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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP019178 Salmonella enterica subsp. enterica serovar Chester str. ATCC 11997 chromosome, complete genome 3 crisprs PD-DExK,WYL,cas3,csa3,DEDDh,DinG 0 0 9 0

Results visualization

1. NZ_CP019178
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP019178_1 175056-175137 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP019178_2 577291-577391 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP019178_3 932310-932397 Unclear I-E
1 spacers
cas3

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1095298 : 1158393 62 Salmonella_phage(88.1%) capsid,plate,tRNA,tail,integrase,terminase,portal,head attL 1095132:1095181|attR 1129403:1129452
DBSCAN-SWA_2 1555802 : 1611400 69 Salmonella_phage(62.22%) capsid,lysis,plate,protease,tail,integrase,holin,terminase,head attL 1552331:1552346|attR 1615531:1615546
DBSCAN-SWA_3 1682816 : 1691987 10 Enterobacteria_phage(66.67%) tRNA NA
DBSCAN-SWA_4 1759209 : 1769716 10 Enterobacteria_phage(37.5%) NA NA
DBSCAN-SWA_5 1852262 : 1859515 8 Morganella_phage(33.33%) NA NA
DBSCAN-SWA_6 1962192 : 1970794 11 Salmonella_phage(28.57%) tail,integrase attL 1956636:1956650|attR 1966910:1966924
DBSCAN-SWA_7 2142025 : 2148687 9 Salmonella_phage(33.33%) NA NA
DBSCAN-SWA_8 2622421 : 2629626 8 Escherichia_phage(42.86%) NA NA
DBSCAN-SWA_9 2789695 : 2888709 94 Enterobacteria_phage(31.48%) capsid,lysis,protease,tRNA,tail,integrase,holin,terminase,portal,head attL 2813857:2813873|attR 2893250:2893266
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage