQLHGHRGVMLWFTGLSGSGKSTVAGALEEALHQRGVSTYLLDGDNVRHGLCRDLGFSDADRQENIRRVGEVASLMADAGLIVLTAFISPHRAERQLVKERVGHDRFIEIYVNTPLAICEQRDPKGLYKKARAGELRNFTGIDAIYEAPDSPQVHLNGEQLVTNLVSQLLDLLRRRDIIRS
>NZ_CP019185.1|WP_001118111.1|941537_941894_+|DUF3561-family-protein
MPGMVKVTGFNMRNSHNITFTRSDAFMVDDDATSAFPGAVVGFVSWLLALGIPFLLYGPNTLFFFLYTWPFFLTLMPVSVIIGIALHLLVKGKILFSIMFTLLAVGALFGALFIWLLG
>NZ_CP019185.1|WP_000517480.1|942084_942396_+|cell-division-protein-FtsB
MGKLTLLLLALLVWLQYSLWFGKNGIHDYSRVNDDVVAQQATNAKLKARNDQLFAEIDDLNGGQEAIEERARNELSMTKPGETFYRLVPDASKRAATAGQTHR
>NZ_CP019185.1|WP_000741651.1|942414_943125_+|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MAATLLDVCAVVPAAGFGRRMQTECPKQYLSIGNKTILEHSVHALLAHPRVTRVVIAISPGDHRFAQLPLANHPQITVVDGGNERADSVLAGLQAVAKAQWVLVHDAARPCLHQDDLARLLAISENSRVGGILASPVRDTMKRGEPGKTAIAHTVERADLWHALTPQFFPRELLHDCLTRALNEGAIITDEASALEYCGFHPALVEGRADNIKVTRPEDLALAEFYLTRTIHQEKA
>NZ_CP019185.1|WP_001219244.1|943124_943604_+|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLMKAAK
>NZ_CP019185.1|WP_000134246.1|943600_944650_+|tRNA-pseudouridine(13)-synthase-TruD
MTEFDNLTWLHGKPQGSGLLKANPEDFVVVEDLGFTPDGEGEHILLRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDFSAFQLEGCKVLEYARHKRKLRLGALKGNAFTLVLREISDRRDVETRLQAIRDGGVPNYFGAQRFGIGGSNLQGALRWAQSNAPVRDRNKRSFWLSAARSALFNQIVHQRLKKPDFNQVVDGDALQLAGRGSWFVATSEELPELQRRVDEKELMITASLPGSGEWGTQRAALAFEQDAIAQETVLQSLLLREKVEASRRAMLLYPQQLSWNWWDDVTVELRFWLPAGSFATSVVRELINTMGDYAHIAE
>NZ_CP019185.1|WP_001221546.1|944630_945392_+|5'/3'-nucleotidase-SurE
MRILLSNDDGVHAPGIQTLAKALRKFADVQVVAPDRNRSGASNSLTLESSLRTFTFDNGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLNGYQHYDTAAAVTCALLRGLSREPLRTGRILNVNVPDLPLAQIKGIRVTRCGSRHPADKVIPQEDPRGNTLYWIGPPGDKYDAGLDTDFAAVDEGYVSVTPLHVDLTAHSAHDVVSDWLDSVGVGTQW
>NZ_CP019185.1|WP_000253542.1|945385_946012_+|protein-L-isoaspartate(D-aspartate)-O-methyltransferase
MVSGRVQALLEQLRAQGIRDELVLNALAAVPREKFIDEAFEHKAWENIALPIGQGQTISQPYMVARMTELLELTPQSRVLEIGTGSGYQTAILAHLVHHVCSVERIKGLQWQARRRLKQLDLHNVSTRHGDGWQGWQARAPFDAIIVTAAPPEIPTALMAQLDEGGILVLPVGDEQQFLKRVRRRGGEFIIDTVEAVRFVPLVKGELA

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Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP019185_2	2.5\|920193\|32\|NZ_CP019185\|CRISPRCasFinder,CRT	920193-920224	32	NZ_CP024424	Paracoccus yeei strain TT13 plasmid pTT13-2, complete sequence	112052-112083	5	0.844
NZ_CP019185_2	2.5\|920193\|32\|NZ_CP019185\|CRISPRCasFinder,CRT	920193-920224	32	NZ_CP020440	Paracoccus yeei strain FDAARGOS_252 plasmid unnamed2, complete sequence	224971-225002	5	0.844
NZ_CP019185_2	2.5\|920193\|32\|NZ_CP019185\|CRISPRCasFinder,CRT	920193-920224	32	NZ_CP044082	Paracoccus yeei strain FDAARGOS_643 plasmid unnamed4, complete sequence	90792-90823	5	0.844
NZ_CP019185_2	2.5\|920193\|32\|NZ_CP019185\|CRISPRCasFinder,CRT	920193-920224	32	NZ_CP031080	Paracoccus yeei strain CCUG 32053 plasmid pYEE2, complete sequence	271400-271431	6	0.812
NZ_CP019185_2	2.1\|920072\|31\|NZ_CP019185\|PILER-CR	920072-920102	31	NZ_CP014208	Pantoea ananatis strain R100 plasmid, complete sequence	64395-64425	7	0.774
NZ_CP019185_2	2.3\|920071\|32\|NZ_CP019185\|CRISPRCasFinder,CRT	920071-920102	32	NZ_CP014208	Pantoea ananatis strain R100 plasmid, complete sequence	64395-64426	7	0.781
NZ_CP019185_2	2.5\|920193\|32\|NZ_CP019185\|CRISPRCasFinder,CRT	920193-920224	32	NC_008826	Methylibium petroleiphilum PM1 plasmid RPME01, complete sequence	343727-343758	7	0.781
NZ_CP019185_2	2.5\|920193\|32\|NZ_CP019185\|CRISPRCasFinder,CRT	920193-920224	32	NC_009621	Sinorhizobium medicae WSM419 plasmid pSMED02, complete sequence	654402-654433	7	0.781
NZ_CP019185_2	2.1\|920072\|31\|NZ_CP019185\|PILER-CR	920072-920102	31	NC_016817	Pantoea ananatis LMG 5342 plasmid pPANA10, complete sequence	2105-2135	8	0.742
NZ_CP019185_2	2.1\|920072\|31\|NZ_CP019185\|PILER-CR	920072-920102	31	NZ_CP020944	Pantoea ananatis strain PNA 97-1R plasmid unamed1, complete sequence	2105-2135	8	0.742
NZ_CP019185_2	2.1\|920072\|31\|NZ_CP019185\|PILER-CR	920072-920102	31	NC_017553	Pantoea ananatis PA13 plasmid PAGR_p, complete sequence	2205-2235	8	0.742
NZ_CP019185_2	2.1\|920072\|31\|NZ_CP019185\|PILER-CR	920072-920102	31	NC_017533	Pantoea ananatis AJ13355 plasmid pEA320, complete sequence	108523-108553	8	0.742
NZ_CP019185_2	2.1\|920072\|31\|NZ_CP019185\|PILER-CR	920072-920102	31	NZ_CP035036	Pantoea ananatis strain NN08200 plasmid unnamed2, complete sequence	264500-264530	8	0.742
NZ_CP019185_2	2.5\|920193\|32\|NZ_CP019185\|CRISPRCasFinder,CRT	920193-920224	32	NZ_CP029452	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence	2052295-2052326	8	0.75
NZ_CP019185_2	2.3\|920071\|32\|NZ_CP019185\|CRISPRCasFinder,CRT	920071-920102	32	NC_017533	Pantoea ananatis AJ13355 plasmid pEA320, complete sequence	108523-108554	9	0.719
NZ_CP019185_2	2.3\|920071\|32\|NZ_CP019185\|CRISPRCasFinder,CRT	920071-920102	32	NC_016817	Pantoea ananatis LMG 5342 plasmid pPANA10, complete sequence	2104-2135	9	0.719
NZ_CP019185_2	2.3\|920071\|32\|NZ_CP019185\|CRISPRCasFinder,CRT	920071-920102	32	NZ_CP020944	Pantoea ananatis strain PNA 97-1R plasmid unamed1, complete sequence	2104-2135	9	0.719
NZ_CP019185_2	2.3\|920071\|32\|NZ_CP019185\|CRISPRCasFinder,CRT	920071-920102	32	NC_017553	Pantoea ananatis PA13 plasmid PAGR_p, complete sequence	2204-2235	9	0.719
NZ_CP019185_2	2.3\|920071\|32\|NZ_CP019185\|CRISPRCasFinder,CRT	920071-920102	32	NZ_CP035036	Pantoea ananatis strain NN08200 plasmid unnamed2, complete sequence	264500-264531	9	0.719
NZ_CP019185_2	2.3\|920071\|32\|NZ_CP019185\|CRISPRCasFinder,CRT	920071-920102	32	MH552514	Siphoviridae sp. isolate ctba45, complete genome	4692-4723	9	0.719
NZ_CP019185_3	3.6\|937138\|32\|NZ_CP019185\|PILER-CR,CRISPRCasFinder,CRT	937138-937169	32	NZ_CP048637	Rhizobium oryzihabitans strain M15 plasmid p5, complete sequence	43437-43468	9	0.719
NZ_CP019185_3	3.6\|937138\|32\|NZ_CP019185\|PILER-CR,CRISPRCasFinder,CRT	937138-937169	32	NZ_CP048639	Rhizobium oryzihabitans strain M15 plasmid p7, complete sequence	54880-54911	9	0.719
NZ_CP019185_3	3.5\|937077\|32\|NZ_CP019185\|PILER-CR,CRISPRCasFinder,CRT	937077-937108	32	NZ_CP019739	Lactobacillus brevis strain TMW 1.2108 plasmid pl12108-5, complete sequence	3689-3720	10	0.688
NZ_CP019185_3	3.5\|937077\|32\|NZ_CP019185\|PILER-CR,CRISPRCasFinder,CRT	937077-937108	32	NZ_CP030354	Novosphingobium sp. P6W plasmid pP6W1, complete sequence	379454-379485	10	0.688

1. spacer 2.5|920193|32|NZ_CP019185|CRISPRCasFinder,CRT matches to NZ_CP024424 (Paracoccus yeei strain TT13 plasmid pTT13-2, complete sequence) position: , mismatch: 5, identity: 0.844

gggatcgcgctggcggtcgcatccgttgccgt-	CRISPR spacer
gagatcgcgctggcggcctcatccg-tgccgca	Protospacer
*.**************.* ****** *****.

2. spacer 2.5|920193|32|NZ_CP019185|CRISPRCasFinder,CRT matches to NZ_CP020440 (Paracoccus yeei strain FDAARGOS_252 plasmid unnamed2, complete sequence) position: , mismatch: 5, identity: 0.844

gggatcgcgctggcggtcgcatccgttgccgt-	CRISPR spacer
gagatcgcgctggcggcctcatccg-tgccgca	Protospacer
*.**************.* ****** *****.

3. spacer 2.5|920193|32|NZ_CP019185|CRISPRCasFinder,CRT matches to NZ_CP044082 (Paracoccus yeei strain FDAARGOS_643 plasmid unnamed4, complete sequence) position: , mismatch: 5, identity: 0.844

gggatcgcgctggcggtcgcatccgttgccgt-	CRISPR spacer
gagatcgcgctggcggcctcatccg-tgccgca	Protospacer
*.**************.* ****** *****.

4. spacer 2.5|920193|32|NZ_CP019185|CRISPRCasFinder,CRT matches to NZ_CP031080 (Paracoccus yeei strain CCUG 32053 plasmid pYEE2, complete sequence) position: , mismatch: 6, identity: 0.812

gggatcgcgctggcggtcgcatccgttgccgt-	CRISPR spacer
cagatcgcgctggcggcctcatccg-tgccgca	Protospacer
 .**************.* ****** *****.

5. spacer 2.1|920072|31|NZ_CP019185|PILER-CR matches to NZ_CP014208 (Pantoea ananatis strain R100 plasmid, complete sequence) position: , mismatch: 7, identity: 0.774

attcttctctttcgttgaaaaacaggccatc	CRISPR spacer
acccttttctttcgttgaaaaacgggatatg	Protospacer
*..***.****************.** .**

6. spacer 2.3|920071|32|NZ_CP019185|CRISPRCasFinder,CRT matches to NZ_CP014208 (Pantoea ananatis strain R100 plasmid, complete sequence) position: , mismatch: 7, identity: 0.781

aattcttctctttcgttgaaaaacaggccatc	CRISPR spacer
aacccttttctttcgttgaaaaacgggatatg	Protospacer
**..***.****************.** .**

7. spacer 2.5|920193|32|NZ_CP019185|CRISPRCasFinder,CRT matches to NC_008826 (Methylibium petroleiphilum PM1 plasmid RPME01, complete sequence) position: , mismatch: 7, identity: 0.781

gggatcgcgctggcggtcgcatccgttgccgt-	CRISPR spacer
gggatcgcggtggcggtcgc-ttcgaggaagtt	Protospacer
********* ********** *.**  *  **

8. spacer 2.5|920193|32|NZ_CP019185|CRISPRCasFinder,CRT matches to NC_009621 (Sinorhizobium medicae WSM419 plasmid pSMED02, complete sequence) position: , mismatch: 7, identity: 0.781

gggatcgcgctggcggtcgcatccgttgccgt-	CRISPR spacer
cggctcgcgctggcggtcgcttcc-tcggcgcg	Protospacer
 ** **************** *** *.* **.

9. spacer 2.1|920072|31|NZ_CP019185|PILER-CR matches to NC_016817 (Pantoea ananatis LMG 5342 plasmid pPANA10, complete sequence) position: , mismatch: 8, identity: 0.742

attcttctctttcgttgaaaaacaggccatc	CRISPR spacer
ccccttttctttcgttgaaaaacgggatatg	Protospacer
 ..***.****************.** .**

10. spacer 2.1|920072|31|NZ_CP019185|PILER-CR matches to NZ_CP020944 (Pantoea ananatis strain PNA 97-1R plasmid unamed1, complete sequence) position: , mismatch: 8, identity: 0.742

attcttctctttcgttgaaaaacaggccatc	CRISPR spacer
tcccttttctttcgttgaaaaacgggatatg	Protospacer
 ..***.****************.** .**

11. spacer 2.1|920072|31|NZ_CP019185|PILER-CR matches to NC_017553 (Pantoea ananatis PA13 plasmid PAGR_p, complete sequence) position: , mismatch: 8, identity: 0.742

attcttctctttcgttgaaaaacaggccatc	CRISPR spacer
ccccttttctttcgttgaaaaacgggatatg	Protospacer
 ..***.****************.** .**

12. spacer 2.1|920072|31|NZ_CP019185|PILER-CR matches to NC_017533 (Pantoea ananatis AJ13355 plasmid pEA320, complete sequence) position: , mismatch: 8, identity: 0.742

attcttctctttcgttgaaaaacaggccatc	CRISPR spacer
ccccttttctttcgttgaaaaacgggatatg	Protospacer
 ..***.****************.** .**

13. spacer 2.1|920072|31|NZ_CP019185|PILER-CR matches to NZ_CP035036 (Pantoea ananatis strain NN08200 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.742

attcttctctttcgttgaaaaacaggccatc	CRISPR spacer
ccccttttctttcgttgaaaaacgggatatg	Protospacer
 ..***.****************.** .**

14. spacer 2.5|920193|32|NZ_CP019185|CRISPRCasFinder,CRT matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 8, identity: 0.75

gggatcgcgctggcggtcgcatccgttgccgt	CRISPR spacer
cggctcgcgctcgcggtcgcatcctcggcccg	Protospacer
 ** ******* ************ . ***

15. spacer 2.3|920071|32|NZ_CP019185|CRISPRCasFinder,CRT matches to NC_017533 (Pantoea ananatis AJ13355 plasmid pEA320, complete sequence) position: , mismatch: 9, identity: 0.719

aattcttctctttcgttgaaaaacaggccatc	CRISPR spacer
tccccttttctttcgttgaaaaacgggatatg	Protospacer
  ..***.****************.** .**

16. spacer 2.3|920071|32|NZ_CP019185|CRISPRCasFinder,CRT matches to NC_016817 (Pantoea ananatis LMG 5342 plasmid pPANA10, complete sequence) position: , mismatch: 9, identity: 0.719

aattcttctctttcgttgaaaaacaggccatc	CRISPR spacer
tccccttttctttcgttgaaaaacgggatatg	Protospacer
  ..***.****************.** .**

17. spacer 2.3|920071|32|NZ_CP019185|CRISPRCasFinder,CRT matches to NZ_CP020944 (Pantoea ananatis strain PNA 97-1R plasmid unamed1, complete sequence) position: , mismatch: 9, identity: 0.719

aattcttctctttcgttgaaaaacaggccatc	CRISPR spacer
ttcccttttctttcgttgaaaaacgggatatg	Protospacer
  ..***.****************.** .**

18. spacer 2.3|920071|32|NZ_CP019185|CRISPRCasFinder,CRT matches to NC_017553 (Pantoea ananatis PA13 plasmid PAGR_p, complete sequence) position: , mismatch: 9, identity: 0.719

aattcttctctttcgttgaaaaacaggccatc	CRISPR spacer
tccccttttctttcgttgaaaaacgggatatg	Protospacer
  ..***.****************.** .**

19. spacer 2.3|920071|32|NZ_CP019185|CRISPRCasFinder,CRT matches to NZ_CP035036 (Pantoea ananatis strain NN08200 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

aattcttctctttcgttgaaaaacaggccatc	CRISPR spacer
tccccttttctttcgttgaaaaacgggatatg	Protospacer
  ..***.****************.** .**

20. spacer 2.3|920071|32|NZ_CP019185|CRISPRCasFinder,CRT matches to MH552514 (Siphoviridae sp. isolate ctba45, complete genome) position: , mismatch: 9, identity: 0.719

aattcttctctttcgttgaaaaacaggccatc	CRISPR spacer
aattcttctctttttttgaaaaagatattctg	Protospacer
*************. ******** * ... *

21. spacer 3.6|937138|32|NZ_CP019185|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP048637 (Rhizobium oryzihabitans strain M15 plasmid p5, complete sequence) position: , mismatch: 9, identity: 0.719

cgattgcatcatcgcgcatagtgtcaaatgtc	CRISPR spacer
cgattgcatcctcgcgcatcgtggatcagcgc	Protospacer
********** ******** ***    *   *

22. spacer 3.6|937138|32|NZ_CP019185|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP048639 (Rhizobium oryzihabitans strain M15 plasmid p7, complete sequence) position: , mismatch: 9, identity: 0.719

cgattgcatcatcgcgcatagtgtcaaatgtc	CRISPR spacer
cgattgcatcctcgcgcatcgtggatcagcgc	Protospacer
********** ******** ***    *   *

23. spacer 3.5|937077|32|NZ_CP019185|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019739 (Lactobacillus brevis strain TMW 1.2108 plasmid pl12108-5, complete sequence) position: , mismatch: 10, identity: 0.688

ctgtttagttaaatcgtcggcaaacgtaaacg	CRISPR spacer
tagtttagttagatagtcggcaaacaatccct	Protospacer
. *********.** **********.    *

24. spacer 3.5|937077|32|NZ_CP019185|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030354 (Novosphingobium sp. P6W plasmid pP6W1, complete sequence) position: , mismatch: 10, identity: 0.688

ctgtttagttaaatcgtcggcaaacgtaaacg	CRISPR spacer
gcaaatgcgtaaattatcggcaaacgtaaacg	Protospacer
 ..  *.  *****..****************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1100053 : 1192853

Cronobacter_phage(67.5%)

holin,tRNA,portal,tail,capsid,integrase,terminase,head,plate

attL 1098906:1098954|attR 1131174:1131222

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1098906:1098954	attL	NA	NA	NA	NA
WP_012532529.1\|1100053_1101067_-\|integrase	tyrosine-type recombinase/integrase	F1BUN9	Cronobacter_phage	2.5e-174	85.1
WP_000687097.1\|1101066_1101639_-	phage repressor protein CI	F1BUN8	Cronobacter_phage	1.7e-58	53.8
WP_023211710.1\|1102021_1102525_+	phage protein	F1BUN6	Cronobacter_phage	4.5e-60	72.5
WP_000643374.1\|1102534_1102762_+	DUF2724 domain-containing protein	NA	NA	NA	NA
WP_000022786.1\|1103176_1103578_+	hypothetical protein	F1BUN2	Cronobacter_phage	1.4e-48	66.9
WP_000057334.1\|1103645_1103876_+	DUF2732 family protein	NA	NA	NA	NA
WP_023211708.1\|1103866_1104679_+	Dam family site-specific DNA-(adenine-N6)-methyltransferase	F1BUN1	Cronobacter_phage	3.0e-122	84.6
WP_016504913.1\|1104719_1104863_+	hypothetical protein	NA	NA	NA	NA
WP_001137729.1\|1104989_1106741_+	replication endonuclease	F1BUM9	Cronobacter_phage	2.2e-255	75.0
WP_000960960.1\|1106853_1107072_+	hypothetical protein	E5G6M0	Salmonella_phage	2.8e-06	49.1
WP_001552031.1\|1107045_1107369_-	ogr/Delta-like zinc finger family protein	F1BUM8	Cronobacter_phage	8.0e-50	92.3
WP_046598166.1\|1107365_1108370_-\|portal	phage portal protein	F1BUM7	Cronobacter_phage	1.6e-160	79.3
WP_001151947.1\|1108424_1110200_-	hypothetical protein	F1BUM5	Cronobacter_phage	7.0e-289	82.6
WP_000018798.1\|1110360_1111161_+\|capsid	phage capsid scaffolding protein	F1BUM4	Cronobacter_phage	3.2e-76	54.8
WP_000550496.1\|1111222_1112245_+\|capsid	phage major capsid protein, P2 family	F1BUM2	Cronobacter_phage	1.1e-158	81.2
WP_001218536.1\|1112248_1112950_+\|terminase	terminase	F1BUM0	Cronobacter_phage	3.2e-88	67.2
WP_000447487.1\|1113010_1113499_+\|head	head completion/stabilization protein	F1BUL8	Cronobacter_phage	2.3e-64	82.7
WP_000084220.1\|1113495_1114002_+\|tail	phage tail protein	F1BUL7	Cronobacter_phage	5.2e-64	69.8
WP_000560074.1\|1113998_1114706_+	hypothetical protein	F1BUL6	Cronobacter_phage	6.3e-100	75.2
WP_000220202.1\|1114702_1115830_+	DUF2586 domain-containing protein	F1BUL5	Cronobacter_phage	5.6e-175	83.5
WP_000166742.1\|1115826_1116282_+	DUF2597 family protein	F1BUL4	Cronobacter_phage	2.1e-56	71.5
WP_001154425.1\|1116291_1116585_+\|holin	holin	C7BGD7	Burkholderia_phage	1.3e-14	46.2
WP_000175560.1\|1116581_1116923_+	M15 family metallopeptidase	F1BUL3	Cronobacter_phage	2.2e-50	91.1
WP_000376372.1\|1116922_1117255_+	hypothetical protein	F1BUL2	Cronobacter_phage	2.6e-35	70.0
WP_000411339.1\|1117401_1117659_+	hypothetical protein	A5X9I7	Aeromonas_virus	3.6e-21	63.4
WP_000811085.1\|1117846_1119817_+\|tail	phage tail tape measure protein	F1BUK9	Cronobacter_phage	5.6e-271	70.1
WP_001002797.1\|1119813_1120143_+	DUF2590 family protein	F1BUK8	Cronobacter_phage	3.8e-39	72.4
WP_000136924.1\|1120139_1121324_+	hypothetical protein	F1BUK6	Cronobacter_phage	2.8e-177	77.6
WP_001001826.1\|1121316_1121904_+	hypothetical protein	F1BUK5	Cronobacter_phage	2.4e-89	82.1
WP_000084304.1\|1121913_1123941_+\|tail	phage tail protein	F1BUK3	Cronobacter_phage	1.2e-154	47.9
WP_000421117.1\|1123958_1124486_+\|tail	tail fiber assembly protein	A0A0U2QV64	Escherichia_phage	3.1e-51	52.6
WP_000267952.1\|1124475_1125201_+	hypothetical protein	F1BUK1	Cronobacter_phage	2.3e-68	56.8
WP_000200793.1\|1125172_1125718_+	hypothetical protein	F1BUJ9	Cronobacter_phage	1.9e-59	72.5
WP_011233142.1\|1125720_1127421_+	hypothetical protein	F1BUJ7	Cronobacter_phage	9.2e-222	80.9
WP_000136561.1\|1128100_1129219_+	DUF4935 domain-containing protein	NA	NA	NA	NA
WP_001177838.1\|1130843_1131092_-	hypothetical protein	NA	NA	NA	NA
WP_000342601.1\|1131607_1132771_-	HlyD family type I secretion periplasmic adaptor subunit	NA	NA	NA	NA
1131174:1131222	attR	NA	NA	NA	NA
WP_000196157.1\|1132778_1134959_-	type I secretion system permease/ATPase	F2Y302	Organic_Lake_phycodnavirus	1.3e-18	34.0
WP_000533854.1\|1134955_1136365_-	TolC family outer membrane protein	NA	NA	NA	NA
WP_023211703.1\|1136429_1147904_-	biofilm-associated protein BapA	NA	NA	NA	NA
WP_001518569.1\|1148522_1149005_-	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	5.2e-29	47.4
WP_000242604.1\|1149153_1149630_+	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA
WP_001112990.1\|1149619_1149910_+	RnfH family protein	NA	NA	NA	NA
WP_001203445.1\|1150075_1150414_-	outer membrane protein assembly factor BamE	NA	NA	NA	NA
WP_000880965.1\|1150562_1152224_-	DNA repair protein RecN	NA	NA	NA	NA
WP_001059155.1\|1152309_1153188_-	NAD(+) kinase	NA	NA	NA	NA
WP_001518875.1\|1153310_1153901_+	nucleotide exchange factor GrpE	NA	NA	NA	NA
WP_000271804.1\|1153941_1154547_-	hypothetical protein	NA	NA	NA	NA
WP_127908301.1\|1154676_1155963_-	HlyC/CorC family transporter	NA	NA	NA	NA
WP_001537507.1\|1155982_1156774_-	inner membrane protein YpjD	NA	NA	NA	NA
WP_000460060.1\|1156939_1158301_+	signal recognition particle protein	NA	NA	NA	NA
WP_000256453.1\|1158552_1158801_+	30S ribosomal protein S16	NA	NA	NA	NA
WP_000043266.1\|1158819_1159368_+	ribosome maturation factor RimM	NA	NA	NA	NA
WP_000469802.1\|1159412_1160180_+\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
WP_000065257.1\|1160220_1160568_+	50S ribosomal protein L19	NA	NA	NA	NA
WP_001030993.1\|1160724_1161945_-	diguanylate cyclase DgcN	A0A2K8I9Y5	Pseudomonas_phage	1.7e-07	37.0
WP_001212373.1\|1161937_1162456_-	YfiR family protein	NA	NA	NA	NA
WP_001168062.1\|1162895_1163966_+	3-deoxy-7-phosphoheptulonate synthase AroF	A0A0F6R6T6	Escherichia_coli_O157_typing_phage	2.4e-90	51.8
WP_000225183.1\|1163975_1165097_+	bifunctional chorismate mutase/prephenate dehydrogenase	NA	NA	NA	NA
WP_000210975.1\|1165154_1166063_+	SMP-30/gluconolactonase/LRE family protein	NA	NA	NA	NA
WP_000200087.1\|1166023_1167184_-	bifunctional chorismate mutase/prephenate dehydratase	NA	NA	NA	NA
WP_010989056.1\|1167283_1167331_-	hypothetical protein	NA	NA	NA	NA
WP_000178449.1\|1167434_1167773_-	ribosome-associated translation inhibitor RaiA	NA	NA	NA	NA
WP_000197660.1\|1168044_1168782_-	outer membrane protein assembly factor BamD	NA	NA	NA	NA
WP_000079130.1\|1168913_1169894_+	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	NA	NA	NA	NA
WP_000992634.1\|1169890_1170622_+	polyphenol oxidase	NA	NA	NA	NA
WP_001235092.1\|1170751_1173325_+	ATP-dependent chaperone ClpB	H6X3M6	Enterobacteria_phage	2.6e-127	35.5
WP_023211702.1\|1179327_1180131_+	2,5-didehydrogluconate reductase DkgB	A0A1V0SDE7	Indivirus	5.1e-37	34.6
WP_000648518.1\|1180152_1181067_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_001127560.1\|1181171_1182347_+	MFS transporter	NA	NA	NA	NA
WP_001230970.1\|1182478_1183279_+	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA
WP_000207237.1\|1183356_1184127_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_000644706.1\|1184182_1185550_-	murein transglycosylase D	A0A0A7NU10	Lactobacillus_phage	1.4e-10	33.0
WP_001052769.1\|1185621_1186377_-	hydroxyacylglutathione hydrolase	NA	NA	NA	NA
WP_000801242.1\|1186411_1187134_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_000917872.1\|1187130_1187598_-	ribonuclease HI	J9Q745	Salmonella_phage	4.7e-51	58.9
WP_001670675.1\|1187661_1188393_+	DNA polymerase III subunit epsilon	A0A1X9SH08	Bradyrhizobium_phage	6.4e-39	39.9
WP_000367632.1\|1188923_1189967_-	ImpA family type VI secretion system protein	NA	NA	NA	NA
WP_000145239.1\|1189977_1190973_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_000371505.1\|1190969_1192853_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA

DBSCAN-SWA_2

1817461 : 1826991

Dickeya_phage(16.67%)

protease,integrase

attL 1818712:1818726|attR 1832187:1832201

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001201759.1\|1817461_1818580_+	macrolide transporter subunit MacA	A0A140XAI1	Dickeya_phage	8.1e-09	39.8
WP_000125879.1\|1818576_1820523_+	macrolide ABC transporter ATP-binding protein/permease MacB	G9BWD6	Planktothrix_phage	2.0e-39	43.1
1818712:1818726	attL	NA	NA	NA	NA
WP_000447499.1\|1820652_1820874_-	cold shock-like protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	9.3e-18	64.2
WP_000520789.1\|1821197_1821518_+\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	4.5e-13	45.7
WP_000934064.1\|1821548_1823825_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	6.2e-165	42.3
WP_000274276.1\|1824323_1824854_-	hypothetical protein	NA	NA	NA	NA
WP_001117984.1\|1826254_1826452_-	hypothetical protein	NA	NA	NA	NA
WP_011233091.1\|1826613_1826991_-\|integrase	integrase	A0A077KET4	Ralstonia_phage	2.6e-20	41.0
1832187:1832201	attR	NA	NA	NA	NA

DBSCAN-SWA_3

1898265 : 1944703

Salmonella_phage(72.13%)

holin,tail,capsid,lysis,integrase

attL 1885083:1885098|attR 1923708:1923723

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1885083:1885098	attL	NA	NA	NA	NA
WP_001262313.1\|1898265_1899558_-\|integrase	site-specific integrase	S4TSP2	Salmonella_phage	5.0e-252	99.8
WP_000065276.1\|1899602_1899851_-	excisionase family protein	S4TND0	Salmonella_phage	4.7e-42	100.0
WP_001754984.1\|1899891_1900131_-	DUF4060 family protein	S4TR31	Salmonella_phage	9.7e-37	96.2
WP_010989138.1\|1900136_1901018_-	Dam family site-specific DNA-(adenine-N6)-methyltransferase	A0A0M4R347	Salmonella_phage	1.2e-153	93.0
WP_000034527.1\|1901014_1902079_-	DGQHR domain-containing protein	T1SBJ4	Salmonella_phage	6.3e-152	74.6
WP_000187053.1\|1902156_1902837_-	YqaJ viral recombinase family protein	A0A0M3ULE0	Salmonella_phage	1.9e-130	98.7
WP_001764962.1\|1902833_1903619_-	phage recombination protein Bet	A0A0M4RD39	Salmonella_phage	9.7e-150	99.6
WP_000995349.1\|1903624_1903921_-	host-nuclease inhibitor protein Gam	A0A0M5M5Z9	Salmonella_phage	4.4e-47	96.9
WP_000186242.1\|1904011_1904212_-	cell division protein FtsZ	G8C7T2	Escherichia_phage	2.4e-12	48.4
WP_001009036.1\|1904500_1904905_-	transcriptional regulator	H6WRX4	Salmonella_phage	7.1e-72	99.3
WP_000869364.1\|1905034_1905271_+	Cro/Cl family transcriptional regulator	H6WRX5	Salmonella_phage	1.8e-38	100.0
WP_001574095.1\|1905236_1905611_+	hypothetical protein	S4TTD7	Salmonella_phage	3.9e-64	99.2
WP_001681803.1\|1905695_1906679_+	hypothetical protein	H6WRX7	Salmonella_phage	2.1e-162	99.7
WP_000800010.1\|1906681_1907431_+	ATP-binding protein	S4TNF5	Salmonella_phage	3.6e-138	99.6
WP_000113623.1\|1907441_1907789_+	DUF977 family protein	H6WRX9	Salmonella_phage	4.8e-53	90.4
WP_000065105.1\|1907785_1908310_+	ead/Ea22-like family protein	A0A220NQV2	Salmonella_phage	1.8e-91	99.4
WP_000445792.1\|1908309_1908783_+	class I SAM-dependent methyltransferase	H9C170	Pectobacterium_phage	1.6e-67	80.1
WP_000208074.1\|1908786_1909359_+	DUF550 domain-containing protein	S4TSR6	Salmonella_phage	1.3e-66	68.0
WP_000509711.1\|1910204_1910384_+	hypothetical protein	NA	NA	NA	NA
WP_000963896.1\|1910394_1910892_+	type II toxin-antitoxin system death-on-curing family toxin	NA	NA	NA	NA
WP_001217670.1\|1911076_1911316_+	DinI family protein	H6WRY5	Salmonella_phage	3.9e-38	100.0
WP_000929790.1\|1911650_1912253_+	DUF1367 family protein	S4TTI0	Salmonella_phage	7.5e-110	99.5
WP_001096560.1\|1912461_1913073_+	recombination protein NinG	A0A0M4RU10	Salmonella_phage	2.5e-92	99.5
WP_001617856.1\|1913069_1913216_+	YlcG family protein	A0A0M5M7B2	Salmonella_phage	4.3e-19	97.9
WP_001047634.1\|1913205_1914003_+	antitermination protein	A0A0M4S661	Salmonella_phage	3.4e-150	99.2
WP_162096904.1\|1914407_1914749_+\|holin	phage holin, lambda family	Q8SBE1	Shigella_phage	9.6e-46	80.4
WP_046597900.1\|1914751_1915378_+	glycoside hydrolase family 19 protein	Q858F0	Salmonella_phage	4.2e-95	81.2
WP_046597901.1\|1915374_1915860_+\|lysis	lysis protein	Q8HA85	Salmonella_phage	7.0e-74	90.7
WP_000381863.1\|1916059_1916323_+	hypothetical protein	NA	NA	NA	NA
WP_001118125.1\|1916392_1917022_+	hypothetical protein	A0A0M3ULJ9	Salmonella_phage	9.3e-111	99.5
WP_023203961.1\|1917024_1918647_+	hypothetical protein	A0A0M5M1R6	Salmonella_phage	0.0e+00	99.6
WP_000113509.1\|1918646_1920116_+	DUF1073 domain-containing protein	A0A0M4S6U1	Salmonella_phage	5.8e-281	99.4
WP_149134875.1\|1920000_1920738_+\|capsid	minor capsid protein	A0A0M4REK0	Salmonella_phage	1.2e-109	98.0
WP_046597884.1\|1920752_1921985_+	DUF2213 domain-containing protein	A0A0M4R5A6	Salmonella_phage	1.8e-227	99.0
WP_000128060.1\|1921989_1922487_+	hypothetical protein	A0A0M4QWZ6	Salmonella_phage	8.7e-88	99.4
WP_000627464.1\|1922498_1923440_+	DUF2184 domain-containing protein	A0A0M3ULD3	Salmonella_phage	3.1e-179	100.0
WP_001040702.1\|1923481_1923850_+	hypothetical protein	A0A0M4RTX5	Salmonella_phage	8.7e-61	100.0
1923708:1923723	attR	NA	NA	NA	NA
WP_001125675.1\|1923815_1924223_+	DUF4054 domain-containing protein	A0A0M5M3S2	Salmonella_phage	7.1e-72	97.8
WP_046598304.1\|1924219_1924774_+	hypothetical protein	A0A0M4S631	Salmonella_phage	4.1e-94	99.5
WP_001142488.1\|1924760_1925150_+	hypothetical protein	A0A0M3ULK0	Salmonella_phage	6.0e-68	98.4
WP_000389379.1\|1925124_1925688_+	hypothetical protein	A0A0M4R331	Salmonella_phage	8.9e-81	75.3
WP_046597885.1\|1925691_1926837_+	DUF3383 domain-containing protein	A0A2H4J8G4	uncultured_Caudovirales_phage	4.5e-164	75.3
WP_046597886.1\|1926848_1927289_+	DUF3277 family protein	A0A2H4J619	uncultured_Caudovirales_phage	7.8e-56	73.3
WP_046597887.1\|1927292_1927745_+	hypothetical protein	A0A0M4S6U8	Salmonella_phage	6.5e-58	77.2
WP_046597888.1\|1927922_1929875_+	lytic transglycosylase catalytic	A0A0M4REK7	Salmonella_phage	2.7e-169	52.5
WP_046597889.1\|1929874_1930525_+	bacteriophage protein	A0A0M3ULD5	Salmonella_phage	8.0e-57	61.1
WP_000388505.1\|1930528_1930831_+	hypothetical protein	A0A2H4J495	uncultured_Caudovirales_phage	2.0e-26	57.0
WP_046597890.1\|1930833_1931865_+	hypothetical protein	A0A2H4J1B2	uncultured_Caudovirales_phage	1.1e-97	51.4
WP_046597891.1\|1931861_1932203_+	hypothetical protein	A0A2H4J1A5	uncultured_Caudovirales_phage	3.8e-18	50.5
WP_052746205.1\|1932209_1932527_-	Arc family DNA-binding protein	Q76H48	Enterobacteria_phage	2.8e-07	48.4
WP_077929530.1\|1932642_1932807_+	Arc family DNA-binding protein	NA	NA	NA	NA
WP_046597892.1\|1932879_1933440_+	hypothetical protein	B6SCX2	Bacteriophage	3.2e-30	56.1
WP_046597893.1\|1933511_1934258_+	phage-like protein	A0A0P0ZDC0	Stx2-converting_phage	1.6e-69	59.6
WP_046597894.1\|1934321_1935077_+	translation initiation factor IF-2	A0A0M5M1K7	Salmonella_phage	1.3e-103	78.1
WP_023223256.1\|1935076_1935430_+	hypothetical protein	A0A0M4R339	Salmonella_phage	6.0e-59	96.6
WP_046597895.1\|1935430_1936630_+	bacteriophage protein	A0A0M4RD32	Salmonella_phage	6.5e-214	97.5
WP_000049936.1\|1936626_1937307_+	DUF2612 domain-containing protein	A0A0M5M1K4	Salmonella_phage	8.1e-129	98.7
WP_046598052.1\|1937306_1938521_+	hypothetical protein	A0A0M3ULD8	Salmonella_phage	1.3e-73	73.3
WP_046593875.1\|1938535_1939054_+\|tail	tail protein	A0A0U2QV64	Escherichia_phage	6.6e-46	50.9
WP_046593874.1\|1939115_1939331_+	helix-turn-helix domain-containing protein	S4TTF2	Salmonella_phage	2.2e-27	92.5
WP_000364380.1\|1939446_1939623_-	AlpA family phage regulatory protein	NA	NA	NA	NA
WP_042949555.1\|1939664_1939976_+	excisionase family DNA-binding protein	F1C5B3	Cronobacter_phage	1.0e-06	53.6
WP_024142956.1\|1939998_1940421_-	hypothetical protein	M1FPN8	Enterobacteria_phage	2.4e-30	51.4
WP_020898641.1\|1940469_1941303_-	protein rexA	M1FPD4	Enterobacteria_phage	3.5e-57	43.8
WP_020898642.1\|1941424_1941664_-	DinI family protein	K7PKM2	Enterobacterial_phage	8.5e-33	91.1
WP_000193786.1\|1942090_1944703_+	aminopeptidase N	A0A0P0IY26	Acinetobacter_phage	6.3e-20	22.8

DBSCAN-SWA_4

2121165 : 2129358

Escherichia_phage(42.86%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000444503.1\|2121165_2122416_+	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	1.1e-19	92.6
WP_000915986.1\|2122874_2123999_+	type III secretion system effector SopF	NA	NA	NA	NA
WP_011233074.1\|2124945_2125359_+	subtilase cytotoxin subunit B	A0A0U2KD34	Escherichia_phage	1.4e-19	38.6
WP_011233073.1\|2125375_2126104_+	pertussis-like toxin subunit ArtA	A0A0U2KD26	Escherichia_phage	4.1e-62	52.9
WP_000158843.1\|2126295_2126838_+	glycoside hydrolase family 108 protein	A0A0U2S643	Escherichia_phage	6.2e-71	67.0
WP_001277616.1\|2126985_2127363_-	DUF1353 domain-containing protein	I1TQ41	Pseudomonas_phage	2.2e-14	38.4
WP_011233072.1\|2127435_2128245_-	cytolethal distending toxin S-CDT	A5LH53	Enterobacteria_phage	4.2e-63	50.4
WP_000497451.1\|2129118_2129358_-	virulence protein MsgA	K7P6H1	Enterobacteria_phage	8.5e-33	88.6

DBSCAN-SWA_5

2833260 : 2840488

Morganella_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001157323.1\|2833260_2834691_-	DNA cytosine methyltransferase	E5E3X6	Burkholderia_phage	1.0e-104	57.4
WP_000377044.1\|2834764_2835460_-	phosphohydrolase	S4W232	Pandoravirus	2.8e-07	27.5
WP_001080667.1\|2836501_2837680_+	porin OmpS1	Q1MVN1	Enterobacteria_phage	2.3e-107	56.7
WP_024131163.1\|2837940_2838129_-	hypothetical protein	NA	NA	NA	NA
WP_000208509.1\|2838139_2838352_-	cold-shock protein	A0A1W6JNX5	Morganella_phage	3.9e-21	70.0
WP_000457650.1\|2838797_2840066_-	Y-family DNA polymerase	I6RSM4	Salmonella_phage	1.3e-225	91.7
WP_000394197.1\|2840068_2840488_-	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	8.5e-36	60.5

DBSCAN-SWA_6

2930159 : 2937815

Enterobacteria_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000126347.1\|2930159_2931473_-	lipopolysaccharide biosynthesis protein RfbH	H8ZJ36	Ostreococcus_tauri_virus	7.0e-52	35.1
WP_000565907.1\|2931499_2932579_-	CDP-glucose 4,6-dehydratase	A0A222YY99	Synechococcus_phage	1.7e-16	24.1
WP_000648782.1\|2932583_2933357_-	glucose-1-phosphate cytidylyltransferase	NA	NA	NA	NA
WP_000018223.1\|2933372_2934347_-	CDP-6-deoxy-delta-3,4-glucoseen reductase	NA	NA	NA	NA
WP_000973711.1\|2934352_2934904_-	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	7.7e-53	58.6
WP_000857533.1\|2934904_2935783_-	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	6.0e-108	65.2
WP_001023655.1\|2935830_2936730_-	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	4.7e-31	36.3
WP_000697846.1\|2936729_2937815_-	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	1.6e-102	53.9

DBSCAN-SWA_7

3016284 : 3025455

Enterobacteria_phage(66.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000195335.1\|3016284_3018318_+\|tRNA	methionine--tRNA ligase	A0A1V0SDF2	Indivirus	1.0e-54	27.6
WP_000703141.1\|3018558_3019017_+	YehR family lipoprotein	Q9EYF5	Enterobacteria_phage	2.4e-52	71.9
WP_001265354.1\|3019188_3019719_+	YehR family lipoprotein	NA	NA	NA	NA
WP_000950413.1\|3019775_3020243_-	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	3.9e-74	90.3
WP_000598637.1\|3020289_3021009_-	two-component system response regulator BtsR	NA	NA	NA	NA
WP_023211884.1\|3021005_3022691_-	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	4.0e-278	88.6
WP_001240418.1\|3022913_3023645_+	HTH-type transcriptional regulator MlrA	Q9EYF2	Enterobacteria_phage	4.5e-101	87.9
WP_001261696.1\|3023704_3023812_+	protein YohO	NA	NA	NA	NA
WP_000824856.1\|3023792_3024524_-	ABC transporter permease	NA	NA	NA	NA
WP_000569167.1\|3024507_3025455_-	ABC transporter ATP-binding protein	F2Y1V5	Organic_Lake_phycodnavirus	3.7e-10	27.8

DBSCAN-SWA_8

3254734 : 3260765

Salmonella_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000377775.1\|3254734_3255676_+	membrane protein	E7DYY8	Enterobacteria_phage	2.7e-146	87.5
WP_001682026.1\|3256918_3257308_+	GtrA family protein	A0A192Y6N5	Salmonella_phage	6.9e-56	91.5
WP_000703599.1\|3257276_3257531_+	glycosyltransferase	A8CG95	Salmonella_phage	3.1e-25	79.5
WP_000400612.1\|3257547_3259470_+	acyltransferase	A0A1R3Y5Q6	Salmonella_virus	1.9e-300	77.5
WP_106417236.1\|3260459_3260603_-	hypothetical protein	A0A1R3Y5S2	Salmonella_virus	9.0e-14	87.8
WP_106417237.1\|3260618_3260765_-	hypothetical protein	A0A1R3Y5S2	Salmonella_virus	1.1e-14	73.9

DBSCAN-SWA_9

3929086 : 4012024

Enterobacteria_phage(80.39%)

transposase,protease,holin,tRNA,portal,tail,capsid,integrase,terminase,head,plate

attL 3966429:3966445|attR 4018783:4018799

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000218449.1\|3929086_3929899_-\|tRNA	tRNA isopentenyl-2-thiomethyl-A-37 hydroxylase MiaE	NA	NA	NA	NA
WP_000002940.1\|3929910_3930327_-	ribonuclease E inhibitor RraB	NA	NA	NA	NA
WP_000103041.1\|3930492_3931497_+	ornithine carbamoyltransferase	NA	NA	NA	NA
WP_000583456.1\|3931571_3932024_-	YhcH/YjgK/YiaL family protein	NA	NA	NA	NA
WP_000410839.1\|3932698_3933919_+	arginine deiminase	NA	NA	NA	NA
WP_000428752.1\|3933929_3934862_+	carbamate kinase	NA	NA	NA	NA
WP_000237031.1\|3934973_3935978_+	ornithine carbamoyltransferase	NA	NA	NA	NA
WP_000514427.1\|3936033_3937434_+	YfcC family protein	NA	NA	NA	NA
WP_000666051.1\|3937620_3938109_+	arginine repressor	NA	NA	NA	NA
WP_000249504.1\|3938199_3938301_+	pyr operon leader peptide	NA	NA	NA	NA
WP_000013055.1\|3938336_3939272_+	aspartate carbamoyltransferase	M1HWF9	Paramecium_bursaria_Chlorella_virus	6.5e-52	39.2
WP_000148563.1\|3939284_3939746_+	aspartate carbamoyltransferase regulatory subunit	NA	NA	NA	NA
WP_000047544.1\|3939822_3940209_+	2-iminobutanoate/2-iminopropanoate deaminase	NA	NA	NA	NA
WP_000252555.1\|3940283_3940730_+\|transposase	transposase	NA	NA	NA	NA
WP_113771961.1\|3943694_3943793_-	mgtA regulatory leader peptide MgtL	NA	NA	NA	NA
WP_001181303.1\|3943937_3944885_+	HTH-type transcriptional regulator TreR	C6ZCU4	Enterobacteria_phage	1.2e-13	21.5
WP_000048813.1\|3945022_3946441_+	PTS trehalose transporter subunit IIBC	NA	NA	NA	NA
WP_000155064.1\|3946490_3948143_+	alpha,alpha-phosphotrehalase	NA	NA	NA	NA
WP_000187826.1\|3948551_3950690_+	anaerobic ribonucleoside-triphosphate reductase	A0A2I7QNQ7	Vibrio_phage	1.2e-266	64.6
WP_001009172.1\|3950906_3951371_+	anaerobic ribonucleoside-triphosphate reductase-activating protein	A0A2D0YLR2	Vibrio_phage	7.9e-51	56.5
WP_000220578.1\|3951374_3951659_-	type II toxin-antitoxin system RelE/ParE family toxin	A0A2H4JBF4	uncultured_Caudovirales_phage	8.6e-32	70.2
WP_000212724.1\|3951648_3951891_-	type II toxin-antitoxin system RelB/DinJ family antitoxin	A0A2H4JBG1	uncultured_Caudovirales_phage	5.6e-16	51.2
WP_001212144.1\|3951968_3953882_-	BglG family transcription antiterminator	NA	NA	NA	NA
WP_000779266.1\|3953898_3954639_-	KDGP aldolase family protein	NA	NA	NA	NA
WP_001139183.1\|3954635_3955754_-	DgaE family pyridoxal phosphate-dependent ammonia lyase	NA	NA	NA	NA
WP_000459927.1\|3955737_3956871_-	amidohydrolase/deacetylase family metallohydrolase	NA	NA	NA	NA
WP_000392131.1\|3956929_3957574_-	DUF4310 family protein	NA	NA	NA	NA
WP_000478578.1\|3957585_3958362_-	DUF4311 domain-containing protein	NA	NA	NA	NA
WP_000975187.1\|3958384_3958687_-	DUF4312 family protein	NA	NA	NA	NA
WP_000435389.1\|3958686_3959049_-	hypothetical protein	NA	NA	NA	NA
WP_001255103.1\|3959059_3959398_-	glycine dehydrogenase	NA	NA	NA	NA
WP_001232231.1\|3959675_3960062_-	cytochrome b562	NA	NA	NA	NA
WP_000852994.1\|3960159_3961512_-\|protease	metalloprotease PmbA	NA	NA	NA	NA
WP_023211864.1\|3961607_3962159_+	ribosome-associated protein	NA	NA	NA	NA
WP_001219824.1\|3962265_3963657_-	UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase	NA	NA	NA	NA
WP_000853764.1\|3963831_3964830_+	class 1 fructose-bisphosphatase	A0A1V0SKX4	Klosneuvirus	1.3e-69	42.4
WP_000055079.1\|3965056_3965587_+	inorganic diphosphatase	A0A2H4J8U1	uncultured_Caudovirales_phage	4.2e-56	63.3
WP_000977193.1\|3965996_3967160_+	metallo-dependent hydrolase	NA	NA	NA	NA
3966429:3966445	attL	NA	NA	NA	NA
WP_000203131.1\|3967156_3968365_+	MFS transporter	NA	NA	NA	NA
WP_024146873.1\|3968500_3969496_-\|integrase	tyrosine-type recombinase/integrase	A0A0A7NQ69	Enterobacteria_phage	5.3e-193	99.7
WP_021580386.1\|3969562_3969862_-	helix-turn-helix transcriptional regulator	A0A0A7NPW3	Enterobacteria_phage	1.2e-44	100.0
WP_001158283.1\|3969970_3970396_+	regulatory protein	A0A0A7NPS5	Enterobacteria_phage	9.1e-78	100.0
WP_023210417.1\|3970433_3970784_+	DUF4761 family protein	A0A0A7NV42	Enterobacteria_phage	1.1e-57	95.7
WP_023210418.1\|3970794_3971073_+	hypothetical protein	A0A0A7NRX5	Enterobacteria_phage	1.1e-34	80.4
WP_000514277.1\|3971084_3971327_+	DUF4754 family protein	A0A0A7NQ71	Enterobacteria_phage	2.3e-38	100.0
WP_023210419.1\|3971323_3971437_+	hypothetical protein	A0A0A7NPW7	Enterobacteria_phage	4.3e-11	97.3
WP_023210420.1\|3971529_3971940_+	hypothetical protein	NA	NA	NA	NA
WP_000985718.1\|3971962_3972166_+	hypothetical protein	A0A0A7NPS8	Enterobacteria_phage	1.5e-30	97.0
WP_023210421.1\|3972162_3972408_+	winged helix-turn-helix domain-containing protein	A0A0A7NV47	Enterobacteria_phage	6.9e-38	93.8
WP_023210422.1\|3972404_3972719_+	hypothetical protein	A0A0A7NRX6	Enterobacteria_phage	5.2e-38	86.7
WP_023210423.1\|3972758_3973244_-	hypothetical protein	NA	NA	NA	NA
WP_077910974.1\|3973469_3974087_+	hypothetical protein	S5MQL6	Escherichia_phage	6.9e-10	50.6
WP_023210424.1\|3974083_3974449_+	hypothetical protein	A0A0A7NRY1	Enterobacteria_phage	6.6e-61	96.7
WP_023210425.1\|3974455_3977278_+	replication endonuclease	A0A0A7NQ77	Enterobacteria_phage	0.0e+00	96.5
WP_023210426.1\|3977354_3978314_+	plasmid partition protein	A0A0A7NPX4	Enterobacteria_phage	4.6e-178	98.4
WP_012907691.1\|3978318_3978630_+	chromosome partitioning protein	A0A0A7NPT5	Enterobacteria_phage	1.9e-48	94.2
WP_031609932.1\|3978720_3979224_-	DUF4760 domain-containing protein	NA	NA	NA	NA
WP_046593830.1\|3979930_3980977_-\|portal	phage portal protein	A0A0A7NPT9	Enterobacteria_phage	3.3e-206	99.7
WP_000613768.1\|3980976_3982728_-\|terminase	terminase	A0A0A7NV54	Enterobacteria_phage	0.0e+00	99.8
WP_001262673.1\|3982882_3983719_+\|capsid	phage capsid scaffolding protein	A0A0A7NRY7	Enterobacteria_phage	2.7e-150	100.0
WP_001055104.1\|3983742_3984795_+\|capsid	phage major capsid protein, P2 family	A0A0A7NQ82	Enterobacteria_phage	1.3e-194	97.7
WP_000632332.1\|3984840_3985641_+\|terminase	terminase	A0A0A7NPX9	Enterobacteria_phage	1.4e-124	88.3
WP_000063103.1\|3985742_3986237_+\|head	head completion/stabilization protein	A0A0A7NPU2	Enterobacteria_phage	1.2e-89	99.4
WP_000865513.1\|3986236_3986437_+\|tail	phage tail protein	A0A0A7NV57	Enterobacteria_phage	1.3e-31	98.5
WP_000104350.1\|3986439_3986763_+\|holin	holin	A0A0A7NRY9	Enterobacteria_phage	1.6e-50	99.1
WP_000072327.1\|3986759_3987152_+	M15 family metallopeptidase	A0A0A7NQ86	Enterobacteria_phage	5.8e-71	100.0
WP_000780546.1\|3987148_3987556_+	DUF2570 domain-containing protein	A0A0A7NPY2	Enterobacteria_phage	6.1e-63	94.1
WP_023210427.1\|3987693_3988161_+\|tail	phage tail protein	A0A0A7NPU6	Enterobacteria_phage	1.0e-85	99.4
WP_000356343.1\|3988153_3988789_+	phage virion morphogenesis protein	A0A0A7NV60	Enterobacteria_phage	3.1e-114	99.5
WP_001271928.1\|3988785_3989367_+\|plate	phage baseplate assembly protein V	A0A0A7NRZ3	Enterobacteria_phage	2.5e-102	97.9
WP_000213447.1\|3989363_3989714_+\|plate	baseplate assembly protein	A0A0A7NQ90	Enterobacteria_phage	9.2e-60	100.0
WP_023210428.1\|3989717_3990614_+\|plate	phage baseplate assembly protein	A0A0A7NPY5	Enterobacteria_phage	2.5e-154	97.7
WP_023210429.1\|3990606_3991137_+\|tail	phage tail protein I	A0A0A7NPV1	Enterobacteria_phage	1.1e-91	97.5
WP_023210430.1\|3991139_3993077_+\|tail	bacteriophage tail protein	A0A0A7NV63	Enterobacteria_phage	1.0e-160	82.4
WP_023211037.1\|3993083_3993491_+\|tail	phage tail fiber protein	A0A1B0V844	Salmonella_phage	3.4e-58	83.5
WP_023211704.1\|3993698_3994421_-	SPI-1 type III secretion system guanine nucleotide exchange factor SopE	NA	NA	NA	NA
WP_023210925.1\|3994634_3994883_+	Hin recombinase	A0A0A7NPV4	Enterobacteria_phage	3.5e-37	97.6
WP_023210436.1\|3994918_3995407_-\|tail	phage tail protein	A0A0A7NV65	Enterobacteria_phage	4.0e-85	98.1
WP_023210435.1\|3995419_3998227_-\|tail	phage tail tape measure protein	A0A0A7NRZ9	Enterobacteria_phage	0.0e+00	98.0
WP_000763327.1\|3998213_3998342_-\|tail	GpE family phage tail protein	A0A0A7NQ96	Enterobacteria_phage	3.0e-16	97.6
WP_000665308.1\|3998377_3998743_-\|tail	tail protein	A0A0A7NPZ0	Enterobacteria_phage	3.8e-56	97.5
WP_000290450.1\|3998797_3999310_-\|tail	phage major tail tube protein	A0A0A7NPV8	Enterobacteria_phage	3.2e-93	100.0
WP_000005390.1\|3999309_4000494_-\|tail	phage tail sheath family protein	A0A0A7NV69	Enterobacteria_phage	1.5e-226	99.7
WP_023210434.1\|4000651_4001761_+	phage late control D family protein	A0A0A7NQ97	Enterobacteria_phage	6.3e-195	94.3
WP_000488106.1\|4001803_4002064_+	ogr/Delta-like zinc finger family protein	NA	NA	NA	NA
WP_000078923.1\|4002254_4002395_+	Hok/Gef family protein	A0A0A7NPZ4	Enterobacteria_phage	4.5e-18	95.7
WP_024146876.1\|4002546_4002828_-	hypothetical protein	NA	NA	NA	NA
WP_001219167.1\|4003127_4003472_-	gamma-glutamylcyclotransferase	NA	NA	NA	NA
WP_000060832.1\|4003474_4007254_-	autotransporter assembly complex protein TamB	NA	NA	NA	NA
WP_001120232.1\|4007250_4008984_-	autotransporter assembly complex protein TamA	NA	NA	NA	NA
WP_000051467.1\|4009196_4009835_+	peptide-methionine (S)-S-oxide reductase MsrA	NA	NA	NA	NA
WP_000934974.1\|4010024_4011368_+	HlyC/CorC family transporter	NA	NA	NA	NA
WP_138082281.1\|4011336_4011609_+	hypothetical protein	NA	NA	NA	NA
WP_000502119.1\|4011565_4012024_+\|transposase	IS200/IS605-like element IS200F family transposase	I4AZI8	Saccharomonospora_phage	1.0e-13	31.5
4018783:4018799	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP019185

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection