CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP012344	Salmonella enterica subsp. enterica serovar Choleraesuis str. ATCC 10708, complete genome	2 crisprs	PD-DExK,WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,DEDDh,DinG	0	22	8	0
NZ_CP012345	Salmonella enterica subsp. enterica serovar Choleraesuis str. ATCC 10708 plasmid pCFSAN000679_01, complete sequence	0 crisprs	NA	0	0	1	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP012344_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012344_1

955650-956776

TypeI-E

I-E

Consensus_repeat	Method
GTGTTCCCCGTGCCAGCGGGGATAAACCG	PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRT

18 spacers

cas3,cas8e,cse2gr11

The CRISPR arrays of NZ_CP012344_1

>merge|NZ_CP012344|1|955650-956776|PILER-CR,CRISPRCasFinder,CRT
GTGTTCCCCGTGCCAGCGGGGATAAACCGGAACGAGTAATCTTTGTTTTCCCCGTACCTTCGTGTTCCCCGTGCCAGCGGGGATAAACCGCGAGGATAGTTGTACCAGGTCAGGCCGCGCTGGTGTTCCCCGTGCCAGCGGGGATAAACCGCAAAATCAAAATTTCGAAATAAATGATTGGAAGTGTTCCCCGTGCCAGCGGGGATAAACCGTCAAACGGTTCTGGAACATCTAAAAATACATGGTGTTCCCCGTGCCAGCGGGGATAAACCGCTGGCTGTCTGCGTGATAAATGCAGAGTGTGAGTGTTCCCCGCGCCAGCGGGGATAAACCGCAGGAATTGGGGATGTTACCTGAAGATGTGAAGTGTTCCCCGCGCCAGCGGGGATAAACCGTTCAGAACGATTATATTTTGATTTGTGTTCAGGTGTTCCCCGCGCCAGCGGGGATAAACCGACCGAGAGTGACATTTTCCCACTACTGGCTGGGTGTTCCCCGCGCCAGCGGGGATAAACCGGACGCCATGCGCTACGTAGCGACGCGTGTTGAGTGTTCCCCGCGCCAGCGGGGATAAACCGGAGAGTCGTGGTGAACTGGCAGTGCTCCGGTGGTGTTCCCCGCGCCAGCGGGGATAAACCGAGATTGGCTATTGCGGTAGCATACTGACTCTTGTGTTCCCCGCGCCAGCGGGGATAAACCGATTTTTTGCGGTTCAATCAGCTCATACCACAGGTGTTCCCCGCGCCAGCGGGGATAAACCGACAAAGCCAAGCGCTATATGGCCGGTATTTTTGTGTTCCCCGCGCCAGCGGGGATAAACCGCGCAATGAACTTTGTCGCGCCGCGAGGCGTGCGTGTTCCCCGCGCCAGCGGGGATAAACCGATGGTAAATATGAATTTAATGTCTATCCTGGGGTGTTCCCCGCGCCAGCGGGGATAAACCGCCATGCTCCAGGGTAGCCAACCTGCAAGTAATGTGTTCCCCGCGCCAGCGGGGATAAACCGATCCGACTGTATGCCCAGCAGAACGAGGGCGCGTGTTCCCCGCGCTAGCGGGGATAAACCGCACGAGTGGCAAATTGATTTCGACGAAAAACCGTGTTCCCCGCGCCAACAAGGATAGCCGT

>NZ_CP012344|1|1|955650-956715|PILER-CR
GTGTTCCCCGTGCCAGCGGGGATAAACCG	GAACGAGTAATCTTTGTTTTCCCCGTACCTTC
GTGTTCCCCGTGCCAGCGGGGATAAACCG	CGAGGATAGTTGTACCAGGTCAGGCCGCGCTG
GTGTTCCCCGTGCCAGCGGGGATAAACCG	CAAAATCAAAATTTCGAAATAAATGATTGGAA
GTGTTCCCCGTGCCAGCGGGGATAAACCG	TCAAACGGTTCTGGAACATCTAAAAATACATG
GTGTTCCCCGTGCCAGCGGGGATAAACCG	CTGGCTGTCTGCGTGATAAATGCAGAGTGTGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGGAATTGGGGATGTTACCTGAAGATGTGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTCAGAACGATTATATTTTGATTTGTGTTCAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACCGAGAGTGACATTTTCCCACTACTGGCTGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GACGCCATGCGCTACGTAGCGACGCGTGTTGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GAGAGTCGTGGTGAACTGGCAGTGCTCCGGTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGATTGGCTATTGCGGTAGCATACTGACTCTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTTTTTGCGGTTCAATCAGCTCATACCACAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACAAAGCCAAGCGCTATATGGCCGGTATTTTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCAATGAACTTTGTCGCGCCGCGAGGCGTGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATGGTAAATATGAATTTAATGTCTATCCTGGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCATGCTCCAGGGTAGCCAACCTGCAAGTAAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATCCGACTGTATGCCCAGCAGAACGAGGGCGC
GTGTTCCCCGCGCTAGCGGGGATAAACCG

>NZ_CP012344|1|1|955650-956776|CRISPRCasFinder
GTGTTCCCCGTGCCAGCGGGGATAAACCG	GAACGAGTAATCTTTGTTTTCCCCGTACCTTC
GTGTTCCCCGTGCCAGCGGGGATAAACCG	CGAGGATAGTTGTACCAGGTCAGGCCGCGCTG
GTGTTCCCCGTGCCAGCGGGGATAAACCG	CAAAATCAAAATTTCGAAATAAATGATTGGAA
GTGTTCCCCGTGCCAGCGGGGATAAACCG	TCAAACGGTTCTGGAACATCTAAAAATACATG
GTGTTCCCCGTGCCAGCGGGGATAAACCG	CTGGCTGTCTGCGTGATAAATGCAGAGTGTGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGGAATTGGGGATGTTACCTGAAGATGTGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTCAGAACGATTATATTTTGATTTGTGTTCAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACCGAGAGTGACATTTTCCCACTACTGGCTGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GACGCCATGCGCTACGTAGCGACGCGTGTTGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GAGAGTCGTGGTGAACTGGCAGTGCTCCGGTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGATTGGCTATTGCGGTAGCATACTGACTCTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTTTTTGCGGTTCAATCAGCTCATACCACAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACAAAGCCAAGCGCTATATGGCCGGTATTTTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCAATGAACTTTGTCGCGCCGCGAGGCGTGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATGGTAAATATGAATTTAATGTCTATCCTGGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCATGCTCCAGGGTAGCCAACCTGCAAGTAAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATCCGACTGTATGCCCAGCAGAACGAGGGCGC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CACGAGTGGCAAATTGATTTCGACGAAAAACC
GTGTTCCCCGCGCCAACAAGGATAGCCGT

>NZ_CP012344|1|1|955650-956776|CRT
GTGTTCCCCGTGCCAGCGGGGATAAACCG	GAACGAGTAATCTTTGTTTTCCCCGTACCTTC
GTGTTCCCCGTGCCAGCGGGGATAAACCG	CGAGGATAGTTGTACCAGGTCAGGCCGCGCTG
GTGTTCCCCGTGCCAGCGGGGATAAACCG	CAAAATCAAAATTTCGAAATAAATGATTGGAA
GTGTTCCCCGTGCCAGCGGGGATAAACCG	TCAAACGGTTCTGGAACATCTAAAAATACATG
GTGTTCCCCGTGCCAGCGGGGATAAACCG	CTGGCTGTCTGCGTGATAAATGCAGAGTGTGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGGAATTGGGGATGTTACCTGAAGATGTGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTCAGAACGATTATATTTTGATTTGTGTTCAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACCGAGAGTGACATTTTCCCACTACTGGCTGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GACGCCATGCGCTACGTAGCGACGCGTGTTGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GAGAGTCGTGGTGAACTGGCAGTGCTCCGGTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGATTGGCTATTGCGGTAGCATACTGACTCTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTTTTTGCGGTTCAATCAGCTCATACCACAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACAAAGCCAAGCGCTATATGGCCGGTATTTTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCAATGAACTTTGTCGCGCCGCGAGGCGTGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATGGTAAATATGAATTTAATGTCTATCCTGGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCATGCTCCAGGGTAGCCAACCTGCAAGTAAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATCCGACTGTATGCCCAGCAGAACGAGGGCGC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CACGAGTGGCAAATTGATTTCGACGAAAAACC
GTGTTCCCCGCGCCAACAAGGATAGCCGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012344.1\|WP_000368586.1\|967161_968721_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
NZ_CP012344.1\|WP_000210454.1\|950499_951300_+\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
NZ_CP012344.1\|WP_001541723.1\|958048_958219_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012344.1\|WP_023236952.1\|962142_962877_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NZ_CP012344.1\|WP_000210863.1\|951527_953165_+\|CTP-synthetase	unknown	unknown	gnl\|CDD\|235437
NZ_CP012344.1\|WP_023262367.1\|958555_960355_+\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	unknown	unknown	gnl\|CDD\|182862
NZ_CP012344.1\|WP_020839113.1\|968717_969266_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|187862
NZ_CP012344.1\|WP_023236954.1\|964486_967150_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_CP012344.1\|WP_000832396.1\|944729_945200_-\|fimbrial-protein-SteE	unknown	unknown	gnl\|CDD\|185179
NZ_CP012344.1\|WP_001199961.1\|954681_955353_+\|7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|275126
NZ_CP012344.1\|WP_000842511.1\|949305_949893_-\|fimbrial-protein	unknown	unknown	gnl\|CDD\|185169
NZ_CP012344.1\|WP_077910810.1\|946526_949226_-\|fimbrial-biogenesis-outer-membrane-usher-protein	unknown	unknown	gnl\|CDD\|185176
NZ_CP012344.1\|WP_001044459.1\|945740_946514_-\|fimbrial-protein-StfD	unknown	unknown	gnl\|CDD\|185177
NZ_CP012344.1\|WP_023244651.1\|963089_964043_-\|SPI-1-type-III-secretion-system-effector-SopD	unknown	unknown	gnl\|CDD\|185277
NZ_CP012344.1\|WP_021000726.1\|944196_944733_-\|fimbrial-subunit	unknown	unknown	gnl\|CDD\|185168
NZ_CP012344.1\|WP_000036734.1\|953247_954546_+\|enolase	unknown	unknown	gnl\|CDD\|234617
NZ_CP012344.1\|WP_000108313.1\|957757_958120_-\|6-carboxytetrahydropterin-synthase-QueD	unknown	unknown	gnl\|CDD\|238264
NZ_CP012344.1\|WP_001290649.1\|960354_962067_+\|NADPH-dependent-assimilatory-sulfite-reductase-hemoprotein-subunit	unknown	unknown	gnl\|CDD\|237402
NZ_CP012344.1\|WP_001208002.1\|956873_957671_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|224158
NZ_CP012344.1\|WP_000178270.1\|945214_945721_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|185178

Protein	Function_ID	Function_description	E-value
NZ_CP012344.1\|WP_000368586.1\|967161_968721_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	5.17383e-173
NZ_CP012344.1\|WP_000210454.1\|950499_951300_+\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	1.36327e-159
NZ_CP012344.1\|WP_023236952.1\|962142_962877_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	7.28477e-139
NZ_CP012344.1\|WP_000210863.1\|951527_953165_+\|CTP-synthetase	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
NZ_CP012344.1\|WP_023262367.1\|958555_960355_+\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	gnl\|CDD\|182862	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit.	0
NZ_CP012344.1\|WP_020839113.1\|968717_969266_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	5.28868e-33
NZ_CP012344.1\|WP_023236954.1\|964486_967150_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	0
NZ_CP012344.1\|WP_000832396.1\|944729_945200_-\|fimbrial-protein-SteE	gnl\|CDD\|185179	PRK15276, PRK15276, putative fimbrial subunit SteE; Provisional.	1.41178e-100
NZ_CP012344.1\|WP_001199961.1\|954681_955353_+\|7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	1.43874e-155
NZ_CP012344.1\|WP_000842511.1\|949305_949893_-\|fimbrial-protein	gnl\|CDD\|185169	PRK15261, PRK15261, fimbrial protein SteA; Provisional.	6.76622e-100
NZ_CP012344.1\|WP_077910810.1\|946526_949226_-\|fimbrial-biogenesis-outer-membrane-usher-protein	gnl\|CDD\|185176	PRK15273, PRK15273, fimbrial biogenesis outer membrane usher protein.	0
NZ_CP012344.1\|WP_001044459.1\|945740_946514_-\|fimbrial-protein-StfD	gnl\|CDD\|185177	PRK15274, PRK15274, putative periplasmic fimbrial chaperone protein SteC; Provisional.	0
NZ_CP012344.1\|WP_023244651.1\|963089_964043_-\|SPI-1-type-III-secretion-system-effector-SopD	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0
NZ_CP012344.1\|WP_021000726.1\|944196_944733_-\|fimbrial-subunit	gnl\|CDD\|185168	PRK15260, PRK15260, fimbrial protein SteF; Provisional.	1.26302e-121
NZ_CP012344.1\|WP_000036734.1\|953247_954546_+\|enolase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
NZ_CP012344.1\|WP_000108313.1\|957757_958120_-\|6-carboxytetrahydropterin-synthase-QueD	gnl\|CDD\|238264	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS). Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids, as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after uptake by a carrier-mediated active transport system. Most microbes and plants lack this system and must synthesize folates de novo from guanosine triphosphate. One enzyme from this pathway is PTPS which catalyzes the conversion of dihydroneopterin triphosphate to 6-pyruvoyl tetrahydropterin. The functional enzyme is a hexamer of identical subunits.	2.78454e-58
NZ_CP012344.1\|WP_001290649.1\|960354_962067_+\|NADPH-dependent-assimilatory-sulfite-reductase-hemoprotein-subunit	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0
NZ_CP012344.1\|WP_001208002.1\|956873_957671_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|224158	COG1237, COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only].	5.39566e-102
NZ_CP012344.1\|WP_000178270.1\|945214_945721_-\|hypothetical-protein	gnl\|CDD\|185178	PRK15275, PRK15275, putative fimbrial protein SteD; Provisional.	4.31975e-105

>NZ_CP012344.1|WP_001199961.1|954681_955353_+|7-carboxy-7-deazaguanine-synthase-QueE
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWDKLSDREVSLFSILAKTKESDKWGAASSEDLLAVINRQGYTARHVVITGGEPCIHDLMPLTDLLEKSGFSCQIETSGTHEVRCTPNTWVTVSPKVNMRGGYDVLSQALERANEIKHPVGRVRDIEALDELLATLSDDKPRVIALQPISQKEDATRLCIETCIARNWRLSMQTHKYLNIA
>NZ_CP012344.1|WP_000036734.1|953247_954546_+|enolase
MSKIVKVIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVGAVNGPIAQAILGKDAKDQAGIDKIMIDLDGTENKSNFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKGKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>NZ_CP012344.1|WP_000210863.1|951527_953165_+|CTP-synthetase
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQLAVDIGREHALFMHLTLVPYLAAAGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISMKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIYEEANPAGEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVTVNIKLIDSQDVETRGVEILKDLDAILIPGGFGYRGVEGKIATARYARENNIPYLGICLGMQVALIEFARNVAGMDNANSTEFVPDCKYPVVALITEWRDEDGNVEVRSEKSDLGGTMRLGAQQCQLSDDSLVRQLYGASTIVERHRHRYEVNNMLLKQIEAAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAANEHQKRQAK
>NZ_CP012344.1|WP_000210454.1|950499_951300_+|nucleoside-triphosphate-pyrophosphohydrolase
MTTNHQIDRLLTLMQRLRDPENGCPWDKEQTFASIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFGELSADNSEEVLARWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCSNVGFDWTTLGPVVDKVYEEIDEVMFEARQAVVDQAKLEEEMGDLLFATVNMARHLGTKAELALQKANDKFERRFREVERIVAARGLEMTGVDLETMEEVWQEVKRQEIDL
>NZ_CP012344.1|WP_000842511.1|949305_949893_-|fimbrial-protein
MKSSHFCKLAVTASLVMGIVSGAQAAGSNTAKVTFLGNIVDSPCSVTLDTEDQTVNMGSSIGNGTLSNGKTTINNARTFHIDLEGCTWATEKNMNVVFTTGSGTTAATGATDNLALMKTDGTGAISNVSLAIGDAGKNNIKLGDTYTQAIADLDGDSILDEKQSLNFTAWLVGAATGTVGTGEFSSAANVTISYL
>NZ_CP012344.1|WP_077910810.1|946526_949226_-|fimbrial-biogenesis-outer-membrane-usher-protein
MMNNTWKSVLCPIACGVGMLLSASPYSASGKDIEFNTDFLDVKNRDNVNIAQFSRKGFILPGVYLLQIKINGQTLPQEFPVNWVIPEHDPQGSEVCAEPELVTQLGIKPELAEKLVWITHGERQCLAPDSLKGMDFQADLGHSTLLVNLPQAYMEYSDVDWDPPARWDNGIPGIILDYNINNQLRHDQESGSEEQSISGNGTLGANLGAWRLRADWQASYDHRDDDENTSTLHDQSWSRYYAYRALPTLGAKLTLGESYLQSDVFDSFNYIGASVISDDQMLPPKLRGYAPEIVGIARSNAKVKVSWQGRVLYETQVPAGPFRIQDLNQSVSGTLHVTVEEQNGQTQEFDVNTASVPFLTRPGMVRYKMALGRPQDWDHHPITGTFASAEASWGVTNGWSLYGGAIGESNYQAVALGSGKDLGVVGAVAVDITHSIAHMPQDDGFDGETLQGNSYRISYSRDFDEIDSRLTFAGYRFSEKNFMSMSDYLDAKTYHHLNAGHEKERYTVTYNQNFREQGMSAYFSYSRSTFWDSPDQSNYNLSLSWYFDLGSIKNLSASLNGYRSEYNGDKDDGVYISLSVPWGNDSISYNGTFNGSQHRNQLGYSGHSQNGDNWQLHVGQDEQGAQADGYYSHQGALTDIDLSADYEEGSYRSLGMSLRGGMTLTTQGGALHRGSLAGSTRLLVDTDGIADVPVSGNGSPTSTNIFGKAVIADVGSYSRSLARIDLNKLPEKAEATKSVVQITLTEGAIGYRHFDVVSGEKMMAVFRLADGDFPPFGAEVKNERQQQLGLVADDGNAWLAGVKAGETLKVFWDGAAQCEASLPPTFTPELLANALLLPCKMLEGQPTTAPQKSSPLPAQPLIQEHTQTDGQPAAPVATTTQTPPIPLADNHAVNRKDME
>NZ_CP012344.1|WP_001044459.1|945740_946514_-|fimbrial-protein-StfD
MNKTNHFKRQALIASVLLAAPLVSHSAIVPDRTRVIFNGNENSITVTLKNGNATLPYLAQAWLEDDKFAKDTRYFTALPPLQRIEPKSDGQVKVQPLPAAASLPQDRESLFYFNVREIPPKSDKPNTLQLALQTRIKFFYRPVAVARQVDKTHPWQTKLTLTYQGDGVIFDNPTPFYLVISNAGSKENETASGFKNLLIAPREKVTSPIKGASLGSSPVVGYVDDYGGHRLLVFTCSGNTCKVNEEKTRDAEKKANK
>NZ_CP012344.1|WP_000178270.1|945214_945721_-|hypothetical-protein
MTMLTRWKMLVLLCGGFVTGTEAAGTKTVQLELHLVVTQPPPCTVGGASVEFGDVLTTKVGDASQTKPVGYSLNCDGRASDYLKLQIQGTTTTISGEQVLQTSVQGLGIRIQQAGNKQLVPVGITDWLNFTLSGSNGPELEAVPVKEPTTQLAGGDFNASATLVVDYQ
>NZ_CP012344.1|WP_000832396.1|944729_945200_-|fimbrial-protein-SteE
MKRVLILTLLITQFACADNLTFHGKLINPPACTINNGETLEVSFGSVIIDNIDGVNYLTEIPWTLTCDSSFRDDALTFTLSYLGTATPYSANALTTNVPELGIELQQNGTVFPPGTSLTIDESSLPTLKAVPVKQPGKEPAEGDFEAFATLQVDYQ
>NZ_CP012344.1|WP_021000726.1|944196_944733_-|fimbrial-subunit
MNRIFQTAGHLIGGVMLWAVCNTLPAATPNVHYSGKLVAGACNLVVDNDTMATVDFHTIGSDNFDASGQTTPVPFTLSLQDCKTALANGVLVTFQGIEDSTLPGLLALEPSSEASGFAIGVETAAQQPVSINATEGTAFVLKEGITTINLQARLQKYAGEDVMPGEFKGSATVSFEYQ
>NZ_CP012344.1|WP_001208002.1|956873_957671_+|MBL-fold-metallo-hydrolase
MALRIRVLLENHKGAGADKSLKARPGLSLLVEDESTSILFDTGPDGSFMQNALAMGIDLSDVSAVVLSHGHYDHCGGVPWLPDNSRIICHPDIARERYAAMTFLGITRKIKKLSCEVDYSRYRMMYTRGPLPIGENFIWSGEIPVVAPEAYGIFGGHDAEPDSILDEGVLIYQSTKGLVIITGCGHRGIANIVRHCQNITGIKRIYALVGGFHLRCASPFTLWRVRRFLQEQKPEKLCGCHCTGAWGRLWLPEITAPATGDVLRF
>NZ_CP012344.1|WP_000108313.1|957757_958120_-|6-carboxytetrahydropterin-synthase-QueD
MSTTLYKDFTFEAAHRLPHVPEGHKCGRLHGHSFMVRLEITGEVDPHTGWIMDFADLKAAFKPTYDRLDHYYLNDIPGLSNPTSEVLAKWIWDQVKPVVPLLSAVMVKETCTAGCVYRGE
>NZ_CP012344.1|WP_001541723.1|958048_958219_+|hypothetical-protein
MPFRHVRQAVSGFKGEIFIQRGGHDELSGNKKTAVGYRKAHFLSLTKTILRLVTGN
>NZ_CP012344.1|WP_023262367.1|958555_960355_+|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit
MTTPAPLTGLLPLNPEQLARLQAATTDLTPEQLAWVSGYFWGVLNPRSGAVAVTPAPEGKMPGVTLISASQTGNARRVAEALRDDLLAANLNVTLVNAGDYKFKQIASEKLLVIVTSTQGEGEPPEEAVALHKFLFSKKAPKLENTAFAVFSLGDTSYEFFCQSGKDFDSKLAELGGERLLDRVDADVEYQAAASEWRARVVDVLKSRVPVAAPSQSVATGAVNDIHTSPYTKDAPLTATLSVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPDLVKELVELLWLKGDEPVTVDGKTLPLAEALEWHFELTVNTANIIENYATLTRSESLLPLVGDKAQLQHYAATTPIVDMVRFSPAQLDAQALIDLLRPLTPRLYSIASSQAETENEVHVTVGVVRYDIEGRARAGGASSFLADRVEEEGEVRVFIEHNDNFRLPANPQTPVIMIGPGTGIAPFRAFMQQRAAEGAEGKNWLFFGNPHFTEDFLYQVEWQRYVKEGLLSRIDLAWSRDQKEKIYVQDKLREQGAELWRWINDGAHIYVCGDARRMAADVEKALLEVIAEFGGMDLESADEYLSELRVERRYQRDVY
>NZ_CP012344.1|WP_001290649.1|960354_962067_+|NADPH-dependent-assimilatory-sulfite-reductase-hemoprotein-subunit
MSEKHPGPLVVEGKLSDAERMKLESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAAQKLEPRHAMLLRCRLPGGVITTTQWQAIDKFAADNTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGATYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGLETFKAEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDDKWHLTLFIENGRILDYPGRPLKTGLLEIAKIHQGEFRITANQNLIIASVPESQKAKIETLARDHGLMNAVKPQRENSMACVSFPTCPLAMAEAERFLPSFTDKVEAILEKHGIPDEHIVMRVTGCPNGCGRAMLAEIGLVGKAPGRYNLHLGGNRIGSRIPRMYKENIAEPDILASLDELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDFWE
>NZ_CP012344.1|WP_023236952.1|962142_962877_+|phosphoadenosine-phosphosulfate-reductase
MSQLDLNALNELPKVDRVMALAETNAQLEKLSAEERVAWALENLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYQFIDEITDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNEINKVEPMNRALKELKAQTWFAGLRREQSGSRAHLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>NZ_CP012344.1|WP_023244651.1|963089_964043_-|SPI-1-type-III-secretion-system-effector-SopD
MPVTLSFGNHQNYTLNESRLAHLLSADKEKAIHMGGWDKVQDHFRAEKKDHALEVLHSIIHGQGRGEPGEMEVNVEDINKIYAFKRLQHLACPAHQDLFTIKMDASQTQFLLMVGDTVISQSNIKDILNISDDAVIESMSREERQLFLQICEVIGAKMTWHPELLQESISTLRKEVTGNAQIKAAVYEMMRPAEAPDHPLVEWQDLLTADEKSMLACINAGNFEPTTQFCKIGYQEVQGEVAFSMMHPCISYLLHSYSPFAEFKPTNSGFLKKLNQDYNDYHAKKMFIDVILEKLYLTHERSLHIGKDGCSRNILLT
>NZ_CP012344.1|WP_023236954.1|964486_967150_+|CRISPR-associated-helicase/endonuclease-Cas3
MSIYHYWGKSRRGETNGGDDYHLLCWHSLDVAAVGYWMVINNIYFIDHYLKKLGIQDKEQAAQFFAWILCWHDIGKFAHSFQQLYRHEALNIFNEPTRHYEKIAHTTLGYVLWNSWLSECPELFPPSSLSVRKSKRVMALWMPVTTGHHGRPPEAIQELDHFRQQDKDAARDFLLRIKALFPLITLPEAWDEDEGIDQFQQLSWFISAAVVLADWTGSASRYFPRTAEKMPVDTYWQQALAKAQTAITLFPSAANVSAFTGIETLFPFIQHPTPLQQKALELDINVDGAQLFILEDVTGAGKTEAALILAHRLMAAGKAQGLYFGLPTMATANAMFERMANTWLALYQPDSRPSLILAHSARRLMDRFNQSIWSVTLSGTEEPDEAQPDSQGCAAWFADSNKKALLAEVGVGTLDQAMMAVMPFKHNNLRLLGLSNKILLADEIHACDAWMSRILEGLIERQASNGNATILLSATLSQQQRDKLVAAFSRGVRRSVQAPLLGHDDYPWLTQVTQTELISQRVDTRKEVERSVDIGWLHSEEACLERIGEAVEKGNCIAWIRNSVDDAIRIYRQLQLSKVVATENLLLFHSRFAFHDRQRIESQTLNLFGKQSGAQRAGKVIIATQVIEQSLDIDCDEMISDLAPVDLLIQRAGRLQRHIRDRNGLVKKSGQDERETPVLRILAPEWDDAPRENWLSSAMCNSAYVYPDHGRMWLTQRILREQGTIRMPQSARLLIESVYGEDVNMPVGFAKTEQLQEGKFYCDRAFAGQMLLNFAPGYCAEISDSLPEKMSTRLAEESVTLWLAKIVDSVVTPYASGEHAWEMSVLRVRQSWWNKHKDEFEKLDGEPLRKWCAQQHQDKDFATVIVVTDCAACGYSANEGLIGMMGE
>NZ_CP012344.1|WP_000368586.1|967161_968721_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MDNFSLLTTPWLPVRFKDGSTGKLAPVNLADENVVDIAATRADLQGAAWQFLLGLLQCSIAPKRYKNWEDIWFDGLHADALHKALAPLEHAFQFGAETPSFMQDFEELPDNKITIASLLPETPGIQTTELNTDHFIKRGVMECFCPHCAALALFSMQLNAPSGGQGYRTGLRGGGPLTTLIELQEYQGERQTPLWRKLWLNVMPQDAADLPLPVVYDAAVFPWLAATRTSEPPAHTITTDEQVNKLQAYWGMPRRIRLDFATIRQGVCNICGNNSDELLIQMLVKNYGVNYDRWRHPLTPHRLQIKNSKGFEPVITQPGGLLWRDWLGLSQENPTEKNTEYPAQVIKVFNARELRNIKVGLWGFGADFKKMKIRCWYEHHFPLLMTEGLIPDLRKATQTATRLLSLLRSALKEAWFANAKGARGDFSFIDIDFWNLTQGRFLNLIHDLENGHKPDERLNKWQRELWLFTRCYFDDHVFTNPYESSDLERIMKARKKYFTSSAEKQSAKAAKAKKQEAAE
>NZ_CP012344.1|WP_020839113.1|968717_969266_+|type-I-E-CRISPR-associated-protein-Cse2/CasB
MSIVQEDHKATLRKWHEDLQEKRGARASLRRSKTVNEACLSEGFHLLLMQTHSLWKNKADWHVTALAITAILAAHIKFIDERQSFATQLGQKKSGDNPVMSKLRFSRLSAVKNPDELLRHLRRAVQLLDGSVNLISLADDIFRWCQEQDDLLNHHRRQQRPTEFLRIRWALEYYQAGDNEQD

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Crispr_ID: NZ_CP012344_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012344_2

973034-975139

TypeI-E

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCTAGCGGGGATAAACCG	PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCCGCGCNAGCGGGGATAAACCG	CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	PILER-CR

34 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

The CRISPR arrays of NZ_CP012344_2

>merge|NZ_CP012344|2|973034-975139|PILER-CR,CRISPRCasFinder,CRT,PILER-CR
GTGTTCCCCGCGCTAGCGGGGATAAACCGGCGGACTCCTGCACCTCTTTGAGCCCGTCGATGTGTTCCCCGCGCTAGCGGGGATAAACCGTCAGCGTAGGTTGTTGATGTTCCCACCAGCCCGTGTTCCCCGCGCTAGCGGGGATAAACCGGCCACAATCAGATCGAAACGCTCCGGATCACCGTGTTCCCCGCGCTAGCGGGGATAAACCGTTGTCACTGCCCCTGTTGAATCAATACAGCCACGTGTTCCCCGCGCTAGCGGGGATAAACCGCAGGTCGGTTATCTCGAAGCTGCCCGCTCTGCGTGTTCCCCGCGCTAGCGGGGATAAACCGAGGGCTGGCTGACGCGCACCGAGCGCCGCAACGTGTTCCCCGCGCTAGCGGGGATAAACCGGGGCTATATCCACGCCAAAGGGCCGCGCGACAGTGTTCCCCGCGCTAGCGGGGATAAACCGCCAGGCACTAACTCGCAGTATCACTCCCTGCCGTGTTCCCCGCGCTAGCGGGGATAAACCGGTCATCGCCGGTGAGGTATTTTTTTGGCTTAGGTGTTCCCCGCGCTAGCGGGGATAAACCGGATAGCGCGGAAATTGCCGAGGTTATAGCTAAGTGTTCCCCGCGCTAGCGGGGATAAACCGCGTCCAATACGAGCCGAGTGCTCACGCCCTTAGTGTTCCCCGCGCTAGCGGGGATAAACCGTTGAGGAATTCTTCCCGCAACGCCTGTTTGTCGTGTTCCCCGCGCTAGCGGGGATAAACCGCCCTGCCCGGCGATTGGATTATTCGCGGTGTTGTGTTCCCCGCGCTAGCGGGGATAAACCGGGGGCTATTGAGGTTTGCCAGCACAACCTGTCGTGTTCCCCGCGCTAGCGGGGATAAACCGTTCCACGCGTCGTCGTCAAACCTCGATTTCGGGTGTTCCCCGCGCTAGCGGGGATAAACCGCAGAACCTGGCTGATGAGGAACTTTCAATCTGCGTGTTCCCCGCGCTAGCGGGGATAAACCGTGCGATCTAATCTCCTCTGGCGTGACTGTACGGTGTTCCCCGCGCTAGCGGGGATAAACCGTTGCCAGCCGAGGCCGTTACCGTTCGCCAGAACGTGTTCCCCGCGCTAGCGGGGATAAACCGCGCTGAATTCCGATATTCCGCCGTATTGCACGGTGTTCCCCGCGCTAGCGGGGATAAACCTTTACGCAATATTAACAGACCAGGGAGCAGCGCGTGTTCCCCGCGCTAGCGGGGATAAACCGGGGTTATCTCCCTGCCGTTAAAACGGACGTTTGTGTTCCCCGCGCTAGCGGGGATAAACCGCTCATTTGCCTTGCTTGATGACCACTGCGGTAGTGTTCCCCGCGCTAGCGGGGATAAACCGTCATCGAGTACGGAAAATCCGTTTTTATTGTAGTGTTCCCCGCGCCAGCGGGGATAAACCGCTACGAAGGCGTCTTTATGGCGCACAGTACCAGTGTTCCCCGCGCCAGCGGGGATAAACCGCCGTCCAGCTCCACATGCTCGCCAATCTCCTGGTGTTCCCCGCGCCAGCGGGGATAAACCGGTTGGCAGCATGATCGCTAAATCTAAAATGCCGTGTTCCCCGCGCCAGCGGGGATAAACCGTTAGCCATCCCCATACCAAAGTTAAAGTCGTAGTGTTCCCCGCGCCAGCGGGGATAAACCGCCTGGCAAATTATTTCCTGGATACTCGATATCGTGTTCCCCGCGCCAGCGGGGATAAACCGGCTGCGTTCAACAACGGGGAAATGCCGGAGAAGTGTTCCCCGCGCCAGCGGGGATAAACCGGGCAACTGGGCGATCATCTGGGCGCTGTTTATGTGTTCCCCGCGCCAGCGGGGATAAACCGCATTCGCTCAATAGCGGCCCGCGTGGCGGTGAGTGTTCCCCGCGCCAGCGGGGATAAACCGGGGATTATGTCCTCTAAAGACTGGCTAATCACGTGTTCCCCGCGCCAGCGGGGATAAGCCGTTGAATACGTCGCGATACCAGTCACTCCGGAAGTCTTCCCCGCGCTAGCGGGGATAAACCGAGGGGCGTTCCGCAGTCGGCAAGGGCTGAAAAATGTTCCCCGCGTCAGCGGGGATAAACAC

>NZ_CP012344|2|2|973034-973856|PILER-CR
GTGTTCCCCGCGCTAGCGGGGATAAACCG	GCGGACTCCTGCACCTCTTTGAGCCCGTCGAT
GTGTTCCCCGCGCTAGCGGGGATAAACCG	TCAGCGTAGGTTGTTGATGTTCCCACCAGCCC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	GCCACAATCAGATCGAAACGCTCCGGATCACC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	TTGTCACTGCCCCTGTTGAATCAATACAGCCAC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CAGGTCGGTTATCTCGAAGCTGCCCGCTCTGC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	AGGGCTGGCTGACGCGCACCGAGCGCCGCAAC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	GGGCTATATCCACGCCAAAGGGCCGCGCGACA
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CCAGGCACTAACTCGCAGTATCACTCCCTGCC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	GTCATCGCCGGTGAGGTATTTTTTTGGCTTAG
GTGTTCCCCGCGCTAGCGGGGATAAACCG	GATAGCGCGGAAATTGCCGAGGTTATAGCTAA
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CGTCCAATACGAGCCGAGTGCTCACGCCCTTA
GTGTTCCCCGCGCTAGCGGGGATAAACCG	TTGAGGAATTCTTCCCGCAACGCCTGTTTGTC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CCCTGCCCGGCGATTGGATTATTCGCGGTGTT
GTGTTCCCCGCGCTAGCGGGGATAAACCGGGGGCTATTGAGGTTTGCCAGCACAACCTGTCGTGTTCCCCGCGCTAGCGGGGATAAACCG	TTCCACGCGTCGTCGTCAAACCTCGATTTCGG
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CAGAACCTGGCTGATGAGGAACTTTCAATCTGC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	TGCGATCTAATCTCCTCTGGCGTGACTGTACG
GTGTTCCCCGCGCTAGCGGGGATAAACCG	TTGCCAGCCGAGGCCGTTACCGTTCGCCAGAAC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CGCTGAATTCCGATATTCCGCCGTATTGCACG
GTGTTCCCCGCGCTAGCGGGGATAAACCT	TTACGCAATATTAACAGACCAGGGAGCAGCGC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	GGGTTATCTCCCTGCCGTTAAAACGGACGTTT
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CTCATTTGCCTTGCTTGATGACCACTGCGGTA
GTGTTCCCCGCGCTAGCGGGGATAAACCG	TCATCGAGTACGGAAAATCCGTTTTTATTGTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTACGAAGGCGTCTTTATGGCGCACAGTACCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGTCCAGCTCCACATGCTCGCCAATCTCCTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTTGGCAGCATGATCGCTAAATCTAAAATGCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTAGCCATCCCCATACCAAAGTTAAAGTCGTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCTGGCAAATTATTTCCTGGATACTCGATATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCTGCGTTCAACAACGGGGAAATGCCGGAGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGCAACTGGGCGATCATCTGGGCGCTGTTTAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CATTCGCTCAATAGCGGCCCGCGTGGCGGTGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGATTATGTCCTCTAAAGACTGGCTAATCAC
GTGTTCCCCGCGCCAGCGGGGATAAGCCG	TTGAATACGTCGCGATACCAGTCACTCCGGAA


>NZ_CP012344|2|2|973034-975139|CRISPRCasFinder
GTGTTCCCCGCGCTAGCGGGGATAAACCG	GCGGACTCCTGCACCTCTTTGAGCCCGTCGAT
GTGTTCCCCGCGCTAGCGGGGATAAACCG	TCAGCGTAGGTTGTTGATGTTCCCACCAGCCC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	GCCACAATCAGATCGAAACGCTCCGGATCACC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	TTGTCACTGCCCCTGTTGAATCAATACAGCCAC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CAGGTCGGTTATCTCGAAGCTGCCCGCTCTGC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	AGGGCTGGCTGACGCGCACCGAGCGCCGCAAC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	GGGCTATATCCACGCCAAAGGGCCGCGCGACA
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CCAGGCACTAACTCGCAGTATCACTCCCTGCC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	GTCATCGCCGGTGAGGTATTTTTTTGGCTTAG
GTGTTCCCCGCGCTAGCGGGGATAAACCG	GATAGCGCGGAAATTGCCGAGGTTATAGCTAA
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CGTCCAATACGAGCCGAGTGCTCACGCCCTTA
GTGTTCCCCGCGCTAGCGGGGATAAACCG	TTGAGGAATTCTTCCCGCAACGCCTGTTTGTC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CCCTGCCCGGCGATTGGATTATTCGCGGTGTT
GTGTTCCCCGCGCTAGCGGGGATAAACCG	GGGGCTATTGAGGTTTGCCAGCACAACCTGTC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	TTCCACGCGTCGTCGTCAAACCTCGATTTCGG
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CAGAACCTGGCTGATGAGGAACTTTCAATCTGC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	TGCGATCTAATCTCCTCTGGCGTGACTGTACG
GTGTTCCCCGCGCTAGCGGGGATAAACCG	TTGCCAGCCGAGGCCGTTACCGTTCGCCAGAAC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CGCTGAATTCCGATATTCCGCCGTATTGCACG
GTGTTCCCCGCGCTAGCGGGGATAAACCT	TTACGCAATATTAACAGACCAGGGAGCAGCGC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	GGGTTATCTCCCTGCCGTTAAAACGGACGTTT
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CTCATTTGCCTTGCTTGATGACCACTGCGGTA
GTGTTCCCCGCGCTAGCGGGGATAAACCG	TCATCGAGTACGGAAAATCCGTTTTTATTGTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTACGAAGGCGTCTTTATGGCGCACAGTACCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGTCCAGCTCCACATGCTCGCCAATCTCCTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTTGGCAGCATGATCGCTAAATCTAAAATGCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTAGCCATCCCCATACCAAAGTTAAAGTCGTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCTGGCAAATTATTTCCTGGATACTCGATATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCTGCGTTCAACAACGGGGAAATGCCGGAGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGCAACTGGGCGATCATCTGGGCGCTGTTTAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CATTCGCTCAATAGCGGCCCGCGTGGCGGTGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGATTATGTCCTCTAAAGACTGGCTAATCAC
GTGTTCCCCGCGCCAGCGGGGATAAGCCG	TTGAATACGTCGCGATACCAGTCACTCCGGAA
GTCTTCCCCGCGCTAGCGGGGATAAACCG	AGGGGCGTTCCGCAGTCGGCAAGGGCTGAAAA
ATGTTCCCCGCGTCAGCGGGGATAAACAC

>NZ_CP012344|2|2|973034-975139|CRT
GTGTTCCCCGCGCTAGCGGGGATAAACCG	GCGGACTCCTGCACCTCTTTGAGCCCGTCGAT
GTGTTCCCCGCGCTAGCGGGGATAAACCG	TCAGCGTAGGTTGTTGATGTTCCCACCAGCCC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	GCCACAATCAGATCGAAACGCTCCGGATCACC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	TTGTCACTGCCCCTGTTGAATCAATACAGCCAC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CAGGTCGGTTATCTCGAAGCTGCCCGCTCTGC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	AGGGCTGGCTGACGCGCACCGAGCGCCGCAAC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	GGGCTATATCCACGCCAAAGGGCCGCGCGACA
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CCAGGCACTAACTCGCAGTATCACTCCCTGCC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	GTCATCGCCGGTGAGGTATTTTTTTGGCTTAG
GTGTTCCCCGCGCTAGCGGGGATAAACCG	GATAGCGCGGAAATTGCCGAGGTTATAGCTAA
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CGTCCAATACGAGCCGAGTGCTCACGCCCTTA
GTGTTCCCCGCGCTAGCGGGGATAAACCG	TTGAGGAATTCTTCCCGCAACGCCTGTTTGTC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CCCTGCCCGGCGATTGGATTATTCGCGGTGTT
GTGTTCCCCGCGCTAGCGGGGATAAACCG	GGGGCTATTGAGGTTTGCCAGCACAACCTGTC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	TTCCACGCGTCGTCGTCAAACCTCGATTTCGG
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CAGAACCTGGCTGATGAGGAACTTTCAATCTGC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	TGCGATCTAATCTCCTCTGGCGTGACTGTACG
GTGTTCCCCGCGCTAGCGGGGATAAACCG	TTGCCAGCCGAGGCCGTTACCGTTCGCCAGAAC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CGCTGAATTCCGATATTCCGCCGTATTGCACG
GTGTTCCCCGCGCTAGCGGGGATAAACCT	TTACGCAATATTAACAGACCAGGGAGCAGCGC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	GGGTTATCTCCCTGCCGTTAAAACGGACGTTT
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CTCATTTGCCTTGCTTGATGACCACTGCGGTA
GTGTTCCCCGCGCTAGCGGGGATAAACCG	TCATCGAGTACGGAAAATCCGTTTTTATTGTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTACGAAGGCGTCTTTATGGCGCACAGTACCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGTCCAGCTCCACATGCTCGCCAATCTCCTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTTGGCAGCATGATCGCTAAATCTAAAATGCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTAGCCATCCCCATACCAAAGTTAAAGTCGTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCTGGCAAATTATTTCCTGGATACTCGATATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCTGCGTTCAACAACGGGGAAATGCCGGAGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGCAACTGGGCGATCATCTGGGCGCTGTTTAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CATTCGCTCAATAGCGGCCCGCGTGGCGGTGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGATTATGTCCTCTAAAGACTGGCTAATCAC
GTGTTCCCCGCGCCAGCGGGGATAAGCCG	TTGAATACGTCGCGATACCAGTCACTCCGGAA
GTCTTCCCCGCGCTAGCGGGGATAAACCG	AGGGGCGTTCCGCAGTCGGCAAGGGCTGAAAA
ATGTTCCCCGCGTCAGCGGGGATAAACAC

>NZ_CP012344|2|3|973889-975078|PILER-CR
	GCGGACTCCTGCACCTCTTTGAGCCCGTCGAT
GTGTTCCCCGCGCTAGCGGGGATAAACCG	TCAGCGTAGGTTGTTGATGTTCCCACCAGCCC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	GCCACAATCAGATCGAAACGCTCCGGATCACC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	TTGTCACTGCCCCTGTTGAATCAATACAGCCAC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CAGGTCGGTTATCTCGAAGCTGCCCGCTCTGC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	AGGGCTGGCTGACGCGCACCGAGCGCCGCAAC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	GGGCTATATCCACGCCAAAGGGCCGCGCGACA
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CCAGGCACTAACTCGCAGTATCACTCCCTGCC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	GTCATCGCCGGTGAGGTATTTTTTTGGCTTAG
GTGTTCCCCGCGCTAGCGGGGATAAACCG	GATAGCGCGGAAATTGCCGAGGTTATAGCTAA
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CGTCCAATACGAGCCGAGTGCTCACGCCCTTA
GTGTTCCCCGCGCTAGCGGGGATAAACCG	TTGAGGAATTCTTCCCGCAACGCCTGTTTGTC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CCCTGCCCGGCGATTGGATTATTCGCGGTGTT
GTGTTCCCCGCGCTAGCGGGGATAAACCGGGGGCTATTGAGGTTTGCCAGCACAACCTGTCGTGTTCCCCGCGCTAGCGGGGATAAACCG	TTCCACGCGTCGTCGTCAAACCTCGATTTCGG
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CAGAACCTGGCTGATGAGGAACTTTCAATCTGC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	TGCGATCTAATCTCCTCTGGCGTGACTGTACG
GTGTTCCCCGCGCTAGCGGGGATAAACCG	TTGCCAGCCGAGGCCGTTACCGTTCGCCAGAAC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CGCTGAATTCCGATATTCCGCCGTATTGCACG
GTGTTCCCCGCGCTAGCGGGGATAAACCT	TTACGCAATATTAACAGACCAGGGAGCAGCGC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	GGGTTATCTCCCTGCCGTTAAAACGGACGTTT
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CTCATTTGCCTTGCTTGATGACCACTGCGGTA
GTGTTCCCCGCGCTAGCGGGGATAAACCG	TCATCGAGTACGGAAAATCCGTTTTTATTGTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTACGAAGGCGTCTTTATGGCGCACAGTACCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGTCCAGCTCCACATGCTCGCCAATCTCCTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTTGGCAGCATGATCGCTAAATCTAAAATGCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTAGCCATCCCCATACCAAAGTTAAAGTCGTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCTGGCAAATTATTTCCTGGATACTCGATATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCTGCGTTCAACAACGGGGAAATGCCGGAGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGCAACTGGGCGATCATCTGGGCGCTGTTTAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CATTCGCTCAATAGCGGCCCGCGTGGCGGTGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGATTATGTCCTCTAAAGACTGGCTAATCAC
GTGTTCCCCGCGCCAGCGGGGATAAGCCG	TTGAATACGTCGCGATACCAGTCACTCCGGAA
GTCTTCCCCGCGCTAGCGGGGATAAACCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012344.1\|WP_000741649.1\|980293_981004_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
NZ_CP012344.1\|WP_024148849.1\|971723_972644_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NZ_CP012344.1\|WP_023236955.1\|970348_971095_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187776
NZ_CP012344.1\|WP_000134246.1\|981479_982529_+\|tRNA-pseudouridine(13)-synthase-TruD	unknown	unknown	gnl\|CDD\|234884
NZ_CP012344.1\|WP_023201007.1\|972643_972937_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	cd09648_cas2_CAS-I-E	gnl\|CDD\|236930
NZ_CP012344.1\|WP_001092269.1\|977368_978808_+\|sulfate-adenylyltransferase	unknown	unknown	gnl\|CDD\|235349
NZ_CP012344.1\|WP_000372384.1\|976450_977359_+\|sulfate-adenylyltransferase-subunit-2	unknown	unknown	gnl\|CDD\|235375
NZ_CP012344.1\|WP_020839113.1\|968717_969266_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|187862
NZ_CP012344.1\|WP_001173663.1\|978794_979400_+\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|179661
NZ_CP012344.1\|WP_023236956.1\|971076_971727_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|273869
NZ_CP012344.1\|WP_001118109.1\|979417_979774_+\|DUF3561-domain-containing-protein	unknown	unknown	gnl\|CDD\|371891
NZ_CP012344.1\|WP_023236952.1\|962142_962877_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NZ_CP012344.1\|WP_000368586.1\|967161_968721_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
NZ_CP012344.1\|WP_023244651.1\|963089_964043_-\|SPI-1-type-III-secretion-system-effector-SopD	unknown	unknown	gnl\|CDD\|185277
NZ_CP012344.1\|WP_001219245.1\|981003_981483_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851
NZ_CP012344.1\|WP_023236954.1\|964486_967150_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_CP012344.1\|WP_001221538.1\|982509_983271_+\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732
NZ_CP012344.1\|WP_000490481.1\|975153_976200_-\|aminopeptidase	unknown	unknown	gnl\|CDD\|182299
NZ_CP012344.1\|WP_001591403.1\|969279_970338_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|273843
NZ_CP012344.1\|WP_000517480.1\|979963_980275_+\|cell-division-protein-FtsB	unknown	unknown	gnl\|CDD\|179156

Protein	Function_ID	Function_description	E-value
NZ_CP012344.1\|WP_000741649.1\|980293_981004_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	2.24126e-119
NZ_CP012344.1\|WP_024148849.1\|971723_972644_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	1.57497e-157
NZ_CP012344.1\|WP_023236955.1\|970348_971095_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	4.16804e-49
NZ_CP012344.1\|WP_000134246.1\|981479_982529_+\|tRNA-pseudouridine(13)-synthase-TruD	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
NZ_CP012344.1\|WP_023201007.1\|972643_972937_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	4.77025e-62
NZ_CP012344.1\|WP_001092269.1\|977368_978808_+\|sulfate-adenylyltransferase	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
NZ_CP012344.1\|WP_000372384.1\|976450_977359_+\|sulfate-adenylyltransferase-subunit-2	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
NZ_CP012344.1\|WP_020839113.1\|968717_969266_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	5.28868e-33
NZ_CP012344.1\|WP_001173663.1\|978794_979400_+\|adenylyl-sulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	4.61291e-146
NZ_CP012344.1\|WP_023236956.1\|971076_971727_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|273869	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1974 from Chlorobium tepidum, is found in the Ecoli subtype of CRISPR/Cas regions and is designated Cse3 (CRISPR/Cas Subtype Ecoli protein 3). The representative of this family from Thermus thermophilus HB8 (TTHB192) has been crystallized and found to have a structure consisting of two domains with opposing parallel beta-sheets known as a beta-sheet platform. This structure is similar to those found in the Sex-lethal protein and poly(A)-binding protein. This structure is consistent with an RNA-binding function.	4.74047e-75
NZ_CP012344.1\|WP_001118109.1\|979417_979774_+\|DUF3561-domain-containing-protein	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	4.85353e-49
NZ_CP012344.1\|WP_023236952.1\|962142_962877_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	7.28477e-139
NZ_CP012344.1\|WP_000368586.1\|967161_968721_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	5.17383e-173
NZ_CP012344.1\|WP_023244651.1\|963089_964043_-\|SPI-1-type-III-secretion-system-effector-SopD	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0
NZ_CP012344.1\|WP_001219245.1\|981003_981483_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	3.20925e-104
NZ_CP012344.1\|WP_023236954.1\|964486_967150_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	0
NZ_CP012344.1\|WP_001221538.1\|982509_983271_+\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	1.7078e-146
NZ_CP012344.1\|WP_000490481.1\|975153_976200_-\|aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
NZ_CP012344.1\|WP_001591403.1\|969279_970338_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	1.5515e-136
NZ_CP012344.1\|WP_000517480.1\|979963_980275_+\|cell-division-protein-FtsB	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	1.08865e-64

>NZ_CP012344.1|WP_023201007.1|972643_972937_+|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MSMVVVVTENVPPRLRGRLAVWLLEVRAGVYVGDTSKRIREMIWQQITQLGGVGNVVMAWATNTESGFEFQTWGENRRIPVDLDGLRLVSFLPVANQ
>NZ_CP012344.1|WP_024148849.1|971723_972644_+|type-I-E-CRISPR-associated-endonuclease-Cas1
MMFVPLNPIPLKDRTSMIFLQYGQIDVLDGAFVLIDKTGIRTHIPVGSVACIMLEPGTRVSHAAVRLASTVGTLLVWVGEAGVRVYSSGQPGGARADKLLYQAKLALDDDLRLKVVRKMYELRFREPPPARRSVEQLRGIEGSRVRATYALLAKQYGVKWHGRNYDPKDWEKGDVVNRCISAATSCLYGISEAAILAAGYAPAIGFIHSGKPLSFVYDIADIIKFESVVPKAFEIAARHPAEPDKEVRLACRDIFRSSKLTGKLIPLIEEVLAAGEIEPPQPAPDMLPPAIPEPESLGDSGHRGHG
>NZ_CP012344.1|WP_023236956.1|971076_971727_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSRITLHTSELSPAQLLHLVERGEYVMHQWLWDLFPGGKERQFLYRREELQGAFRFFVLSQEQPAASAIFDVQTRPFAPTLSAGQTLRFNLRANPTVCKNGKRHDLLMEAKRQRKTQGDSQDIWSYQQQAALTWLARQGEQNGFTLRETSVDAYRQQQIRRGKDRQMIQFSSVDYTGVLVLNDPVLFLRRLAQGYGKSRAFGCGMMMIKPGDDA
>NZ_CP012344.1|WP_023236955.1|970348_971095_+|type-I-E-CRISPR-associated-protein-Cas5/CasD
MSQYLVFQLHGPMASWGVDAPGEVRHSHDLPSRSALLGLLAAALGIRRDEEERLNAFNRHYQFLLCASGNPRWARDYHTVQMPKEVRKARYFSRREELQDPELLSALISRRDYYTDAWWMIAVSATPDAPYTLAQLQAALQHPVFPLYLGRKSHPLALPLAPQLLDGRAPDVLREAYRWYQDQFNTLKLTLPRLQNECWWEGEHDGLTANKILRRRDMPLSRQQWLFGERSVNQGPWLRKEDACISQE
>NZ_CP012344.1|WP_001591403.1|969279_970338_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTTFIQLHLLTAYPAANLNRDDTGAPKTVVLGGATRLRISSQSLKRAWRTSELFEQALAGNIGIRSGRIAREAAQILIESGIDAKKAVEYVKNIANYFGKVKAEKKPKDELTNAETGQLVHISPAEFEGVKALAHRLAEEKRAPKEEELALLRKDRMAVDIAMFGRMLAEKTDFNVEAACQVAHAFGVSETIVEDDFFTAVDDLRQASAEDAGAGHLGETGFGSALFYTYICINKDLLVKNLNDNEELANKTLRAFTEAALKVSPTGKQNSFASRAYASWALAEKGTDQPRSLAAAFYEPINGTDQLNVAVKRITSLHKNMNKVYGQRTDTASFDVMNQQGSMKDVLDFICA
>NZ_CP012344.1|WP_020839113.1|968717_969266_+|type-I-E-CRISPR-associated-protein-Cse2/CasB
MSIVQEDHKATLRKWHEDLQEKRGARASLRRSKTVNEACLSEGFHLLLMQTHSLWKNKADWHVTALAITAILAAHIKFIDERQSFATQLGQKKSGDNPVMSKLRFSRLSAVKNPDELLRHLRRAVQLLDGSVNLISLADDIFRWCQEQDDLLNHHRRQQRPTEFLRIRWALEYYQAGDNEQD
>NZ_CP012344.1|WP_000368586.1|967161_968721_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MDNFSLLTTPWLPVRFKDGSTGKLAPVNLADENVVDIAATRADLQGAAWQFLLGLLQCSIAPKRYKNWEDIWFDGLHADALHKALAPLEHAFQFGAETPSFMQDFEELPDNKITIASLLPETPGIQTTELNTDHFIKRGVMECFCPHCAALALFSMQLNAPSGGQGYRTGLRGGGPLTTLIELQEYQGERQTPLWRKLWLNVMPQDAADLPLPVVYDAAVFPWLAATRTSEPPAHTITTDEQVNKLQAYWGMPRRIRLDFATIRQGVCNICGNNSDELLIQMLVKNYGVNYDRWRHPLTPHRLQIKNSKGFEPVITQPGGLLWRDWLGLSQENPTEKNTEYPAQVIKVFNARELRNIKVGLWGFGADFKKMKIRCWYEHHFPLLMTEGLIPDLRKATQTATRLLSLLRSALKEAWFANAKGARGDFSFIDIDFWNLTQGRFLNLIHDLENGHKPDERLNKWQRELWLFTRCYFDDHVFTNPYESSDLERIMKARKKYFTSSAEKQSAKAAKAKKQEAAE
>NZ_CP012344.1|WP_023236954.1|964486_967150_+|CRISPR-associated-helicase/endonuclease-Cas3
MSIYHYWGKSRRGETNGGDDYHLLCWHSLDVAAVGYWMVINNIYFIDHYLKKLGIQDKEQAAQFFAWILCWHDIGKFAHSFQQLYRHEALNIFNEPTRHYEKIAHTTLGYVLWNSWLSECPELFPPSSLSVRKSKRVMALWMPVTTGHHGRPPEAIQELDHFRQQDKDAARDFLLRIKALFPLITLPEAWDEDEGIDQFQQLSWFISAAVVLADWTGSASRYFPRTAEKMPVDTYWQQALAKAQTAITLFPSAANVSAFTGIETLFPFIQHPTPLQQKALELDINVDGAQLFILEDVTGAGKTEAALILAHRLMAAGKAQGLYFGLPTMATANAMFERMANTWLALYQPDSRPSLILAHSARRLMDRFNQSIWSVTLSGTEEPDEAQPDSQGCAAWFADSNKKALLAEVGVGTLDQAMMAVMPFKHNNLRLLGLSNKILLADEIHACDAWMSRILEGLIERQASNGNATILLSATLSQQQRDKLVAAFSRGVRRSVQAPLLGHDDYPWLTQVTQTELISQRVDTRKEVERSVDIGWLHSEEACLERIGEAVEKGNCIAWIRNSVDDAIRIYRQLQLSKVVATENLLLFHSRFAFHDRQRIESQTLNLFGKQSGAQRAGKVIIATQVIEQSLDIDCDEMISDLAPVDLLIQRAGRLQRHIRDRNGLVKKSGQDERETPVLRILAPEWDDAPRENWLSSAMCNSAYVYPDHGRMWLTQRILREQGTIRMPQSARLLIESVYGEDVNMPVGFAKTEQLQEGKFYCDRAFAGQMLLNFAPGYCAEISDSLPEKMSTRLAEESVTLWLAKIVDSVVTPYASGEHAWEMSVLRVRQSWWNKHKDEFEKLDGEPLRKWCAQQHQDKDFATVIVVTDCAACGYSANEGLIGMMGE
>NZ_CP012344.1|WP_023244651.1|963089_964043_-|SPI-1-type-III-secretion-system-effector-SopD
MPVTLSFGNHQNYTLNESRLAHLLSADKEKAIHMGGWDKVQDHFRAEKKDHALEVLHSIIHGQGRGEPGEMEVNVEDINKIYAFKRLQHLACPAHQDLFTIKMDASQTQFLLMVGDTVISQSNIKDILNISDDAVIESMSREERQLFLQICEVIGAKMTWHPELLQESISTLRKEVTGNAQIKAAVYEMMRPAEAPDHPLVEWQDLLTADEKSMLACINAGNFEPTTQFCKIGYQEVQGEVAFSMMHPCISYLLHSYSPFAEFKPTNSGFLKKLNQDYNDYHAKKMFIDVILEKLYLTHERSLHIGKDGCSRNILLT
>NZ_CP012344.1|WP_023236952.1|962142_962877_+|phosphoadenosine-phosphosulfate-reductase
MSQLDLNALNELPKVDRVMALAETNAQLEKLSAEERVAWALENLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYQFIDEITDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNEINKVEPMNRALKELKAQTWFAGLRREQSGSRAHLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>NZ_CP012344.1|WP_000490481.1|975153_976200_-|aminopeptidase
MFSATRRFAVILALGVGFILPAQAASPGPGEIANTQARHIATFFPGRMTGSPAEMLSADYLRQQFTQMGYQSDIRTFNSRFIYTTKDNRKNWHNVTGSTVIAAHEGRVPQQIIIMAHLDTYAPQSDADVDANLGGLTLQGMDDNAAGLGVMLELAARLKDIPTHYGIRFIATSGEEEGKLGAENLLKRMSDAEKKNTLLVINLDNLIVGDKLYFNSGKNTPEAVRTLTRDRALAIARRYGIAANTNPGRNPSYPKGTGCCNDAEVFDKAGISVLSVEATNWNLGKKDGYQQRVKNASFPNGNSWHDVRLDNQQHIDKALPGRIERRSRDVVRIMLPLVKELAKAEKTS
>NZ_CP012344.1|WP_000372384.1|976450_977359_+|sulfate-adenylyltransferase-subunit-2
MDQKRLTHLRQLEAESIHIIREVAAEFANPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYAFRDRTANAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWRNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMVDDDRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESHAQTLPEIIEEMLVSTTSERQGRMIDRDQAGSMELKKRQGYF
>NZ_CP012344.1|WP_001092269.1|977368_978808_+|sulfate-adenylyltransferase
MNTILAQQIANEGGVEAWMMAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTLQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYREETFARIREDYLTFAEQLPGDLDIRFVPLSALEGDNVAAQSANMRWYSGPTLLEVLETVDIQRAVDRQPMRFPVQYVNRPNLDFRGYAGTLASGSVKVGERIKVLPSGVESSVARIVTFDGDKEEACAGEAITLVLNDDIDISRGDLLLAANETLAPARHAAIDVVWMAEQPLAPGQSYDVKLAGKKTRARIEAIRYQIDINNLTQRDVESLPLNGIGLVEMTFDEPLALDIYQQNPVTGGLIFIDRLSNVTVGAGMVRELDERGATPPVEYSAFELELNALVRRHFPHWDARDLLGDKHGAA
>NZ_CP012344.1|WP_001173663.1|978794_979400_+|adenylyl-sulfate-kinase
MALHDENVVWHSHPVTVAAREQLHGHRGVVLWFTGLSGSGKSTVAGALEEALHQRGVSTYLLDGDNVRHGLCRDLGFSDADRQENIRRVGEVASLMADAGLIVLTAFISPHRAERQLVKERVGHDRFIEIYVNTPLAICEQRDPKGLYKKARAGELRNFTGIDAIYEAPDSPQVHLNGEQLVTNLVSQLLDLLRRRDIIRS
>NZ_CP012344.1|WP_001118109.1|979417_979774_+|DUF3561-domain-containing-protein
MPGMVKVTGFNMRNSHNITFTRSDAFMVDDDATSAFPGAVVGFVSWLLALGIPFLLYGPNTLFFFLYTWPFFLALMPVSVIIGIALHLLVKGKILFSIMFTLLAVGALFGALFIWLLG
>NZ_CP012344.1|WP_000517480.1|979963_980275_+|cell-division-protein-FtsB
MGKLTLLLLALLVWLQYSLWFGKNGIHDYSRVNDDVVAQQATNAKLKARNDQLFAEIDDLNGGQEAIEERARNELSMTKPGETFYRLVPDASKRAATAGQTHR
>NZ_CP012344.1|WP_000741649.1|980293_981004_+|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MAATLLDVCAVVPAAGFGRRMQTECPKQYLSIGNKTILEHSVHALLAHPRVTRVVIAISPGDHRFAQLPLANHPQITVVDGGNERADSVLAGLQAVAKAQWVLVHDAARPCLHQDDLARLLAISENSRVGGILASPVRDTMKRGEPGKNAIAHTVERADLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPALVEGRADNIKVTRPEDLALAEFYLTRTIHQEKA
>NZ_CP012344.1|WP_001219245.1|981003_981483_+|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDEVNVKATTTEKLGFTGRGEGIACEAVALLMKAAK
>NZ_CP012344.1|WP_000134246.1|981479_982529_+|tRNA-pseudouridine(13)-synthase-TruD
MTEFDNLTWLHGKPQGSGLLKANPEDFVVVEDLGFTPDGEGEHILLRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDFSAFQLEGCKVLEYARHKRKLRLGALKGNAFTLVLREISDRRDVETRLQAIRDGGVPNYFGAQRFGIGGSNLQGALRWAQSNAPVRDRNKRSFWLSAARSALFNQIVHQRLKKPDFNQVVDGDALQLAGRGSWFVATSEELPELQRRVDEKELMITASLPGSGEWGTQRAALAFEQDAIAQETVLQSLLLREKVEASRRAMLLYPQQLSWNWWDDVTVELRFWLPAGSFATSVVRELINTMGDYAHIAE
>NZ_CP012344.1|WP_001221538.1|982509_983271_+|5'/3'-nucleotidase-SurE
MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFDNGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLNGYQHYDTAAAVTCALLRGLSREPLRTGRILNVNVPDLPLAQVKGIRVTRCGSRHPADKVIPQEDPRGNTLYWIGPPGDKYDAGPDTDFAAVDEGYVSVTPLHVDLTAHSAHDVVSDWLDSVGVGTQW

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP012344_1	1.14\|956472\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	956472-956503	32	CP053320	Salmonella enterica subsp. arizonae serovar 41:z4,z23:- strain 2016K-0011 plasmid unnamed, complete sequence	33141-33172	0	1.0
NZ_CP012344_1	1.16\|956594\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	956594-956625	32	NC_031077	Enterobacter phage Tyrion, complete genome	40360-40391	2	0.938
NZ_CP012344_1	1.16\|956594\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	956594-956625	32	NZ_CP044185	Salmonella enterica subsp. enterica strain AR-0403 plasmid pAR-0403	37330-37361	3	0.906
NZ_CP012344_1	1.16\|956594\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	956594-956625	32	NZ_CP045829	Escherichia coli strain AUSMDU00014361 plasmid pAUSMDU00014361_02, complete sequence	72944-72975	5	0.844
NZ_CP012344_1	1.16\|956594\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	956594-956625	32	NZ_CP028198	Salmonella enterica subsp. enterica serovar Concord strain CFSAN018747 plasmid pGMI14-002_2, complete sequence	18575-18606	5	0.844
NZ_CP012344_1	1.16\|956594\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	956594-956625	32	CP054337	Escherichia coli strain SCU-120 plasmid pSCU-120-2, complete sequence	51449-51480	5	0.844
NZ_CP012344_1	1.16\|956594\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	956594-956625	32	NZ_CP021729	Escherichia coli strain Combat11I9 plasmid pCombat11I9-3, complete sequence	52575-52606	5	0.844
NZ_CP012344_1	1.16\|956594\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	956594-956625	32	NZ_CP015997	Escherichia coli strain S51 plasmid pS51_2, complete sequence	41292-41323	5	0.844
NZ_CP012344_1	1.16\|956594\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	956594-956625	32	CP042641	Escherichia coli strain NCYU-24-74 plasmid pNCYU-24-74-3, complete sequence	33901-33932	5	0.844
NZ_CP012344_1	1.16\|956594\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	956594-956625	32	NZ_CP009051	Escherichia coli NCCP15648 plasmid p15648-1, complete sequence	85536-85567	5	0.844
NZ_CP012344_1	1.16\|956594\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	956594-956625	32	NZ_CP030183	Salmonella enterica strain SA20030575 plasmid pSA20030575.2, complete sequence	70179-70210	5	0.844
NZ_CP012344_1	1.16\|956594\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	956594-956625	32	LT906557	Escherichia coli isolate E. coli RL465 genome assembly, plasmid: II	65524-65555	5	0.844
NZ_CP012344_1	1.16\|956594\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	956594-956625	32	NZ_CP013030	Escherichia coli strain 2012C-4227 plasmid unnamed2, complete sequence	57502-57533	5	0.844
NZ_CP012344_1	1.16\|956594\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	956594-956625	32	NZ_CP040069	Escherichia coli strain A1_181 plasmid p_unnamed2, complete sequence	69825-69856	5	0.844
NZ_CP012344_1	1.16\|956594\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	956594-956625	32	NZ_CP015837	Escherichia coli strain MS6198 plasmid pMS6198C, complete sequence	52699-52730	5	0.844
NZ_CP012344_1	1.16\|956594\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	956594-956625	32	KY709687	Salmonella phage 29485, complete genome	19322-19353	5	0.844
NZ_CP012344_1	1.16\|956594\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	956594-956625	32	NC_050152	Enterobacteria phage P7, complete genome	90306-90337	5	0.844
NZ_CP012344_1	1.16\|956594\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	956594-956625	32	JQ806764	Salmonella phage vB_SosS_Oslo, complete genome	28137-28168	5	0.844
NZ_CP012344_1	1.16\|956594\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	956594-956625	32	KF030445	Escherichia phage 1720a-02, complete genome	44527-44558	5	0.844
NZ_CP012344_1	1.16\|956594\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	956594-956625	32	NC_049942	Escherichia phage JLK-2012, complete sequence	3200-3231	5	0.844
NZ_CP012344_2	2.6\|973369\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	973369-973400	32	NC_015314	Pseudonocardia dioxanivorans CB1190 plasmid pPSED01, complete sequence	125600-125631	5	0.844
NZ_CP012344_2	2.12\|973735\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	973735-973766	32	BK000583	TPA_inf: Enterobacteria phage P22 wild type, complete genome	25456-25487	5	0.844
NZ_CP012344_2	2.12\|973735\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	973735-973766	32	MN161573	UNVERIFIED: Salmonella virus P22 isolate HT105/1 int-201, complete genome	25456-25487	5	0.844
NZ_CP012344_2	2.12\|973735\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	973735-973766	32	AB426868	Enterobacteria phage P22 DNA, complete genome, strain: ATCC 19585-B1	25393-25424	5	0.844
NZ_CP012344_2	2.12\|973735\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	973735-973766	32	KR296686	Salmonella phage 22, complete genome	22193-22224	5	0.844
NZ_CP012344_2	2.12\|973735\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	973735-973766	32	L06296	Bacteriophage P22 eaA - eaI genes, complete cds	4145-4176	5	0.844
NZ_CP012344_2	2.12\|973735\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	973735-973766	32	NC_002371	Enterobacteria phage P22 virus, complete genome	25456-25487	5	0.844
NZ_CP012344_2	2.12\|973735\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	973735-973766	32	KR296688	Salmonella phage 34, complete genome	32382-32413	5	0.844
NZ_CP012344_2	2.12\|973735\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	973735-973766	32	AF217253	Bacteriophage P22 complete genome	7207-7238	5	0.844
NZ_CP012344_2	2.12\|973735\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	973735-973766	32	KR296687	Salmonella phage 25, complete genome	32389-32420	5	0.844
NZ_CP012344_2	2.12\|973735\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	973735-973766	32	AB362338	Enterobacteria phage P22 DNA, complete sequence, strain: MSU	25393-25424	5	0.844
NZ_CP012344_2	2.12\|973735\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	973735-973766	32	AF527608	Bacteriophage P22-pbi, complete sequence	25456-25487	5	0.844
NZ_CP012344_2	2.12\|973735\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	973735-973766	32	EU570103	Salmonella phage epsilon34, complete genome	25155-25186	5	0.844
NZ_CP012344_2	2.12\|973735\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	973735-973766	32	NC_047875	Salmonella phage UPF_BP1, complete genome	36116-36147	5	0.844
NZ_CP012344_2	2.6\|973369\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	973369-973400	32	NZ_CP012940	Ralstonia solanacearum strain UW163 plasmid unnamed, complete sequence	1066715-1066746	6	0.812
NZ_CP012344_2	2.6\|973369\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	973369-973400	32	NZ_CP012944	Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence	776191-776222	6	0.812
NZ_CP012344_2	2.6\|973369\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	973369-973400	32	NC_017575	Ralstonia solanacearum Po82 megaplasmid, complete sequence	1570174-1570205	6	0.812
NZ_CP012344_2	2.6\|973369\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	973369-973400	32	NZ_CP051295	Ralstonia solanacearum strain CIAT_078 plasmid megaplasmid, complete sequence	1057729-1057760	6	0.812
NZ_CP012344_2	2.25\|974530\|32\|NZ_CP012344\|CRISPRCasFinder,CRT,PILER-CR	974530-974561	32	NZ_CP025513	Neorhizobium sp. SOG26 plasmid unnamed2, complete sequence	888591-888622	6	0.812
NZ_CP012344_2	2.30\|974835\|32\|NZ_CP012344\|CRISPRCasFinder,CRT,PILER-CR	974835-974866	32	NZ_CP022991	Paraburkholderia aromaticivorans strain BN5 plasmid pBN1, complete sequence	27531-27562	6	0.812
NZ_CP012344_1	1.4\|955862\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955862-955893	32	MN693553	Marine virus AFVG_25M446, complete genome	16528-16559	7	0.781
NZ_CP012344_1	1.4\|955862\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955862-955893	32	MN693421	Marine virus AFVG_25M197, complete genome	21716-21747	7	0.781
NZ_CP012344_1	1.4\|955862\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955862-955893	32	MN693283	Marine virus AFVG_25M198, complete genome	21762-21793	7	0.781
NZ_CP012344_1	1.4\|955862\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955862-955893	32	MN693381	Marine virus AFVG_25M224, complete genome	21873-21904	7	0.781
NZ_CP012344_1	1.4\|955862\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955862-955893	32	MN693277	Marine virus AFVG_25M240, complete genome	21699-21730	7	0.781
NZ_CP012344_2	2.6\|973369\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	973369-973400	32	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	1314647-1314678	7	0.781
NZ_CP012344_2	2.6\|973369\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	973369-973400	32	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	1930045-1930076	7	0.781
NZ_CP012344_2	2.6\|973369\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	973369-973400	32	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	3956680-3956711	7	0.781
NZ_CP012344_2	2.6\|973369\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	973369-973400	32	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	4971380-4971411	7	0.781
NZ_CP012344_2	2.27\|974652\|32\|NZ_CP012344\|CRISPRCasFinder,CRT,PILER-CR	974652-974683	32	KR093648	Moraxella phage Mcat24, complete genome	11348-11379	7	0.781
NZ_CP012344_2	2.27\|974652\|32\|NZ_CP012344\|CRISPRCasFinder,CRT,PILER-CR	974652-974683	32	KR093648	Moraxella phage Mcat24, complete genome	11914-11945	7	0.781
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	NZ_CP048420	Sphingomonas insulae strain KCTC 12872 plasmid unnamed2, complete sequence	2179-2210	8	0.75
NZ_CP012344_1	1.3\|955801\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955801-955832	32	NC_013940	Deferribacter desulfuricans SSM1 megaplasmid pDF308, complete sequence	77452-77483	8	0.75
NZ_CP012344_1	1.3\|955801\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955801-955832	32	NZ_CP047810	Staphylococcus aureus strain UP_1591 plasmid unnamed, complete sequence	17381-17412	8	0.75
NZ_CP012344_1	1.3\|955801\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955801-955832	32	MN693375	Marine virus AFVG_25M113, complete genome	12767-12798	8	0.75
NZ_CP012344_1	1.3\|955801\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955801-955832	32	MN693061	Marine virus AFVG_25M430, complete genome	13960-13991	8	0.75
NZ_CP012344_1	1.4\|955862\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955862-955893	32	NZ_CP009691	Bacillus mycoides strain ATCC 6462 plasmid pBMX_1, complete sequence	191169-191200	8	0.75
NZ_CP012344_1	1.4\|955862\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955862-955893	32	CP037991	Bacillus mycoides strain TH26 plasmid unnamed1, complete sequence	182265-182296	8	0.75
NZ_CP012344_1	1.4\|955862\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955862-955893	32	NZ_CP013139	Pseudoalteromonas sp. Bsw20308 plasmid pPBSW1, complete sequence	108657-108688	8	0.75
NZ_CP012344_1	1.18\|956716\|32\|NZ_CP012344\|CRISPRCasFinder,CRT	956716-956747	32	NC_014310	Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence	1655546-1655577	8	0.75
NZ_CP012344_1	1.18\|956716\|32\|NZ_CP012344\|CRISPRCasFinder,CRT	956716-956747	32	NZ_CP022760	Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence	1565948-1565979	8	0.75
NZ_CP012344_1	1.18\|956716\|32\|NZ_CP012344\|CRISPRCasFinder,CRT	956716-956747	32	NZ_CP022789	Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence	1565949-1565980	8	0.75
NZ_CP012344_2	2.6\|973369\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	973369-973400	32	NZ_AP021845	Azospira sp. I09 plasmid pAZI09, complete sequence	120316-120347	8	0.75
NZ_CP012344_2	2.6\|973369\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	973369-973400	32	NC_003324	Sinorhizobium phage PBC5, complete genome	38050-38081	8	0.75
NZ_CP012344_2	2.6\|973369\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	973369-973400	32	AF448724	Sinorhizobium meliloti phage PBC5, complete genome	38050-38081	8	0.75
NZ_CP012344_2	2.7\|973430\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	973430-973461	32	NC_015851	Acidithiobacillus caldus SM-1 megaplasmid, complete sequence	193268-193299	8	0.75
NZ_CP012344_2	2.25\|974530\|32\|NZ_CP012344\|CRISPRCasFinder,CRT,PILER-CR	974530-974561	32	MT006236	Bifidobacterium phage BitterVaud1, complete genome	2648-2679	8	0.75
NZ_CP012344_2	2.29\|974774\|32\|NZ_CP012344\|CRISPRCasFinder,CRT,PILER-CR	974774-974805	32	MN033396	Leviviridae sp. isolate H1_Bulk_Litter_5_scaffold_5325 sequence	302-333	8	0.75
NZ_CP012344_2	2.29\|974774\|32\|NZ_CP012344\|CRISPRCasFinder,CRT,PILER-CR	974774-974805	32	MN035738	Leviviridae sp. isolate H3_Bulk_Litter_16_11121 sequence	360-391	8	0.75
NZ_CP012344_1	1.3\|955801\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955801-955832	32	NC_014633	Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequence	654722-654753	9	0.719
NZ_CP012344_1	1.3\|955801\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955801-955832	32	CP002964	Emticicia oligotrophica DSM 17448 plasmid pEMTOL03, complete sequence	20033-20064	9	0.719
NZ_CP012344_1	1.3\|955801\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955801-955832	32	LR588166	Pseudomonas phage vB_PaeM_MIJ3	168898-168929	9	0.719
NZ_CP012344_1	1.3\|955801\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955801-955832	32	MH121069	Pseudomonas phage vB_PaeM_PA5oct, complete genome	285422-285453	9	0.719
NZ_CP012344_1	1.7\|956045\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	956045-956076	32	NC_019401	Cronobacter phage vB_CsaM_GAP32, complete genome	69164-69195	9	0.719
NZ_CP012344_1	1.18\|956716\|32\|NZ_CP012344\|CRISPRCasFinder,CRT	956716-956747	32	NZ_CP022775	Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence	1578348-1578379	9	0.719
NZ_CP012344_1	1.18\|956716\|32\|NZ_CP012344\|CRISPRCasFinder,CRT	956716-956747	32	NZ_CP022762	Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence	1496565-1496596	9	0.719
NZ_CP012344_1	1.18\|956716\|32\|NZ_CP012344\|CRISPRCasFinder,CRT	956716-956747	32	NZ_CP023017	Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence	1568471-1568502	9	0.719
NZ_CP012344_1	1.18\|956716\|32\|NZ_CP012344\|CRISPRCasFinder,CRT	956716-956747	32	NZ_CP014703	Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence	1495587-1495618	9	0.719
NZ_CP012344_1	1.18\|956716\|32\|NZ_CP012344\|CRISPRCasFinder,CRT	956716-956747	32	NZ_CP022771	Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence	1496557-1496588	9	0.719
NZ_CP012344_1	1.18\|956716\|32\|NZ_CP012344\|CRISPRCasFinder,CRT	956716-956747	32	NZ_CP022777	Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence	1495910-1495941	9	0.719
NZ_CP012344_1	1.18\|956716\|32\|NZ_CP012344\|CRISPRCasFinder,CRT	956716-956747	32	NZ_CP022799	Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence	1496547-1496578	9	0.719
NZ_CP012344_1	1.18\|956716\|32\|NZ_CP012344\|CRISPRCasFinder,CRT	956716-956747	32	NZ_CP022764	Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence	1578515-1578546	9	0.719
NZ_CP012344_1	1.18\|956716\|32\|NZ_CP012344\|CRISPRCasFinder,CRT	956716-956747	32	NZ_CP022797	Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence	1578498-1578529	9	0.719
NZ_CP012344_1	1.18\|956716\|32\|NZ_CP012344\|CRISPRCasFinder,CRT	956716-956747	32	NZ_CP022758	Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence	1578478-1578509	9	0.719
NZ_CP012344_2	2.1\|973063\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	973063-973094	32	NZ_CP034186	Deinococcus sp. S14-83 strain S14-83T plasmid unnamed2, complete sequence	224954-224985	9	0.719
NZ_CP012344_2	2.1\|973063\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	973063-973094	32	NZ_CP038257	Microbacterium sediminis strain YLB-01 plasmid unnamed, complete sequence	33613-33644	9	0.719
NZ_CP012344_2	2.6\|973369\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	973369-973400	32	NC_012586	Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence	2400011-2400042	9	0.719
NZ_CP012344_2	2.6\|973369\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	973369-973400	32	MF344569	Pseudomonas aeruginosa plasmid p12939-PER, complete sequence	199202-199233	9	0.719
NZ_CP012344_2	2.6\|973369\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	973369-973400	32	NZ_CP010016	Burkholderia thailandensis 34 plasmid unnamed, complete sequence	141092-141123	9	0.719
NZ_CP012344_2	2.25\|974530\|32\|NZ_CP012344\|CRISPRCasFinder,CRT,PILER-CR	974530-974561	32	NZ_CP054613	Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence	224015-224046	9	0.719
NZ_CP012344_2	2.30\|974835\|32\|NZ_CP012344\|CRISPRCasFinder,CRT,PILER-CR	974835-974866	32	NC_011887	Methylobacterium nodulans ORS 2060 plasmid pMNOD02, complete sequence	59907-59938	9	0.719
NZ_CP012344_2	2.33\|975018\|32\|NZ_CP012344\|CRISPRCasFinder,CRT,PILER-CR	975018-975049	32	NZ_CP050096	Rhizobium leguminosarum bv. trifolii strain 22B plasmid pRL22b3, complete sequence	151458-151489	9	0.719
NZ_CP012344_2	2.33\|975018\|32\|NZ_CP012344\|CRISPRCasFinder,CRT,PILER-CR	975018-975049	32	NZ_CP050102	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b2, complete sequence	132694-132725	9	0.719
NZ_CP012344_2	2.33\|975018\|32\|NZ_CP012344\|CRISPRCasFinder,CRT,PILER-CR	975018-975049	32	NZ_CP050107	Rhizobium leguminosarum bv. trifolii strain 4B plasmid pRL4b1, complete sequence	169943-169974	9	0.719
NZ_CP012344_2	2.33\|975018\|32\|NZ_CP012344\|CRISPRCasFinder,CRT,PILER-CR	975018-975049	32	NZ_CP050112	Rhizobium leguminosarum bv. trifolii strain 3B plasmid pRL3b5, complete sequence	169942-169973	9	0.719
NZ_CP012344_2	2.33\|975018\|32\|NZ_CP012344\|CRISPRCasFinder,CRT,PILER-CR	975018-975049	32	NZ_CP048285	Rhizobium leguminosarum bv. viciae 248 plasmid pRle248a, complete sequence	30547-30578	9	0.719
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	NZ_KX710093	Leclercia adecarboxylata strain pP10164 plasmid pP10164-2, complete sequence	145499-145530	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	NZ_CP016764	Citrobacter freundii strain B38 plasmid pOZ181, complete sequence	221669-221700	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	NZ_KX810825	Salmonella enterica subsp. enterica serovar Typhimurium strain MU1 plasmid pIMP4-SEM1, complete sequence	208034-208065	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	NZ_LN830952	Enterobacter sp. 247 strain 247 BMC plasmid pEB247, complete sequence	119400-119431	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	NZ_KP975077	Enterobacter cloacae strain MRSN17626 plasmid pMRVIM0813, complete sequence	80821-80852	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	NZ_KM107842	Escherichia coli strain G3/10 plasmid pSYM6, complete sequence	3257-3288	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	NZ_CP028197	Salmonella enterica subsp. enterica serovar Concord strain CFSAN018747 plasmid pGMI14-002_1, complete sequence	5883-5914	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	NZ_CP028197	Salmonella enterica subsp. enterica serovar Concord strain CFSAN018747 plasmid pGMI14-002_1, complete sequence	287177-287208	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	NZ_CP011601	Phytobacter ursingii strain CAV1151 plasmid pCAV1151-296, complete sequence	225193-225224	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	CP019195	Salmonella enterica subsp. enterica serovar Senftenberg str. ATCC 43845 plasmid pATCC43845, complete sequence	330853-330884	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	NZ_CP028975	Cronobacter sakazakii strain GZcsf-1 plasmid pGW1, complete sequence	61389-61420	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	NZ_CP048350	Raoultella ornithinolytica strain 23 plasmid p23_A-OXA140, complete sequence	120453-120484	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	NC_025058	Escherichia coli strain TB22 plasmid pEC22, complete sequence	3228-3259	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	NZ_CP010179	Escherichia coli strain H15 plasmid A, complete genome	93295-93326	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	NZ_CP029729	Citrobacter sp. CRE-46 strain AR_0157 plasmid unnamed1, complete sequence	8816-8847	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	NZ_CP042506	Leclercia adecarboxylata strain E1 plasmid pE1_001, complete sequence	113595-113626	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	NZ_CP039717	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS000211 plasmid p10-3184.1, complete sequence	30127-30158	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	MT077884	Escherichia coli plasmid p33, complete sequence	119296-119327	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	MT077886	Escherichia coli plasmid p39, complete sequence	118519-118550	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	NZ_CP037875	Salmonella enterica subsp. enterica serovar 4,[5],12:i:- strain PNCS015054 plasmid pPNCS015054_S2, complete sequence	70565-70596	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	MN423361	Leclercia sp. strain 1106151 plasmid p1106151-mcr, complete sequence	120808-120839	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	NZ_CP044204	Salmonella enterica subsp. enterica serovar Senftenberg strain AR-0405 plasmid pAR-0405, complete sequence	55420-55451	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	NZ_CP020529	Enterobacter cloacae strain 174 plasmid unnamed1, complete sequence	19282-19313	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	LC556211	Enterobacter cloacae CC32 plasmid pCC32 DNA, complete sequence	3014-3045	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	NZ_CP031567	Enterobacter hormaechei strain 2013_1a plasmid pIncHI2-1301491, complete sequence	1306-1337	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	NZ_CP039559	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014846 plasmid p08-4425.1, complete sequence	29851-29882	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	NZ_CP030080	Enterobacter hormaechei strain 20710 plasmid pIMP-20710, complete sequence	135359-135390	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	NZ_CP008825	UNVERIFIED_ORG: Enterobacter cloacae ECNIH2 plasmid pKPC-272, complete sequence	132793-132824	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	NZ_CP024878	Klebsiella pneumoniae strain NH25 plasmid pNH25.4, complete sequence	13724-13755	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	NZ_CP022696	Citrobacter farmeri strain AUSMDU00008141 plasmid pAUSMDU8141-1, complete sequence	221761-221792	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	NZ_CP052871	Enterobacter cloacae strain 3849 plasmid p3846_IncHI2_mcr, complete sequence	260153-260184	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	CP049311	Salmonella enterica subsp. enterica serovar Heidelberg strain CVM N53023 plasmid pN53023, complete sequence	33346-33377	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	NZ_LT991958	Enterobacter cloacae complex sp. isolate C45 plasmid pC45-VIM4	144405-144436	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	NZ_CP029037	Salmonella enterica subsp. enterica serovar Senftenberg str. 361154004 plasmid unnamed, complete sequence	135859-135890	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	NZ_CP043855	Enterobacter hormaechei strain EB_P6_L3_02.19 plasmid unnamed2, complete sequence	239138-239169	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	NZ_CP044215	Klebsiella aerogenes strain KA_P10_L5_03.19 plasmid pIMPIncH12_334kb, complete sequence	152003-152034	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	NZ_CP026206	Escherichia coli strain ECONIH5 plasmid pECO-cbb3, complete sequence	151467-151498	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	CP049309	Salmonella enterica subsp. enterica serovar Johannesburg strain CVM N58011 plasmid p58011, complete sequence	253247-253278	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	NZ_CP024813	Enterobacter sp. CRENT-193 plasmid pCRENT-193_1, complete sequence	140982-141013	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	NZ_CP030186	Salmonella enterica strain SA20094620 plasmid pSA20094620.1, complete sequence	166961-166992	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	NZ_CP042494	Leclercia adecarboxylata strain E61 plasmid pE61_001, complete sequence	113595-113626	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	NZ_CP040696	Citrobacter freundii strain R47 plasmid pR47-309, complete sequence	73568-73599	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	NZ_CP026404	Escherichia coli strain ECONIH4 plasmid pECO-6357, complete sequence	26204-26235	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	NZ_CP030920	Escherichia coli strain KL53 plasmid pKL53-L, complete sequence	65878-65909	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	NZ_CP042552	Enterobacter hormaechei strain C45 plasmid pC45_001, complete sequence	118519-118550	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	NZ_CP039271	Salmonella enterica subsp. enterica serovar Senftenberg str. CFSAN004025 plasmid pCFSAN004025.1, complete sequence	115325-115356	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	NZ_CP016526	Salmonella enterica subsp. enterica serovar Heidelberg strain 09-036813-1A plasmid p09-036813-1A_261, complete sequence	49559-49590	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	NZ_CP031575	Enterobacter hormaechei strain A1 plasmid pIncHI2-1502264, complete sequence	212682-212713	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	CP050163	Escherichia coli plasmid Carbapenemase(KPC-2)_IncHI2, complete sequence	117181-117212	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	NZ_CP041734	Enterobacter hormaechei subsp. steigerwaltii strain ME-1 plasmid pME-1a, complete sequence	125735-125766	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	NZ_CP023570	Enterobacter hormaechei strain BW plasmid unnamed2, complete sequence	129459-129490	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	LC532224	Enterobacter hormaechei subsp. xiangfangensis A2483 plasmid pA2483mcr-9 DNA, complete sequence	58628-58659	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	LC532226	Enterobacter hormaechei subsp. xiangfangensis A2504 plasmid pA2504mcr-9 DNA, complete sequence	58628-58659	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	NZ_CP018460	Klebsiella pneumoniae strain Kp_Goe_39795 plasmid pKp_Goe_795-1, complete sequence	229704-229735	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	LN794248	Salmonella enterica subsp. enterica serovar Typhimurium plasmid incHI2, complete sequence	246166-246197	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	NZ_CP029248	Enterobacter hormaechei subsp. xiangfangensis strain OSUVMCKPC4-2 plasmid pOSUEC_D, complete sequence	144823-144854	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	NZ_CP031102	Leclercia sp. W17 plasmid pW17-1, complete sequence	201078-201109	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	LC542971	Escherichia coli IOMTU413 plasmid pIOMTU413 DNA, complete sequence	119010-119041	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	LC542972	Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence	124127-124158	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	NZ_CP053283	Escherichia coli strain SCU-308 plasmid pSCU-308-2, complete sequence	2800-2831	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	NC_024983	Salmonella enterica subsp. enterica serovar Typhimurium plasmid pSTm-A54650, strain A54560, complete sequence	149374-149405	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	NZ_CP044968	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS007098 plasmid pPNCS014881.1, complete sequence	37469-37500	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	NZ_CP044958	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS007087 plasmid pPNCS007087.1, complete sequence	217269-217300	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	NZ_CP043767	Enterobacter hormaechei strain EB_P9_L5_03.19 plasmid pIMPIncH12_331kb, complete sequence	174441-174472	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	NZ_CP013215	Klebsiella pneumoniae subsp. pneumoniae strain H11 plasmid pH11, complete sequence	230037-230068	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	NZ_CP027144	Enterobacter hormaechei subsp. hoffmannii strain AR_0365 plasmid unnamed1, complete sequence	53047-53078	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	NZ_CP021463	Salmonella enterica subsp. enterica serovar Typhimurium strain UGA14 plasmid pUGA14_1, complete sequence	302270-302301	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	NC_012556	Enterobacter cloacae plasmid pEC-IMPQ, complete sequence	131979-132010	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	NC_012555	Enterobacter cloacae plasmid pEC-IMP, complete sequence	131979-132010	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	NZ_CP042579	Enterobacter kobei strain C16 plasmid pC16_001, complete sequence	120835-120866	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	NZ_LT883139	Escherichia coli isolate 6666666.257727.embl plasmid I	47286-47317	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	NZ_LT883140	Escherichia coli isolate 6666666.257727.embl plasmid II	13846-13877	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	NZ_LT883141	Escherichia coli isolate 6666666.257727.embl plasmid III	68199-68230	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	NZ_CP032842	Enterobacter hormaechei strain C15117 plasmid pSPRC-Echo1, complete sequence	254192-254223	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	NZ_CP031216	Escherichia coli strain Es_ST80_L1_NDM_10_2017 plasmid pEsST80_L1_NDM, complete sequence	68738-68769	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	NZ_CP042525	Citrobacter freundii strain E11 plasmid pE11_001, complete sequence	113595-113626	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	NZ_LT991955	Enterobacter hormaechei subsp. steigerwaltii isolate C309 plasmid pC309-VIM4	120377-120408	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	NZ_CP038654	Citrobacter freundii strain 154 plasmid p154_1, complete sequence	260651-260682	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	NZ_CP022533	Enterobacter hormaechei strain MS7884A plasmid pMS7884A, complete sequence	20169-20200	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	NZ_CP038659	Citrobacter freundii strain 680 plasmid p680_1, complete sequence	354420-354451	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	MG833404	Kluyvera intermedia plasmid pEnin-51781cz, complete sequence	13719-13750	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	MG833405	Escherichia coli plasmid pEsco-4382cz, complete sequence	13719-13750	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	NZ_CP029717	UNVERIFIED_ORG: Enterobacter cloacae strain AR_0154 plasmid unnamed4, complete sequence	210298-210329	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	NZ_CP024910	Enterobacter hormaechei subsp. xiangfangensis strain OSUKPC4_L plasmid pOSUKPC4, complete sequence	143598-143629	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	MN937241	Enterobacter cloacae strain BSI034 plasmid pBSI034-MCR9, complete sequence	180649-180680	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	NZ_CP042489	Enterobacter hormaechei strain C15 plasmid pC15_001, complete sequence	117384-117415	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	NZ_LT985263	Escherichia coli strain 511 plasmid RCS54_p, complete sequence	22272-22303	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	NZ_MN540571	Escherichia coli strain E.coli4feg plasmid pIV_IncHI2_CTX_M_15, complete sequence	196848-196879	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	NZ_CP033103	Enterobacter hormaechei strain L51 plasmid pEHZJ1, complete sequence	124085-124116	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	NZ_MH829594	Enterobacter cloacae strain EC62 plasmid pIMP-4-EC62, complete sequence	243381-243412	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	NZ_MK736669	Enterobacter cloacae strain EclC2185 plasmid pEclC2185CTXM15, complete sequence	230468-230499	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	NZ_MF156266	Escherichia coli strain 24-S11 plasmid pCESC2, complete sequence	3327-3358	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	NZ_MG252892	Enterobacter cloacae strain Encl-922cz plasmid pEncl-922cz, complete sequence	13719-13750	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	NZ_MH399264	Enterobacter cloacae strain RJ702 plasmid pIMP26, complete sequence	326438-326469	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	NZ_CP049047	Enterobacter hormaechei strain Y233 plasmid pIHI2-233, complete sequence	73457-73488	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	NZ_KY887595	Escherichia coli strain Ec78 plasmid pEc78, complete sequence	202227-202258	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	NZ_KY863418	Enterobacter asburiae strain AMA 497 plasmid pOXA436, complete sequence	119296-119327	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	NZ_KY978628	Cronobacter sakazakii strain 505108 plasmid p505108-MDR, complete sequence	119872-119903	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	NZ_MF344582	Citrobacter freundii strain 525011 plasmid p525011-HI2, complete sequence	184715-184746	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	NZ_MG878867	Escherichia coli strain Ec21617 plasmid pEc21617-310, complete sequence	191339-191370	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	NZ_CP031724	Enterobacter hormaechei strain WCHEH020038 plasmid pCTXM9_020038, complete sequence	123736-123767	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	NZ_CP053191	Enterobacter hormaechei strain EGYMCRVIM plasmid pMS-37a, complete sequence	120378-120409	10	0.688
NZ_CP012344_1	1.2\|955740\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955740-955771	32	NZ_CP016838	Salmonella enterica subsp. enterica serovar Senftenberg strain 775W (ATCC 43845) plasmid pSSE-ATCC-43845, complete sequence	155766-155797	10	0.688
NZ_CP012344_1	1.5\|955923\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	955923-955954	32	AP018324	Nostoc sp. HK-01 plasmid plasmid6 DNA, complete genome	23562-23593	10	0.688
NZ_CP012344_1	1.12\|956350\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	956350-956381	32	NZ_AP021882	Sulfuriferula nivalis strain SGTM plasmid SGTM_pl1, complete sequence	1845-1876	10	0.688
NZ_CP012344_2	2.6\|973369\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	973369-973400	32	NZ_AP014579	Burkholderia sp. RPE67 plasmid p1, complete sequence	256020-256051	10	0.688
NZ_CP012344_2	2.6\|973369\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	973369-973400	32	NC_016626	Burkholderia sp. YI23 plasmid byi_1p, complete sequence	48361-48392	10	0.688
NZ_CP012344_2	2.12\|973735\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	973735-973766	32	NC_015727	Cupriavidus necator N-1 plasmid pBB1, complete sequence	1262355-1262386	10	0.688
NZ_CP012344_2	2.31\|974896\|32\|NZ_CP012344\|CRISPRCasFinder,CRT,PILER-CR	974896-974927	32	NC_019957	Mycobacterium sp. JS623 plasmid pMYCSM01, complete sequence	63429-63460	10	0.688
NZ_CP012344_1	1.13\|956411\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	956411-956442	32	NC_015498	Glaciecola sp. 4H-3-7+YE-5 plasmid pGLAAG01, complete sequence	86745-86776	11	0.656
NZ_CP012344_2	2.3\|973185\|32\|NZ_CP012344\|PILER-CR,CRISPRCasFinder,CRT	973185-973216	32	NZ_CP012899	Burkholderia sp. CCGE1001 plasmid pCCGE1001a, complete sequence	202363-202394	11	0.656
NZ_CP012344_2	2.34\|975079\|32\|NZ_CP012344\|CRISPRCasFinder,CRT	975079-975110	32	CP054927	Streptomyces fulvissimus strain NA06532 plasmid unnamed1, complete sequence	47822-47853	11	0.656

1. spacer 1.14|956472|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to CP053320 (Salmonella enterica subsp. arizonae serovar 41:z4,z23:- strain 2016K-0011 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

cgcaatgaactttgtcgcgccgcgaggcgtgc	CRISPR spacer
cgcaatgaactttgtcgcgccgcgaggcgtgc	Protospacer
********************************

2. spacer 1.16|956594|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NC_031077 (Enterobacter phage Tyrion, complete genome) position: , mismatch: 2, identity: 0.938

ccatgctccagggtagccaacctgcaagtaat	CRISPR spacer
ccatgcttcagggtagccaacctgtaagtaat	Protospacer
*******.****************.*******

3. spacer 1.16|956594|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044185 (Salmonella enterica subsp. enterica strain AR-0403 plasmid pAR-0403) position: , mismatch: 3, identity: 0.906

ccatgctccagggtagccaacctgcaagtaat	CRISPR spacer
acatgcttcagggtagccaacctgtaagtaat	Protospacer
 ******.****************.*******

4. spacer 1.16|956594|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045829 (Escherichia coli strain AUSMDU00014361 plasmid pAUSMDU00014361_02, complete sequence) position: , mismatch: 5, identity: 0.844

ccatgctccagggtagccaacctgcaagtaat	CRISPR spacer
ccatgcttcagggtagccaacctgtaagccaa	Protospacer
*******.****************.***. *

5. spacer 1.16|956594|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP028198 (Salmonella enterica subsp. enterica serovar Concord strain CFSAN018747 plasmid pGMI14-002_2, complete sequence) position: , mismatch: 5, identity: 0.844

ccatgctccagggtagccaacctgcaagtaat	CRISPR spacer
ccatgcttcagggtagccaacctgtaagccaa	Protospacer
*******.****************.***. *

6. spacer 1.16|956594|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to CP054337 (Escherichia coli strain SCU-120 plasmid pSCU-120-2, complete sequence) position: , mismatch: 5, identity: 0.844

ccatgctccagggtagccaacctgcaagtaat	CRISPR spacer
ccatgcttcagggtagccaacctgtaagccaa	Protospacer
*******.****************.***. *

7. spacer 1.16|956594|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021729 (Escherichia coli strain Combat11I9 plasmid pCombat11I9-3, complete sequence) position: , mismatch: 5, identity: 0.844

ccatgctccagggtagccaacctgcaagtaat	CRISPR spacer
ccatgcttcagggtagccaacctgtaagccaa	Protospacer
*******.****************.***. *

8. spacer 1.16|956594|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015997 (Escherichia coli strain S51 plasmid pS51_2, complete sequence) position: , mismatch: 5, identity: 0.844

ccatgctccagggtagccaacctgcaagtaat	CRISPR spacer
ccatgcttcagggtagccaacctgtaagccaa	Protospacer
*******.****************.***. *

9. spacer 1.16|956594|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to CP042641 (Escherichia coli strain NCYU-24-74 plasmid pNCYU-24-74-3, complete sequence) position: , mismatch: 5, identity: 0.844

ccatgctccagggtagccaacctgcaagtaat	CRISPR spacer
ccatgcttcagggtagccaacctgtaagccaa	Protospacer
*******.****************.***. *

10. spacer 1.16|956594|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009051 (Escherichia coli NCCP15648 plasmid p15648-1, complete sequence) position: , mismatch: 5, identity: 0.844

ccatgctccagggtagccaacctgcaagtaat	CRISPR spacer
ccatgcttcagggtagccaacctgtaagccaa	Protospacer
*******.****************.***. *

11. spacer 1.16|956594|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030183 (Salmonella enterica strain SA20030575 plasmid pSA20030575.2, complete sequence) position: , mismatch: 5, identity: 0.844

ccatgctccagggtagccaacctgcaagtaat	CRISPR spacer
ccatgcttcagggtagccaacctgtaagccaa	Protospacer
*******.****************.***. *

12. spacer 1.16|956594|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to LT906557 (Escherichia coli isolate E. coli RL465 genome assembly, plasmid: II) position: , mismatch: 5, identity: 0.844

ccatgctccagggtagccaacctgcaagtaat	CRISPR spacer
ccatgcttcagggtagccaacctgtaagccaa	Protospacer
*******.****************.***. *

13. spacer 1.16|956594|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013030 (Escherichia coli strain 2012C-4227 plasmid unnamed2, complete sequence) position: , mismatch: 5, identity: 0.844

ccatgctccagggtagccaacctgcaagtaat	CRISPR spacer
ccatgcttcagggtagccaacctgtaagccaa	Protospacer
*******.****************.***. *

14. spacer 1.16|956594|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040069 (Escherichia coli strain A1_181 plasmid p_unnamed2, complete sequence) position: , mismatch: 5, identity: 0.844

ccatgctccagggtagccaacctgcaagtaat	CRISPR spacer
ccatgcttcagggtagccaacctgtaagccaa	Protospacer
*******.****************.***. *

15. spacer 1.16|956594|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015837 (Escherichia coli strain MS6198 plasmid pMS6198C, complete sequence) position: , mismatch: 5, identity: 0.844

ccatgctccagggtagccaacctgcaagtaat	CRISPR spacer
ccatgcttcagggtagccaacctgtaagccaa	Protospacer
*******.****************.***. *

16. spacer 1.16|956594|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to KY709687 (Salmonella phage 29485, complete genome) position: , mismatch: 5, identity: 0.844

ccatgctccagggtagccaacctgcaagtaat	CRISPR spacer
ccatgcttcagggtagccaacctgtaagccaa	Protospacer
*******.****************.***. *

17. spacer 1.16|956594|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NC_050152 (Enterobacteria phage P7, complete genome) position: , mismatch: 5, identity: 0.844

ccatgctccagggtagccaacctgcaagtaat	CRISPR spacer
ccatgcttcagggtagccaacctgtaagccaa	Protospacer
*******.****************.***. *

18. spacer 1.16|956594|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to JQ806764 (Salmonella phage vB_SosS_Oslo, complete genome) position: , mismatch: 5, identity: 0.844

ccatgctccagggtagccaacctgcaagtaat	CRISPR spacer
ccatgcttcagggtagccaacctgtaagccag	Protospacer
*******.****************.***. *

19. spacer 1.16|956594|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to KF030445 (Escherichia phage 1720a-02, complete genome) position: , mismatch: 5, identity: 0.844

ccatgctccagggtagccaacctgcaagtaat	CRISPR spacer
ccatgcttcagggtagccaacctgtaagccaa	Protospacer
*******.****************.***. *

20. spacer 1.16|956594|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NC_049942 (Escherichia phage JLK-2012, complete sequence) position: , mismatch: 5, identity: 0.844

ccatgctccagggtagccaacctgcaagtaat	CRISPR spacer
ccatgcttcagggtagccaacctgtaagccaa	Protospacer
*******.****************.***. *

21. spacer 2.6|973369|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NC_015314 (Pseudonocardia dioxanivorans CB1190 plasmid pPSED01, complete sequence) position: , mismatch: 5, identity: 0.844

-agggctggctgacgcgcaccgagcgccgcaac	CRISPR spacer
tggcgctgg-tgacgcgcagcgagcgcggcaac	Protospacer
 .* ***** ********* ******* *****

22. spacer 2.12|973735|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to BK000583 (TPA_inf: Enterobacteria phage P22 wild type, complete genome) position: , mismatch: 5, identity: 0.844

ttgaggaattcttcccgcaacgcctgtttgtc	CRISPR spacer
tactggaattcttcacgcagcgcctgtttgtc	Protospacer
*   ********** ****.************

23. spacer 2.12|973735|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to MN161573 (UNVERIFIED: Salmonella virus P22 isolate HT105/1 int-201, complete genome) position: , mismatch: 5, identity: 0.844

ttgaggaattcttcccgcaacgcctgtttgtc	CRISPR spacer
tactggaattcttcacgcagcgcctgtttgtc	Protospacer
*   ********** ****.************

24. spacer 2.12|973735|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to AB426868 (Enterobacteria phage P22 DNA, complete genome, strain: ATCC 19585-B1) position: , mismatch: 5, identity: 0.844

ttgaggaattcttcccgcaacgcctgtttgtc	CRISPR spacer
tactggaattcttcacgcagcgcctgtttgtc	Protospacer
*   ********** ****.************

25. spacer 2.12|973735|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to KR296686 (Salmonella phage 22, complete genome) position: , mismatch: 5, identity: 0.844

ttgaggaattcttcccgcaacgcctgtttgtc	CRISPR spacer
tactggaattcttcacgcagcgcctgtttgtc	Protospacer
*   ********** ****.************

26. spacer 2.12|973735|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to L06296 (Bacteriophage P22 eaA - eaI genes, complete cds) position: , mismatch: 5, identity: 0.844

ttgaggaattcttcccgcaacgcctgtttgtc	CRISPR spacer
tactggaattcttcacgcagcgcctgtttgtc	Protospacer
*   ********** ****.************

27. spacer 2.12|973735|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NC_002371 (Enterobacteria phage P22 virus, complete genome) position: , mismatch: 5, identity: 0.844

ttgaggaattcttcccgcaacgcctgtttgtc	CRISPR spacer
tactggaattcttcacgcagcgcctgtttgtc	Protospacer
*   ********** ****.************

28. spacer 2.12|973735|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to KR296688 (Salmonella phage 34, complete genome) position: , mismatch: 5, identity: 0.844

ttgaggaattcttcccgcaacgcctgtttgtc	CRISPR spacer
tactggaattcttcacgcagcgcctgtttgtc	Protospacer
*   ********** ****.************

29. spacer 2.12|973735|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to AF217253 (Bacteriophage P22 complete genome) position: , mismatch: 5, identity: 0.844

ttgaggaattcttcccgcaacgcctgtttgtc	CRISPR spacer
tactggaattcttcacgcagcgcctgtttgtc	Protospacer
*   ********** ****.************

30. spacer 2.12|973735|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to KR296687 (Salmonella phage 25, complete genome) position: , mismatch: 5, identity: 0.844

ttgaggaattcttcccgcaacgcctgtttgtc	CRISPR spacer
tactggaattcttcacgcagcgcctgtttgtc	Protospacer
*   ********** ****.************

31. spacer 2.12|973735|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to AB362338 (Enterobacteria phage P22 DNA, complete sequence, strain: MSU) position: , mismatch: 5, identity: 0.844

ttgaggaattcttcccgcaacgcctgtttgtc	CRISPR spacer
tactggaattcttcacgcagcgcctgtttgtc	Protospacer
*   ********** ****.************

32. spacer 2.12|973735|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to AF527608 (Bacteriophage P22-pbi, complete sequence) position: , mismatch: 5, identity: 0.844

ttgaggaattcttcccgcaacgcctgtttgtc	CRISPR spacer
tactggaattcttcacgcagcgcctgtttgtc	Protospacer
*   ********** ****.************

33. spacer 2.12|973735|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to EU570103 (Salmonella phage epsilon34, complete genome) position: , mismatch: 5, identity: 0.844

ttgaggaattcttcccgcaacgcctgtttgtc	CRISPR spacer
tactggaattcttcacgcagcgcctgtttgtc	Protospacer
*   ********** ****.************

34. spacer 2.12|973735|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NC_047875 (Salmonella phage UPF_BP1, complete genome) position: , mismatch: 5, identity: 0.844

ttgaggaattcttcccgcaacgcctgtttgtc	CRISPR spacer
tactggaattcttcacgcagcgcctgtttgtc	Protospacer
*   ********** ****.************

35. spacer 2.6|973369|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012940 (Ralstonia solanacearum strain UW163 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.812

agggctggctgacgcgcaccgagcgccgcaac-	CRISPR spacer
acggctggctggcgcgcatcgagcg-cgcgccc	Protospacer
* *********.******.****** ***. *

36. spacer 2.6|973369|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012944 (Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.812

agggctggctgacgcgcaccgagcgccgcaac-	CRISPR spacer
acggctggctggcgcgcatcgagcg-cgcgccc	Protospacer
* *********.******.****** ***. *

37. spacer 2.6|973369|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NC_017575 (Ralstonia solanacearum Po82 megaplasmid, complete sequence) position: , mismatch: 6, identity: 0.812

agggctggctgacgcgcaccgagcgccgcaac-	CRISPR spacer
acggctggctggcgcgcatcgagcg-cgcgccc	Protospacer
* *********.******.****** ***. *

38. spacer 2.6|973369|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP051295 (Ralstonia solanacearum strain CIAT_078 plasmid megaplasmid, complete sequence) position: , mismatch: 6, identity: 0.812

agggctggctgacgcgcaccgagcgccgcaac-	CRISPR spacer
acggctggctggcgcgcatcgagcg-cgcgccc	Protospacer
* *********.******.****** ***. *

39. spacer 2.25|974530|32|NZ_CP012344|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025513 (Neorhizobium sp. SOG26 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.812

ccgtccagctccacatgctcgccaatctcctg	CRISPR spacer
ccgtccagctcggcatgctcgccatcctgatg	Protospacer
*********** .*********** .**  **

40. spacer 2.30|974835|32|NZ_CP012344|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022991 (Paraburkholderia aromaticivorans strain BN5 plasmid pBN1, complete sequence) position: , mismatch: 6, identity: 0.812

ggcaactgggcgatcatctgggc-gctgtttat	CRISPR spacer
cgcaactgggcgatcaactgtgcggctgcttc-	Protospacer
 *************** *** ** ****.**

41. spacer 1.4|955862|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to MN693553 (Marine virus AFVG_25M446, complete genome) position: , mismatch: 7, identity: 0.781

tcaaacggttctggaacatctaaaaatacatg	CRISPR spacer
tctaaatcttctataacatctaaaaatacatc	Protospacer
** **   ****. *****************

42. spacer 1.4|955862|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to MN693421 (Marine virus AFVG_25M197, complete genome) position: , mismatch: 7, identity: 0.781

tcaaacggttctggaacatctaaaaatacatg	CRISPR spacer
tctaaatcttctataacatctaaaaatacatc	Protospacer
** **   ****. *****************

43. spacer 1.4|955862|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to MN693283 (Marine virus AFVG_25M198, complete genome) position: , mismatch: 7, identity: 0.781

tcaaacggttctggaacatctaaaaatacatg	CRISPR spacer
tctaaatcttctataacatctaaaaatacatc	Protospacer
** **   ****. *****************

44. spacer 1.4|955862|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to MN693381 (Marine virus AFVG_25M224, complete genome) position: , mismatch: 7, identity: 0.781

tcaaacggttctggaacatctaaaaatacatg	CRISPR spacer
tctaaatcttctataacatctaaaaatacatc	Protospacer
** **   ****. *****************

45. spacer 1.4|955862|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to MN693277 (Marine virus AFVG_25M240, complete genome) position: , mismatch: 7, identity: 0.781

tcaaacggttctggaacatctaaaaatacatg	CRISPR spacer
tctaaatcttctataacatctaaaaatacatc	Protospacer
** **   ****. *****************

46. spacer 2.6|973369|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 7, identity: 0.781

agggctggctgacgcgcaccgagcgccgcaac	CRISPR spacer
accgcacgccgacgcgcaccgagcggcgcatc	Protospacer
*  **  **.*************** **** *

47. spacer 2.6|973369|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 7, identity: 0.781

agggctggctgacgcgcaccgagcgccgcaac	CRISPR spacer
atcgcacgccgacgcgcaccgagcggcgcatc	Protospacer
*  **  **.*************** **** *

48. spacer 2.6|973369|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 7, identity: 0.781

agggctggctgacgcgcaccgagcgccgcaac	CRISPR spacer
atcgcacgccgacgcgcaccgagcggcgcatc	Protospacer
*  **  **.*************** **** *

49. spacer 2.6|973369|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 7, identity: 0.781

agggctggctgacgcgcaccgagcgccgcaac	CRISPR spacer
atcgcacgccgacgcgcaccgagcggcgcatc	Protospacer
*  **  **.*************** **** *

50. spacer 2.27|974652|32|NZ_CP012344|CRISPRCasFinder,CRT,PILER-CR matches to KR093648 (Moraxella phage Mcat24, complete genome) position: , mismatch: 7, identity: 0.781

ttagccatccccataccaaagttaa--agtcgta	CRISPR spacer
ccagccatcaccataccaatgttaaatagtct--	Protospacer
..******* ********* *****  ****

51. spacer 2.27|974652|32|NZ_CP012344|CRISPRCasFinder,CRT,PILER-CR matches to KR093648 (Moraxella phage Mcat24, complete genome) position: , mismatch: 7, identity: 0.781

ttagccatccccataccaaagttaa--agtcgta	CRISPR spacer
ccagccatcaccataccaatgttaaatagtct--	Protospacer
..******* ********* *****  ****

52. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP048420 (Sphingomonas insulae strain KCTC 12872 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.75

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
cccggatacatgtaccaggtcaggccgacgtc	Protospacer
*  *****  *****************   *

53. spacer 1.3|955801|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NC_013940 (Deferribacter desulfuricans SSM1 megaplasmid pDF308, complete sequence) position: , mismatch: 8, identity: 0.75

caaaatcaaaatttcgaaataaatgattggaa	CRISPR spacer
caaagtcaaaatttcaaaataaatgtacaaca	Protospacer
****.**********.*********  ... *

54. spacer 1.3|955801|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP047810 (Staphylococcus aureus strain UP_1591 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

caaaatcaaaatttcgaaataaatgattggaa	CRISPR spacer
caaattcaaaatttccaaataaacattttaat	Protospacer
**** ********** *******.. ** .*

55. spacer 1.3|955801|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to MN693375 (Marine virus AFVG_25M113, complete genome) position: , mismatch: 8, identity: 0.75

caaaatcaaaatttcgaaataaatgattggaa	CRISPR spacer
caaaattaaaatttccaaataaagaaatgtct	Protospacer
******.******** ******* .* **

56. spacer 1.3|955801|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to MN693061 (Marine virus AFVG_25M430, complete genome) position: , mismatch: 8, identity: 0.75

caaaatcaaaatttcgaaataaatgattggaa	CRISPR spacer
caaaatcaaagttttgaaataaagcaaacaaa	Protospacer
**********.***.********  *   .**

57. spacer 1.4|955862|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009691 (Bacillus mycoides strain ATCC 6462 plasmid pBMX_1, complete sequence) position: , mismatch: 8, identity: 0.75

tcaaacggttctggaacatctaaaaatacatg	CRISPR spacer
caatgactttctggaacatctaaaaatacatt	Protospacer
. * .   ***********************

58. spacer 1.4|955862|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to CP037991 (Bacillus mycoides strain TH26 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

tcaaacggttctggaacatctaaaaatacatg	CRISPR spacer
caatgactttctggaacatctaaaaatacatt	Protospacer
. * .   ***********************

59. spacer 1.4|955862|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013139 (Pseudoalteromonas sp. Bsw20308 plasmid pPBSW1, complete sequence) position: , mismatch: 8, identity: 0.75

tcaaacggttctggaacatctaaaaatacatg	CRISPR spacer
tcaccatgttctggatcacctaaaaatacaat	Protospacer
***    ******** **.***********

60. spacer 1.18|956716|32|NZ_CP012344|CRISPRCasFinder,CRT matches to NC_014310 (Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence) position: , mismatch: 8, identity: 0.75

cacgagtggcaaattgatttcgacgaaaaacc	CRISPR spacer
ccagagcggcaaatggatttcgacgacctacg	Protospacer
*  ***.******* ***********   **

61. spacer 1.18|956716|32|NZ_CP012344|CRISPRCasFinder,CRT matches to NZ_CP022760 (Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

cacgagtggcaaattgatttcgacgaaaaacc	CRISPR spacer
ccagagcggcaaatggatttcgacgacctacg	Protospacer
*  ***.******* ***********   **

62. spacer 1.18|956716|32|NZ_CP012344|CRISPRCasFinder,CRT matches to NZ_CP022789 (Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

cacgagtggcaaattgatttcgacgaaaaacc	CRISPR spacer
ccagagcggcaaatggatttcgacgacctacg	Protospacer
*  ***.******* ***********   **

63. spacer 2.6|973369|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP021845 (Azospira sp. I09 plasmid pAZI09, complete sequence) position: , mismatch: 8, identity: 0.75

agggctggctgacgcgcaccgagcgccgcaac	CRISPR spacer
caggccggctgacgctcaccgagcgccccgca	Protospacer
 .***.********* *********** *.

64. spacer 2.6|973369|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NC_003324 (Sinorhizobium phage PBC5, complete genome) position: , mismatch: 8, identity: 0.75

agggctggctgacgcgcaccgagcgccgcaac	CRISPR spacer
gcggaatgttgacgcgccccgtgcgccgcaac	Protospacer
. **   *.******** *** **********

65. spacer 2.6|973369|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to AF448724 (Sinorhizobium meliloti phage PBC5, complete genome) position: , mismatch: 8, identity: 0.75

agggctggctgacgcgcaccgagcgccgcaac	CRISPR spacer
gcggaatgttgacgcgccccgtgcgccgcaac	Protospacer
. **   *.******** *** **********

66. spacer 2.7|973430|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NC_015851 (Acidithiobacillus caldus SM-1 megaplasmid, complete sequence) position: , mismatch: 8, identity: 0.75

gggctatatccacgccaaagggccgcgcgaca	CRISPR spacer
ggcgtatctccacgcccaagggccgcgagttc	Protospacer
**  *** ******** ********** * .

67. spacer 2.25|974530|32|NZ_CP012344|CRISPRCasFinder,CRT,PILER-CR matches to MT006236 (Bifidobacterium phage BitterVaud1, complete genome) position: , mismatch: 8, identity: 0.75

ccgtccagctccacatgctcgccaatctcctg	CRISPR spacer
cgaatcagcaccacatgctcgccattcttcag	Protospacer
* . .**** ************** ***.* *

68. spacer 2.29|974774|32|NZ_CP012344|CRISPRCasFinder,CRT,PILER-CR matches to MN033396 (Leviviridae sp. isolate H1_Bulk_Litter_5_scaffold_5325 sequence) position: , mismatch: 8, identity: 0.75

gctgcgttcaacaacggggaaatgccggagaa	CRISPR spacer
cccctcttcaacaaccgggaaatgtcggagta	Protospacer
 *. . ********* ********.***** *

69. spacer 2.29|974774|32|NZ_CP012344|CRISPRCasFinder,CRT,PILER-CR matches to MN035738 (Leviviridae sp. isolate H3_Bulk_Litter_16_11121 sequence) position: , mismatch: 8, identity: 0.75

gctgcgttcaacaacggggaaatgccggagaa	CRISPR spacer
cccctcttcaacaaccgggaaatgtcggagta	Protospacer
 *. . ********* ********.***** *

70. spacer 1.3|955801|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NC_014633 (Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequence) position: , mismatch: 9, identity: 0.719

caaaatcaaaatttcgaaataaatgattggaa	CRISPR spacer
ttttatcaaaattttgaaataaatgcttttat	Protospacer
.   **********.********** **  *

71. spacer 1.3|955801|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to CP002964 (Emticicia oligotrophica DSM 17448 plasmid pEMTOL03, complete sequence) position: , mismatch: 9, identity: 0.719

caaaatcaaaatttcgaaataaatgattggaa	CRISPR spacer
gaaaatcaaaatttcgataaaaatcaagctca	Protospacer
 **************** * **** *     *

72. spacer 1.3|955801|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to LR588166 (Pseudomonas phage vB_PaeM_MIJ3) position: , mismatch: 9, identity: 0.719

caaaatcaaaatttcgaaataaatgattggaa	CRISPR spacer
ttaaatcaaaaatacgaaataaatgcaagaat	Protospacer
. ********* * ***********   *.*

73. spacer 1.3|955801|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to MH121069 (Pseudomonas phage vB_PaeM_PA5oct, complete genome) position: , mismatch: 9, identity: 0.719

caaaatcaaaatttcgaaataaatgattggaa	CRISPR spacer
ttaaatcaaaaatacgaaataaatgcaagaat	Protospacer
. ********* * ***********   *.*

74. spacer 1.7|956045|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NC_019401 (Cronobacter phage vB_CsaM_GAP32, complete genome) position: , mismatch: 9, identity: 0.719

ttcaga---acgattatattttgatttgtgttcag	CRISPR spacer
---aaagtcgcgattattttttgatttgtattcgt	Protospacer
   *.*   .******* ***********.***.

75. spacer 1.18|956716|32|NZ_CP012344|CRISPRCasFinder,CRT matches to NZ_CP022775 (Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

cacgagtggcaaattgatttcgacgaaaaacc	CRISPR spacer
tcagagcggcaaatggatttcgacgacctacg	Protospacer
.  ***.******* ***********   **

76. spacer 1.18|956716|32|NZ_CP012344|CRISPRCasFinder,CRT matches to NZ_CP022762 (Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

cacgagtggcaaattgatttcgacgaaaaacc	CRISPR spacer
tcagagcggcaaatggatttcgacgacctacg	Protospacer
.  ***.******* ***********   **

77. spacer 1.18|956716|32|NZ_CP012344|CRISPRCasFinder,CRT matches to NZ_CP023017 (Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

cacgagtggcaaattgatttcgacgaaaaacc	CRISPR spacer
tcagagcggcaaatggatttcgacgacctacg	Protospacer
.  ***.******* ***********   **

78. spacer 1.18|956716|32|NZ_CP012344|CRISPRCasFinder,CRT matches to NZ_CP014703 (Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence) position: , mismatch: 9, identity: 0.719

cacgagtggcaaattgatttcgacgaaaaacc	CRISPR spacer
tcagagcggcaaatggatttcgacgacctacg	Protospacer
.  ***.******* ***********   **

79. spacer 1.18|956716|32|NZ_CP012344|CRISPRCasFinder,CRT matches to NZ_CP022771 (Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

cacgagtggcaaattgatttcgacgaaaaacc	CRISPR spacer
tcagagcggcaaatggatttcgacgacctacg	Protospacer
.  ***.******* ***********   **

80. spacer 1.18|956716|32|NZ_CP012344|CRISPRCasFinder,CRT matches to NZ_CP022777 (Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

cacgagtggcaaattgatttcgacgaaaaacc	CRISPR spacer
tcagagcggcaaatggatttcgacgacctacg	Protospacer
.  ***.******* ***********   **

81. spacer 1.18|956716|32|NZ_CP012344|CRISPRCasFinder,CRT matches to NZ_CP022799 (Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

cacgagtggcaaattgatttcgacgaaaaacc	CRISPR spacer
tcagagcggcaaatggatttcgacgacctacg	Protospacer
.  ***.******* ***********   **

82. spacer 1.18|956716|32|NZ_CP012344|CRISPRCasFinder,CRT matches to NZ_CP022764 (Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

cacgagtggcaaattgatttcgacgaaaaacc	CRISPR spacer
tcagagcggcaaatggatttcgacgacctacg	Protospacer
.  ***.******* ***********   **

83. spacer 1.18|956716|32|NZ_CP012344|CRISPRCasFinder,CRT matches to NZ_CP022797 (Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

cacgagtggcaaattgatttcgacgaaaaacc	CRISPR spacer
tcagagcggcaaatggatttcgacgacctacg	Protospacer
.  ***.******* ***********   **

84. spacer 1.18|956716|32|NZ_CP012344|CRISPRCasFinder,CRT matches to NZ_CP022758 (Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

cacgagtggcaaattgatttcgacgaaaaacc	CRISPR spacer
tcagagcggcaaatggatttcgacgacctacg	Protospacer
.  ***.******* ***********   **

85. spacer 2.1|973063|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034186 (Deinococcus sp. S14-83 strain S14-83T plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

gcggactcctgcacctctttgagcccgtcgat	CRISPR spacer
ccggactccagcacgtctttgagcttctaact	Protospacer
 ******** **** *********.. * . *

86. spacer 2.1|973063|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP038257 (Microbacterium sediminis strain YLB-01 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

gcggactcctgcacctctttgagcccgtcgat	CRISPR spacer
gcattgcgctgcacctcgtcgagcccgtcgaa	Protospacer
**.   . ********* *.***********

87. spacer 2.6|973369|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NC_012586 (Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence) position: , mismatch: 9, identity: 0.719

agggctggctgacgcgcaccgagcgccgcaac	CRISPR spacer
cggcgacgctgatgagcaccgagcgccgcacg	Protospacer
 **    *****.* ***************

88. spacer 2.6|973369|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to MF344569 (Pseudomonas aeruginosa plasmid p12939-PER, complete sequence) position: , mismatch: 9, identity: 0.719

agggctggctgacgcgcaccgagcgccgcaac-	CRISPR spacer
cgggctggccgacgcgcagcgagc-cggtggtc	Protospacer
 ********.******** ***** * *....

89. spacer 2.6|973369|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010016 (Burkholderia thailandensis 34 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

agggctggctgacgcgcaccgagcgccgcaac	CRISPR spacer
tcgcgccgctgccgcgcaccgagcgctgcatc	Protospacer
  *  . **** **************.*** *

90. spacer 2.25|974530|32|NZ_CP012344|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP054613 (Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence) position: , mismatch: 9, identity: 0.719

ccgtccagctccacatgctcgcca------atctcctg	CRISPR spacer
acgtccagctccacttgttcgccatcgagtat------	Protospacer
 ************* **.******      **

91. spacer 2.30|974835|32|NZ_CP012344|CRISPRCasFinder,CRT,PILER-CR matches to NC_011887 (Methylobacterium nodulans ORS 2060 plasmid pMNOD02, complete sequence) position: , mismatch: 9, identity: 0.719

ggcaactgggcgatcatctgggcgctgtttat	CRISPR spacer
atcgcctgggcgatcatctggccgatgtcctt	Protospacer
. *. **************** ** ***.. *

92. spacer 2.33|975018|32|NZ_CP012344|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP050096 (Rhizobium leguminosarum bv. trifolii strain 22B plasmid pRL22b3, complete sequence) position: , mismatch: 9, identity: 0.719

ttgaata---cgtcgcgataccagtcactccggaa	CRISPR spacer
---agtgtgccgtcgcgataccagtcagtcaggcc	Protospacer
   *.*.   ***************** ** **

93. spacer 2.33|975018|32|NZ_CP012344|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP050102 (Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b2, complete sequence) position: , mismatch: 9, identity: 0.719

ttgaata---cgtcgcgataccagtcactccggaa	CRISPR spacer
---agtgtgccgtcgcgataccagtcagtcaggcc	Protospacer
   *.*.   ***************** ** **

94. spacer 2.33|975018|32|NZ_CP012344|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP050107 (Rhizobium leguminosarum bv. trifolii strain 4B plasmid pRL4b1, complete sequence) position: , mismatch: 9, identity: 0.719

ttgaata---cgtcgcgataccagtcactccggaa	CRISPR spacer
---agtgtgccgtcgcgataccagtcagtcaggcc	Protospacer
   *.*.   ***************** ** **

95. spacer 2.33|975018|32|NZ_CP012344|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP050112 (Rhizobium leguminosarum bv. trifolii strain 3B plasmid pRL3b5, complete sequence) position: , mismatch: 9, identity: 0.719

ttgaata---cgtcgcgataccagtcactccggaa	CRISPR spacer
---agtgtgccgtcgcgataccagtcagtcaggcc	Protospacer
   *.*.   ***************** ** **

96. spacer 2.33|975018|32|NZ_CP012344|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP048285 (Rhizobium leguminosarum bv. viciae 248 plasmid pRle248a, complete sequence) position: , mismatch: 9, identity: 0.719

ttgaata---cgtcgcgataccagtcactccggaa	CRISPR spacer
---agtgtgccgtcgcgataccagtcagtcaggcc	Protospacer
   *.*.   ***************** ** **

97. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KX710093 (Leclercia adecarboxylata strain pP10164 plasmid pP10164-2, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtgatgccgcgccc	Protospacer
 ... * ************* * *******.

98. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016764 (Citrobacter freundii strain B38 plasmid pOZ181, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtgatgccgcgccc	Protospacer
 ... * ************* * *******.

99. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KX810825 (Salmonella enterica subsp. enterica serovar Typhimurium strain MU1 plasmid pIMP4-SEM1, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtgatgccgcgccc	Protospacer
 ... * ************* * *******.

100. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LN830952 (Enterobacter sp. 247 strain 247 BMC plasmid pEB247, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtgatgccgcgccc	Protospacer
 ... * ************* * *******.

101. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KP975077 (Enterobacter cloacae strain MRSN17626 plasmid pMRVIM0813, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtgatgccgcgccc	Protospacer
 ... * ************* * *******.

102. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KM107842 (Escherichia coli strain G3/10 plasmid pSYM6, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtaatgccgcgccc	Protospacer
 ... * ************* * *******.

103. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP028197 (Salmonella enterica subsp. enterica serovar Concord strain CFSAN018747 plasmid pGMI14-002_1, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtgatgccgcgccc	Protospacer
 ... * ************* * *******.

104. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP028197 (Salmonella enterica subsp. enterica serovar Concord strain CFSAN018747 plasmid pGMI14-002_1, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtgatgccgcgccc	Protospacer
 ... * ************* * *******.

105. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011601 (Phytobacter ursingii strain CAV1151 plasmid pCAV1151-296, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtgatgccgcgccc	Protospacer
 ... * ************* * *******.

106. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to CP019195 (Salmonella enterica subsp. enterica serovar Senftenberg str. ATCC 43845 plasmid pATCC43845, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtaatgccgcgccc	Protospacer
 ... * ************* * *******.

107. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP028975 (Cronobacter sakazakii strain GZcsf-1 plasmid pGW1, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtgatgccgcgccc	Protospacer
 ... * ************* * *******.

108. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP048350 (Raoultella ornithinolytica strain 23 plasmid p23_A-OXA140, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtgatgccgcgccc	Protospacer
 ... * ************* * *******.

109. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NC_025058 (Escherichia coli strain TB22 plasmid pEC22, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtaatgccgcgccc	Protospacer
 ... * ************* * *******.

110. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010179 (Escherichia coli strain H15 plasmid A, complete genome) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtaatgccgcgccc	Protospacer
 ... * ************* * *******.

111. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029729 (Citrobacter sp. CRE-46 strain AR_0157 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtaatgccgcgccc	Protospacer
 ... * ************* * *******.

112. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042506 (Leclercia adecarboxylata strain E1 plasmid pE1_001, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtgatgccgcgccc	Protospacer
 ... * ************* * *******.

113. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039717 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS000211 plasmid p10-3184.1, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtaatgccgcgccc	Protospacer
 ... * ************* * *******.

114. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to MT077884 (Escherichia coli plasmid p33, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtgatgccgcgccc	Protospacer
 ... * ************* * *******.

115. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to MT077886 (Escherichia coli plasmid p39, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtgatgccgcgccc	Protospacer
 ... * ************* * *******.

116. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP037875 (Salmonella enterica subsp. enterica serovar 4,[5],12:i:- strain PNCS015054 plasmid pPNCS015054_S2, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtaatgccgcgccc	Protospacer
 ... * ************* * *******.

117. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to MN423361 (Leclercia sp. strain 1106151 plasmid p1106151-mcr, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtgatgccgcgccc	Protospacer
 ... * ************* * *******.

118. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044204 (Salmonella enterica subsp. enterica serovar Senftenberg strain AR-0405 plasmid pAR-0405, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtaatgccgcgccc	Protospacer
 ... * ************* * *******.

119. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020529 (Enterobacter cloacae strain 174 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtgatgccgcgccc	Protospacer
 ... * ************* * *******.

120. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to LC556211 (Enterobacter cloacae CC32 plasmid pCC32 DNA, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtgatgccgcgccc	Protospacer
 ... * ************* * *******.

121. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP031567 (Enterobacter hormaechei strain 2013_1a plasmid pIncHI2-1301491, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtgatgccgcgccc	Protospacer
 ... * ************* * *******.

122. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039559 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014846 plasmid p08-4425.1, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtaatgccgcgccc	Protospacer
 ... * ************* * *******.

123. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030080 (Enterobacter hormaechei strain 20710 plasmid pIMP-20710, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtgatgccgcgccc	Protospacer
 ... * ************* * *******.

124. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP008825 (UNVERIFIED_ORG: Enterobacter cloacae ECNIH2 plasmid pKPC-272, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtgatgccgcgccc	Protospacer
 ... * ************* * *******.

125. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024878 (Klebsiella pneumoniae strain NH25 plasmid pNH25.4, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtgatgccgcgccc	Protospacer
 ... * ************* * *******.

126. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022696 (Citrobacter farmeri strain AUSMDU00008141 plasmid pAUSMDU8141-1, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtgatgccgcgccc	Protospacer
 ... * ************* * *******.

127. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052871 (Enterobacter cloacae strain 3849 plasmid p3846_IncHI2_mcr, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtgatgccgcgccc	Protospacer
 ... * ************* * *******.

128. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to CP049311 (Salmonella enterica subsp. enterica serovar Heidelberg strain CVM N53023 plasmid pN53023, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtgatgccgcgccc	Protospacer
 ... * ************* * *******.

129. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LT991958 (Enterobacter cloacae complex sp. isolate C45 plasmid pC45-VIM4) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtgatgccgcgccc	Protospacer
 ... * ************* * *******.

130. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029037 (Salmonella enterica subsp. enterica serovar Senftenberg str. 361154004 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtgatgccgcgccc	Protospacer
 ... * ************* * *******.

131. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP043855 (Enterobacter hormaechei strain EB_P6_L3_02.19 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtgatgccgcgccc	Protospacer
 ... * ************* * *******.

132. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044215 (Klebsiella aerogenes strain KA_P10_L5_03.19 plasmid pIMPIncH12_334kb, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtgatgccgcgccc	Protospacer
 ... * ************* * *******.

133. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026206 (Escherichia coli strain ECONIH5 plasmid pECO-cbb3, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtaatgccgcgccc	Protospacer
 ... * ************* * *******.

134. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to CP049309 (Salmonella enterica subsp. enterica serovar Johannesburg strain CVM N58011 plasmid p58011, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtgatgccgcgccc	Protospacer
 ... * ************* * *******.

135. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024813 (Enterobacter sp. CRENT-193 plasmid pCRENT-193_1, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtgatgccgcgccc	Protospacer
 ... * ************* * *******.

136. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030186 (Salmonella enterica strain SA20094620 plasmid pSA20094620.1, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtgatgccgcgccc	Protospacer
 ... * ************* * *******.

137. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042494 (Leclercia adecarboxylata strain E61 plasmid pE61_001, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtgatgccgcgccc	Protospacer
 ... * ************* * *******.

138. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040696 (Citrobacter freundii strain R47 plasmid pR47-309, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtgatgccgcgccc	Protospacer
 ... * ************* * *******.

139. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026404 (Escherichia coli strain ECONIH4 plasmid pECO-6357, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtaatgccgcgccc	Protospacer
 ... * ************* * *******.

140. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030920 (Escherichia coli strain KL53 plasmid pKL53-L, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtaatgccgcgccc	Protospacer
 ... * ************* * *******.

141. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042552 (Enterobacter hormaechei strain C45 plasmid pC45_001, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtgatgccgcgccc	Protospacer
 ... * ************* * *******.

142. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039271 (Salmonella enterica subsp. enterica serovar Senftenberg str. CFSAN004025 plasmid pCFSAN004025.1, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtgatgccgcgccc	Protospacer
 ... * ************* * *******.

143. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016526 (Salmonella enterica subsp. enterica serovar Heidelberg strain 09-036813-1A plasmid p09-036813-1A_261, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtgatgccgcgccc	Protospacer
 ... * ************* * *******.

144. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP031575 (Enterobacter hormaechei strain A1 plasmid pIncHI2-1502264, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtgatgccgcgccc	Protospacer
 ... * ************* * *******.

145. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to CP050163 (Escherichia coli plasmid Carbapenemase(KPC-2)_IncHI2, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtgatgccgcgccc	Protospacer
 ... * ************* * *******.

146. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041734 (Enterobacter hormaechei subsp. steigerwaltii strain ME-1 plasmid pME-1a, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtgatgccgcgccc	Protospacer
 ... * ************* * *******.

147. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023570 (Enterobacter hormaechei strain BW plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtgatgccgcgccc	Protospacer
 ... * ************* * *******.

148. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to LC532224 (Enterobacter hormaechei subsp. xiangfangensis A2483 plasmid pA2483mcr-9 DNA, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtgatgccgcgccc	Protospacer
 ... * ************* * *******.

149. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to LC532226 (Enterobacter hormaechei subsp. xiangfangensis A2504 plasmid pA2504mcr-9 DNA, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtgatgccgcgccc	Protospacer
 ... * ************* * *******.

150. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018460 (Klebsiella pneumoniae strain Kp_Goe_39795 plasmid pKp_Goe_795-1, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtgatgccgcgccc	Protospacer
 ... * ************* * *******.

151. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to LN794248 (Salmonella enterica subsp. enterica serovar Typhimurium plasmid incHI2, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtgatgccgcgccc	Protospacer
 ... * ************* * *******.

152. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029248 (Enterobacter hormaechei subsp. xiangfangensis strain OSUVMCKPC4-2 plasmid pOSUEC_D, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtgatgccgcgccc	Protospacer
 ... * ************* * *******.

153. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP031102 (Leclercia sp. W17 plasmid pW17-1, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtgatgccgcgccc	Protospacer
 ... * ************* * *******.

154. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to LC542971 (Escherichia coli IOMTU413 plasmid pIOMTU413 DNA, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtgatgccgcgccc	Protospacer
 ... * ************* * *******.

155. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to LC542972 (Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtgatgccgcgccc	Protospacer
 ... * ************* * *******.

156. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053283 (Escherichia coli strain SCU-308 plasmid pSCU-308-2, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtgatgccgcgccc	Protospacer
 ... * ************* * *******.

157. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NC_024983 (Salmonella enterica subsp. enterica serovar Typhimurium plasmid pSTm-A54650, strain A54560, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtgatgccgcgccc	Protospacer
 ... * ************* * *******.

158. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044968 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS007098 plasmid pPNCS014881.1, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtaatgccgcgccc	Protospacer
 ... * ************* * *******.

159. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044958 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS007087 plasmid pPNCS007087.1, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtaatgccgcgccc	Protospacer
 ... * ************* * *******.

160. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP043767 (Enterobacter hormaechei strain EB_P9_L5_03.19 plasmid pIMPIncH12_331kb, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtgatgccgcgccc	Protospacer
 ... * ************* * *******.

161. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013215 (Klebsiella pneumoniae subsp. pneumoniae strain H11 plasmid pH11, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtgatgccgcgccc	Protospacer
 ... * ************* * *******.

162. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027144 (Enterobacter hormaechei subsp. hoffmannii strain AR_0365 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtgatgccgcgccc	Protospacer
 ... * ************* * *******.

163. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021463 (Salmonella enterica subsp. enterica serovar Typhimurium strain UGA14 plasmid pUGA14_1, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtgatgccgcgccc	Protospacer
 ... * ************* * *******.

164. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NC_012556 (Enterobacter cloacae plasmid pEC-IMPQ, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtgatgccgcgccc	Protospacer
 ... * ************* * *******.

165. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NC_012555 (Enterobacter cloacae plasmid pEC-IMP, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtgatgccgcgccc	Protospacer
 ... * ************* * *******.

166. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042579 (Enterobacter kobei strain C16 plasmid pC16_001, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtgatgccgcgccc	Protospacer
 ... * ************* * *******.

167. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LT883139 (Escherichia coli isolate 6666666.257727.embl plasmid I) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtaatgccgcgccc	Protospacer
 ... * ************* * *******.

168. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LT883140 (Escherichia coli isolate 6666666.257727.embl plasmid II) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtaatgccgcgccc	Protospacer
 ... * ************* * *******.

169. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LT883141 (Escherichia coli isolate 6666666.257727.embl plasmid III) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtaatgccgcgccc	Protospacer
 ... * ************* * *******.

170. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032842 (Enterobacter hormaechei strain C15117 plasmid pSPRC-Echo1, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtgatgccgcgccc	Protospacer
 ... * ************* * *******.

171. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP031216 (Escherichia coli strain Es_ST80_L1_NDM_10_2017 plasmid pEsST80_L1_NDM, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtaatgccgcgccc	Protospacer
 ... * ************* * *******.

172. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042525 (Citrobacter freundii strain E11 plasmid pE11_001, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtgatgccgcgccc	Protospacer
 ... * ************* * *******.

173. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LT991955 (Enterobacter hormaechei subsp. steigerwaltii isolate C309 plasmid pC309-VIM4) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtgatgccgcgccc	Protospacer
 ... * ************* * *******.

174. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP038654 (Citrobacter freundii strain 154 plasmid p154_1, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtgatgccgcgccc	Protospacer
 ... * ************* * *******.

175. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022533 (Enterobacter hormaechei strain MS7884A plasmid pMS7884A, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtgatgccgcgccc	Protospacer
 ... * ************* * *******.

176. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP038659 (Citrobacter freundii strain 680 plasmid p680_1, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtgatgccgcgccc	Protospacer
 ... * ************* * *******.

177. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to MG833404 (Kluyvera intermedia plasmid pEnin-51781cz, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtaatgccgcgccc	Protospacer
 ... * ************* * *******.

178. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to MG833405 (Escherichia coli plasmid pEsco-4382cz, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtaatgccgcgccc	Protospacer
 ... * ************* * *******.

179. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029717 (UNVERIFIED_ORG: Enterobacter cloacae strain AR_0154 plasmid unnamed4, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtgatgccgcgccc	Protospacer
 ... * ************* * *******.

180. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024910 (Enterobacter hormaechei subsp. xiangfangensis strain OSUKPC4_L plasmid pOSUKPC4, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtgatgccgcgccc	Protospacer
 ... * ************* * *******.

181. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to MN937241 (Enterobacter cloacae strain BSI034 plasmid pBSI034-MCR9, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtgatgccgcgccc	Protospacer
 ... * ************* * *******.

182. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042489 (Enterobacter hormaechei strain C15 plasmid pC15_001, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtgatgccgcgccc	Protospacer
 ... * ************* * *******.

183. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LT985263 (Escherichia coli strain 511 plasmid RCS54_p, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtgatgccgcgccc	Protospacer
 ... * ************* * *******.

184. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MN540571 (Escherichia coli strain E.coli4feg plasmid pIV_IncHI2_CTX_M_15, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtgatgccgcgccc	Protospacer
 ... * ************* * *******.

185. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033103 (Enterobacter hormaechei strain L51 plasmid pEHZJ1, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtgatgccgcgccc	Protospacer
 ... * ************* * *******.

186. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MH829594 (Enterobacter cloacae strain EC62 plasmid pIMP-4-EC62, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtgatgccgcgccc	Protospacer
 ... * ************* * *******.

187. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MK736669 (Enterobacter cloacae strain EclC2185 plasmid pEclC2185CTXM15, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtgatgccgcgccc	Protospacer
 ... * ************* * *******.

188. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MF156266 (Escherichia coli strain 24-S11 plasmid pCESC2, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtgatgccgcgccc	Protospacer
 ... * ************* * *******.

189. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MG252892 (Enterobacter cloacae strain Encl-922cz plasmid pEncl-922cz, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtaatgccgcgccc	Protospacer
 ... * ************* * *******.

190. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MH399264 (Enterobacter cloacae strain RJ702 plasmid pIMP26, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtgatgccgcgccc	Protospacer
 ... * ************* * *******.

191. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049047 (Enterobacter hormaechei strain Y233 plasmid pIHI2-233, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtgatgccgcgccc	Protospacer
 ... * ************* * *******.

192. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KY887595 (Escherichia coli strain Ec78 plasmid pEc78, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtaatgccgcgccc	Protospacer
 ... * ************* * *******.

193. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KY863418 (Enterobacter asburiae strain AMA 497 plasmid pOXA436, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtgatgccgcgccc	Protospacer
 ... * ************* * *******.

194. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KY978628 (Cronobacter sakazakii strain 505108 plasmid p505108-MDR, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtgatgccgcgccc	Protospacer
 ... * ************* * *******.

195. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MF344582 (Citrobacter freundii strain 525011 plasmid p525011-HI2, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtgatgccgcgccc	Protospacer
 ... * ************* * *******.

196. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MG878867 (Escherichia coli strain Ec21617 plasmid pEc21617-310, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtgatgccgcgccc	Protospacer
 ... * ************* * *******.

197. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP031724 (Enterobacter hormaechei strain WCHEH020038 plasmid pCTXM9_020038, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtgatgccgcgccc	Protospacer
 ... * ************* * *******.

198. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053191 (Enterobacter hormaechei strain EGYMCRVIM plasmid pMS-37a, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtgatgccgcgccc	Protospacer
 ... * ************* * *******.

199. spacer 1.2|955740|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016838 (Salmonella enterica subsp. enterica serovar Senftenberg strain 775W (ATCC 43845) plasmid pSSE-ATCC-43845, complete sequence) position: , mismatch: 10, identity: 0.688

cgaggatagttgtaccaggtcaggccgcgctg	CRISPR spacer
gagacaaagttgtaccaggtaatgccgcgccc	Protospacer
 ... * ************* * *******.

200. spacer 1.5|955923|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to AP018324 (Nostoc sp. HK-01 plasmid plasmid6 DNA, complete genome) position: , mismatch: 10, identity: 0.688

ctggctgtctgcgtgataaatgcagagtgtga	CRISPR spacer
agcaatgtctgcgtgataaaagcaaagttagt	Protospacer
   . *************** ***.***  *

201. spacer 1.12|956350|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP021882 (Sulfuriferula nivalis strain SGTM plasmid SGTM_pl1, complete sequence) position: , mismatch: 10, identity: 0.688

attttttgcggttcaatcagctcataccacag	CRISPR spacer
gttttttgcggttcaataagcacagtatccgc	Protospacer
.**************** *** **   . *.

202. spacer 2.6|973369|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP014579 (Burkholderia sp. RPE67 plasmid p1, complete sequence) position: , mismatch: 10, identity: 0.688

agggctggctgacgcgcaccgagcgccgcaac	CRISPR spacer
gccgctggttcacgcgcaccgagcgctctcgc	Protospacer
.  *****.* ***************. . .*

203. spacer 2.6|973369|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NC_016626 (Burkholderia sp. YI23 plasmid byi_1p, complete sequence) position: , mismatch: 10, identity: 0.688

agggctggctgacgcgcaccgagcgccgcaac	CRISPR spacer
gccgctggttcacgcgcaccgagcgctctcgc	Protospacer
.  *****.* ***************. . .*

204. spacer 2.12|973735|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NC_015727 (Cupriavidus necator N-1 plasmid pBB1, complete sequence) position: , mismatch: 10, identity: 0.688

ttgaggaattcttcccgcaacgcctgtttgtc	CRISPR spacer
aggccgaattcttccagcagcgcctgttctcg	Protospacer
  *  ********** ***.********. .

205. spacer 2.31|974896|32|NZ_CP012344|CRISPRCasFinder,CRT,PILER-CR matches to NC_019957 (Mycobacterium sp. JS623 plasmid pMYCSM01, complete sequence) position: , mismatch: 10, identity: 0.688

cattcgctcaatagcggcccgcgtggcggtga	CRISPR spacer
agcgcgctcaatagcggaccgcgcggcaacgg	Protospacer
 .. ************* *****.***...*.

206. spacer 1.13|956411|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NC_015498 (Glaciecola sp. 4H-3-7+YE-5 plasmid pGLAAG01, complete sequence) position: , mismatch: 11, identity: 0.656

acaaagccaagcgctatatggccggtattttt	CRISPR spacer
tttgtttggagcgctatatgatcggtattttt	Protospacer
 . .  . .***********..**********

207. spacer 2.3|973185|32|NZ_CP012344|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012899 (Burkholderia sp. CCGE1001 plasmid pCCGE1001a, complete sequence) position: , mismatch: 11, identity: 0.656

gccacaatcagatcgaaacgctccggatcacc	CRISPR spacer
accacgatcagatcgaagcgctcccagcttga	Protospacer
.****.***********.****** ....

208. spacer 2.34|975079|32|NZ_CP012344|CRISPRCasFinder,CRT matches to CP054927 (Streptomyces fulvissimus strain NA06532 plasmid unnamed1, complete sequence) position: , mismatch: 11, identity: 0.656

aggggcgttccgcagtcggcaagggctgaaaa	CRISPR spacer
tcgggcatcccgcagtcggcaagggtgcggcg	Protospacer
  ****.*.****************.  .. .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

87386 : 102716

Enterobacteria_phage(75.0%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_023262402.1\|87386_90254_-	intestinal colonization autotransporter adhesin MisL	A0A2L1IV18	Escherichia_phage	1.5e-94	44.3
WP_000984806.1\|90328_90946_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_052894590.1\|92884_95218_-	DNA primase	Q7M2A8	Enterobacteria_phage	0.0e+00	84.8
WP_000743150.1\|95232_95553_-	hypothetical protein	NA	NA	NA	NA
WP_001216598.1\|95549_95777_-	hypothetical protein	NA	NA	NA	NA
WP_023237521.1\|95773_96325_-	ASH family protein	Q7M2A7	Enterobacteria_phage	1.0e-33	71.3
WP_000149860.1\|97127_97865_+	hypothetical protein	Q7M2A2	Enterobacteria_phage	9.0e-81	64.4
WP_000984209.1\|97861_98104_+	transcriptional regulator	Q7M294	Enterobacteria_phage	5.2e-30	77.8
WP_023237522.1\|98120_98687_+	hypothetical protein	Q7M2A1	Enterobacteria_phage	3.1e-57	63.2
WP_071737793.1\|98650_98836_-	hypothetical protein	NA	NA	NA	NA
WP_023262400.1\|98901_99999_-	serine/threonine protein kinase	A0A2I2L4W4	Orpheovirus	9.4e-10	29.0
WP_023237524.1\|100053_101541_-	hypothetical protein	NA	NA	NA	NA
WP_023237525.1\|101537_102716_-	hypothetical protein	Q7M297	Enterobacteria_phage	1.6e-212	94.1

DBSCAN-SWA_2

1146516 : 1211514

Salmonella_phage(91.11%)

head,capsid,plate,tRNA,holin,terminase,tail,integrase,portal

attL 1146354:1146400|attR 1182463:1182509

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1146354:1146400	attL	NA	NA	NA	NA
WP_023237380.1\|1146516_1147707_-	hypothetical protein	E5G6K9	Salmonella_phage	6.7e-102	48.6
WP_023237379.1\|1147730_1148744_-\|integrase	site-specific integrase	E5G6L0	Salmonella_phage	4.4e-187	94.4
WP_023237378.1\|1148746_1149379_-	phage regulatory protein cI	A0A1S6KZZ7	Salmonella_phage	6.3e-59	51.4
WP_000102105.1\|1149500_1149743_+	Rha family transcriptional regulator	A0A1S6KZZ6	Salmonella_phage	6.8e-38	97.5
WP_023237377.1\|1149775_1150285_+	hypothetical protein	E5G6L3	Salmonella_phage	7.8e-84	95.9
WP_023237376.1\|1150292_1150493_+	DUF2724 domain-containing protein	E5G6L4	Salmonella_phage	1.2e-32	97.0
WP_000963473.1\|1150456_1150798_+	hypothetical protein	E5G6L5	Salmonella_phage	4.6e-56	99.1
WP_023237375.1\|1150865_1151099_+	DUF2732 domain-containing protein	E5G6L6	Salmonella_phage	5.4e-32	96.1
WP_023232905.1\|1151098_1151326_+	hypothetical protein	E5G6L7	Salmonella_phage	6.0e-36	97.3
WP_023237374.1\|1151322_1152180_+	retron adenine methylase	E5G6L8	Salmonella_phage	8.6e-160	97.2
WP_023232907.1\|1152176_1154576_+	replication endonuclease	E5G6L9	Salmonella_phage	0.0e+00	95.2
WP_023232908.1\|1154744_1154933_+	hypothetical protein	E5G6M0	Salmonella_phage	9.4e-27	96.8
WP_023232911.1\|1155290_1155710_-	N-acetyltransferase	NA	NA	NA	NA
WP_023232912.1\|1155979_1156363_-	hypothetical protein	NA	NA	NA	NA
WP_023232913.1\|1156564_1156900_-	hypothetical protein	NA	NA	NA	NA
WP_000338835.1\|1157421_1157967_+	hypothetical protein	NA	NA	NA	NA
WP_023237373.1\|1158011_1159052_-\|portal	portal vertex-like protein	A0A1S6KZW5	Salmonella_phage	2.1e-192	95.6
WP_053253387.1\|1159051_1160818_-	oxidoreductase	A0A1S6KZW3	Salmonella_phage	0.0e+00	96.8
WP_000216276.1\|1160960_1161794_+\|capsid	phage capsid protein	E5G6M5	Salmonella_phage	3.1e-130	100.0
WP_023138927.1\|1161810_1162875_+\|capsid	phage capsid protein	A0A1S6KZZ3	Salmonella_phage	2.7e-195	99.4
WP_000059172.1\|1162878_1163529_+\|terminase	terminase endonuclease subunit	A0A1S6KZX1	Salmonella_phage	2.2e-115	100.0
WP_000673535.1\|1163622_1164087_+\|head	head completion/stabilization protein	A0A1S6KZW8	Salmonella_phage	4.2e-84	98.1
WP_023138925.1\|1164086_1164290_+\|tail	phage tail protein	E5G6M9	Salmonella_phage	2.5e-33	98.5
WP_023138924.1\|1164293_1164509_+\|holin	holin family protein	E5G6N0	Salmonella_phage	1.3e-32	98.6
WP_001069919.1\|1164489_1164999_+	lysozyme	A0A1S6KZY9	Salmonella_phage	2.2e-94	98.8
WP_000731036.1\|1165003_1165381_+	hypothetical protein	A0A1S6KZZ2	Salmonella_phage	8.1e-62	100.0
WP_001201940.1\|1165380_1165806_+	hypothetical protein	A0A1S6KZX8	Salmonella_phage	1.1e-67	98.6
WP_001039961.1\|1165901_1166333_+\|tail	tail protein	A0A1S6KZY0	Salmonella_phage	1.1e-75	99.3
WP_023138923.1\|1166325_1166772_+	phage virion morphogenesis protein	A0A1S6L001	Salmonella_phage	1.5e-59	80.4
WP_023138922.1\|1166790_1167882_+	DUF262 domain-containing protein	A0A0R6PKN1	Moraxella_phage	1.4e-18	31.2
WP_023138921.1\|1167904_1168528_+	hypothetical protein	NA	NA	NA	NA
WP_001672413.1\|1168601_1169180_+\|plate	phage baseplate assembly protein V	E5G6N6	Salmonella_phage	1.4e-108	100.0
WP_000177408.1\|1169176_1169536_+\|plate	baseplate assembly protein	A0A1S6KZZ4	Salmonella_phage	6.8e-58	96.6
WP_023138920.1\|1169522_1170431_+\|plate	phage baseplate assembly protein	A0A1S6KZY6	Salmonella_phage	2.2e-158	99.3
WP_023237372.1\|1170423_1171029_+\|tail	phage tail protein I	A0A1S6L000	Salmonella_phage	7.5e-118	98.5
WP_023262363.1\|1171025_1172681_+\|tail	phage tail fiber protein	A0A1S6KZZ8	Salmonella_phage	0.0e+00	98.9
WP_023138916.1\|1172683_1173223_+\|tail	tail fiber assembly protein	A0A1S6KZZ1	Salmonella_phage	6.1e-95	97.2
WP_077908642.1\|1173226_1173844_-\|tail	phage tail protein	A0A1S6KZY8	Salmonella_phage	1.4e-111	98.5
WP_023262362.1\|1173813_1174803_-	hypothetical protein	A0A1S6KZZ0	Salmonella_phage	4.3e-187	95.7
WP_001165558.1\|1174832_1175390_+	recombinase family protein	A0A1S6L009	Salmonella_phage	5.5e-99	98.4
WP_000046109.1\|1175492_1176665_+\|tail	tail sheath protein	A0A1S6KZY7	Salmonella_phage	5.7e-223	99.7
WP_001207653.1\|1176674_1177190_+\|tail	major tail tube protein	E5G6P8	Salmonella_phage	2.7e-92	99.4
WP_001280967.1\|1177244_1177547_+\|tail	phage tail assembly protein	A0A1S6KZZ9	Salmonella_phage	9.4e-45	99.0
WP_000763316.1\|1177561_1177681_+\|tail	GpE family phage tail protein	E5G6Q0	Salmonella_phage	1.8e-15	100.0
WP_023237099.1\|1177673_1180481_+\|tail	phage tail tape measure protein	E5G6Q1	Salmonella_phage	0.0e+00	99.3
WP_023237098.1\|1180477_1180963_+	phage P2 GpU family protein	E5G6Q2	Salmonella_phage	1.9e-71	94.4
WP_023225979.1\|1180959_1182060_+	phage late control D family protein	A0A1S6KZZ5	Salmonella_phage	1.1e-194	98.9
WP_000980499.1\|1182128_1182347_+	hypothetical protein	Q53ZE7	Salmonella_virus	1.0e-37	98.6
WP_072095627.1\|1182898_1184062_-	HlyD family type I secretion periplasmic adaptor subunit	NA	NA	NA	NA
1182463:1182509	attR	NA	NA	NA	NA
WP_023237097.1\|1184069_1186250_-	type I secretion system permease/ATPase	F2Y302	Organic_Lake_phycodnavirus	1.3e-18	34.0
WP_000533846.1\|1186246_1187656_-	TolC family type I secretion outer membrane protein	NA	NA	NA	NA
WP_023237096.1\|1187720_1199195_-	large repetitive protein	NA	NA	NA	NA
WP_001518569.1\|1199808_1200291_-	SsrA-binding protein	W5RAM5	Staphylococcus_phage	5.2e-29	47.4
WP_000242603.1\|1200440_1200917_+	ubiquinone-binding protein	NA	NA	NA	NA
WP_001112990.1\|1200906_1201197_+	RnfH family protein	NA	NA	NA	NA
WP_001203445.1\|1201362_1201701_-	outer membrane protein assembly factor BamE	NA	NA	NA	NA
WP_000880965.1\|1201849_1203511_-	DNA repair protein RecN	NA	NA	NA	NA
WP_001059155.1\|1203596_1204475_-	NAD(+) kinase	NA	NA	NA	NA
WP_001607188.1\|1204406_1204601_+	hypothetical protein	NA	NA	NA	NA
WP_001518875.1\|1204597_1205188_+	nucleotide exchange factor GrpE	NA	NA	NA	NA
WP_001287923.1\|1205222_1205828_-	hypothetical protein	NA	NA	NA	NA
WP_001519447.1\|1205948_1207190_-	membrane protein	NA	NA	NA	NA
WP_001537507.1\|1207254_1208046_-	inner membrane protein YpjD	NA	NA	NA	NA
WP_072073170.1\|1207991_1208288_-	hypothetical protein	NA	NA	NA	NA
WP_000460052.1\|1208211_1209573_+	signal recognition particle protein	NA	NA	NA	NA
WP_000256453.1\|1209886_1210135_+	30S ribosomal protein S16	NA	NA	NA	NA
WP_000043266.1\|1210153_1210702_+	ribosome maturation factor RimM	NA	NA	NA	NA
WP_000469807.1\|1210746_1211514_+\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA

DBSCAN-SWA_3

1474013 : 1516549

Salmonella_phage(49.18%)

lysis,protease,terminase,coat,integrase,portal

attL 1496579:1496595|attR 1515576:1515592

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000716009.1\|1474013_1474952_+\|protease	outer membrane protease PgtE	NA	NA	NA	NA
WP_024149194.1\|1474973_1475204_-	hypothetical protein	C6ZR23	Salmonella_phage	7.5e-10	70.0
WP_053253392.1\|1475213_1475417_-	histidine kinase	I6RSG8	Salmonella_phage	1.0e-31	98.5
WP_023241397.1\|1475513_1476149_-	hypothetical protein	A0A075B8I7	Enterobacteria_phage	9.7e-108	88.6
WP_000002107.1\|1476219_1476504_-	ASCH domain-containing protein	A0A2D1GLL3	Escherichia_phage	1.8e-50	100.0
WP_077944248.1\|1476496_1476949_-	DUF551 domain-containing protein	K7P7E4	Enterobacteria_phage	2.8e-40	54.4
WP_053253394.1\|1477485_1478226_-	hypothetical protein	H6WRY2	Salmonella_phage	1.5e-96	83.6
WP_000267991.1\|1478222_1478516_-	hypothetical protein	A0A1V0E5L2	Salmonella_phage	1.5e-50	100.0
WP_053253395.1\|1478746_1479325_-	hypothetical protein	NA	NA	NA	NA
WP_053253396.1\|1479321_1479543_-	hypothetical protein	S4TVX5	Salmonella_phage	4.1e-13	50.8
WP_053253397.1\|1479539_1480376_-	DNA methyltransferase	Q5QF26	Pseudomonas_virus	2.0e-68	50.7
WP_053253398.1\|1480372_1480603_-	hypothetical protein	Q8HAA4	Salmonella_phage	4.3e-34	98.7
WP_053253399.1\|1480599_1481247_-	hypothetical protein	R9VWB9	Serratia_phage	5.1e-64	54.1
WP_077944241.1\|1481243_1481786_-	Eae-like protein	Q5G8U6	Enterobacteria_phage	7.6e-53	77.2
WP_071827193.1\|1481782_1481953_-	DUF2737 domain-containing protein	I6S642	Salmonella_phage	3.0e-24	98.2
WP_001111312.1\|1481963_1482257_-	hypothetical protein	A0A1R3Y5T7	Salmonella_virus	3.2e-50	100.0
WP_001253476.1\|1482303_1482588_-	sigma-70 family RNA polymerase sigma factor	Q76H41	Enterobacteria_phage	1.4e-45	100.0
WP_053253400.1\|1482587_1483295_-	recombinase	B8K1D9	Salmonella_phage	4.5e-122	89.8
WP_000156731.1\|1483424_1483613_-	hypothetical protein	I6S647	Salmonella_phage	3.7e-31	100.0
WP_010835571.1\|1483593_1483752_-\|protease	protease FtsH-inhibitory lysogeny factor CIII	I6R987	Salmonella_phage	1.8e-23	98.1
WP_023217201.1\|1483836_1484151_-	Superinfection exclusion protein (protein gp17)	E7C9Q4	Salmonella_phage	4.2e-56	100.0
WP_001083253.1\|1484322_1484823_-	HNH endonuclease	A5H1L2	Xanthomonas_virus	5.2e-32	44.5
WP_053253401.1\|1484907_1485168_-	hypothetical protein	NA	NA	NA	NA
WP_053253402.1\|1485437_1485773_-	hypothetical protein	Q5G8T5	Enterobacteria_phage	1.1e-46	87.9
WP_023135942.1\|1486123_1486786_-	hypothetical protein	A0A0M4QWY1	Salmonella_phage	1.7e-126	100.0
WP_000067726.1\|1486904_1487120_+	XRE family transcriptional regulator	A0A0M4RTV8	Salmonella_phage	4.1e-34	100.0
WP_017441422.1\|1487227_1487506_+	transcriptional regulator	A0A220NRS4	Escherichia_phage	6.4e-40	91.3
WP_042827542.1\|1487679_1488513_+	DNA replication protein	A0A1R3Y5R9	Salmonella_virus	1.2e-150	98.9
WP_053253403.1\|1488509_1489886_+	DNA helicase	A0A192Y673	Salmonella_phage	4.8e-253	99.3
WP_023241107.1\|1489959_1490400_+	phage protein NinB	K7PKW7	Enterobacterial_phage	1.0e-79	98.6
WP_001629218.1\|1490396_1491269_+	phage NinC	I6R0S6	Salmonella_phage	6.7e-168	93.1
WP_000679699.1\|1491265_1491439_+	hypothetical protein	C6ZR56	Salmonella_phage	7.0e-29	93.0
WP_042837728.1\|1491405_1491582_+	NinE family protein	I6RSI9	Salmonella_phage	1.7e-25	96.6
WP_042837729.1\|1491578_1491755_+	NinF family protein	A0A0M4S6T3	Salmonella_phage	3.0e-27	94.8
WP_001750247.1\|1491717_1492014_+	hypothetical protein	A0A0M3ULJ7	Salmonella_phage	2.0e-47	100.0
WP_001539188.1\|1492010_1492406_+	hypothetical protein	A0A0M4REJ2	Salmonella_phage	3.4e-71	98.5
WP_000149926.1\|1492402_1492606_+	protein ninH	Q5G8R8	Enterobacteria_phage	7.2e-33	100.0
WP_000219135.1\|1492586_1492766_+	hypothetical protein	A0A1V0E5I7	Salmonella_phage	7.1e-24	98.3
WP_042837730.1\|1492762_1493386_+	antitermination protein	K7PM87	Enterobacteria_phage	6.8e-114	99.5
WP_071883505.1\|1493526_1493709_-	hypothetical protein	A0A088CPS7	Enterobacteria_phage	3.8e-25	94.9
WP_000286100.1\|1493822_1494026_+	hypothetical protein	I6R0S9	Salmonella_phage	1.1e-33	100.0
WP_053253515.1\|1494003_1494501_+	lysozyme	A0A1R3Y5W5	Salmonella_virus	9.3e-90	97.6
WP_053253516.1\|1494589_1495027_+\|lysis	lysis protein	K7P710	Enterobacteria_phage	1.4e-70	95.9
WP_000877024.1\|1495230_1495761_+	hypothetical protein	B8K1H1	Salmonella_phage	3.4e-90	95.5
WP_017441429.1\|1495948_1496329_+	hypothetical protein	Q716B1	Shigella_phage	1.0e-64	97.6
WP_000807788.1\|1496432_1496675_+	hypothetical protein	A5VW77	Enterobacteria_phage	1.3e-36	100.0
1496579:1496595	attL	NA	NA	NA	NA
WP_053253404.1\|1496676_1496856_+	hypothetical protein	A0A2H4A350	Salmonella_phage	1.1e-24	98.3
WP_023235274.1\|1496879_1497368_+	DNA packaging protein gp3 (Terminase small subunit)	A0A0M3ULC0	Salmonella_phage	5.0e-88	99.4
WP_053253405.1\|1497345_1498845_+\|terminase	terminase	G5DA96	Enterobacteria_phage	1.5e-305	99.4
WP_053253406.1\|1498845_1501011_+\|portal	portal protein	A0A2D1GLJ6	Escherichia_phage	0.0e+00	99.3
WP_053253407.1\|1501024_1501936_+	scaffolding protein	A0A2D1GLN7	Escherichia_phage	7.8e-159	98.7
WP_001196946.1\|1501935_1503231_+\|coat	coat protein	A0A2D1GLV2	Escherichia_phage	9.4e-243	99.3
WP_023235276.1\|1503275_1503512_+	hypothetical protein	A0A2D1GLK1	Escherichia_phage	1.1e-24	78.4
WP_053253408.1\|1503489_1503990_+	recombinase RmuC	G8EYJ2	Enterobacteria_phage	5.5e-90	98.2
WP_053253409.1\|1503990_1505409_+	hypothetical protein	A0A2D1GM00	Escherichia_phage	5.6e-273	98.1
WP_053253410.1\|1505412_1506051_+	hypothetical protein	A8CGD2	Salmonella_phage	3.1e-90	99.5
WP_053253411.1\|1506050_1506506_+	hypothetical protein	Q76H16	Enterobacteria_phage	3.3e-86	98.0
WP_053253412.1\|1506508_1507198_+	hypothetical protein	A0A1R3Y5P8	Salmonella_virus	2.9e-89	98.7
WP_053253517.1\|1507240_1508542_+	DNA transfer protein	A0A220NR03	Salmonella_phage	5.6e-235	98.2
WP_053253413.1\|1508541_1510434_+	hypothetical protein	E7C9U6	Salmonella_phage	7.8e-246	79.0
WP_023198770.1\|1510451_1510781_-	hypothetical protein	NA	NA	NA	NA
WP_023241086.1\|1511020_1512772_+	hypothetical protein	I6S5Y0	Salmonella_phage	3.0e-58	87.5
WP_053253414.1\|1512835_1514089_-	acyltransferase	A0A2H4JA46	uncultured_Caudovirales_phage	5.2e-20	25.8
WP_053253415.1\|1514124_1515294_-\|integrase	integrase	I6R0M2	Salmonella_phage	1.0e-227	99.2
WP_001590337.1\|1515607_1516549_-	transporter protein	E7DYY8	Enterobacteria_phage	4.1e-147	87.8
1515576:1515592	attR	NA	NA	NA	NA

DBSCAN-SWA_4

1917924 : 1928527

Morganella_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001219015.1\|1917924_1918398_-	peptidase	A0A0F6TJ61	Escherichia_coli_O157_typing_phage	7.1e-39	77.6
WP_001669246.1\|1919045_1919336_-	DUF4102 domain-containing protein	B7SYF8	Stenotrophomonas_phage	5.2e-08	49.1
WP_000598920.1\|1919707_1920505_-	protein MtfA	NA	NA	NA	NA
WP_071786941.1\|1920765_1921008_+	hypothetical protein	NA	NA	NA	NA
WP_000500831.1\|1920985_1921147_+	hypothetical protein	NA	NA	NA	NA
WP_000394197.1\|1921273_1921693_+	DNA polymerase V subunit UmuD	A0A1W6JNS2	Morganella_phage	8.5e-36	60.5
WP_000457665.1\|1921695_1922964_+	translesion error-prone DNA polymerase V subunit UmuC	I6RSM4	Salmonella_phage	4.2e-227	92.2
WP_000208509.1\|1923418_1923631_+	cold-shock protein CspJ	A0A1W6JNX5	Morganella_phage	3.9e-21	70.0
WP_024131109.1\|1923641_1923830_+	hypothetical protein	NA	NA	NA	NA
WP_023237033.1\|1924090_1925287_-	porin OmpS1	Q1MVN1	Enterobacteria_phage	6.1e-111	56.3
WP_000107435.1\|1925936_1926248_+	hypothetical protein	NA	NA	NA	NA
WP_000377053.1\|1926327_1927023_+	phosphohydrolase	A0A1D6Y7U0	Golden_Marseillevirus	9.5e-08	27.7
WP_001157317.1\|1927096_1928527_+	DNA cytosine methyltransferase	E5E3X6	Burkholderia_phage	7.8e-105	57.4

DBSCAN-SWA_5

2837426 : 2896541

Salmonella_phage(72.22%)

lysis,holin,terminase,tail,integrase,protease

attL 2853648:2853662|attR 2896576:2896590

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_023262235.1\|2837426_2839187_+\|protease	Lon protease family protein	NA	NA	NA	NA
WP_000227928.1\|2839255_2839774_+	beta-hydroxydecanoyl-ACP dehydratase	NA	NA	NA	NA
WP_001537784.1\|2839873_2840041_-	ribosome modulation factor	NA	NA	NA	NA
WP_000759136.1\|2840296_2840860_-	hypothetical protein	NA	NA	NA	NA
WP_000433416.1\|2840856_2842497_-	paraquat-inducible protein B	NA	NA	NA	NA
WP_000333152.1\|2842501_2843755_-	paraquat-inducible protein A	NA	NA	NA	NA
WP_000053044.1\|2843769_2845677_-	ABC transporter ATP-binding protein	A0A2K9L3Z8	Tupanvirus	2.4e-53	29.8
WP_001086485.1\|2845689_2847798_-	ribosomal RNA large subunit methyltransferase K/L	NA	NA	NA	NA
WP_000224073.1\|2847896_2849006_+	hypothetical protein	NA	NA	NA	NA
WP_001220671.1\|2849002_2849545_-	cell division protein ZapC	NA	NA	NA	NA
WP_000291723.1\|2849710_2850721_-	dihydroorotate dehydrogenase (quinone)	NA	NA	NA	NA
WP_023237069.1\|2850928_2853541_-	aminopeptidase N	A0A0P0IY26	Acinetobacter_phage	4.8e-20	22.6
2853648:2853662	attL	NA	NA	NA	NA
WP_000497440.1\|2853967_2854174_+	DNA-damage-inducible protein I	S4TNM0	Salmonella_phage	1.8e-31	100.0
WP_001842495.1\|2854649_2855450_+	hypothetical protein	NA	NA	NA	NA
WP_077944242.1\|2855478_2855667_-	hypothetical protein	S4TTF2	Salmonella_phage	1.1e-08	90.9
WP_058107135.1\|2855840_2856041_+	PagK	NA	NA	NA	NA
WP_052944290.1\|2856137_2856716_-\|tail	tail fiber assembly protein	A0A0M4RTP2	Salmonella_phage	9.8e-91	86.8
WP_071883498.1\|2856715_2858245_-	hypothetical protein	A0A1B0VFW4	Salmonella_phage	4.0e-83	86.6
WP_023209956.1\|2858244_2858925_-	DUF2612 domain-containing protein	A0A0M5M1K4	Salmonella_phage	1.1e-128	98.7
WP_023209957.1\|2858921_2860121_-	bacteriophage protein	A0A0M4RD32	Salmonella_phage	6.5e-214	97.5
WP_053253430.1\|2860121_2860475_-	hypothetical protein	A0A0M4R339	Salmonella_phage	7.9e-59	96.6
WP_023209958.1\|2860474_2861230_-	bacteriophage protein	A0A0M5M1K7	Salmonella_phage	1.0e-127	92.4
WP_023209960.1\|2861465_2861996_-	hypothetical protein	NA	NA	NA	NA
WP_023209961.1\|2862002_2862350_-	hypothetical protein	A0A0M4RTY3	Salmonella_phage	6.8e-23	69.2
WP_023209962.1\|2862346_2863420_-	hypothetical protein	A0A0M4QX01	Salmonella_phage	1.6e-187	93.2
WP_023209963.1\|2863422_2863725_-	hypothetical protein	A0A0M4R5B7	Salmonella_phage	1.6e-52	99.0
WP_000353826.1\|2863724_2864300_-	hypothetical protein	A0A0M3ULD5	Salmonella_phage	2.4e-97	100.0
WP_053253431.1\|2864299_2866309_-	lytic transglycosylase	A0A0M4REK7	Salmonella_phage	0.0e+00	99.1
WP_024131618.1\|2866298_2866475_-	hypothetical protein	A0A2H4J1A2	uncultured_Caudovirales_phage	4.7e-12	72.9
WP_001669124.1\|2866486_2866939_-	hypothetical protein	A0A0M4S6U8	Salmonella_phage	3.2e-65	81.3
WP_023209965.1\|2866942_2867383_-	DUF3277 domain-containing protein	A0A2H4J619	uncultured_Caudovirales_phage	4.6e-56	74.0
WP_053253432.1\|2867394_2868540_-	DUF3383 domain-containing protein	A0A2H4J8G4	uncultured_Caudovirales_phage	1.0e-163	75.1
WP_053253433.1\|2868543_2869089_-	hypothetical protein	A0A2H4J1A0	uncultured_Caudovirales_phage	1.8e-49	53.0
WP_053253434.1\|2869081_2869486_-	hypothetical protein	A0A2H4J1A4	uncultured_Caudovirales_phage	1.2e-42	69.2
WP_053253435.1\|2869485_2869995_-	hypothetical protein	A0A2H4J488	uncultured_Caudovirales_phage	3.8e-22	40.7
WP_053253436.1\|2869991_2870402_-	DUF4054 domain-containing protein	A0A2H4J1A6	uncultured_Caudovirales_phage	2.0e-29	51.9
WP_053253437.1\|2870370_2870739_-	hypothetical protein	NA	NA	NA	NA
WP_047602436.1\|2870788_2871736_-	DUF2184 domain-containing protein	A0A0M3ULD3	Salmonella_phage	6.1e-98	54.2
WP_053253438.1\|2871747_2872251_-	hypothetical protein	A0A0M4QWZ6	Salmonella_phage	1.2e-31	46.1
WP_047602440.1\|2872262_2873540_-	DUF2213 domain-containing protein	A0A0M4R5A6	Salmonella_phage	7.2e-78	42.8
WP_053253439.1\|2873550_2874084_-	hypothetical protein	A0A0M4REK0	Salmonella_phage	8.8e-46	54.0
WP_053253440.1\|2874160_2875624_-	hypothetical protein	A0A0M4S6U1	Salmonella_phage	6.4e-155	55.9
WP_053253441.1\|2875664_2877083_-\|terminase	PBSX family phage terminase large subunit	A0A077KAW0	Edwardsiella_phage	2.0e-185	69.2
WP_053253442.1\|2877048_2877801_-	hypothetical protein	G8C7P2	Escherichia_phage	5.3e-12	73.3
WP_053253443.1\|2877902_2878163_-	hypothetical protein	NA	NA	NA	NA
WP_053253518.1\|2878410_2878860_-\|lysis	lysis protein	A0A0M4RD57	Salmonella_phage	1.9e-65	91.8
WP_000984583.1\|2878877_2879330_-	lysozyme	A0A0M4R365	Salmonella_phage	4.6e-80	98.7
WP_001574216.1\|2879313_2879643_-\|holin	phage holin, lambda family	A0A0M3ULK9	Salmonella_phage	5.8e-56	100.0
WP_001141973.1\|2879918_2880605_+\|protease	type III secretion system effector protease GtgA	Q9MBM0	Phage_Gifsy-2	2.1e-132	100.0
WP_000798705.1\|2880965_2881415_+	hypothetical protein	NA	NA	NA	NA
WP_001534733.1\|2881550_2881676_-	hypothetical protein	NA	NA	NA	NA
WP_053253444.1\|2881849_2882167_-	hypothetical protein	NA	NA	NA	NA
WP_001047630.1\|2882233_2883031_-	antitermination protein	A0A0M4S661	Salmonella_phage	4.0e-151	99.6
WP_001617856.1\|2883020_2883167_-	hypothetical protein	A0A0M5M7B2	Salmonella_phage	4.3e-19	97.9
WP_046593564.1\|2883163_2883775_-	recombination protein NinG	A0A0M4RU10	Salmonella_phage	3.0e-90	97.5
WP_001241022.1\|2883777_2883984_-	hypothetical protein	S4TNP0	Salmonella_phage	4.6e-35	98.5
WP_000929790.1\|2883983_2884586_-	hypothetical protein	S4TTI0	Salmonella_phage	7.5e-110	99.5
WP_014343878.1\|2884620_2884869_-	hypothetical protein	A0A0U2C0C8	Salmonella_phage	1.6e-42	100.0
WP_001217669.1\|2884985_2885219_-	DinI family protein	H6WRY5	Salmonella_phage	5.6e-37	100.0
WP_000788825.1\|2885693_2886395_-	hypothetical protein	A0A0M3ULE2	Salmonella_phage	8.4e-129	99.6
WP_000024046.1\|2886391_2887297_-	hypothetical protein	A0A0M5M7Y1	Salmonella_phage	9.1e-176	99.7
WP_077944243.1\|2887388_2887763_-	hypothetical protein	S4TTD7	Salmonella_phage	3.3e-63	99.2
WP_000145711.1\|2887728_2887956_-	Rha family transcriptional regulator	K7PKS2	Enterobacteria_phage	1.5e-34	95.9
WP_053253445.1\|2887969_2888437_+	transcriptional regulator	K7PHG0	Enterobacteria_phage	4.2e-68	86.5
WP_000439725.1\|2888479_2888905_+	hypothetical protein	NA	NA	NA	NA
WP_000091280.1\|2888906_2889341_+	hypothetical protein	NA	NA	NA	NA
WP_000438989.1\|2889367_2889574_-	hypothetical protein	K7P7I0	Enterobacteria_phage	9.6e-17	69.1
WP_053253446.1\|2889970_2890129_+	hypothetical protein	H6WRX3	Salmonella_phage	4.5e-22	96.2
WP_022742800.1\|2890150_2890501_+	hypothetical protein	S4TSN6	Salmonella_phage	6.4e-61	98.3
WP_053253447.1\|2890627_2893513_+	exodeoxyribonuclease	H6WRX1	Salmonella_phage	0.0e+00	97.4
WP_077944244.1\|2893475_2894633_+	enterohemolysin	S4TTE8	Salmonella_phage	8.8e-216	99.2
WP_001237031.1\|2894675_2894915_+	DUF4060 domain-containing protein	S4TR31	Salmonella_phage	2.0e-37	100.0
WP_000065276.1\|2894955_2895204_+	excisionase	S4TND0	Salmonella_phage	4.7e-42	100.0
WP_001528853.1\|2895200_2896541_+\|integrase	integrase	S4TSP2	Salmonella_phage	7.2e-262	100.0
2896576:2896590	attR	NA	NA	NA	NA

DBSCAN-SWA_6

3187396 : 3207707

Cronobacter_phage(70.59%)

head,capsid,lysis,holin,terminase,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_053253519.1\|3187396_3189037_-	hypothetical protein	F1BUJ7	Cronobacter_phage	6.2e-98	37.9
WP_053253454.1\|3189068_3189632_-	hypothetical protein	F1BUJ9	Cronobacter_phage	5.7e-27	40.9
WP_053253520.1\|3189594_3190275_-	hypothetical protein	NA	NA	NA	NA
WP_077944246.1\|3191401_3193474_-	hypothetical protein	F1BUK3	Cronobacter_phage	4.3e-56	42.4
WP_053253456.1\|3193442_3194015_-	hypothetical protein	F1BUK5	Cronobacter_phage	1.3e-55	54.2
WP_053253457.1\|3194007_3195186_-	hypothetical protein	F1BUK6	Cronobacter_phage	1.3e-137	61.3
WP_053253458.1\|3195175_3195514_-	DUF2590 domain-containing protein	F1BUK8	Cronobacter_phage	2.4e-28	59.0
WP_053253459.1\|3195517_3197599_-\|tail	phage tail protein	Q94MY4	Haemophilus_virus	7.6e-101	47.8
WP_053253460.1\|3197786_3198059_-	hypothetical protein	A5X9I7	Aeromonas_virus	2.3e-18	58.5
WP_053253461.1\|3198112_3198577_-\|lysis	lysis protein	A0A2L1IV55	Escherichia_phage	3.2e-20	42.5
WP_053253462.1\|3198573_3199020_-	lysozyme	A0A075B8L0	Enterobacteria_phage	5.7e-46	65.3
WP_053253463.1\|3199016_3199355_-\|holin	phage holin, lambda family	NA	NA	NA	NA
WP_053253464.1\|3199363_3199825_-	DUF2597 domain-containing protein	A0A0U3TH58	Pseudomonas_phage	8.7e-42	56.2
WP_053253465.1\|3199828_3201016_-	DUF2586 domain-containing protein	F1BUL5	Cronobacter_phage	1.5e-98	50.5
WP_053253466.1\|3201019_3201751_-	hypothetical protein	F1BUL6	Cronobacter_phage	3.3e-43	42.0
WP_053253467.1\|3201747_3202227_-	hypothetical protein	NA	NA	NA	NA
WP_053253468.1\|3202223_3202694_-\|head	phage head completion protein	F1BUL8	Cronobacter_phage	1.6e-27	50.7
WP_053253469.1\|3202799_3203501_-\|terminase	terminase	F1BUM0	Cronobacter_phage	1.3e-44	42.5
WP_053253470.1\|3203512_3204577_-\|capsid	phage major capsid protein, P2 family	F1BUM2	Cronobacter_phage	1.1e-76	48.0
WP_053253471.1\|3205883_3207707_+	hypothetical protein	F1BUM5	Cronobacter_phage	8.5e-173	52.6

DBSCAN-SWA_7

4379002 : 4423935

Burkholderia_phage(40.91%)

tail,plate,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001182233.1\|4379002_4380001_-\|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	NA	NA	NA	NA
WP_001039335.1\|4380088_4381399_-	conjugative transfer protein	NA	NA	NA	NA
WP_000416271.1\|4381645_4382161_+	transcriptional regulator Zur	NA	NA	NA	NA
WP_000981150.1\|4382260_4382473_-	CsbD family protein	NA	NA	NA	NA
WP_010989093.1\|4382491_4382605_-	hypothetical protein	NA	NA	NA	NA
WP_001128116.1\|4382601_4383927_-	MATE family efflux transporter	NA	NA	NA	NA
WP_000646079.1\|4384105_4384714_-	LexA repressor	Q9G0C2	Lactococcus_phage	1.0e-13	38.0
WP_000002900.1\|4384822_4385191_-	diacylglycerol kinase	NA	NA	NA	NA
WP_000017360.1\|4385361_4387782_+	glycerol-3-phosphate 1-O-acyltransferase	NA	NA	NA	NA
WP_000455249.1\|4387880_4388753_-	4-hydroxybenzoate octaprenyltransferase	NA	NA	NA	NA
WP_000019230.1\|4388766_4389264_-	chorismate--pyruvate lyase	NA	NA	NA	NA
WP_000782497.1\|4389444_4390362_-	maltose operon protein MalM	NA	NA	NA	NA
WP_000973644.1\|4390525_4391884_-	maltoporin	NA	NA	NA	NA
WP_000179176.1\|4391972_4393082_-	maltose/maltodextrin import ATP-binding protein MalK	Q6GZ03	Mycoplasma_phage	6.2e-17	47.2
WP_000695415.1\|4393443_4394634_+	maltose/maltodextrin ABC transporter substrate-binding protein MalE	NA	NA	NA	NA
WP_000382570.1\|4394765_4396310_+	maltose ABC transporter permease MalF	NA	NA	NA	NA
WP_001252081.1\|4396324_4397215_+	maltose ABC transporter permease	NA	NA	NA	NA
WP_000982752.1\|4397380_4397791_-	phosphate-starvation-inducible protein PsiE	NA	NA	NA	NA
WP_023236909.1\|4397933_4400030_-	YjbH domain-containing protein	NA	NA	NA	NA
WP_023236910.1\|4400029_4400767_-	hypothetical protein	NA	NA	NA	NA
WP_000824803.1\|4400763_4401402_-	YjbF family lipoprotein	NA	NA	NA	NA
WP_000976742.1\|4401465_4401711_-	hypothetical protein	NA	NA	NA	NA
WP_023236911.1\|4402151_4403801_-	glucose-6-phosphate isomerase	NA	NA	NA	NA
WP_023236912.1\|4404145_4405495_+	lysine-sensitive aspartokinase 3	NA	NA	NA	NA
WP_000615248.1\|4405625_4405973_-	DNA-binding protein	Q6QIE8	Burkholderia_phage	4.9e-21	51.5
WP_001226439.1\|4406547_4406835_+	membrane protein	Q6QIC8	Burkholderia_phage	3.0e-16	48.1
WP_020437576.1\|4406837_4407443_+	phage lysin	Q5ZQZ1	Pseudomonas_phage	1.4e-60	59.9
WP_000777268.1\|4407455_4407770_+	hypothetical protein	Q6QIC4	Burkholderia_phage	4.9e-20	49.1
WP_000875313.1\|4408380_4408578_+	hypothetical protein	Q6QIB1	Burkholderia_phage	5.1e-07	52.9
WP_023236915.1\|4408567_4409995_+\|tail	phage tail sheath family protein	A4JWK5	Burkholderia_virus	3.4e-193	70.5
WP_023138088.1\|4409994_4410519_+\|tail	phage major tail tube protein	Q6QIA9	Burkholderia_phage	6.2e-68	69.0
WP_053253499.1\|4410570_4410888_+\|tail	phage tail assembly protein	NA	NA	NA	NA
WP_001185654.1\|4410847_4410976_+\|tail	GpE family phage tail protein	NA	NA	NA	NA
WP_053253500.1\|4411072_4413427_+\|tail	phage tail tape measure protein	A4JWL0	Burkholderia_virus	2.9e-64	30.3
WP_023236917.1\|4413426_4414380_+	methyl-accepting chemotaxis protein	A4JWL1	Burkholderia_virus	7.9e-37	51.5
WP_001269717.1\|4414379_4414589_+	membrane protein	A4JWL2	Burkholderia_virus	9.8e-17	60.3
WP_023236918.1\|4414576_4415620_+	hypothetical protein	Q6QIA2	Burkholderia_phage	1.5e-76	45.3
WP_023236919.1\|4415629_4416352_+\|plate	phage baseplate assembly protein V	A0A067ZIM2	Vibrio_phage	5.1e-12	41.0
WP_071786937.1\|4416360_4416603_+	hypothetical protein	NA	NA	NA	NA
WP_000593184.1\|4416678_4417041_+	GtrA family protein	U5P0S6	Shigella_phage	9.6e-44	70.8
WP_000703628.1\|4417037_4417967_+	glycosyltransferase	S5FKN0	Shigella_phage	7.9e-151	84.1
WP_023236920.1\|4417966_4419514_+	hypothetical protein	B9UDL6	Salmonella_phage	8.5e-49	29.9
WP_001093501.1\|4419677_4420037_+\|plate	baseplate protein	Q6QIA0	Burkholderia_phage	2.8e-35	64.2
WP_000951725.1\|4420027_4421143_+\|plate	baseplate protein	Q6QI99	Burkholderia_phage	6.9e-101	52.2
WP_000359503.1\|4421135_4421768_+\|tail	phage tail protein I	Q6QI98	Burkholderia_phage	1.1e-23	56.4
WP_023236921.1\|4421770_4423231_+\|tail	tail fiber domain-containing protein	A0A0M3ULH6	Salmonella_phage	2.0e-76	38.8
WP_000493812.1\|4423233_4423935_+	DUF4376 domain-containing protein	X2KPE1	Enterobacteria_phage	2.1e-23	38.6

DBSCAN-SWA_8

4571695 : 4608198

Escherichia_phage(40.0%)

head,plate,capsid,holin,terminase,tail,integrase,portal

attL 4571538:4571584|attR 4603573:4603619

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
4571538:4571584	attL	NA	NA	NA	NA
WP_001218608.1\|4571695_4571950_-	transcriptional regulator	M1SNR2	Escherichia_phage	1.3e-44	100.0
WP_000882949.1\|4571995_4573159_-	late control protein D	U5N3V4	Enterobacteria_phage	7.0e-205	99.2
WP_000978885.1\|4573158_4573638_-\|tail	tail assembly protein	O64315	Escherichia_phage	1.5e-84	99.4
WP_000785970.1\|4576091_4576211_-\|tail	GpE family phage tail protein	A0A0F7LCR6	Escherichia_phage	1.0e-15	100.0
WP_001031303.1\|4576243_4576519_-\|tail	phage tail assembly protein	A0A0F7LDQ8	Escherichia_phage	5.7e-41	100.0
WP_001251408.1\|4576575_4577094_-\|tail	major tail tube protein	A0A0F7LDZ1	Escherichia_phage	1.4e-93	100.0
WP_001286720.1\|4577106_4578297_-\|tail	tail sheath protein	A0A0F7LBW9	Escherichia_phage	4.8e-225	99.5
WP_077944247.1\|4579787_4580405_+\|tail	tail fiber assembly protein	A0A1S6KZY8	Salmonella_phage	7.2e-108	94.4
WP_053253502.1\|4580408_4580948_-\|tail	tail fiber assembly protein	A0A1S6KZZ1	Salmonella_phage	8.8e-86	88.8
WP_053253503.1\|4580950_4582495_-\|tail	phage tail protein	A0A1S6KZZ8	Salmonella_phage	4.4e-154	50.1
WP_053253504.1\|4582491_4583103_-\|tail	phage tail protein I	A0A0F7LA36	Escherichia_phage	5.4e-116	99.0
WP_001121478.1\|4583095_4584004_-\|plate	baseplate assembly protein	Q858V6	Yersinia_virus	8.8e-163	100.0
WP_000127163.1\|4584008_4584356_-\|plate	baseplate assembly protein	A0A0F7L9X3	Escherichia_phage	1.7e-58	100.0
WP_001093737.1\|4584352_4584988_-\|plate	phage baseplate assembly protein V	U5N3F0	Enterobacteria_phage	9.0e-114	99.1
WP_001001780.1\|4585054_4585507_-	phage virion morphogenesis protein	A0A0F7LBV9	Escherichia_phage	6.3e-77	100.0
WP_053253505.1\|4585499_4585967_-\|tail	phage tail protein	A0A0F7LA33	Escherichia_phage	1.5e-81	98.1
WP_001440152.1\|4585929_4586103_-	hypothetical protein	Q7Y4E1	Escherichia_virus	2.3e-24	96.5
WP_053253506.1\|4586074_4586500_-	protein lysB	U5N3W5	Enterobacteria_phage	1.4e-65	95.7
WP_000736607.1\|4586487_4586913_-	hypothetical protein	U5N096	Enterobacteria_phage	2.8e-58	95.7
WP_053253507.1\|4586927_4587425_-	lysozyme	A0A0F7LBS0	Escherichia_phage	1.5e-92	99.4
WP_000123124.1\|4587424_4587706_-\|holin	holin	A0A0F7LDF8	Escherichia_phage	3.7e-43	100.0
WP_000846399.1\|4587709_4587913_-\|tail	tail protein X	U5N3E7	Enterobacteria_phage	4.0e-31	100.0
WP_000988633.1\|4587912_4588422_-\|head	head completion/stabilization protein	U5N0S3	Enterobacteria_phage	1.1e-90	100.0
WP_053253508.1\|4588521_4589265_-\|terminase	terminase	U5N091	Enterobacteria_phage	9.5e-123	96.8
WP_001248559.1\|4589268_4590342_-\|capsid	phage capsid protein	Q94MD1	Enterobacteria_phage	5.1e-202	100.0
WP_001085976.1\|4590400_4591255_-\|capsid	capsid scaffolding protein	Q94MI4	Enterobacteria_phage	9.0e-133	96.5
WP_052908765.1\|4591428_4593201_+	oxidoreductase	A0A0F7LCK3	Escherichia_phage	0.0e+00	99.7
WP_000038161.1\|4593200_4594235_+\|portal	phage portal protein	A0A0F7LDI7	Escherichia_phage	1.9e-201	100.0
WP_024160514.1\|4594661_4595726_+	hypothetical protein	NA	NA	NA	NA
WP_001398851.1\|4595722_4596835_+	hypothetical protein	NA	NA	NA	NA
WP_053253509.1\|4596846_4597518_+	hypothetical protein	NA	NA	NA	NA
WP_053253510.1\|4597678_4599958_-	replication endonuclease	A0A0F7LBQ2	Escherichia_phage	0.0e+00	98.0
WP_000027664.1\|4599947_4600223_-	hypothetical protein	U5N3W1	Enterobacteria_phage	3.8e-45	100.0
WP_001113264.1\|4600219_4600444_-	hypothetical protein	S4TRY6	Salmonella_phage	2.9e-35	100.0
WP_001277958.1\|4600443_4600746_-	hypothetical protein	U5N0U2	Enterobacteria_phage	5.0e-46	98.0
WP_053253511.1\|4600745_4600970_-	DUF2732 domain-containing protein	S4TP68	Salmonella_phage	4.4e-31	95.9
WP_053253512.1\|4601033_4601534_-	hypothetical protein	M1SV55	Escherichia_phage	5.9e-92	99.4
WP_001308179.1\|4601703_4601976_-	hypothetical protein	Q1JS36	Enterobacteria_phage	1.4e-47	100.0
WP_000777029.1\|4602112_4602406_+	transcriptional regulator	Q1JS37	Enterobacteria_phage	2.7e-49	100.0
WP_000985246.1\|4602475_4603456_+\|integrase	integrase	S4TP66	Salmonella_phage	4.7e-186	100.0
WP_001233463.1\|4603641_4604142_-	repressor CpxP	NA	NA	NA	NA
4603573:4603619	attR	NA	NA	NA	NA
WP_001033731.1\|4604292_4604991_+	DNA-binding response regulator	Q6XM27	Feldmannia_irregularis_virus	5.3e-06	30.3
WP_000580402.1\|4604987_4606361_+	two-component system sensor histidine kinase CpxA	W8CYF6	Bacillus_phage	7.2e-15	25.6
WP_000133441.1\|4606411_4606807_-	nuclear transport factor 2 family protein	NA	NA	NA	NA
WP_077910795.1\|4606818_4607571_-	MOSC domain-containing protein	NA	NA	NA	NA
WP_023237330.1\|4607577_4608198_-	superoxide dismutase [Mn]	Q56AR7	Bacillus_thuringiensis_phage	3.2e-63	58.9

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP012345

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

84617 : 92323

Sodalis_phage(16.67%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000728920.1\|84617_85559_-\|transposase	ISNCY family transposase	Q2A0A7	Sodalis_phage	1.4e-73	55.0
WP_000427676.1\|85973_87179_+	ParA family protein	A0A077SL49	Escherichia_phage	1.5e-162	69.3
WP_001541561.1\|87175_88153_+	chromosome partitioning protein ParB	A0A1B0V750	Salmonella_phage	5.2e-84	53.2
WP_053253578.1\|88234_89509_-	DNA polymerase V subunit UmuC	F1C5A5	Cronobacter_phage	6.6e-156	64.2
WP_053253579.1\|89508_89931_-	peptidase	A0A1W6JNS2	Morganella_phage	1.7e-28	51.6
WP_077944255.1\|90441_90912_+	hypothetical protein	NA	NA	NA	NA
WP_000088645.1\|91642_92323_+	DNA methylase	A0A2I7RE86	Vibrio_phage	1.6e-28	36.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP012344

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP012345

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection