CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP007534	Salmonella enterica subsp. enterica serovar Abony str. 0014 strain ATCC 6017 chromosome, complete genome	3 crisprs	WYL,PD-DExK,cas3,DEDDh,DinG,csa3	0	5	10	0

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP007534_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP007534_1

170538-170688

Orphan

I-E

Consensus_repeat	Method
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRISPRCasFinder
CGGTTTATCCCCGCTGGCGCGGGGAACAC	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP007534_1

>merge|NZ_CP007534|1|170538-170688|CRISPRCasFinder,PILER-CR
GTGTTTATCCCCGCTGACGCGGGGAACATTTTTCAGCCCTTGTCGACTGCGGAACGCCCCTCGGTTTATCCCCGCTGGCGCGGGGAACACTGTGAAAGCGCTAACCGGATATCTCCTTTGTCCGGTTTATCCCCGCTGGCGCGGGAAACAC

>NZ_CP007534|1|1|170538-170688|CRISPRCasFinder
GTGTTTATCCCCGCTGACGCGGGGAACAT	TTTTCAGCCCTTGTCGACTGCGGAACGCCCCT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGTGAAAGCGCTAACCGGATATCTCCTTTGTC
CGGTTTATCCCCGCTGGCGCGGGAAACAC

>NZ_CP007534|1|1|170540-170688|PILER-CR
GTTTATCCCCGCTGACGCGGGGAACATTT	TTCAGCCCTTGTCGACTGCGGAACGCCCCTCG
GTTTATCCCCGCTGGCGCGGGGAACACTG	TGAAAGCGCTAACCGGATATCTCCTTTGTCCG
GTTTATCCCCGCTGGCGCGGGAAACAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP007534.1\|WP_023204595.1\|172841_173795_+\|SPI-1-type-III-secretion-system-effector-SopD	unknown	unknown	gnl\|CDD\|185277
NZ_CP007534.1\|WP_001219244.1\|164192_164672_-\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851
NZ_CP007534.1\|WP_000490481.1\|169476_170523_+\|aminopeptidase	unknown	unknown	gnl\|CDD\|182299
NZ_CP007534.1\|WP_001118109.1\|165902_166259_-\|DUF3561-family-protein	unknown	unknown	gnl\|CDD\|371891
NZ_CP007534.1\|WP_001199961.1\|180702_181374_-\|7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|275126
NZ_CP007534.1\|WP_000134246.1\|163146_164196_-\|tRNA-pseudouridine(13)-synthase-TruD	unknown	unknown	gnl\|CDD\|234884
NZ_CP007534.1\|WP_023244867.1\|166868_168308_-\|sulfate-adenylyltransferase-subunit-CysN	unknown	unknown	gnl\|CDD\|235349
NZ_CP007534.1\|WP_000108313.1\|178664_179027_+\|6-carboxytetrahydropterin-synthase-QueD	unknown	unknown	gnl\|CDD\|238264
NZ_CP007534.1\|WP_023244870.1\|176430_178230_-\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	unknown	unknown	gnl\|CDD\|182862
NZ_CP007534.1\|WP_023195548.1\|179116_179914_-\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|224158
NZ_CP007534.1\|WP_000039870.1\|173882_174617_-\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NZ_CP007534.1\|WP_000517480.1\|165400_165712_-\|cell-division-protein-FtsB	unknown	unknown	gnl\|CDD\|179156
NZ_CP007534.1\|WP_001221537.1\|162404_163166_-\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732
NZ_CP007534.1\|WP_000210451.1\|184755_185556_-\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
NZ_CP007534.1\|WP_001173663.1\|166276_166882_-\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|179661
NZ_CP007534.1\|WP_000372384.1\|168317_169226_-\|sulfate-adenylyltransferase-subunit-CysD	unknown	unknown	gnl\|CDD\|235375
NZ_CP007534.1\|WP_023244869.1\|174718_176431_-\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	unknown	unknown	gnl\|CDD\|237402
NZ_CP007534.1\|WP_000036734.1\|181509_182808_-\|phosphopyruvate-hydratase	unknown	unknown	gnl\|CDD\|234617
NZ_CP007534.1\|WP_000210861.1\|182890_184528_-\|CTP-synthase-(glutamine-hydrolyzing)	unknown	unknown	gnl\|CDD\|235437
NZ_CP007534.1\|WP_020839118.1\|164671_165382_-\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670

Protein	Function_ID	Function_description	E-value
NZ_CP007534.1\|WP_023204595.1\|172841_173795_+\|SPI-1-type-III-secretion-system-effector-SopD	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0
NZ_CP007534.1\|WP_001219244.1\|164192_164672_-\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	1.27909e-104
NZ_CP007534.1\|WP_000490481.1\|169476_170523_+\|aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
NZ_CP007534.1\|WP_001118109.1\|165902_166259_-\|DUF3561-family-protein	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	4.85353e-49
NZ_CP007534.1\|WP_001199961.1\|180702_181374_-\|7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	1.43874e-155
NZ_CP007534.1\|WP_000134246.1\|163146_164196_-\|tRNA-pseudouridine(13)-synthase-TruD	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
NZ_CP007534.1\|WP_023244867.1\|166868_168308_-\|sulfate-adenylyltransferase-subunit-CysN	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
NZ_CP007534.1\|WP_000108313.1\|178664_179027_+\|6-carboxytetrahydropterin-synthase-QueD	gnl\|CDD\|238264	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS). Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids, as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after uptake by a carrier-mediated active transport system. Most microbes and plants lack this system and must synthesize folates de novo from guanosine triphosphate. One enzyme from this pathway is PTPS which catalyzes the conversion of dihydroneopterin triphosphate to 6-pyruvoyl tetrahydropterin. The functional enzyme is a hexamer of identical subunits.	2.78454e-58
NZ_CP007534.1\|WP_023244870.1\|176430_178230_-\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	gnl\|CDD\|182862	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit.	0
NZ_CP007534.1\|WP_023195548.1\|179116_179914_-\|MBL-fold-metallo-hydrolase	gnl\|CDD\|224158	COG1237, COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only].	4.40529e-102
NZ_CP007534.1\|WP_000039870.1\|173882_174617_-\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	7.73232e-139
NZ_CP007534.1\|WP_000517480.1\|165400_165712_-\|cell-division-protein-FtsB	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	1.08865e-64
NZ_CP007534.1\|WP_001221537.1\|162404_163166_-\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	7.64916e-147
NZ_CP007534.1\|WP_000210451.1\|184755_185556_-\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	3.42454e-158
NZ_CP007534.1\|WP_001173663.1\|166276_166882_-\|adenylyl-sulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	4.61291e-146
NZ_CP007534.1\|WP_000372384.1\|168317_169226_-\|sulfate-adenylyltransferase-subunit-CysD	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
NZ_CP007534.1\|WP_023244869.1\|174718_176431_-\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0
NZ_CP007534.1\|WP_000036734.1\|181509_182808_-\|phosphopyruvate-hydratase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
NZ_CP007534.1\|WP_000210861.1\|182890_184528_-\|CTP-synthase-(glutamine-hydrolyzing)	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
NZ_CP007534.1\|WP_020839118.1\|164671_165382_-\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	1.27466e-119

>NZ_CP007534.1|WP_000490481.1|169476_170523_+|aminopeptidase
MFSATRRFAVILALGVGFILPAQAASPGPGEIANTQARHIATFFPGRMTGSPAEMLSADYLRQQFTQMGYQSDIRTFNSRFIYTTKDNRKNWHNVTGSTVIAAHEGRVPQQIIIMAHLDTYAPQSDADVDANLGGLTLQGMDDNAAGLGVMLELAARLKDIPTHYGIRFIATSGEEEGKLGAENLLKRMSDAEKKNTLLVINLDNLIVGDKLYFNSGKNTPEAVRTLTRDRALAIARRYGIAANTNPGRNPSYPKGTGCCNDAEVFDKAGISVLSVEATNWNLGKKDGYQQRVKNASFPNGNSWHDVRLDNQQHIDKALPGRIERRSRDVVRIMLPLVKELAKAEKTS
>NZ_CP007534.1|WP_000372384.1|168317_169226_-|sulfate-adenylyltransferase-subunit-CysD
MDQKRLTHLRQLEAESIHIIREVAAEFANPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYAFRDRTANAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWRNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMVDDDRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESHAQTLPEIIEEMLVSTTSERQGRMIDRDQAGSMELKKRQGYF
>NZ_CP007534.1|WP_023244867.1|166868_168308_-|sulfate-adenylyltransferase-subunit-CysN
MNTILAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTLQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYREETFARIREDYLTFAEQLPGDLDIRFVPLSALEGDNVAAQSANMRWYSGPTLLEVLETVDVQRAVDRQPMRFPVQYVNRPNLDFRGYAGTLASGSVKVGERIKVLPSGVESSVARIVTFDGDKEEACAGEAITLVLNDDIDISRGDLLLAANETLAPARHAAIDVVWMAEQPLAPGQSYDVKLAGKKTRARIEAIRYQIDINNLTQRDVESLPLNGIGLVEMTFDEPLALDIYQQNPVTGGLIFIDRLSNVTVGAGMVRELDERGATPSVEYSAFELELNALVRRHFPHWDARDLLGDKHGAA
>NZ_CP007534.1|WP_001173663.1|166276_166882_-|adenylyl-sulfate-kinase
MALHDENVVWHSHPVTVAAREQLHGHRGVVLWFTGLSGSGKSTVAGALEEALHQRGVSTYLLDGDNVRHGLCRDLGFSDADRQENIRRVGEVASLMADAGLIVLTAFISPHRAERQLVKERVGHDRFIEIYVNTPLAICEQRDPKGLYKKARAGELRNFTGIDAIYEAPDSPQVHLNGEQLVTNLVSQLLDLLRRRDIIRS
>NZ_CP007534.1|WP_001118109.1|165902_166259_-|DUF3561-family-protein
MPGMVKVTGFNMRNSHNITFTRSDAFMVDDDATSAFPGAVVGFVSWLLALGIPFLLYGPNTLFFFLYTWPFFLALMPVSVIIGIALHLLVKGKILFSIMFTLLAVGALFGALFIWLLG
>NZ_CP007534.1|WP_000517480.1|165400_165712_-|cell-division-protein-FtsB
MGKLTLLLLALLVWLQYSLWFGKNGIHDYSRVNDDVVAQQATNAKLKARNDQLFAEIDDLNGGQEAIEERARNELSMTKPGETFYRLVPDASKRAATAGQTHR
>NZ_CP007534.1|WP_020839118.1|164671_165382_-|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MAATLLDVCAVVPAAGFGRRMQTECPKQYLSIGNKTILEHSVHALLAHPRVTRVVIAISPGDHRFAQLPLANHPQITVVDGGNERADSVLAGLQAVAEAQWVLVHDAARPCLHQDDLARLLAISENSRVGGILASPVRDTMKRGEPGKNAIAHTVERADLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPALVEGRADNIKVTRPEDLALAEFYLTRTIHQEKA
>NZ_CP007534.1|WP_001219244.1|164192_164672_-|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLMKAAK
>NZ_CP007534.1|WP_000134246.1|163146_164196_-|tRNA-pseudouridine(13)-synthase-TruD
MTEFDNLTWLHGKPQGSGLLKANPEDFVVVEDLGFTPDGEGEHILLRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDFSAFQLEGCKVLEYARHKRKLRLGALKGNAFTLVLREISDRRDVETRLQAIRDGGVPNYFGAQRFGIGGSNLQGALRWAQSNAPVRDRNKRSFWLSAARSALFNQIVHQRLKKPDFNQVVDGDALQLAGRGSWFVATSEELPELQRRVDEKELMITASLPGSGEWGTQRAALAFEQDAIAQETVLQSLLLREKVEASRRAMLLYPQQLSWNWWDDVTVELRFWLPAGSFATSVVRELINTMGDYAHIAE
>NZ_CP007534.1|WP_001221537.1|162404_163166_-|5'/3'-nucleotidase-SurE
MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFDNGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLNGYQHYDTAAAVTCALLRGLSREPLRTGRILNVNVPDLPLAQIKGIRVTRCGSRHPADKVIPQEDPRGNTLYWIGPPGDKYDAGPDTDFAAVDEGYVSVTPLHVDLTAHSAHDVVSDWLDSVGVGTQW
>NZ_CP007534.1|WP_023204595.1|172841_173795_+|SPI-1-type-III-secretion-system-effector-SopD
MPVTLSFGNHQNYTLNESRLAHLLSADKEKAIHMGGWDKVQDHFRAEKKDHALEVLHSIIHGQGRGEPGEMEVNIEDINKIYAFKRLQHLACPAHQDLFTIKLDASQTQFLLMVGDTVISQSNIKDILNISDDAVIESMSREERQLFLQICEVIGAKMTWHPELLQESISTLRKEVTGNAQIKAAVYEMMRPAEAPDHPLVEWQDSLTEDEKSMLACINAGNFEPTTQFCKIGYQEVQGEVAFSMMHPCISYLLHTYSPFAEFKPTNSGFLKKLNQDYNDYHAKKMFIDVILEKLYLTHERSLHIGKDGCSRNILLT
>NZ_CP007534.1|WP_000039870.1|173882_174617_-|phosphoadenosine-phosphosulfate-reductase
MSKLDLNALNELPKVDRVLALAETNAQLETLTAEERVAWALENLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNEINKVEPMNRALKELKAQTWFAGLRREQSGSRAHLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>NZ_CP007534.1|WP_023244869.1|174718_176431_-|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit
MSEKHPGPLVVEGKLSDAERMKLESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAAQKLEPRHAMLLRCRLPGGVITTTQWQAIDKFAADNTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGATYLPRKFKTTVVIPPQNDIDLHANDMNFVAIVENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGFLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGVDTFKEEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDNNWHLTLFIENGRILDYPGRPLKTGLLEIAKIHKGDFRITANQNLIIASVPESQKAKIEKLARDHGLMNAVKPQRENSMACVSFPTCPLAMAEAERFLPSFTDKVEAILEKHGIPDEHIVMRVTGCPNGCGRAMLAELGLVGKAPGRYNVHLGGNRMGTRIPRMYRENITESEILDSVDELVGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDFWE
>NZ_CP007534.1|WP_023244870.1|176430_178230_-|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit
MTTPAPLTGLLPLNPEQLARLQAATTDLTPEQLAWVSGYFWGVLNPRSGAVAVTPAPEGKMPGITLISASQTGNARRVAEALRDDLLAANLNVTLVNAGDYKFKQIASEKLLVIVTSTQGEGEPPEEAVALHKFLFSKKAPKLENTAFAVFSLGDTSYEFFCQSGKDFDSKLAELGGERLLDRVDADVEYQAAASEWRARVVDVLKSRAPVAAPSQSVATGAVNDIHTSPYTKDAPLTATLSVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKELVELLWLKGDEPVTVDGKTLPLAEALEWHFELTVNTANIVENYATLTRSEALLPLVGDKAQLQHYAATTPIVDMVRFSPAQLDAQALIDLLRPLTPRLYSIASSQAETENEVHVTVGVVRYDIEGRARAGGASSFLADRVEEEGEVRVFIEHNDNFRLPANPQTPVIMIGPGTGIAPFRAFMQQRAAEGVEGKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLSRIDLAWSRDQKEKIYVQDKLREQGAELWRWINDGAHIYVCGDARRMAADVEKALLEVIAEFGGMDLESADEYLSELRVERRYQRDVY
>NZ_CP007534.1|WP_000108313.1|178664_179027_+|6-carboxytetrahydropterin-synthase-QueD
MSTTLYKDFTFEAAHRLPHVPEGHKCGRLHGHSFMVRLEITGEVDPHTGWIMDFADLKAAFKPTYDRLDHYYLNDIPGLSNPTSEVLAKWIWDQVKPVVPLLSAVMVKETCTAGCVYRGE
>NZ_CP007534.1|WP_023195548.1|179116_179914_-|MBL-fold-metallo-hydrolase
MALRIRVLLENHKGAGADKSLKARPGLSLLVEDESTSILFDTGPDGSFMQNALAMGIDLSDVSAVVLSHGHYDHCGGVPWLPDNSRIICHPDIARERYAAMTFLGITRKIKKLSCEVDYSRYRMMYTRDPLPIGENFIWSGEIPVVAPEAYGIFGGHDAEPDSILDEGVLIYQSTKGLVIITGCGHRGIANIVRHCQNITGIKQIYALVGGFHLRCASPFTLWRVRRFLQEHKPEKLCGCHCTGAWGRLWLPEITAPATGDVLRF
>NZ_CP007534.1|WP_001199961.1|180702_181374_-|7-carboxy-7-deazaguanine-synthase-QueE
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWDKLSDREVSLFSILAKTKESDKWGAASSEDLLAVINRQGYTARHVVITGGEPCIHDLMPLTDLLEKSGFSCQIETSGTHEVRCTPNTWVTVSPKVNMRGGYDVLSQALERANEIKHPVGRVRDIEALDELLATLSDDKPRVIALQPISQKEDATRLCIETCIARNWRLSMQTHKYLNIA
>NZ_CP007534.1|WP_000036734.1|181509_182808_-|phosphopyruvate-hydratase
MSKIVKVIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVGAVNGPIAQAILGKDAKDQAGIDKIMIDLDGTENKSNFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKGKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>NZ_CP007534.1|WP_000210861.1|182890_184528_-|CTP-synthase-(glutamine-hydrolyzing)
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQLAVDIGREHALFMHLTLVPYLAAAGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISMKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIYEEANPAGEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVTVNIKLIDSQDVETRGVEILKDLDAILIPGGFGYRGVEGKIATARYARENNIPYLGICLGMQVALIEFARNVAGMDNANSTEFVPDCKYPVVALITEWRDEDGNVEVRSEKSDLGGTMRLGAQQCQLSDDSLVRQLYGAPTIVERHRHRYEVNNMLLKQIEAAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAANEHQKRQAK
>NZ_CP007534.1|WP_000210451.1|184755_185556_-|nucleoside-triphosphate-pyrophosphohydrolase
MTTNHQIDRLLTLMQRLRDPENGCPWDKEQTFASIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFGELSADNSEEALVRWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCSNVGFDWTTLGPVVDKVYEEIDEVMFEARQAVVDQAKLEEEMGDLLFATVNMARHLGTKAELALQKANDKFERRFREVERIVAARGLEMTGVDLETMEEVWQEVKRQEIDL

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP007534_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP007534_2

180012-180406

Orphan

I-E

Consensus_repeat	Method
CGGTTTATCCCCGCTGGCGCGGGGAAC	CRISPRCasFinder
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	PILER-CR

6 spacers

The CRISPR arrays of NZ_CP007534_2

>merge|NZ_CP007534|2|180012-180406|CRISPRCasFinder,CRT,PILER-CR
ACGGCTATCCCCGCTGACGCGGGGAACACCTGCTCAGCGATAACCGGCAGGTTTAGCCGCTCGGTTTATCCCCGCTGACGCGGGGAACACTTGCCGACCAGATCAATGACAACGCTAACCTTCGGTTTATCCCCGCTGGCGCGGGGAACACAGAACTCCCCGGATCATGTATGGGGTAACGTCCGGTTTATCCCCGCTGGCGCGGGGAACGCCGGTAGGTGAACGGTTTTTATCGTGGGATGAGCGGTTTATCCCCGCTGGCGCGGGGAACACTTCTCGCATTCCCTGCGATACCACTCATCATCCGGTTTATCCCCGCTGGCGCGGGGAACACTGTGGCCGGAATAGCTCGCGCATCATTGCCCGCGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP007534|2|2|180012-180404|CRISPRCasFinder
ACGGCTATCCCCGCTGACGCGGGGAAC	ACCTGCTCAGCGATAACCGGCAGGTTTAGCCGCT
CGGTTTATCCCCGCTGACGCGGGGAAC	ACTTGCCGACCAGATCAATGACAACGCTAACCTT
CGGTTTATCCCCGCTGGCGCGGGGAAC	ACAGAACTCCCCGGATCATGTATGGGGTAACGTC
CGGTTTATCCCCGCTGGCGCGGGGAAC	GCCGGTAGGTGAACGGTTTTTATCGTGGGATGAG
CGGTTTATCCCCGCTGGCGCGGGGAAC	ACTTCTCGCATTCCCTGCGATACCACTCATCATC
CGGTTTATCCCCGCTGGCGCGGGGAAC	ACTGTGGCCGGAATAGCTCGCGCATCATTGCCCG
CGGTTTATCCCCGCTGGCGCGGGGAAC

>NZ_CP007534|2|1|180012-180406|CRT
ACGGCTATCCCCGCTGACGCGGGGAACAC	CTGCTCAGCGATAACCGGCAGGTTTAGCCGCT
CGGTTTATCCCCGCTGACGCGGGGAACAC	TTGCCGACCAGATCAATGACAACGCTAACCTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGAACTCCCCGGATCATGTATGGGGTAACGTC
CGGTTTATCCCCGCTGGCGCGGGGAACGC	CGGTAGGTGAACGGTTTTTATCGTGGGATGAG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTCTCGCATTCCCTGCGATACCACTCATCATC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGTGGCCGGAATAGCTCGCGCATCATTGCCCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP007534|2|2|180073-180406|PILER-CR
CGGTTTATCCCCGCTGACGCGGGGAACAC	TTGCCGACCAGATCAATGACAACGCTAACCTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGAACTCCCCGGATCATGTATGGGGTAACGTC
CGGTTTATCCCCGCTGGCGCGGGGAACGC	CGGTAGGTGAACGGTTTTTATCGTGGGATGAG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTCTCGCATTCCCTGCGATACCACTCATCATC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGTGGCCGGAATAGCTCGCGCATCATTGCCCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP007534.1\|WP_023204595.1\|172841_173795_+\|SPI-1-type-III-secretion-system-effector-SopD	unknown	unknown	gnl\|CDD\|185277
NZ_CP007534.1\|WP_001199961.1\|180702_181374_-\|7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|275126
NZ_CP007534.1\|WP_000490481.1\|169476_170523_+\|aminopeptidase	unknown	unknown	gnl\|CDD\|182299
NZ_CP007534.1\|WP_023244871.1\|186159_186747_+\|fimbrial-protein	unknown	unknown	gnl\|CDD\|185169
NZ_CP007534.1\|WP_023244873.1\|190331_190838_+\|fimbrial-protein	unknown	unknown	gnl\|CDD\|185178
NZ_CP007534.1\|WP_023195548.1\|179116_179914_-\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|224158
NZ_CP007534.1\|WP_000108313.1\|178664_179027_+\|6-carboxytetrahydropterin-synthase-QueD	unknown	unknown	gnl\|CDD\|238264
NZ_CP007534.1\|WP_023244870.1\|176430_178230_-\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	unknown	unknown	gnl\|CDD\|182862
NZ_CP007534.1\|WP_000039870.1\|173882_174617_-\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NZ_CP007534.1\|WP_001044460.1\|189538_190312_+\|fimbria/pilus-periplasmic-chaperone	unknown	unknown	gnl\|CDD\|185177
NZ_CP007534.1\|WP_000210451.1\|184755_185556_-\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
NZ_CP007534.1\|WP_001173663.1\|166276_166882_-\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|179661
NZ_CP007534.1\|WP_001079646.1\|191319_191856_+\|fimbrial-protein	unknown	unknown	gnl\|CDD\|185168
NZ_CP007534.1\|WP_000372384.1\|168317_169226_-\|sulfate-adenylyltransferase-subunit-CysD	unknown	unknown	gnl\|CDD\|235375
NZ_CP007534.1\|WP_023244869.1\|174718_176431_-\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	unknown	unknown	gnl\|CDD\|237402
NZ_CP007534.1\|WP_023244867.1\|166868_168308_-\|sulfate-adenylyltransferase-subunit-CysN	unknown	unknown	gnl\|CDD\|235349
NZ_CP007534.1\|WP_000036734.1\|181509_182808_-\|phosphopyruvate-hydratase	unknown	unknown	gnl\|CDD\|234617
NZ_CP007534.1\|WP_000210861.1\|182890_184528_-\|CTP-synthase-(glutamine-hydrolyzing)	unknown	unknown	gnl\|CDD\|235437
NZ_CP007534.1\|WP_000832396.1\|190852_191323_+\|fimbrial-protein	unknown	unknown	gnl\|CDD\|185179
NZ_CP007534.1\|WP_077914336.1\|186826_189526_+\|fimbrial-biogenesis-outer-membrane-usher-protein	unknown	unknown	gnl\|CDD\|185176

Protein	Function_ID	Function_description	E-value
NZ_CP007534.1\|WP_023204595.1\|172841_173795_+\|SPI-1-type-III-secretion-system-effector-SopD	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0
NZ_CP007534.1\|WP_001199961.1\|180702_181374_-\|7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	1.43874e-155
NZ_CP007534.1\|WP_000490481.1\|169476_170523_+\|aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
NZ_CP007534.1\|WP_023244871.1\|186159_186747_+\|fimbrial-protein	gnl\|CDD\|185169	PRK15261, PRK15261, fimbrial protein SteA; Provisional.	1.64855e-99
NZ_CP007534.1\|WP_023244873.1\|190331_190838_+\|fimbrial-protein	gnl\|CDD\|185178	PRK15275, PRK15275, putative fimbrial protein SteD; Provisional.	1.18308e-103
NZ_CP007534.1\|WP_023195548.1\|179116_179914_-\|MBL-fold-metallo-hydrolase	gnl\|CDD\|224158	COG1237, COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only].	4.40529e-102
NZ_CP007534.1\|WP_000108313.1\|178664_179027_+\|6-carboxytetrahydropterin-synthase-QueD	gnl\|CDD\|238264	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS). Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids, as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after uptake by a carrier-mediated active transport system. Most microbes and plants lack this system and must synthesize folates de novo from guanosine triphosphate. One enzyme from this pathway is PTPS which catalyzes the conversion of dihydroneopterin triphosphate to 6-pyruvoyl tetrahydropterin. The functional enzyme is a hexamer of identical subunits.	2.78454e-58
NZ_CP007534.1\|WP_023244870.1\|176430_178230_-\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	gnl\|CDD\|182862	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit.	0
NZ_CP007534.1\|WP_000039870.1\|173882_174617_-\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	7.73232e-139
NZ_CP007534.1\|WP_001044460.1\|189538_190312_+\|fimbria/pilus-periplasmic-chaperone	gnl\|CDD\|185177	PRK15274, PRK15274, putative periplasmic fimbrial chaperone protein SteC; Provisional.	0
NZ_CP007534.1\|WP_000210451.1\|184755_185556_-\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	3.42454e-158
NZ_CP007534.1\|WP_001173663.1\|166276_166882_-\|adenylyl-sulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	4.61291e-146
NZ_CP007534.1\|WP_001079646.1\|191319_191856_+\|fimbrial-protein	gnl\|CDD\|185168	PRK15260, PRK15260, fimbrial protein SteF; Provisional.	7.785e-121
NZ_CP007534.1\|WP_000372384.1\|168317_169226_-\|sulfate-adenylyltransferase-subunit-CysD	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
NZ_CP007534.1\|WP_023244869.1\|174718_176431_-\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0
NZ_CP007534.1\|WP_023244867.1\|166868_168308_-\|sulfate-adenylyltransferase-subunit-CysN	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
NZ_CP007534.1\|WP_000036734.1\|181509_182808_-\|phosphopyruvate-hydratase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
NZ_CP007534.1\|WP_000210861.1\|182890_184528_-\|CTP-synthase-(glutamine-hydrolyzing)	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
NZ_CP007534.1\|WP_000832396.1\|190852_191323_+\|fimbrial-protein	gnl\|CDD\|185179	PRK15276, PRK15276, putative fimbrial subunit SteE; Provisional.	1.41178e-100
NZ_CP007534.1\|WP_077914336.1\|186826_189526_+\|fimbrial-biogenesis-outer-membrane-usher-protein	gnl\|CDD\|185176	PRK15273, PRK15273, fimbrial biogenesis outer membrane usher protein.	0

>NZ_CP007534.1|WP_023195548.1|179116_179914_-|MBL-fold-metallo-hydrolase
MALRIRVLLENHKGAGADKSLKARPGLSLLVEDESTSILFDTGPDGSFMQNALAMGIDLSDVSAVVLSHGHYDHCGGVPWLPDNSRIICHPDIARERYAAMTFLGITRKIKKLSCEVDYSRYRMMYTRDPLPIGENFIWSGEIPVVAPEAYGIFGGHDAEPDSILDEGVLIYQSTKGLVIITGCGHRGIANIVRHCQNITGIKQIYALVGGFHLRCASPFTLWRVRRFLQEHKPEKLCGCHCTGAWGRLWLPEITAPATGDVLRF
>NZ_CP007534.1|WP_000108313.1|178664_179027_+|6-carboxytetrahydropterin-synthase-QueD
MSTTLYKDFTFEAAHRLPHVPEGHKCGRLHGHSFMVRLEITGEVDPHTGWIMDFADLKAAFKPTYDRLDHYYLNDIPGLSNPTSEVLAKWIWDQVKPVVPLLSAVMVKETCTAGCVYRGE
>NZ_CP007534.1|WP_023244870.1|176430_178230_-|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit
MTTPAPLTGLLPLNPEQLARLQAATTDLTPEQLAWVSGYFWGVLNPRSGAVAVTPAPEGKMPGITLISASQTGNARRVAEALRDDLLAANLNVTLVNAGDYKFKQIASEKLLVIVTSTQGEGEPPEEAVALHKFLFSKKAPKLENTAFAVFSLGDTSYEFFCQSGKDFDSKLAELGGERLLDRVDADVEYQAAASEWRARVVDVLKSRAPVAAPSQSVATGAVNDIHTSPYTKDAPLTATLSVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKELVELLWLKGDEPVTVDGKTLPLAEALEWHFELTVNTANIVENYATLTRSEALLPLVGDKAQLQHYAATTPIVDMVRFSPAQLDAQALIDLLRPLTPRLYSIASSQAETENEVHVTVGVVRYDIEGRARAGGASSFLADRVEEEGEVRVFIEHNDNFRLPANPQTPVIMIGPGTGIAPFRAFMQQRAAEGVEGKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLSRIDLAWSRDQKEKIYVQDKLREQGAELWRWINDGAHIYVCGDARRMAADVEKALLEVIAEFGGMDLESADEYLSELRVERRYQRDVY
>NZ_CP007534.1|WP_023244869.1|174718_176431_-|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit
MSEKHPGPLVVEGKLSDAERMKLESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAAQKLEPRHAMLLRCRLPGGVITTTQWQAIDKFAADNTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGATYLPRKFKTTVVIPPQNDIDLHANDMNFVAIVENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGFLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGVDTFKEEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDNNWHLTLFIENGRILDYPGRPLKTGLLEIAKIHKGDFRITANQNLIIASVPESQKAKIEKLARDHGLMNAVKPQRENSMACVSFPTCPLAMAEAERFLPSFTDKVEAILEKHGIPDEHIVMRVTGCPNGCGRAMLAELGLVGKAPGRYNVHLGGNRMGTRIPRMYRENITESEILDSVDELVGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDFWE
>NZ_CP007534.1|WP_000039870.1|173882_174617_-|phosphoadenosine-phosphosulfate-reductase
MSKLDLNALNELPKVDRVLALAETNAQLETLTAEERVAWALENLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNEINKVEPMNRALKELKAQTWFAGLRREQSGSRAHLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>NZ_CP007534.1|WP_023204595.1|172841_173795_+|SPI-1-type-III-secretion-system-effector-SopD
MPVTLSFGNHQNYTLNESRLAHLLSADKEKAIHMGGWDKVQDHFRAEKKDHALEVLHSIIHGQGRGEPGEMEVNIEDINKIYAFKRLQHLACPAHQDLFTIKLDASQTQFLLMVGDTVISQSNIKDILNISDDAVIESMSREERQLFLQICEVIGAKMTWHPELLQESISTLRKEVTGNAQIKAAVYEMMRPAEAPDHPLVEWQDSLTEDEKSMLACINAGNFEPTTQFCKIGYQEVQGEVAFSMMHPCISYLLHTYSPFAEFKPTNSGFLKKLNQDYNDYHAKKMFIDVILEKLYLTHERSLHIGKDGCSRNILLT
>NZ_CP007534.1|WP_000490481.1|169476_170523_+|aminopeptidase
MFSATRRFAVILALGVGFILPAQAASPGPGEIANTQARHIATFFPGRMTGSPAEMLSADYLRQQFTQMGYQSDIRTFNSRFIYTTKDNRKNWHNVTGSTVIAAHEGRVPQQIIIMAHLDTYAPQSDADVDANLGGLTLQGMDDNAAGLGVMLELAARLKDIPTHYGIRFIATSGEEEGKLGAENLLKRMSDAEKKNTLLVINLDNLIVGDKLYFNSGKNTPEAVRTLTRDRALAIARRYGIAANTNPGRNPSYPKGTGCCNDAEVFDKAGISVLSVEATNWNLGKKDGYQQRVKNASFPNGNSWHDVRLDNQQHIDKALPGRIERRSRDVVRIMLPLVKELAKAEKTS
>NZ_CP007534.1|WP_000372384.1|168317_169226_-|sulfate-adenylyltransferase-subunit-CysD
MDQKRLTHLRQLEAESIHIIREVAAEFANPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYAFRDRTANAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWRNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMVDDDRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESHAQTLPEIIEEMLVSTTSERQGRMIDRDQAGSMELKKRQGYF
>NZ_CP007534.1|WP_023244867.1|166868_168308_-|sulfate-adenylyltransferase-subunit-CysN
MNTILAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTLQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYREETFARIREDYLTFAEQLPGDLDIRFVPLSALEGDNVAAQSANMRWYSGPTLLEVLETVDVQRAVDRQPMRFPVQYVNRPNLDFRGYAGTLASGSVKVGERIKVLPSGVESSVARIVTFDGDKEEACAGEAITLVLNDDIDISRGDLLLAANETLAPARHAAIDVVWMAEQPLAPGQSYDVKLAGKKTRARIEAIRYQIDINNLTQRDVESLPLNGIGLVEMTFDEPLALDIYQQNPVTGGLIFIDRLSNVTVGAGMVRELDERGATPSVEYSAFELELNALVRRHFPHWDARDLLGDKHGAA
>NZ_CP007534.1|WP_001173663.1|166276_166882_-|adenylyl-sulfate-kinase
MALHDENVVWHSHPVTVAAREQLHGHRGVVLWFTGLSGSGKSTVAGALEEALHQRGVSTYLLDGDNVRHGLCRDLGFSDADRQENIRRVGEVASLMADAGLIVLTAFISPHRAERQLVKERVGHDRFIEIYVNTPLAICEQRDPKGLYKKARAGELRNFTGIDAIYEAPDSPQVHLNGEQLVTNLVSQLLDLLRRRDIIRS
>NZ_CP007534.1|WP_001199961.1|180702_181374_-|7-carboxy-7-deazaguanine-synthase-QueE
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWDKLSDREVSLFSILAKTKESDKWGAASSEDLLAVINRQGYTARHVVITGGEPCIHDLMPLTDLLEKSGFSCQIETSGTHEVRCTPNTWVTVSPKVNMRGGYDVLSQALERANEIKHPVGRVRDIEALDELLATLSDDKPRVIALQPISQKEDATRLCIETCIARNWRLSMQTHKYLNIA
>NZ_CP007534.1|WP_000036734.1|181509_182808_-|phosphopyruvate-hydratase
MSKIVKVIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVGAVNGPIAQAILGKDAKDQAGIDKIMIDLDGTENKSNFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKGKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>NZ_CP007534.1|WP_000210861.1|182890_184528_-|CTP-synthase-(glutamine-hydrolyzing)
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQLAVDIGREHALFMHLTLVPYLAAAGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISMKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIYEEANPAGEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVTVNIKLIDSQDVETRGVEILKDLDAILIPGGFGYRGVEGKIATARYARENNIPYLGICLGMQVALIEFARNVAGMDNANSTEFVPDCKYPVVALITEWRDEDGNVEVRSEKSDLGGTMRLGAQQCQLSDDSLVRQLYGAPTIVERHRHRYEVNNMLLKQIEAAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAANEHQKRQAK
>NZ_CP007534.1|WP_000210451.1|184755_185556_-|nucleoside-triphosphate-pyrophosphohydrolase
MTTNHQIDRLLTLMQRLRDPENGCPWDKEQTFASIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFGELSADNSEEALVRWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCSNVGFDWTTLGPVVDKVYEEIDEVMFEARQAVVDQAKLEEEMGDLLFATVNMARHLGTKAELALQKANDKFERRFREVERIVAARGLEMTGVDLETMEEVWQEVKRQEIDL
>NZ_CP007534.1|WP_023244871.1|186159_186747_+|fimbrial-protein
MKSSHFCKLAVTASLVMGIVSGAQAAGSNTAKVTFLGNIVDSPCSVTLDTEDQTVNMGSSIGNGTLSNGKTTINNARTFHIDLEGCTWATEKNMNVVFTTGSGTTAATGATDNLALMKTDGTGAISNVSLAIGDAGKNNIKLGYTYTQAIADLDGDTILDEKQSLNFTAWLVGAATGTVGTGEFSSAANVTISYL
>NZ_CP007534.1|WP_077914336.1|186826_189526_+|fimbrial-biogenesis-outer-membrane-usher-protein
MMNNTWKSVLCPIACGVGMLLSASPYSASGKDIEFNTDFLDVKNRDNVNIAQFSRKGFILPGVYLLQIKINGQTLPQEFPVNWVIPEHDPQGSEVCAEPELVTQLGIKPELAEKLVWITHGERQCLAPDSLKGMDFQADLGHSTLLVNLPQAYMEYSDVDWDPPARWDNGITGIILDYNINNQLRHDQESGSEEQSISGNGTLGANLGAWRLRADWQASYDHRDDDENTSTLHDQSWSRYYAYRALPTLGAKLTLGESYLQSDVFDSFNYIGASVISDDQMLPPKLRGYAPEIVGIARSNAKVKVSWQGRVLYETQVPAGPFRIQDLNQSVSGTLHVTVEEQNGQTQEFDVNTASVPFLTRPGMVRYKMALGRPQDWDHHPITGTFASAEASWGVTNGWSLYGGAIGESNYQAVALGSGKDLGVVGAVAVDITHSIAHMPQDDGFDGETLQGNSYRISYSRDFDEIDSRLTFAGYRFSEKNFMSMSDYLDAKTYHHLNAGHEKERYTVTYNQNFREQGMSAYFSYSRSTFWDSPDQSNYNLSLSWYFDLGSIKNLSASLNGYRSEYNGDKDDGVYISLSVPWGNDSISYNGTFNGSQHRNQLGYSGHSQNGDNWQLHVGQDEQGAQADGYYSHQGALTDIDLSADYEEGSYRSLGMSLRGGMTLTTQGGALHRGSLAGSTRLLVDTDGIADVPVSGSGSPTSTNIFGKAVIADVGSYSRSLARIDLNKLPEKAEATKSVVQITLTEGAIGYRHFDVVSGEKMMAVFRLADGDFPPFGAEVKNERQQQLGLVADDGNAWLAGVKAGETLKVFWDGAAQCEASLPPTFTPELLANALLLPCKMLEGQPTTAPQKSSPLPAQPLIQEHTQTDGQPAAPVATTTQTPPIPLADNHAVNRKDME
>NZ_CP007534.1|WP_001044460.1|189538_190312_+|fimbria/pilus-periplasmic-chaperone
MNKTNHFKRQALIASVLLAAPLVSHSAIVPDRTRVIFNGNENSITVTLKNGNATLPYLAQAWLEDDKFAKDTRYFTALPPLQRIEPKSDGQVKVQPLPAAASLPQDRESLFYFNVREIPPKSDKPNTLQLALQTRIKFFYRPVAVARQVDKTHPWQTKLTLTYQGDGVIFDNPTPFYLVISNAGSKENETASGFKNLLIAPREKVTSPIKGSSLGSSPVVGYVDDYGGHRLLVFTCSGNTCKVNEEKTRDAEKKANK
>NZ_CP007534.1|WP_023244873.1|190331_190838_+|fimbrial-protein
MTMLTRWKMLVLLCGGFVASTEAAGTKTVQLELHLVVTQPPPCTVGGASVEFGDVLTTKVGDASQTKPVGYSLNCDGRASDYLKLQIQGTTTTISGEQVLQTSVQGLGIRIQQAGNKQLVPVGITDWLNFTLSGSNGPELEAVPVKEPTTQLAGGDFDASATLVVDYQ
>NZ_CP007534.1|WP_000832396.1|190852_191323_+|fimbrial-protein
MKRVLILTLLITQFACADNLTFHGKLINPPACTINNGETLEVSFGSVIIDNIDGVNYLTEIPWTLTCDSSFRDDALTFTLSYLGTATPYSANALTTNVPELGIELQQNGTVFPPGTSLTIDESSLPTLKAVPVKQPGKEPAEGDFEAFATLQVDYQ
>NZ_CP007534.1|WP_001079646.1|191319_191856_+|fimbrial-protein
MNRIFQTAGHLIGGVMLWAVCNTLPAATPNVHYSGKLVAGACNLVVDNDTMATVDFHTIGSDNFDASGQTTPVPFTLSLQDCKTALANGVLVTFQGVEDSTLPGLLALEPSSEASGFAIGVETAAQQPVSINATVGTAFVLKEGITTINLQARLQKYAGEEVMPGEFSGSATVSFEYQ

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP007534_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP007534_3

2305590-2305679

Orphan

Consensus_repeat	Method
TTGTCCAACGGATGTCCAACGGAT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP007534_3

>merge|NZ_CP007534|3|2305590-2305679|CRISPRCasFinder
TTGTCCAACGGATGTCCAACGGATGTCCAACGCAAACACCAGTAATGACGCGGCTCACAGCAAATGTTGTCCAACGGATGTCCAACGATT

>NZ_CP007534|3|3|2305590-2305679|CRISPRCasFinder
TTGTCCAACGGATGTCCAACGGAT	GTCCAACGCAAACACCAGTAATGACGCGGCTCACAGCAAATG
TTGTCCAACGGATGTCCAACGATT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP007534.1\|WP_006819448.1\|2307594_2307867_+\|DUF4752-family-protein	unknown	unknown	gnl\|CDD\|339554
NZ_CP007534.1\|WP_023245190.1\|2308601_2309048_+\|recombination-protein-NinB	unknown	unknown	gnl\|CDD\|368607
NZ_CP007534.1\|WP_000950971.1\|2309697_2309871_+\|protein-ninF	unknown	unknown	gnl\|CDD\|283468
NZ_CP007534.1\|WP_001125981.1\|2305055_2305202_+\|DUF2740-family-protein	unknown	unknown	gnl\|CDD\|287804
NZ_CP007534.1\|WP_023245189.1\|2308097_2308346_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007534.1\|WP_024139963.1\|2309044_2309218_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|340181
NZ_CP007534.1\|WP_000067726.1\|2304413_2304629_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_CP007534.1\|WP_000113765.1\|2309184_2309361_+\|NinE-family-protein	unknown	unknown	gnl\|CDD\|283078
NZ_CP007534.1\|WP_001532927.1\|2309363_2309705_+\|DUF2591-family-protein	unknown	unknown	gnl\|CDD\|107039
NZ_CP007534.1\|WP_006819447.1\|2306083_2307520_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|274672
NZ_CP007534.1\|WP_000776962.1\|2301354_2301669_-\|superinfection-exclusion-protein	unknown	unknown	gnl\|CDD\|107038
NZ_CP007534.1\|WP_000986768.1\|2309860_2310166_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007534.1\|WP_000216177.1\|2302736_2303075_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007534.1\|WP_071824239.1\|2301840_2302380_-\|pentapeptide-repeat-containing-protein	unknown	unknown	gnl\|CDD\|224276
NZ_CP007534.1\|WP_000213981.1\|2302463_2302658_-\|Restriction-inhibitor-protein-ral	unknown	unknown	gnl\|CDD\|287970
NZ_CP007534.1\|WP_071533030.1\|2303297_2303495_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007534.1\|WP_023177700.1\|2303632_2304295_-\|LexA-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224885
NZ_CP007534.1\|WP_138922303.1\|2303095_2303278_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007534.1\|WP_015968595.1\|2308348_2308645_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007534.1\|WP_001103492.1\|2304739_2305021_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|336083

Protein	Function_ID	Function_description	E-value
NZ_CP007534.1\|WP_006819448.1\|2307594_2307867_+\|DUF4752-family-protein	gnl\|CDD\|339554	pfam15944, DUF4752, Domain of unknown function (DUF4752). This family of proteins is found in bacteria and viruses. Proteins in this family are typically between 90 and 105 amino acids in length. There is a conserved GLA sequence motif.	1.77878e-31
NZ_CP007534.1\|WP_000950971.1\|2309697_2309871_+\|protein-ninF	gnl\|CDD\|283468	pfam05810, NinF, NinF protein. This family consists of several bacteriophage NinF proteins as well as related sequences from E. coli.	1.48732e-18
NZ_CP007534.1\|WP_001125981.1\|2305055_2305202_+\|DUF2740-family-protein	gnl\|CDD\|287804	pfam10872, DUF2740, Protein of unknown function (DUF2740). This family of proteins with unknown function has a highly conserved sequence.	5.85578e-19
NZ_CP007534.1\|WP_000113765.1\|2309184_2309361_+\|NinE-family-protein	gnl\|CDD\|283078	pfam05322, NinE, NINE Protein. This family consists of NINE proteins from several bacteriophages and from E. coli.	1.30346e-26
NZ_CP007534.1\|WP_024139963.1\|2309044_2309218_+\|hypothetical-protein	gnl\|CDD\|340181	pfam17466, NinD, Family of unknown function. This is a family of unknown function found in Enterobacteria phage P22 and Enterobacteria phage lambda.	4.45187e-31
NZ_CP007534.1\|WP_000067726.1\|2304413_2304629_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	1.38966e-12
NZ_CP007534.1\|WP_001532927.1\|2309363_2309705_+\|DUF2591-family-protein	gnl\|CDD\|107039	PHA01519, PHA01519, hypothetical protein.	1.24787e-45
NZ_CP007534.1\|WP_023245190.1\|2308601_2309048_+\|recombination-protein-NinB	gnl\|CDD\|368607	pfam05772, NinB, NinB protein. The ninR region of phage lambda contains two recombination genes, orf (ninB) and rap (ninG), that have roles when the RecF and RecBCD recombination pathways of E. coli, respectively, operate on phage lambda. NinB binds to single-stranded DNA.	3.00042e-49
NZ_CP007534.1\|WP_000776962.1\|2301354_2301669_-\|superinfection-exclusion-protein	gnl\|CDD\|107038	PHA01516, PHA01516, hypothetical protein.	2.94575e-63
NZ_CP007534.1\|WP_006819447.1\|2306083_2307520_+\|AAA-family-ATPase	gnl\|CDD\|274672	TIGR03600, phage_DnaB, phage replicative helicase, DnaB family, HK022 subfamily. Members of this family are phage (or prophage-region) homologs of the bacterial homohexameric replicative helicase DnaB. Some phage may rely on host DnaB, while others encode their own verions. This model describes the largest phage-specific clade among the close homologs of DnaB, but there are, or course, other DnaB homologs from phage that fall outside the scope of this model. [Mobile and extrachromosomal element functions, Prophage functions].	0
NZ_CP007534.1\|WP_071824239.1\|2301840_2302380_-\|pentapeptide-repeat-containing-protein	gnl\|CDD\|224276	COG1357, COG1357, Pentapeptide repeats containing protein [Function unknown].	6.39818e-24
NZ_CP007534.1\|WP_000213981.1\|2302463_2302658_-\|Restriction-inhibitor-protein-ral	gnl\|CDD\|287970	pfam11058, Ral, Antirestriction protein Ral. Ral alleviates restriction and enhances modification by the E.Coli restriction and modification system.	3.91147e-32
NZ_CP007534.1\|WP_023177700.1\|2303632_2304295_-\|LexA-family-transcriptional-regulator	gnl\|CDD\|224885	COG1974, LexA, SOS-response transcriptional repressors (RecA-mediated autopeptidases) [Transcription / Signal transduction mechanisms].	5.41329e-38
NZ_CP007534.1\|WP_001103492.1\|2304739_2305021_+\|hypothetical-protein	gnl\|CDD\|336083	pfam05269, Phage_CII, Bacteriophage CII protein. This family consists of several phage CII regulatory proteins. CII plays a key role in the lysis-lysogeny decision in bacteriophage lambda and related phages.	2.22453e-25

>NZ_CP007534.1|WP_001125981.1|2305055_2305202_+|DUF2740-family-protein
MPKQLSPDQDKLHKNILRDRFLSSFKQPGRFRAELEKVKLILKRKGHE
>NZ_CP007534.1|WP_001103492.1|2304739_2305021_+|hypothetical-protein
MNVVATKSKKAARIESTLLNKLAMMGQKTFAKAMGVPEYQVSRWKNGFFSQVSMMLAVLEYGIEDEEMAELTRRLATYLTKEKAPKNGEFFEA
>NZ_CP007534.1|WP_000067726.1|2304413_2304629_+|helix-turn-helix-transcriptional-regulator
MSNLRKIRETMKVSQAVLAEKVGCTQGAIGHYESGRRHPDLRMCRQLVEALNSFGANVQLDDVFPPELNAA
>NZ_CP007534.1|WP_023177700.1|2303632_2304295_-|LexA-family-transcriptional-regulator
MKTPWNELAKARMKQIGLTQDKLAEALGKTQGAIGHWLNGRREPSIEDIAAIMKQLGLKELVLSSDGMVDYPDSSLSNVSSPRPHTEIRRFPLISWVSAGNWCEAVEPYQLREIEVWPETTAHASERSFWLTVRGDSMTSPTGLSIPEGMQILVDPAIEPTNGRLVVAKLESENEATFKKYIVDAGQKYLKPLNPSYHMIPINGNCRIIGVVIEAKWQGL
>NZ_CP007534.1|WP_071533030.1|2303297_2303495_+|hypothetical-protein
MALVLQIARRLTLTAYSLPSASAEEVGFYLQPKPISFGICSRFVSASSKLKSVAFPFGYQRPADG
>NZ_CP007534.1|WP_138922303.1|2303095_2303278_-|hypothetical-protein
MRKPKTTTKTIIHFTLKRRPEGNRNGDERGRVWFHKYSFLDKPFYRAPLLVRRLSFNFNQ
>NZ_CP007534.1|WP_000216177.1|2302736_2303075_-|hypothetical-protein
MTVITYGKSTFAGNAKTRRHERRRKLAIERDTICNIIDSIFGCDVPDASHEVKAKRIDRVTKAISLAGTRQKKVEVTAVKKNRIYYRDVNPLGNKIHAVQKQRGKSIPAYYD
>NZ_CP007534.1|WP_000213981.1|2302463_2302658_-|Restriction-inhibitor-protein-ral
MTTTIDTNQWCSRFVKCKGCKLDAECMVKPEEMALVREDGKIVDKWAIRTTAMIARELEKLKAT
>NZ_CP007534.1|WP_071824239.1|2301840_2302380_-|pentapeptide-repeat-containing-protein
MNSADLSKILEEHKVWITSMRESGSRADLCGTNLRGADLRGADLRGADLRGADLRGANLRGADLRGADLRGANLRGADLRGADLRGANLCDADLPDLTFVILGEKYFISITNGEYVRAGCQNHTVEEWRKYSKQEIAEMDGRKALKFYPRLLDIIDFYIGKGERPDWLTSKEYADEVTG
>NZ_CP007534.1|WP_000776962.1|2301354_2301669_-|superinfection-exclusion-protein
MKLRVWHIPQVPMKPFIVEVASVEEGVRVMDALADYDAFQYDNNIKPDYCNANGLEMWDESLTDQDLEEMELTDRWVDWYSECQCYDDPREYIESLKEETTAAA
>NZ_CP007534.1|WP_006819447.1|2306083_2307520_+|AAA-family-ATPase
MTDNFYAPPHSIEAEQAVIGGLLLDDDSSERVQKVLAMLKPDSFYSRPHKILFEEITRMHREQKPVDGLTLFDELERKSLTVSVGGFAYIADIAKNTPSAANIVAYAMQVRETAMERYAINRMTEATELLYSRNGMTATQKYEAIQAIFTQLTDHAKTGSRRGLRSFGEVMEDWVGDLDKRFDPSGEQRGMSTGIPSLDRMLSPKGLVKGSLFVIGARPKMGKTTLYSQMAINCAVHEKKPALMFSLEMPGDQILEKLVGQKSGVNPNIFYLPATNDADDGYQGDYDGDFNRAIETANRLSEIDMLYIDDTPGLSLAQIVSESRRIKREKGCIGMILVDYLTLMTAEKADRNDLAYGMITKGLKNLAKELDCVVVLLTQLNRALENRTNKRPLPSDSRDTGQIEQDCDYWVGIHREGAFDDSVPPGETELILRLNRHGNTGTVYCIQANGAIYDTDQQSAEMRRREREEPQSKKKGGF
>NZ_CP007534.1|WP_006819448.1|2307594_2307867_+|DUF4752-family-protein
MKDLLVTLNVGLSLLGYAYIMFKTGQWIITNALKQWDKRRKVSAKQKAVDALYEAYELDKVSEGDTVKVATKEGLVIMICRHEKTNTPAH
>NZ_CP007534.1|WP_023245189.1|2308097_2308346_+|hypothetical-protein
MDESRKAFEQWFQSKYKCTMETMKVMQIKVELAWEAWQASREAIEIKLDDKVMVEDEFDKGHNCAIDYCADVIRAAGIKVKE
>NZ_CP007534.1|WP_015968595.1|2308348_2308645_+|hypothetical-protein
MSKVSRGMKISLIFILNPHRIFLASAVWLSDFVYWLADKLDDFARWLESFANARFWLWPLIGERMSDELNRYYADKRKEKSRRASEAIIPASQRSNQK
>NZ_CP007534.1|WP_023245190.1|2308601_2309048_+|recombination-protein-NinB
MKQLFLLRNEAIRNNAIDAILSLLIDDKSPHEVHVKAPKRTKAQNDRMWPMLHDVSRQVLWHGQRLSPEDWKDIFTALWLKTKKLEQRSVPGIDGGVVLLGVRTSKMRKASMTELIEIMFWFGSERNVRWSDDSRRECEWSQLTGRVA
>NZ_CP007534.1|WP_024139963.1|2309044_2309218_+|hypothetical-protein
MKRCYRCGESKDDYRFRPNQPYWHQWCIRCDRSPVGNFPLPETKEDVWHDSDEVSPT
>NZ_CP007534.1|WP_000113765.1|2309184_2309361_+|NinE-family-protein
MARQRRSITDIICENCKYLPTKRSRNKPKPIPKESDVKTFNYTAHLWDIRWLRERARK
>NZ_CP007534.1|WP_001532927.1|2309363_2309705_+|DUF2591-family-protein
MDYSQLSDFEINRMVGDIIFKGLWACKPETSGNNTNKWYYGNADTTFEPLNHLPDYCNDPSASWPIIEKHRISILDQLTEWCVDAKGVSPIFDTRPLRAAMIVFLMMQDANNA
>NZ_CP007534.1|WP_000950971.1|2309697_2309871_+|protein-ninF
MLSPSQSLQYQKESVERALTCANCGQKLHVLEVHVCSDCCAELMADPNGQMLEEDDE
>NZ_CP007534.1|WP_000986768.1|2309860_2310166_+|hypothetical-protein
MMSELRAGGIAIVIFSENKPEIGRCVELIEKVTNGYVFNFPGAGKHGWRDDAPGWLVKGDVSIYTNKPSGGFSYFYSDELMPIDGEDFSHEDEQQKELANG

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP007534_2	2.11\|180285\|32\|NZ_CP007534\|CRT,PILER-CR	180285-180316	32	KT630649	Salmonella phage SEN34, complete genome	1413-1444	0	1.0
NZ_CP007534_3	3.1\|2305614\|42\|NZ_CP007534\|CRISPRCasFinder	2305614-2305655	42	MW013502	Salmonella virus L cI-40 13-am43, complete genome	31672-31713	0	1.0
NZ_CP007534_3	3.1\|2305614\|42\|NZ_CP007534\|CRISPRCasFinder	2305614-2305655	42	NC_004348	Enterobacteria phage ST64T, complete genome	14874-14915	0	1.0
NZ_CP007534_3	3.1\|2305614\|42\|NZ_CP007534\|CRISPRCasFinder	2305614-2305655	42	MW013503	Salmonella virus L cII-101, complete genome	31673-31714	0	1.0
NZ_CP007534_3	3.1\|2305614\|42\|NZ_CP007534\|CRISPRCasFinder	2305614-2305655	42	AY052766	Salmonella typhimurium bacteriophage ST64T, complete genome	14874-14915	0	1.0
NZ_CP007534_3	3.1\|2305614\|42\|NZ_CP007534\|CRISPRCasFinder	2305614-2305655	42	MF188997	Salmonella phage vB_SalP_PM43, complete genome	14769-14810	0	1.0
NZ_CP007534_2	2.5\|180283\|34\|NZ_CP007534\|CRISPRCasFinder	180283-180316	34	KT630649	Salmonella phage SEN34, complete genome	1413-1446	2	0.941
NZ_CP007534_3	3.1\|2305614\|42\|NZ_CP007534\|CRISPRCasFinder	2305614-2305655	42	NC_011802	Salmonella enterica bacteriophage SE1, complete genome	15034-15075	2	0.952
NZ_CP007534_3	3.1\|2305614\|42\|NZ_CP007534\|CRISPRCasFinder	2305614-2305655	42	CP051278	Salmonella phage ST-87, complete genome	25843-25884	2	0.952
NZ_CP007534_3	3.1\|2305614\|42\|NZ_CP007534\|CRISPRCasFinder	2305614-2305655	42	CP051288	Salmonella phage ST-29, complete genome	38685-38726	2	0.952
NZ_CP007534_3	3.1\|2305614\|42\|NZ_CP007534\|CRISPRCasFinder	2305614-2305655	42	CP051285	Salmonella phage ST-32, complete genome	31779-31820	2	0.952
NZ_CP007534_3	3.1\|2305614\|42\|NZ_CP007534\|CRISPRCasFinder	2305614-2305655	42	NC_014900	Salmonella phage ST160, complete genome	15102-15143	2	0.952
NZ_CP007534_3	3.1\|2305614\|42\|NZ_CP007534\|CRISPRCasFinder	2305614-2305655	42	CP051272	Salmonella phage SW-70, complete genome	35832-35873	2	0.952
NZ_CP007534_3	3.1\|2305614\|42\|NZ_CP007534\|CRISPRCasFinder	2305614-2305655	42	NC_016160	Escherichia phage HK75, complete genome	28592-28633	6	0.857
NZ_CP007534_3	3.1\|2305614\|42\|NZ_CP007534\|CRISPRCasFinder	2305614-2305655	42	NC_019705	Enterobacteria phage mEpX2, complete genome	29046-29087	6	0.857
NZ_CP007534_3	3.1\|2305614\|42\|NZ_CP007534\|CRISPRCasFinder	2305614-2305655	42	KY979108	Escherichia phage ECP1, complete genome	427-468	6	0.857
NZ_CP007534_3	3.1\|2305614\|42\|NZ_CP007534\|CRISPRCasFinder	2305614-2305655	42	NC_019719	Enterobacteria phage HK633, complete genome	31740-31781	6	0.857
NZ_CP007534_3	3.1\|2305614\|42\|NZ_CP007534\|CRISPRCasFinder	2305614-2305655	42	JF974339	Enterobacteria phage IME10, complete genome	9723-9764	6	0.857
NZ_CP007534_3	3.1\|2305614\|42\|NZ_CP007534\|CRISPRCasFinder	2305614-2305655	42	NC_005344	Enterobacteria phage Sf6, complete genome	28410-28451	6	0.857
NZ_CP007534_1	1.1\|170567\|32\|NZ_CP007534\|CRISPRCasFinder	170567-170598	32	NC_016113	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence	1151729-1151760	10	0.688
NZ_CP007534_1	1.1\|170567\|32\|NZ_CP007534\|CRISPRCasFinder	170567-170598	32	NC_017585	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence	661429-661460	10	0.688
NZ_CP007534_1	1.3\|170569\|32\|NZ_CP007534\|PILER-CR	170569-170600	32	NC_016113	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence	1151729-1151760	10	0.688
NZ_CP007534_1	1.3\|170569\|32\|NZ_CP007534\|PILER-CR	170569-170600	32	NC_017585	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence	661429-661460	10	0.688

1. spacer 2.11|180285|32|NZ_CP007534|CRT,PILER-CR matches to KT630649 (Salmonella phage SEN34, complete genome) position: , mismatch: 0, identity: 1.0

ttctcgcattccctgcgataccactcatcatc	CRISPR spacer
ttctcgcattccctgcgataccactcatcatc	Protospacer
********************************

2. spacer 3.1|2305614|42|NZ_CP007534|CRISPRCasFinder matches to MW013502 (Salmonella virus L cI-40 13-am43, complete genome) position: , mismatch: 0, identity: 1.0

gtccaacgcaaacaccagtaatgacgcggctcacagcaaatg	CRISPR spacer
gtccaacgcaaacaccagtaatgacgcggctcacagcaaatg	Protospacer
******************************************

3. spacer 3.1|2305614|42|NZ_CP007534|CRISPRCasFinder matches to NC_004348 (Enterobacteria phage ST64T, complete genome) position: , mismatch: 0, identity: 1.0

gtccaacgcaaacaccagtaatgacgcggctcacagcaaatg	CRISPR spacer
gtccaacgcaaacaccagtaatgacgcggctcacagcaaatg	Protospacer
******************************************

4. spacer 3.1|2305614|42|NZ_CP007534|CRISPRCasFinder matches to MW013503 (Salmonella virus L cII-101, complete genome) position: , mismatch: 0, identity: 1.0

gtccaacgcaaacaccagtaatgacgcggctcacagcaaatg	CRISPR spacer
gtccaacgcaaacaccagtaatgacgcggctcacagcaaatg	Protospacer
******************************************

5. spacer 3.1|2305614|42|NZ_CP007534|CRISPRCasFinder matches to AY052766 (Salmonella typhimurium bacteriophage ST64T, complete genome) position: , mismatch: 0, identity: 1.0

gtccaacgcaaacaccagtaatgacgcggctcacagcaaatg	CRISPR spacer
gtccaacgcaaacaccagtaatgacgcggctcacagcaaatg	Protospacer
******************************************

6. spacer 3.1|2305614|42|NZ_CP007534|CRISPRCasFinder matches to MF188997 (Salmonella phage vB_SalP_PM43, complete genome) position: , mismatch: 0, identity: 1.0

gtccaacgcaaacaccagtaatgacgcggctcacagcaaatg	CRISPR spacer
gtccaacgcaaacaccagtaatgacgcggctcacagcaaatg	Protospacer
******************************************

7. spacer 2.5|180283|34|NZ_CP007534|CRISPRCasFinder matches to KT630649 (Salmonella phage SEN34, complete genome) position: , mismatch: 2, identity: 0.941

acttctcgcattccctgcgataccactcatcatc	CRISPR spacer
ttttctcgcattccctgcgataccactcatcatc	Protospacer
 .********************************

8. spacer 3.1|2305614|42|NZ_CP007534|CRISPRCasFinder matches to NC_011802 (Salmonella enterica bacteriophage SE1, complete genome) position: , mismatch: 2, identity: 0.952

gtccaacgcaaacaccagtaatgacgcggctcacagcaaatg	CRISPR spacer
gtccaacgcaaacaccagtaatgacgcggatcacagcgaatg	Protospacer
***************************** *******.****

9. spacer 3.1|2305614|42|NZ_CP007534|CRISPRCasFinder matches to CP051278 (Salmonella phage ST-87, complete genome) position: , mismatch: 2, identity: 0.952

gtccaacgcaaacaccagtaatgacgcggctcacagcaaatg	CRISPR spacer
gtccaacgcaaacaccagtaatgacgcggatcacagcgaatg	Protospacer
***************************** *******.****

10. spacer 3.1|2305614|42|NZ_CP007534|CRISPRCasFinder matches to CP051288 (Salmonella phage ST-29, complete genome) position: , mismatch: 2, identity: 0.952

gtccaacgcaaacaccagtaatgacgcggctcacagcaaatg	CRISPR spacer
gtccaacgcaaacaccagtaatgacgcggatcacagcgaatg	Protospacer
***************************** *******.****

11. spacer 3.1|2305614|42|NZ_CP007534|CRISPRCasFinder matches to CP051285 (Salmonella phage ST-32, complete genome) position: , mismatch: 2, identity: 0.952

gtccaacgcaaacaccagtaatgacgcggctcacagcaaatg	CRISPR spacer
gtccaacgcaaacaccagtaatgacgcggatcacagcgaatg	Protospacer
***************************** *******.****

12. spacer 3.1|2305614|42|NZ_CP007534|CRISPRCasFinder matches to NC_014900 (Salmonella phage ST160, complete genome) position: , mismatch: 2, identity: 0.952

gtccaacgcaaacaccagtaatgacgcggctcacagcaaatg	CRISPR spacer
gtccaacgcaaacaccagtaatgacgcggatcacagcgaatg	Protospacer
***************************** *******.****

13. spacer 3.1|2305614|42|NZ_CP007534|CRISPRCasFinder matches to CP051272 (Salmonella phage SW-70, complete genome) position: , mismatch: 2, identity: 0.952

gtccaacgcaaacaccagtaatgacgcggctcacagcaaatg	CRISPR spacer
gtccaacgcaaacaccagtaatgacgcggatcacagcgaatg	Protospacer
***************************** *******.****

14. spacer 3.1|2305614|42|NZ_CP007534|CRISPRCasFinder matches to NC_016160 (Escherichia phage HK75, complete genome) position: , mismatch: 6, identity: 0.857

gtccaacgcaaacaccagtaatgacgcggctcacagcaaatg	CRISPR spacer
gtccaacgcaaacaccagtaatggcgcggctctcagcggaga	Protospacer
***********************.******** ****..* .

15. spacer 3.1|2305614|42|NZ_CP007534|CRISPRCasFinder matches to NC_019705 (Enterobacteria phage mEpX2, complete genome) position: , mismatch: 6, identity: 0.857

gtccaacgcaaacaccagtaatgacgcggctcacagcaaatg	CRISPR spacer
gtccaacgcaaacaccagtaatggcgcggctctcagcggaga	Protospacer
***********************.******** ****..* .

16. spacer 3.1|2305614|42|NZ_CP007534|CRISPRCasFinder matches to KY979108 (Escherichia phage ECP1, complete genome) position: , mismatch: 6, identity: 0.857

gtccaacgcaaacaccagtaatgacgcggctcacagcaaatg	CRISPR spacer
gtccaacgcaaacaccagtaatggcgcggctctcagcggaga	Protospacer
***********************.******** ****..* .

17. spacer 3.1|2305614|42|NZ_CP007534|CRISPRCasFinder matches to NC_019719 (Enterobacteria phage HK633, complete genome) position: , mismatch: 6, identity: 0.857

gtccaacgcaaacaccagtaatgacgcggctcacagcaaatg	CRISPR spacer
gtccaacgcaaacaccagtaatggcgcggctctcagcggaga	Protospacer
***********************.******** ****..* .

18. spacer 3.1|2305614|42|NZ_CP007534|CRISPRCasFinder matches to JF974339 (Enterobacteria phage IME10, complete genome) position: , mismatch: 6, identity: 0.857

gtccaacgcaaacaccagtaatgacgcggctcacagcaaatg	CRISPR spacer
gtccaacgcaaacaccagtaatggcgcggctctcagcggaga	Protospacer
***********************.******** ****..* .

19. spacer 3.1|2305614|42|NZ_CP007534|CRISPRCasFinder matches to NC_005344 (Enterobacteria phage Sf6, complete genome) position: , mismatch: 6, identity: 0.857

gtccaacgcaaacaccagtaatgacgcggctcacagcaaatg	CRISPR spacer
gtccaacgcaaacaccagtaatggcgcggctctcagcggaga	Protospacer
***********************.******** ****..* .

20. spacer 1.1|170567|32|NZ_CP007534|CRISPRCasFinder matches to NC_016113 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence) position: , mismatch: 10, identity: 0.688

ttttcagcccttgtcgactgcggaacgcccct	CRISPR spacer
tccctcaccctcgtcgactgcggaccgcccgg	Protospacer
*.... .****.************ *****

21. spacer 1.1|170567|32|NZ_CP007534|CRISPRCasFinder matches to NC_017585 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence) position: , mismatch: 10, identity: 0.688

ttttcagcccttgtcgactgcggaacgcccct	CRISPR spacer
tccctcaccctcgtcgactgcggaccgcccgg	Protospacer
*.... .****.************ *****

22. spacer 1.3|170569|32|NZ_CP007534|PILER-CR matches to NC_016113 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence) position: , mismatch: 10, identity: 0.688

ttttcagcccttgtcgactgcggaacgcccct	CRISPR spacer
tccctcaccctcgtcgactgcggaccgcccgg	Protospacer
*.... .****.************ *****

23. spacer 1.3|170569|32|NZ_CP007534|PILER-CR matches to NC_017585 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence) position: , mismatch: 10, identity: 0.688

ttttcagcccttgtcgactgcggaacgcccct	CRISPR spacer
tccctcaccctcgtcgactgcggaccgcccgg	Protospacer
*.... .****.************ *****

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

462316 : 478765

Erwinia_phage(30.77%)

tRNA,tail,integrase

attL 459987:460010|attR 484677:484700

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
459987:460010	attL	NA	NA	NA	NA
WP_001264394.1\|462316_463330_-\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	2.8e-109	59.5
WP_001144069.1\|463557_463773_+	30S ribosomal protein S21	NA	NA	NA	NA
WP_000918865.1\|464008_465754_+	DNA primase	A0A0K1LMQ9	Caulobacter_phage	2.1e-72	38.4
WP_001519776.1\|465903_467751_+	RNA polymerase sigma factor RpoD	A0A2I7SAT0	Vibrio_phage	8.4e-35	33.7
WP_000237776.1\|467873_468380_-	G/U mismatch-specific DNA glycosylase	NA	NA	NA	NA
WP_000468307.1\|468738_468957_-	DNA-binding transcriptional regulator	A0A2I8TV89	Erwinia_phage	9.5e-39	98.6
WP_023244904.1\|469023_470193_-	phage late control D family protein	A0A0M5M5V5	Salmonella_phage	5.0e-211	97.7
WP_023135453.1\|470189_470675_-\|tail	phage tail protein	A0A0M4RCP0	Salmonella_phage	2.3e-85	99.4
WP_023244906.1\|471468_471669_-	DUF2724 domain-containing protein	Q6K1F7	Salmonella_virus	2.9e-26	87.9
WP_023244907.1\|471676_472186_-	phage regulatory CII family protein	A0A0M4QWN1	Salmonella_phage	1.5e-87	96.4
WP_023244908.1\|472206_472482_-	hypothetical protein	A0A218M4I5	Erwinia_phage	7.8e-38	89.4
WP_023244909.1\|472614_473190_+	phage repressor protein CI	A0A218M4J1	Erwinia_phage	2.6e-67	65.4
WP_023244910.1\|473189_474191_+\|integrase	tyrosine-type recombinase/integrase	A0A218M4I3	Erwinia_phage	2.7e-189	96.4
WP_023244911.1\|474226_475246_+	FRG domain-containing protein	A0A1S6KZX9	Salmonella_phage	2.6e-09	23.7
WP_000213758.1\|475556_476324_-	siderophore-interacting protein	NA	NA	NA	NA
WP_000983434.1\|476555_477203_+	PadR family transcriptional regulator	NA	NA	NA	NA
WP_000478465.1\|477199_478765_-	HAMP domain-containing protein	A0A2H4J162	uncultured_Caudovirales_phage	2.0e-13	37.0
484677:484700	attR	NA	NA	NA	NA

DBSCAN-SWA_2

1044805 : 1053474

Enterobacteria_phage(85.71%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_023245487.1\|1044805_1045372_-	hypothetical protein	Q7M2A1	Enterobacteria_phage	3.7e-58	64.3
WP_023245488.1\|1045388_1045634_-	phage transcriptional activator, Ogr/delta	Q7M294	Enterobacteria_phage	2.4e-30	75.3
WP_023245489.1\|1045630_1046368_-	hypothetical protein	Q7M2A2	Enterobacteria_phage	9.0e-81	65.3
WP_023245490.1\|1046906_1047173_+	AlpA family transcriptional regulator	Q7M299	Enterobacteria_phage	1.5e-30	71.6
WP_023245491.1\|1047169_1047718_+	ash family protein	Q7M2A7	Enterobacteria_phage	9.1e-30	65.8
WP_001216599.1\|1047714_1047942_+	hypothetical protein	NA	NA	NA	NA
WP_001472077.1\|1047938_1048259_+	DUF5375 domain-containing protein	NA	NA	NA	NA
WP_023245492.1\|1048273_1050607_+	DNA primase	Q7M2A8	Enterobacteria_phage	0.0e+00	83.5
WP_000120776.1\|1051261_1051606_-	hypothetical protein	NA	NA	NA	NA
WP_023245493.1\|1052283_1053474_+	AAA family ATPase	C7BGE8	Burkholderia_phage	3.5e-10	33.3

DBSCAN-SWA_3

2289953 : 2334174

Salmonella_phage(71.43%)

coat,lysis,holin,terminase,integrase,protease,portal

attL 2293800:2293841|attR 2334463:2334504

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001043667.1\|2289953_2291006_-	phosphoporin PhoE	Q1MVN1	Enterobacteria_phage	2.6e-113	58.8
WP_001285275.1\|2291288_2292392_+	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	6.9e-61	39.8
WP_023245184.1\|2292403_2293654_+	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	1.8e-97	48.0
2293800:2293841	attL	NA	NA	NA	NA
WP_006816417.1\|2293859_2295023_-\|integrase	site-specific integrase	A0A220NQU7	Salmonella_phage	1.4e-229	100.0
WP_024139959.1\|2295252_2295882_-	DUF5420 family protein	A0A220NQT7	Salmonella_phage	5.8e-121	100.0
WP_001277764.1\|2295982_2296162_-	Eag protein	A0A075B8F7	Enterobacteria_phage	1.9e-29	100.0
WP_006816413.1\|2296258_2296804_-	DUF551 domain-containing protein	A0A220NQT9	Salmonella_phage	9.5e-104	100.0
WP_006816411.1\|2296800_2297616_-	DUF550 domain-containing protein	A0A220NQU1	Salmonella_phage	7.5e-137	100.0
WP_006816410.1\|2297626_2297890_-	hypothetical protein	A0A220NQU8	Salmonella_phage	3.7e-45	100.0
WP_016049830.1\|2297877_2298153_-	hypothetical protein	I6R982	Salmonella_phage	1.9e-52	100.0
WP_016049831.1\|2298186_2298417_-	hypothetical protein	A0A220NQV0	Salmonella_phage	6.9e-40	100.0
WP_006816408.1\|2298419_2298941_-	ead/Ea22-like family protein	A0A220NQV2	Salmonella_phage	2.1e-92	100.0
WP_015968590.1\|2298937_2299315_-	hypothetical protein	A0A220NQV7	Salmonella_phage	2.5e-63	100.0
WP_001214771.1\|2299311_2299482_-	DUF2737 family protein	A0A220NQV6	Salmonella_phage	6.1e-25	100.0
WP_001111310.1\|2299492_2299786_-	DUF2856 family protein	E7C9P8	Salmonella_phage	3.2e-50	100.0
WP_001253475.1\|2299832_2300117_-	sigma-70 family RNA polymerase sigma factor	E7C9P9	Salmonella_phage	2.3e-45	100.0
WP_000365269.1\|2300116_2300824_-	recombinase	E7C9Q0	Salmonella_phage	3.7e-140	100.0
WP_000361564.1\|2301017_2301131_-	host cell division inhibitory peptide Kil	C6ZR39	Salmonella_phage	7.8e-13	100.0
WP_001541875.1\|2301123_2301270_-\|protease	protease FtsH-inhibitory lysogeny factor CIII	E7C9Q3	Salmonella_phage	1.3e-20	100.0
WP_000776962.1\|2301354_2301669_-	superinfection exclusion protein	E7C9Q4	Salmonella_phage	1.9e-56	100.0
WP_071824239.1\|2301840_2302380_-	pentapeptide repeat-containing protein	E7C9Q5	Salmonella_phage	1.2e-53	99.4
WP_000213981.1\|2302463_2302658_-	Restriction inhibitor protein ral	E7C9Q6	Salmonella_phage	2.5e-30	100.0
WP_000216177.1\|2302736_2303075_-	hypothetical protein	E7C9Q7	Salmonella_phage	1.1e-57	100.0
WP_138922303.1\|2303095_2303278_-	hypothetical protein	A0A220NQW5	Salmonella_phage	3.3e-29	100.0
WP_071533030.1\|2303297_2303495_+	hypothetical protein	A0A075B8J1	Enterobacteria_phage	1.5e-11	97.1
WP_023177700.1\|2303632_2304295_-	LexA family transcriptional regulator	Q37946	Enterobacteria_phage	6.3e-126	100.0
WP_000067726.1\|2304413_2304629_+	helix-turn-helix transcriptional regulator	A0A0M4RTV8	Salmonella_phage	4.1e-34	100.0
WP_001103492.1\|2304739_2305021_+	hypothetical protein	Q76H54	Enterobacteria_phage	4.3e-44	100.0
WP_001125981.1\|2305055_2305202_+	DUF2740 family protein	A0A075B8K7	Enterobacteria_phage	1.5e-19	100.0
WP_006819445.1\|2305194_2306094_+	hypothetical protein	A0A220NQX5	Salmonella_phage	2.1e-156	100.0
WP_006819447.1\|2306083_2307520_+	AAA family ATPase	A0A220NQX0	Salmonella_phage	7.2e-276	100.0
WP_006819448.1\|2307594_2307867_+	DUF4752 family protein	A0A220NQX8	Salmonella_phage	4.2e-44	100.0
WP_023245189.1\|2308097_2308346_+	hypothetical protein	A0A220NQX3	Salmonella_phage	5.2e-41	100.0
WP_015968595.1\|2308348_2308645_+	hypothetical protein	A0A220NQY0	Salmonella_phage	2.8e-49	100.0
WP_023245190.1\|2308601_2309048_+	recombination protein NinB	A0A220NQX4	Salmonella_phage	8.3e-82	100.0
WP_024139963.1\|2309044_2309218_+	hypothetical protein	Q8HAF7	Salmonella_phage	8.9e-32	100.0
WP_000113765.1\|2309184_2309361_+	NinE family protein	C6ZR57	Salmonella_phage	4.6e-28	100.0
WP_001532927.1\|2309363_2309705_+	DUF2591 family protein	Q76H72	Enterobacteria_phage	2.1e-64	100.0
WP_000950971.1\|2309697_2309871_+	protein ninF	A0A220NQX7	Salmonella_phage	5.6e-26	100.0
WP_000986768.1\|2309860_2310166_+	hypothetical protein	Q8HAF3	Salmonella_phage	1.3e-54	100.0
WP_000002241.1\|2310158_2310449_+	DUF1364 domain-containing protein	A0A220NQY2	Salmonella_phage	1.7e-51	100.0
WP_015968599.1\|2310445_2310841_+	RusA family crossover junction endodeoxyribonuclease	A0A220NQY4	Salmonella_phage	9.1e-72	100.0
WP_000149925.1\|2310837_2311041_+	protein ninH	A0A075B8J4	Enterobacteria_phage	7.2e-33	100.0
WP_000219143.1\|2311021_2311201_+	hypothetical protein	E7C9S6	Salmonella_phage	9.2e-24	100.0
WP_000027541.1\|2311197_2311716_+	DUF1133 family protein	A0A192Y911	Salmonella_phage	9.0e-96	100.0
WP_001129219.1\|2312115_2312433_+\|holin	holin	E7C9S8	Salmonella_phage	1.1e-54	100.0
WP_001194317.1\|2312419_2312818_+	M15 family metallopeptidase	E7C9S9	Salmonella_phage	1.1e-69	100.0
WP_001541885.1\|2312814_2313267_+\|lysis	lysis protein	E7C9T0	Salmonella_phage	5.0e-74	100.0
WP_000808099.1\|2313562_2313805_+	DUF2560 family protein	Q76H60	Enterobacteria_phage	1.7e-33	100.0
WP_001140562.1\|2313808_2314198_+	hypothetical protein	Q76H27	Enterobacteria_phage	3.9e-75	100.0
WP_001687044.1\|2314197_2314602_+	hypothetical protein	Q76H26	Enterobacteria_phage	1.1e-67	100.0
WP_000729923.1\|2314605_2315094_+	hypothetical protein	Q76H25	Enterobacteria_phage	1.0e-88	100.0
WP_006819463.1\|2315071_2316571_+\|terminase	terminase large subunit	Q5C836	Enterobacteria_phage	1.7e-307	100.0
WP_006819465.1\|2316570_2318748_+\|portal	portal protein	Q5C835	Enterobacteria_phage	0.0e+00	100.0
WP_006819467.1\|2318761_2319673_+	scaffolding protein	A0A220NQZ9	Salmonella_phage	7.5e-162	100.0
WP_001196937.1\|2319672_2320965_+\|coat	coat protein	Q76H21	Enterobacteria_phage	1.1e-243	100.0
WP_000538674.1\|2321005_2321566_+	hypothetical protein	E7C9T9	Salmonella_phage	1.3e-103	100.0
WP_001166093.1\|2321549_2322050_+	packaged DNA stabilization protein p27	E7C9U0	Salmonella_phage	2.5e-90	100.0
WP_006819470.1\|2322009_2323428_+	Tail accessory protein	A0A220NQZ5	Salmonella_phage	4.9e-277	100.0
WP_000774919.1\|2323431_2324070_+	hypothetical protein	A8CGD2	Salmonella_phage	6.3e-91	100.0
WP_000627703.1\|2324069_2324525_+	DUF2824 family protein	E7C9U3	Salmonella_phage	1.8e-87	100.0
WP_006819472.1\|2324527_2325217_+	hypothetical protein	I1TEJ4	Salmonella_phage	3.9e-94	100.0
WP_006819474.1\|2325226_2326561_+	phage DNA ejection protein	A0A220NR03	Salmonella_phage	2.7e-245	100.0
WP_001029860.1\|2326560_2328537_+	hypothetical protein	Q76H13	Enterobacteria_phage	0.0e+00	100.0
WP_071533035.1\|2328675_2328969_+	hypothetical protein	Q76H12	Enterobacteria_phage	3.2e-50	100.0
WP_000532177.1\|2328989_2329238_-	Arc family DNA-binding protein	Q76H48	Enterobacteria_phage	1.8e-38	100.0
WP_006819477.1\|2329373_2331377_+	protein 9	A0A220NR02	Salmonella_phage	0.0e+00	100.0
WP_000671496.1\|2331435_2332893_-	hypothetical protein	A8CG94	Salmonella_phage	1.3e-240	100.0
WP_000703639.1\|2332882_2333815_-	glycosyltransferase family 2 protein	A8CG95	Salmonella_phage	5.5e-176	100.0
WP_000915528.1\|2333811_2334174_-	GtrA family protein	A0A192Y6N5	Salmonella_phage	5.0e-61	100.0
2334463:2334504	attR	NA	NA	NA	NA

DBSCAN-SWA_4

2927005 : 2934317

Dickeya_phage(16.67%)

protease,integrase

attL 2928256:2928270|attR 2940068:2940082

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001201751.1\|2927005_2928124_+	macrolide transporter subunit MacA	A0A140XAI1	Dickeya_phage	1.4e-08	38.9
WP_000125873.1\|2928120_2930067_+	macrolide ABC transporter ATP-binding protein/permease MacB	G9BWD6	Planktothrix_phage	2.0e-39	43.1
2928256:2928270	attL	NA	NA	NA	NA
WP_000447499.1\|2930196_2930418_-	cold shock-like protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	9.3e-18	64.2
WP_023245268.1\|2930741_2931062_+\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	3.5e-13	45.7
WP_023245267.1\|2931092_2933369_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	4.8e-165	42.3
WP_001117984.1\|2933580_2933778_-	hypothetical protein	NA	NA	NA	NA
WP_023228156.1\|2933939_2934317_-\|integrase	integrase	A0A077KET4	Ralstonia_phage	1.2e-20	41.0
2940068:2940082	attR	NA	NA	NA	NA

DBSCAN-SWA_5

3159285 : 3205562

Salmonella_phage(25.93%)

tRNA,tail,transposase,integrase

attL 3159826:3159853|attR 3194272:3194299

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000502119.1\|3159285_3159744_+\|transposase	IS200/IS605-like element IS200F family transposase	I4AZI8	Saccharomonospora_phage	1.0e-13	31.5
3159826:3159853	attL	NA	NA	NA	NA
WP_000482970.1\|3159872_3160838_-	L,D-transpeptidase family protein	NA	NA	NA	NA
WP_001114323.1\|3160985_3164432_-	transcription-repair coupling factor	NA	NA	NA	NA
WP_001272105.1\|3164658_3165969_+	lipoprotein-releasing ABC transporter permease subunit LolC	NA	NA	NA	NA
WP_001033714.1\|3165961_3166663_+	lipoprotein-releasing ABC transporter ATP-binding protein LolD	G9BWD6	Planktothrix_phage	2.4e-35	40.7
WP_000168091.1\|3166662_3167907_+	lipoprotein-releasing ABC transporter permease subunit LolE	NA	NA	NA	NA
WP_000291332.1\|3167935_3168847_+	N-acetylglucosamine kinase	NA	NA	NA	NA
WP_001191856.1\|3168865_3169687_+	NAD-dependent protein deacylase	A0A2I7S9Y2	Vibrio_phage	1.0e-21	33.5
WP_000759329.1\|3169768_3170815_-	spermidine/putrescine ABC transporter substrate-binding protein PotD	NA	NA	NA	NA
WP_000580299.1\|3170839_3171619_-	spermidine/putrescine ABC transporter permease PotC	NA	NA	NA	NA
WP_001533329.1\|3171934_3172945_-	SPI-2 type III secretion system effector SifA	NA	NA	NA	NA
WP_000799391.1\|3173273_3174137_-	spermidine/putrescine ABC transporter permease PotB	Q6GZ02	Mycoplasma_phage	2.0e-10	26.2
WP_000531607.1\|3174120_3175257_-	spermidine/putrescine ABC transporter ATP-binding protein PotA	G3M9Y6	Bacillus_virus	2.1e-28	34.0
WP_000359412.1\|3175507_3176737_+	peptidase T	NA	NA	NA	NA
WP_023209851.1\|3176740_3178075_+	hypothetical protein	NA	NA	NA	NA
WP_000456514.1\|3178114_3179236_-	[50S ribosomal protein L16]-arginine 3-hydroxylase	NA	NA	NA	NA
WP_001031687.1\|3179316_3180780_-	two-component system sensor histidine kinase PhoQ	NA	NA	NA	NA
WP_001537766.1\|3180779_3181451_-	two-component system response regulator PhoP	NA	NA	NA	NA
WP_000423763.1\|3181577_3182948_-	adenylosuccinate lyase	A0A2H4UUU6	Bodo_saltans_virus	8.5e-109	45.3
WP_001519653.1\|3182951_3183593_-	high frequency lysogenization protein HflD	NA	NA	NA	NA
WP_000004541.1\|3183679_3184786_-\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
WP_023209849.1\|3184839_3185301_-	NUDIX hydrolase	NA	NA	NA	NA
WP_000825956.1\|3185312_3185642_-	DUF1311 domain-containing protein	NA	NA	NA	NA
WP_001249411.1\|3185638_3186304_-	23S rRNA pseudouridine(2457) synthase RluE	NA	NA	NA	NA
WP_023244952.1\|3186475_3187726_+	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	7.4e-19	90.7
WP_000741321.1\|3187839_3188982_-\|integrase	tyrosine-type recombinase/integrase	O21929	Phage_21	1.4e-173	80.0
WP_023244951.1\|3188971_3189208_-	excisionase	NA	NA	NA	NA
WP_000069466.1\|3189257_3189761_-	hypothetical protein	A0A075B8H2	Enterobacteria_phage	6.0e-36	92.3
WP_000066252.1\|3189757_3190090_-	hypothetical protein	S4TNP2	Salmonella_phage	3.0e-20	80.3
WP_001033921.1\|3190082_3190403_-	hypothetical protein	A0A222YY67	Escherichia_phage	3.6e-34	60.2
WP_001126032.1\|3190438_3191269_-	recombination protein RecT	A0A1P8DTF2	Proteus_phage	1.0e-104	72.0
WP_000784710.1\|3191638_3191866_+	DNA breaking-rejoining protein	A0A0M4RU10	Salmonella_phage	2.2e-14	66.7
WP_001097218.1\|3191995_3192685_+	antitermination protein	I6PDF8	Cronobacter_phage	2.1e-60	54.9
WP_001574213.1\|3192781_3193306_+	hypothetical protein	NA	NA	NA	NA
WP_000798706.1\|3193679_3194129_-	lipoprotein	NA	NA	NA	NA
WP_001574215.1\|3194489_3195176_-	PipA/GogA/GtgA family type III secretion system effector	Q9MBM0	Phage_Gifsy-2	1.8e-131	99.6
3194272:3194299	attR	NA	NA	NA	NA
WP_071824250.1\|3195451_3195883_+\|tail	phage tail protein	A5LH39	Enterobacteria_phage	1.0e-28	59.2
WP_000725267.1\|3195972_3196470_+	outer membrane beta-barrel protein	A0A1B0VBR9	Salmonella_phage	1.4e-16	36.6
WP_000877926.1\|3196586_3197120_-	superoxide dismutase [Cu-Zn]	Q9MC02	Salmonella_phage	1.8e-46	54.0
WP_023205989.1\|3197209_3197905_+\|tail	phage minor tail protein L	A0A0K2FJ01	Enterobacteria_phage	1.7e-89	66.7
WP_023205988.1\|3197914_3198652_+\|tail	phage tail protein	A0A0P0ZE89	Stx2-converting_phage	1.2e-114	76.1
WP_001576012.1\|3198549_3199254_+\|tail	tail assembly protein	A5LH42	Enterobacteria_phage	2.4e-67	63.1
WP_038390029.1\|3201353_3201932_+\|tail	tail fiber assembly protein	A0A0M4RTP2	Salmonella_phage	3.1e-89	85.2
WP_058107135.1\|3202028_3202229_-	PagK	NA	NA	NA	NA
WP_077914361.1\|3202402_3202570_+	helix-turn-helix domain-containing protein	S4TTF2	Salmonella_phage	4.6e-09	93.9
WP_023245329.1\|3202741_3203161_+	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	1.9e-35	59.1
WP_023245330.1\|3203163_3204432_+	Y-family DNA polymerase	I6RSM4	Salmonella_phage	7.5e-245	98.8
WP_000334550.1\|3204424_3205096_-	SOS response-associated peptidase	A0A2H4J5W2	uncultured_Caudovirales_phage	1.8e-80	61.3
WP_012218897.1\|3205349_3205562_+	isocitrate dehydrogenase	Q77Z09	Phage_21	2.5e-20	90.7

DBSCAN-SWA_6

3832379 : 3874067

Salmonella_phage(25.0%)

tail,protease,integrase

attL 3861915:3861944|attR 3874203:3874232

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000984498.1\|3832379_3833261_-\|protease	protease HtpX	NA	NA	NA	NA
WP_001091237.1\|3833454_3835503_-	carboxy terminal-processing peptidase	A0A0R6PIZ1	Moraxella_phage	8.0e-87	33.5
WP_000431401.1\|3835522_3836209_-	RNA chaperone ProQ	NA	NA	NA	NA
WP_000145727.1\|3836306_3836891_-	GAF domain-containing protein	NA	NA	NA	NA
WP_001207294.1\|3836932_3838216_+	membrane integrity lipid transport subunit YebS	NA	NA	NA	NA
WP_001521100.1\|3838184_3840818_+	PqiB family protein	NA	NA	NA	NA
WP_001670762.1\|3840895_3842335_+	16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF	NA	NA	NA	NA
WP_024131167.1\|3842452_3842689_+	DUF1480 family protein	NA	NA	NA	NA
WP_000457836.1\|3842799_3842991_+	YebW family protein	NA	NA	NA	NA
WP_023244784.1\|3843009_3843660_-	protein-serine/threonine phosphatase	A0A222YWF0	Escherichia_phage	6.5e-59	51.4
WP_001134857.1\|3843882_3844047_-	hypothetical protein	NA	NA	NA	NA
WP_000182072.1\|3844331_3845054_-	SPI-1 type III secretion system guanine nucleotide exchange factor SopE2	NA	NA	NA	NA
WP_000422890.1\|3845737_3846133_+	DUF1398 domain-containing protein	C6ZCX4	Enterobacteria_phage	8.3e-17	33.6
WP_000030949.1\|3846462_3846939_+	hypothetical protein	NA	NA	NA	NA
WP_000354402.1\|3847311_3847731_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_077914367.1\|3848101_3848371_+	hypothetical protein	Q6UAV5	Klebsiella_phage	4.5e-06	44.4
WP_038390064.1\|3848536_3848677_+	hypothetical protein	NA	NA	NA	NA
WP_001233445.1\|3851592_3852507_+	DMT family transporter	NA	NA	NA	NA
WP_000480735.1\|3852639_3852798_+	hypothetical protein	NA	NA	NA	NA
WP_000848072.1\|3852807_3853422_+	disulfide bond formation protein B	NA	NA	NA	NA
WP_000951652.1\|3853909_3854056_+	hypothetical protein	NA	NA	NA	NA
WP_000457876.1\|3854569_3854695_-	hypothetical protein	NA	NA	NA	NA
WP_001751604.1\|3855264_3855465_+	hypothetical protein	NA	NA	NA	NA
WP_071785322.1\|3855561_3856062_-\|tail	tail fiber assembly protein	A0A0M4RTP2	Salmonella_phage	6.7e-64	78.0
WP_000340812.1\|3858151_3858643_-	DUF1441 family protein	Q9EYD0	Enterobacteria_phage	4.2e-42	56.9
WP_001034748.1\|3858697_3858886_+	hypothetical protein	NA	NA	NA	NA
WP_000789530.1\|3858950_3859118_+	lytic enzyme	NA	NA	NA	NA
WP_001013467.1\|3859960_3860191_-	hypothetical protein	Q8HA86	Salmonella_phage	6.1e-28	93.7
WP_077914368.1\|3860380_3860875_+	RecE	A0A0U2I1R6	Escherichia_phage	2.8e-22	70.3
WP_023244716.1\|3861518_3861788_+\|integrase	tyrosine-type recombinase/integrase	A0A2H4IYC8	uncultured_Caudovirales_phage	4.3e-17	54.0
3861915:3861944	attL	NA	NA	NA	NA
WP_000161704.1\|3864011_3864734_+	SPI-1 type III secretion system guanine nucleotide exchange factor SopE	NA	NA	NA	NA
WP_000143174.1\|3864929_3865505_-\|tail	tail fiber assembly protein	A0A0M4RTP2	Salmonella_phage	1.5e-96	91.0
WP_038390069.1\|3865504_3866956_-\|tail	tail fiber protein	E5G6P0	Salmonella_phage	7.3e-42	70.2
WP_022742713.1\|3866945_3867548_-	DUF2612 domain-containing protein	H9C0Y0	Aeromonas_phage	5.9e-30	43.2
WP_023245088.1\|3867549_3870141_-	DUF1073 domain-containing protein	A0A2R3UAL5	Myoviridae_environmental_samples	2.9e-102	44.2
WP_001126032.1\|3870866_3871697_+	recombination protein RecT	A0A1P8DTF2	Proteus_phage	1.0e-104	72.0
WP_001518052.1\|3872437_3872662_+	hypothetical protein	NA	NA	NA	NA
WP_038390080.1\|3872734_3873007_+	excisionase	A0A2H4J5E1	uncultured_Caudovirales_phage	4.0e-10	39.7
WP_038390082.1\|3872987_3874067_+\|integrase	tyrosine-type recombinase/integrase	A0A2H4IYC8	uncultured_Caudovirales_phage	1.5e-100	51.7
3874203:3874232	attR	NA	NA	NA	NA

DBSCAN-SWA_7

3980286 : 3987555

Morganella_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001157315.1\|3980286_3981717_-	DNA cytosine methyltransferase	E5E3X6	Burkholderia_phage	1.0e-104	57.4
WP_038390093.1\|3981790_3982486_-	phosphohydrolase	A0A1D6Y7U0	Golden_Marseillevirus	2.8e-07	27.1
WP_000107430.1\|3982577_3982877_-	membrane protein	NA	NA	NA	NA
WP_001080675.1\|3983526_3984738_+	porin	Q1MVN1	Enterobacteria_phage	1.3e-108	56.0
WP_024131163.1\|3984998_3985187_-	hypothetical protein	NA	NA	NA	NA
WP_000208509.1\|3985197_3985410_-	cold-shock protein	A0A1W6JNX5	Morganella_phage	3.9e-21	70.0
WP_000457663.1\|3985864_3987133_-	Y-family DNA polymerase	I6RSM4	Salmonella_phage	9.3e-227	91.9
WP_000394197.1\|3987135_3987555_-	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	8.5e-36	60.5

DBSCAN-SWA_8

4103113 : 4113619

Enterobacteria_phage(37.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000126349.1\|4103113_4104427_-	lipopolysaccharide biosynthesis protein RfbH	H8ZJ36	Ostreococcus_tauri_virus	7.0e-52	35.1
WP_000565903.1\|4104453_4105533_-	CDP-glucose 4,6-dehydratase	A0A222YY99	Synechococcus_phage	1.7e-16	24.5
WP_000648784.1\|4105537_4106311_-	glucose-1-phosphate cytidylyltransferase	NA	NA	NA	NA
WP_000018227.1\|4106307_4107300_-	CDP-6-deoxy-delta-3,4-glucoseen reductase	NA	NA	NA	NA
WP_000973709.1\|4107305_4107857_-	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	1.3e-52	58.0
WP_023194347.1\|4107857_4108736_-	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	2.1e-108	65.5
WP_001023658.1\|4108783_4109683_-	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	5.1e-30	36.0
WP_000697846.1\|4109682_4110768_-	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	1.6e-102	53.9
WP_000981469.1\|4111144_4112038_-	GalU regulator GalF	A0A127AW70	Bacillus_phage	4.8e-44	42.2
WP_023209799.1\|4112215_4113619_-	colanic acid biosynthesis protein WcaM	A0A291LBB9	Klebsiella_phage	5.2e-21	27.2

DBSCAN-SWA_9

4181897 : 4191068

Enterobacteria_phage(66.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000195332.1\|4181897_4183931_+\|tRNA	methionine--tRNA ligase	A0A1V0SDF2	Indivirus	1.0e-54	27.6
WP_000703137.1\|4184171_4184630_+	YehR family lipoprotein	Q9EYF5	Enterobacteria_phage	8.4e-53	72.5
WP_023244721.1\|4184801_4185332_+	YehR family lipoprotein	NA	NA	NA	NA
WP_000950413.1\|4185388_4185856_-	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	3.9e-74	90.3
WP_000598637.1\|4185902_4186622_-	two-component system response regulator BtsR	NA	NA	NA	NA
WP_000272845.1\|4186618_4188304_-	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	6.2e-279	91.1
WP_001240418.1\|4188526_4189258_+	HTH-type transcriptional regulator MlrA	Q9EYF2	Enterobacteria_phage	4.5e-101	87.9
WP_001261696.1\|4189317_4189425_+	protein YohO	NA	NA	NA	NA
WP_000824854.1\|4189405_4190137_-	ABC transporter permease	NA	NA	NA	NA
WP_023204661.1\|4190120_4191068_-	ABC transporter ATP-binding protein	F2Y1V5	Organic_Lake_phycodnavirus	6.2e-10	27.4

DBSCAN-SWA_10

4210475 : 4276871

Salmonella_phage(28.57%)

holin,tail,lysis

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000989296.1\|4210475_4211171_+\|lysis	CidB/LrgB family autolysis modulator	NA	NA	NA	NA
WP_000553526.1\|4211324_4212209_+	cytidine deaminase	NA	NA	NA	NA
WP_000920081.1\|4212385_4213105_+	outer membrane permeability protein SanA	NA	NA	NA	NA
WP_000605187.1\|4213101_4213347_+	DUF2542 family protein	NA	NA	NA	NA
WP_001136420.1\|4213551_4214793_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_000956095.1\|4214786_4216022_+	NAD-dependent dihydropyrimidine dehydrogenase subunit PreA	NA	NA	NA	NA
WP_001275101.1\|4216096_4217107_-	galactose/methyl galactoside ABC transporter permease MglC	NA	NA	NA	NA
WP_000535913.1\|4217122_4218643_-	galactose/methyl galactoside ABC transporter ATP-binding protein MglA	F2Y2R6	Organic_Lake_phycodnavirus	1.0e-09	31.9
WP_020437444.1\|4218776_4219775_-	galactose/glucose ABC transporter substrate-binding protein MglB	NA	NA	NA	NA
WP_000628634.1\|4220273_4221296_-	HTH-type transcriptional regulator GalS	NA	NA	NA	NA
WP_001526153.1\|4221445_4222588_-	DUF418 family protein	NA	NA	NA	NA
WP_001139611.1\|4222602_4223271_-	GTP cyclohydrolase I FolE	M1Q6X8	Cellulophaga_phage	4.1e-56	56.3
WP_000425488.1\|4223600_4224458_+	S-formylglutathione hydrolase	NA	NA	NA	NA
WP_000876817.1\|4224446_4224836_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_023245065.1\|4224840_4226208_-	L-serine ammonia-lyase	NA	NA	NA	NA
WP_000022911.1\|4226424_4227312_+	phosphoserine phosphatase SerB	NA	NA	NA	NA
WP_000023807.1\|4227344_4228667_+	MFS transporter	NA	NA	NA	NA
WP_000488254.1\|4228710_4230702_-	catecholate siderophore receptor CirA	A0A0P0I887	Acinetobacter_phage	6.7e-14	37.9
WP_000535000.1\|4231047_4232517_-	lysine-specific permease	NA	NA	NA	NA
WP_000548316.1\|4232706_4233570_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_000137966.1\|4233690_4234740_+	YeiH family protein	NA	NA	NA	NA
WP_000873915.1\|4234818_4235676_+	deoxyribonuclease IV	A0A1V0SBL9	Catovirus	9.9e-23	28.5
WP_023245066.1\|4235740_4237429_-	PTS fructose transporter subunit IIBC	NA	NA	NA	NA
WP_000091249.1\|4237445_4238384_-	1-phosphofructokinase	NA	NA	NA	NA
WP_000487287.1\|4238383_4239514_-	fused PTS fructose transporter subunit IIA/HPr protein	NA	NA	NA	NA
WP_000551937.1\|4239882_4241064_+	sugar efflux transporter SetB	NA	NA	NA	NA
WP_023245232.1\|4241128_4241794_-	hypothetical protein	NA	NA	NA	NA
WP_001519564.1\|4241795_4241918_-	membrane protein	NA	NA	NA	NA
WP_001523448.1\|4242305_4242560_-	YkgJ family cysteine cluster protein	NA	NA	NA	NA
WP_001136822.1\|4242883_4243456_+	elongation factor P-like protein YeiP	NA	NA	NA	NA
WP_000169346.1\|4243668_4244655_+	GTP-binding protein	NA	NA	NA	NA
WP_000178095.1\|4244684_4245404_+	phosphatase PAP2 family protein	NA	NA	NA	NA
WP_000241015.1\|4245817_4246390_+	bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase	A0A1V0DZX6	Clostridioides_phage	8.1e-13	38.9
WP_000957751.1\|4246715_4248272_+	cyclic di-GMP phosphodiesterase	NA	NA	NA	NA
WP_023245230.1\|4248378_4250184_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_000501623.1\|4250193_4251288_+	microcin C ABC transporter permease YejB	NA	NA	NA	NA
WP_001137761.1\|4251287_4252313_+	ABC transporter permease	NA	NA	NA	NA
WP_000203619.1\|4252314_4253904_+	microcin C ABC transporter ATP-binding protein YejF	G9BWD6	Planktothrix_phage	3.2e-19	32.1
WP_001094639.1\|4253907_4254252_-	hypothetical protein	NA	NA	NA	NA
WP_000213349.1\|4254642_4255833_-	Bcr/CflA family multidrug efflux MFS transporter	S4TR35	Salmonella_phage	5.4e-19	22.2
WP_001234836.1\|4255860_4256556_-	16S rRNA pseudouridine(516) synthase RsuA	NA	NA	NA	NA
WP_000578121.1\|4256707_4258468_+	DEAD/DEAH box helicase	M4Q3N1	Vibrio_phage	1.9e-100	41.6
WP_000494192.1\|4258592_4258877_+	50S ribosomal protein L25	NA	NA	NA	NA
WP_000033443.1\|4258985_4259606_-	hypothetical protein	NA	NA	NA	NA
WP_000050806.1\|4259633_4260641_-	nucleoid-associated protein YejK	A0A1V0E8C0	Vibrio_phage	4.5e-83	48.3
WP_001135904.1\|4260820_4261048_+	YejL family protein	NA	NA	NA	NA
WP_000256153.1\|4261079_4262840_+	cardiolipin transport protein PbgA	NA	NA	NA	NA
WP_000806401.1\|4263120_4263624_-	LexA family transcriptional regulator	Q1MVE7	Enterobacteria_phage	9.5e-50	71.3
WP_000884778.1\|4263651_4263942_+	DinI family protein	S4TND2	Salmonella_phage	4.7e-25	83.3
WP_000639473.1\|4264289_4266119_+	acyltransferase	C6ZR20	Salmonella_phage	3.0e-61	29.6
WP_000022213.1\|4266172_4266616_-\|tail	tail fiber assembly protein	A0A0F7LDZ0	Escherichia_phage	1.4e-28	43.9
WP_001215679.1\|4266993_4267521_-\|tail	tail fiber assembly protein	A0A1S6KZZ1	Salmonella_phage	3.1e-11	31.3
WP_000554739.1\|4267523_4268765_-	hypothetical protein	Q8HAB4	Salmonella_phage	1.0e-52	95.3
WP_001120499.1\|4269357_4269687_-\|holin	phage holin, lambda family	Q8SBE1	Shigella_phage	3.9e-36	94.6
WP_000894640.1\|4269983_4271315_+	AAA family ATPase	R9TRQ8	Vibrio_phage	2.1e-19	28.5
WP_010989045.1\|4271343_4271712_-	antitermination protein Q	A5LH77	Enterobacteria_phage	7.4e-52	81.7
WP_024149446.1\|4271726_4272716_-	DUF968 domain-containing protein	A0A1C9IHZ5	Salmonella_phage	1.7e-188	97.0
WP_001115840.1\|4273044_4275411_-	SPI-2 type III secretion system effector E3 ubiquitin transferase SspH2	Q9MBL9	Phage_Gifsy-2	2.9e-72	88.7
WP_001113462.1\|4275579_4275783_-\|tail	tail protein	NA	NA	NA	NA
WP_000624225.1\|4276079_4276871_-\|tail	tail protein	Q1MVL8	Enterobacteria_phage	1.7e-48	31.6

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP007534

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection