CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP007532	Salmonella enterica subsp. enterica serovar Abaetetuba str. ATCC 35640 chromosome, complete genome	3 crisprs	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,WYL,PD-DExK,DEDDh,DinG	1	26	7	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP007532_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP007532_1

166625-167671

TypeI-E

I-E

Consensus_repeat	Method
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRISPRCasFinder
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	PILER-CR
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRISPRCasFinder

16 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

The CRISPR arrays of NZ_CP007532_1

>merge|NZ_CP007532|1|166625-167671|CRISPRCasFinder,CRT,PILER-CR,CRT,CRISPRCasFinder
GTGTTTATCCCCGCTGACGCGGGGAATTATTTTTCAGCCCTTGTCGACTGCGGAACGCCCCTCGGTTTATCCCCGCTGGCGCGGGGAACACCTCCTCGGTAGTTTTCGCTGTGCGCCCGTAAACGGTTTATCCCCGCTGGCGCGGGGAACACGGTTCAGCAGGGTCGAGAGTTGATTCCTCCTGCGGTTTATCCCCGCTGGCGCGGGGAACACGGGCTTGGGCGTCTGGAGGTTGTGGGTATGGCCGGTTTATCCCCGCTGGCGCGGGGAACACGGCTCCCATTTCGCGAGCGCGCTAGCGCTGGCCGGTTTATCCCCGCTGGCGCGGGGAACACCAAGCCGTTTTCCCCCAAGGAGTTGGTGGCGCGGGGAACACTTCTGCAATTCTTTTAGAATCTGCATTAATAGCGGTTTATCCCCGCTGGCGCGGGGAACACAAACAACGAATCGTGCTGGATTTAGAGTTTTCCGGTTTATCCCCGCTGGCGCGGGGAACACAATTATCGAAAGGAACTACTCAAGGGAGAAACCGGTTTATCCCCGCTGGCGCGGGGAACACGCTATTGATTTCCGCCAGCGACAGGTGATCGCCGGTTTATCCCCGCTGGCGCGGGGAACACTTGGTTTTTTAATACTTTCTGGTTGCACTGTTCGGTTTATCCCCGCTGGCGCGGGGAACACTAGGTTATTTAACATATATATAACTATATATTCGGTTTATCCCCGCTGGCGCGGGGAACACTTCAATTCAGCCGATCCGATCCGGTAGTGATACGGTTTATCCCCGCTGGCGCGGGGAACACGTATCAAAAATCTGGGGAGATGAGGGCGCGATCGGTTTATCCCCGCTGGCGCGGGGAACACACCGCCCGCACGCTGACCGGACGCAAGCGACGCGGTTTATCCCCGCTGGCGCGGGGAACACCTGTCCGCAATTTGCATCGTTCCTGACACATCCGGTTTATCCCCGCTGGCGCGGGGAACACCCGTCGTGCTGTTATCCACCACGTCATACCAGCGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP007532|1|1|166625-166960|CRISPRCasFinder
GTGTTTATCCCCGCTGACGCGGGGAATTA	TTTTTCAGCCCTTGTCGACTGCGGAACGCCCCT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CTCCTCGGTAGTTTTCGCTGTGCGCCCGTAAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGTTCAGCAGGGTCGAGAGTTGATTCCTCCTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGGCTTGGGCGTCTGGAGGTTGTGGGTATGGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGCTCCCATTTCGCGAGCGCGCTAGCGCTGGC
CGGTTTATCCCCGCTGGCGCGGGGAACACCAAGCCGTTTTCCCCCAAGGAGTTGGTGGCGCGGGGAACACTTCTGCAATTCTTTTAGAATCTGCATTAATAGCGGTTTATCCCCGCTGGCGCGGGGAACAC	AAACAACGAATCGTGCTGGATTTAGAGTTTTC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AATTATCGAAAGGAACTACTCAAGGGAGAAAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCTATTGATTTCCGCCAGCGACAGGTGATCGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTGGTTTTTTAATACTTTCTGGTTGCACTGTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TAGGTTATTTAACATATATATAACTATATATT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTCAATTCAGCCGATCCGATCCGGTAGTGATA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTATCAAAAATCTGGGGAGATGAGGGCGCGAT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ACCGCCCGCACGCTGACCGGACGCAAGCGACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CTGTCCGCAATTTGCATCGTTCCTGACACATC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CCGTCGTGCTGTTATCCACCACGTCATACCAG


>NZ_CP007532|1|1|166625-166959|CRT
GTGTTTATCCCCGCTGACGCGGGGAATTA	TTTTTCAGCCCTTGTCGACTGCGGAACGCCCCT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CTCCTCGGTAGTTTTCGCTGTGCGCCCGTAAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGTTCAGCAGGGTCGAGAGTTGATTCCTCCTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGGCTTGGGCGTCTGGAGGTTGTGGGTATGGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGCTCCCATTTCGCGAGCGCGCTAGCGCTGGC
CGGTTTATCCCCGCTGGCGCGGGGAACACCAAGCCGTTTTCCCCCAAGGAGTTGGTGGCGCGGGGAACAC	TTCTGCAATTCTTTTAGAATCTGCATTAATAG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AAACAACGAATCGTGCTGGATTTAGAGTTTTC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AATTATCGAAAGGAACTACTCAAGGGAGAAAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCTATTGATTTCCGCCAGCGACAGGTGATCGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTGGTTTTTTAATACTTTCTGGTTGCACTGTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TAGGTTATTTAACATATATATAACTATATATT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTCAATTCAGCCGATCCGATCCGGTAGTGATA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTATCAAAAATCTGGGGAGATGAGGGCGCGAT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ACCGCCCGCACGCTGACCGGACGCAAGCGACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CTGTCCGCAATTTGCATCGTTCCTGACACATC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CCGTCGTGCTGTTATCCACCACGTCATACCAG


>NZ_CP007532|1|1|166687-167671|PILER-CR
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CTCCTCGGTAGTTTTCGCTGTGCGCCCGTAAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGTTCAGCAGGGTCGAGAGTTGATTCCTCCTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGGCTTGGGCGTCTGGAGGTTGTGGGTATGGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGCTCCCATTTCGCGAGCGCGCTAGCGCTGGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CAAGCCGTTTTCCCCCAAGGAGTTGG
TGGCGCGGGGAACACTTCTGCAATTCTTT	TAGAATCTGCATTAATAGCGGTTTATCCCCGC
TGGCGCGGGGAACACAAACAACGAATCGT	GCTGGATTTAGAGTTTTCCGGTTTATCCCCGC
TGGCGCGGGGAACACAATTATCGAAAGGA	ACTACTCAAGGGAGAAACCGGTTTATCCCCGC
TGGCGCGGGGAACACGCTATTGATTTCCG	CCAGCGACAGGTGATCGCCGGTTTATCCCCGC
TGGCGCGGGGAACACTTGGTTTTTTAATA	CTTTCTGGTTGCACTGTTCGGTTTATCCCCGC
TGGCGCGGGGAACACTAGGTTATTTAACA	TATATATAACTATATATTCGGTTTATCCCCGC
TGGCGCGGGGAACACTTCAATTCAGCCGA	TCCGATCCGGTAGTGATACGGTTTATCCCCGC
TGGCGCGGGGAACACGTATCAAAAATCTG	GGGAGATGAGGGCGCGATCGGTTTATCCCCGC
TGGCGCGGGGAACACACCGCCCGCACGCT	GACCGGACGCAAGCGACGCGGTTTATCCCCGC
TGGCGCGGGGAACACCTGTCCGCAATTTG	CATCGTTCCTGACACATCCGGTTTATCCCCGC
TGGCGCGGGGAACACCCGTCGTGCTGTTA	TCCACCACGTCATACCAGCGGTTTATCCCCGC
TGGCGCGGGGAACAC

>NZ_CP007532|1|2|166972-167671|CRT
	TTTTTCAGCCCTTGTCGACTGCGGAACGCCCCT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CTCCTCGGTAGTTTTCGCTGTGCGCCCGTAAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGTTCAGCAGGGTCGAGAGTTGATTCCTCCTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGGCTTGGGCGTCTGGAGGTTGTGGGTATGGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGCTCCCATTTCGCGAGCGCGCTAGCGCTGGC
CGGTTTATCCCCGCTGGCGCGGGGAACACCAAGCCGTTTTCCCCCAAGGAGTTGGTGGCGCGGGGAACAC	TTCTGCAATTCTTTTAGAATCTGCATTAATAG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AAACAACGAATCGTGCTGGATTTAGAGTTTTC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AATTATCGAAAGGAACTACTCAAGGGAGAAAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCTATTGATTTCCGCCAGCGACAGGTGATCGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTGGTTTTTTAATACTTTCTGGTTGCACTGTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TAGGTTATTTAACATATATATAACTATATATT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTCAATTCAGCCGATCCGATCCGGTAGTGATA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTATCAAAAATCTGGGGAGATGAGGGCGCGAT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ACCGCCCGCACGCTGACCGGACGCAAGCGACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CTGTCCGCAATTTGCATCGTTCCTGACACATC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CCGTCGTGCTGTTATCCACCACGTCATACCAG
CGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP007532|1|2|167033-167671|CRISPRCasFinder
	TTTTTCAGCCCTTGTCGACTGCGGAACGCCCCT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CTCCTCGGTAGTTTTCGCTGTGCGCCCGTAAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGTTCAGCAGGGTCGAGAGTTGATTCCTCCTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGGCTTGGGCGTCTGGAGGTTGTGGGTATGGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGCTCCCATTTCGCGAGCGCGCTAGCGCTGGC
CGGTTTATCCCCGCTGGCGCGGGGAACACCAAGCCGTTTTCCCCCAAGGAGTTGGTGGCGCGGGGAACACTTCTGCAATTCTTTTAGAATCTGCATTAATAGCGGTTTATCCCCGCTGGCGCGGGGAACAC	AAACAACGAATCGTGCTGGATTTAGAGTTTTC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AATTATCGAAAGGAACTACTCAAGGGAGAAAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCTATTGATTTCCGCCAGCGACAGGTGATCGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTGGTTTTTTAATACTTTCTGGTTGCACTGTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TAGGTTATTTAACATATATATAACTATATATT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTCAATTCAGCCGATCCGATCCGGTAGTGATA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTATCAAAAATCTGGGGAGATGAGGGCGCGAT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ACCGCCCGCACGCTGACCGGACGCAAGCGACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CTGTCCGCAATTTGCATCGTTCCTGACACATC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CCGTCGTGCTGTTATCCACCACGTCATACCAG
CGGTTTATCCCCGCTGGCGCGGGGAACAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP007532.1\|WP_000372384.1\|164404_165313_-\|sulfate-adenylyltransferase-subunit-CysD	unknown	unknown	gnl\|CDD\|235375
NZ_CP007532.1\|WP_023262715.1\|167776_168061_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	pfam09707_cas2_CAS-I-E	gnl\|CDD\|236930
NZ_CP007532.1\|WP_001173659.1\|162363_162969_-\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|179661
NZ_CP007532.1\|WP_001219244.1\|160279_160759_-\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851
NZ_CP007532.1\|WP_023262713.1\|169609_170356_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187776
NZ_CP007532.1\|WP_000144832.1\|168060_168981_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NZ_CP007532.1\|WP_023262712.1\|173563_176227_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_CP007532.1\|WP_000517480.1\|161487_161799_-\|cell-division-protein-FtsB	unknown	unknown	gnl\|CDD\|179156
NZ_CP007532.1\|WP_023262714.1\|168977_169628_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|273869
NZ_CP007532.1\|WP_001221538.1\|158491_159253_-\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732
NZ_CP007532.1\|WP_000490473.1\|165563_166610_+\|aminopeptidase	unknown	unknown	gnl\|CDD\|182299
NZ_CP007532.1\|WP_023254081.1\|162955_164395_-\|sulfate-adenylyltransferase-subunit-CysN	unknown	unknown	gnl\|CDD\|235349
NZ_CP007532.1\|WP_001645981.1\|171995_173552_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
NZ_CP007532.1\|WP_001145535.1\|176670_177624_+\|SPI-1-type-III-secretion-system-effector-SopD	unknown	unknown	gnl\|CDD\|185277
NZ_CP007532.1\|WP_000134246.1\|159233_160283_-\|tRNA-pseudouridine(13)-synthase-TruD	unknown	unknown	gnl\|CDD\|234884
NZ_CP007532.1\|WP_023262716.1\|160758_161469_-\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
NZ_CP007532.1\|WP_001645980.1\|170366_171425_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|273843
NZ_CP007532.1\|WP_000029525.1\|171438_171999_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|187862
NZ_CP007532.1\|WP_023136478.1\|177711_178446_-\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NZ_CP007532.1\|WP_001537530.1\|161989_162313_-\|DUF3561-family-protein	unknown	unknown	gnl\|CDD\|371891

Protein	Function_ID	Function_description	E-value
NZ_CP007532.1\|WP_000372384.1\|164404_165313_-\|sulfate-adenylyltransferase-subunit-CysD	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
NZ_CP007532.1\|WP_023262715.1\|167776_168061_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	4.00023e-63
NZ_CP007532.1\|WP_001173659.1\|162363_162969_-\|adenylyl-sulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	3.2499e-145
NZ_CP007532.1\|WP_001219244.1\|160279_160759_-\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	1.27909e-104
NZ_CP007532.1\|WP_023262713.1\|169609_170356_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	2.24094e-48
NZ_CP007532.1\|WP_000144832.1\|168060_168981_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	1.21084e-157
NZ_CP007532.1\|WP_023262712.1\|173563_176227_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	0
NZ_CP007532.1\|WP_000517480.1\|161487_161799_-\|cell-division-protein-FtsB	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	1.08865e-64
NZ_CP007532.1\|WP_023262714.1\|168977_169628_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|273869	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1974 from Chlorobium tepidum, is found in the Ecoli subtype of CRISPR/Cas regions and is designated Cse3 (CRISPR/Cas Subtype Ecoli protein 3). The representative of this family from Thermus thermophilus HB8 (TTHB192) has been crystallized and found to have a structure consisting of two domains with opposing parallel beta-sheets known as a beta-sheet platform. This structure is similar to those found in the Sex-lethal protein and poly(A)-binding protein. This structure is consistent with an RNA-binding function.	4.47918e-76
NZ_CP007532.1\|WP_001221538.1\|158491_159253_-\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	1.7078e-146
NZ_CP007532.1\|WP_000490473.1\|165563_166610_+\|aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
NZ_CP007532.1\|WP_023254081.1\|162955_164395_-\|sulfate-adenylyltransferase-subunit-CysN	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
NZ_CP007532.1\|WP_001645981.1\|171995_173552_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	0
NZ_CP007532.1\|WP_001145535.1\|176670_177624_+\|SPI-1-type-III-secretion-system-effector-SopD	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0
NZ_CP007532.1\|WP_000134246.1\|159233_160283_-\|tRNA-pseudouridine(13)-synthase-TruD	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
NZ_CP007532.1\|WP_023262716.1\|160758_161469_-\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	2.16406e-119
NZ_CP007532.1\|WP_001645980.1\|170366_171425_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	1.82029e-133
NZ_CP007532.1\|WP_000029525.1\|171438_171999_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	9.44512e-33
NZ_CP007532.1\|WP_023136478.1\|177711_178446_-\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	8.84882e-138
NZ_CP007532.1\|WP_001537530.1\|161989_162313_-\|DUF3561-family-protein	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	3.31009e-48

>NZ_CP007532.1|WP_000490473.1|165563_166610_+|aminopeptidase
MFSATRRFAVILALGVGFILPAQAASPEPGEIANTQARHIATFFPGRMTGSPAEMLSADYLRQQFTQMGYQSDIRTFNSRFIYTTKDNRKNWHNVTGSTVIAAHEGRVPQQIIIMAHLDTYAPQSDADVDANLGGLTLQGMDDNAAGLGVMLELAARLKDIPTHYGIRFIATSGEEEGKLGAENLLKRMSDAEKKNTLLVINLDNLIVGDKLYFNSGKNTPEAVRTLTRDRALAIARRYGIAANTNPGRNPSYPKGTGCCNDAEVFDKAGISVLSVEATNWNLGKKDGYQQRVKNASFPNGNSWHDVRLDNQQHIDKALPGRIERRSRDVVRIMLPLVKELAKAEKTS
>NZ_CP007532.1|WP_000372384.1|164404_165313_-|sulfate-adenylyltransferase-subunit-CysD
MDQKRLTHLRQLEAESIHIIREVAAEFANPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYAFRDRTANAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWRNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMVDDDRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESHAQTLPEIIEEMLVSTTSERQGRMIDRDQAGSMELKKRQGYF
>NZ_CP007532.1|WP_023254081.1|162955_164395_-|sulfate-adenylyltransferase-subunit-CysN
MNTILAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTLQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYREETFARIREDYLTFAEQLPGDLDIRFVPLSALEGDNVAAQSANMRWYSGPTLLEVLETVDIQRAVDRQPMRFPVQYVNRPNLDFRGYAGTLASGSVKVGERIKVLPSGVESSVARIVTFDGDKEEACAGEAITLVLNDDIDISRGDLLLAANETLAPARHAAIDVVWMAEQPLAPGQSYDVKLAGKKTRARIEAIRYQVDINNLTQRDVESLPLNGIGLVEMTFDEPLALDIYQQNPVTGGLIFIDRLSNVTVGAGMVRELDERGATPPVEYSAFELELNALVRRHFPHWDARDLLGDKHGAA
>NZ_CP007532.1|WP_001173659.1|162363_162969_-|adenylyl-sulfate-kinase
MALHDENVVWHSHPVTVAAREQLHGHRGVVLWFTGLSGSGKSTVAGALEEALHHRGVSTYLLDGDNVRHGLCRDLGFSDADRQENIRRVGEVASLMADAGLIVLTAFISPHRAERQLVKERVGHDRFIEIYVNTPLAICEQRDPKGLYKKARAGELRNFTGIDAIYEAPDSPQVHLNGEQLVTNLVSQLLDLLRRRDIIRS
>NZ_CP007532.1|WP_001537530.1|161989_162313_-|DUF3561-family-protein
MRNSHNITFTRSDAFMVDDDATSAFPGAVVGFVSWLLALGIPFLLYGPNTLFFFLYTWPFFLALMPVSVIIGIALHLLVKGKILFSIMFTLLAVGALFGALFIWLLG
>NZ_CP007532.1|WP_000517480.1|161487_161799_-|cell-division-protein-FtsB
MGKLTLLLLALLVWLQYSLWFGKNGIHDYSRVNDDVVAQQATNAKLKARNDQLFAEIDDLNGGQEAIEERARNELSMTKPGETFYRLVPDASKRAATAGQTHR
>NZ_CP007532.1|WP_023262716.1|160758_161469_-|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MAATLLDVCAVVPAAGFGRRMQTECPKQYLSIGNKTILEHSVHALLAHPRVTRVVIAISPGDHRFAQLPLANHPQITVVDGGNERADSVLAGLQAVAKAQWVLVHDAARPCLHQDDLARLLTISENSRVGGILASPVRDTMKRGEPGKNAIAHTVERADLWHALTPQFFPRELLHDCLARALNEGATITDEASALEYCGFHPALVEGRADNIKVTRPEDLALAEFYLTRTIHQEKA
>NZ_CP007532.1|WP_001219244.1|160279_160759_-|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLMKAAK
>NZ_CP007532.1|WP_000134246.1|159233_160283_-|tRNA-pseudouridine(13)-synthase-TruD
MTEFDNLTWLHGKPQGSGLLKANPEDFVVVEDLGFTPDGEGEHILLRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDFSAFQLEGCKVLEYARHKRKLRLGALKGNAFTLVLREISDRRDVETRLQAIRDGGVPNYFGAQRFGIGGSNLQGALRWAQSNAPVRDRNKRSFWLSAARSALFNQIVHQRLKKPDFNQVVDGDALQLAGRGSWFVATSEELPELQRRVDEKELMITASLPGSGEWGTQRAALAFEQDAIAQETVLQSLLLREKVEASRRAMLLYPQQLSWNWWDDVTVELRFWLPAGSFATSVVRELINTMGDYAHIAE
>NZ_CP007532.1|WP_001221538.1|158491_159253_-|5'/3'-nucleotidase-SurE
MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFDNGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLNGYQHYDTAAAVTCALLRGLSREPLRTGRILNVNVPDLPLAQVKGIRVTRCGSRHPADKVIPQEDPRGNTLYWIGPPGDKYDAGPDTDFAAVDEGYVSVTPLHVDLTAHSAHDVVSDWLDSVGVGTQW
>NZ_CP007532.1|WP_023262715.1|167776_168061_-|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MSMVVVVTENVPPRLRGRLAVWLLEIRAGVYVGDTSKRIREMIWQQITQLGGCGNAVMAWATNTESGFEFQTWGENRRIPVDLDGLRLVSFLPV
>NZ_CP007532.1|WP_000144832.1|168060_168981_-|type-I-E-CRISPR-associated-endonuclease-Cas1
MTFVPLNPIPLKDRTSMIFLQYGQIDVLDGAFVLIDKTGIRTHIPVGSVACIMLEPGTRVSHAAVRLASTVGTLLVWVGEAGVRVYSSGQPGGARADKLLYQAKLALDDDLRLKVVRKMYELRFREPPPARRSVEQLRGIEGSRVRATYALLAKQYGVKWHGRNYDPKDWEKGDVVNRCISAATSCLYGISEAAILAAGYAPAIGFIHSGKPLSFVYDIADIIKFESVVPKAFEIAARHPAEPDKEVRLACRDIFRSSKLTGKLIPLIEEVLAAGEIEPPQPAPDMLPPAIPEPESLGDSGHRGHG
>NZ_CP007532.1|WP_023262714.1|168977_169628_-|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSRITLHTSELSPAQLLHLVERGEYVMHQWLWDLFPGGKERQFLYRREELQGAFRFFVLSQEQPAASAIFDVQTRPFAPTLSAGQTLRFNLRANPTVCKNGKRHDLLMEAKRQRKTQGDSQDIWSYQQQAALEWLVRQGEQNGFTLREASVDAYRQQQIRREKDRQMIQFSSVDYTGVLVINDPALFLQRLSQGYGKSRAFGCGMMMIKPGDDA
>NZ_CP007532.1|WP_023262713.1|169609_170356_-|type-I-E-CRISPR-associated-protein-Cas5/CasD
MSQYLVFQLHGPMASWGVDAPGEVRHSHELPSRSALLGLLAAALGIRRDEEERLNAFNRHYQFLLCASGNPRWARDYHTMQMPKEVRKARYFSRREELQDPELLSALISRRDYYTDAWWMIAVSATPDAPYTLAQLQAALQHPVFPLYLGRKSHPLALPLAPQLLEGRAPDALREAYRQYQDQFNALKLPLPRLQNECWWEGEHDGLTANKILRRRDMPLSRQQWLFGERSVNQGPWLSKEDACISQE
>NZ_CP007532.1|WP_001645980.1|170366_171425_-|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTTFIQLHLLTAYPASNLNRDDTGAPKTVVLGGATRLRISSQSLKRAWRTSELFEQALAGNIGIRSGRIAREAAQILIESGIDAKKAVEYVKNIANCFGKVKEDKKPKDELTNAETEQLVHISPAEFEAVKALARRLAEEKRPATEEEAELLRHDRMAVDIAMFGRMLAKKTDFNVEAACQVAHAFGVSETIVEDDFFTAVDDLRQASAEDAGAGHLGETGFGSALFYTYICIDKDLLVKNLNGNEELANKTLRAFTEAALKVSPTGKQNSFASRAYASWALAEKGTDQPRSLAAAFYEPINGTDQLNVAVKRITSLHKNMNKVYGQRTDTASFDVMNQQGSMKDVLDFICA
>NZ_CP007532.1|WP_000029525.1|171438_171999_-|type-I-E-CRISPR-associated-protein-Cse2/CasB
MSIVQEDHKATLRKWHEDLQEKRGARASLRRSKTVNEACLSEGFHLLLMQTHSLWKNKAAWHVTALAITAVLAAHIKFIDGRQSFATQLGQKKSGDNPVMSKLRFSRLSAVKTPDELLRQLRRAVQLLDGSVNLISLAEDIFRWCQEQDDLLSHHRRQQRPTEFLRIRWALEYYQAGDGDIDNEQD
>NZ_CP007532.1|WP_001645981.1|171995_173552_-|type-I-E-CRISPR-associated-protein-Cse1/CasA
MDNFSLLTTPWLPVRFKDGSTGKLAPVNLADENVVDIAATRADLQGAAWQFLLGLLQCSIVPKRYKNWEDIWFDGLHADALHKALAQLEHAFQFGAETPSFMQDFEPLTGEKVSIASLLPEIPGAQTTKFNKDHFIKRGVTERFCPHCAALALFSLQLNAPAGGKGYRTGLRGGGPLTTLVELQEYQGERQTPLWRKLWLNVMPQDVADLPLSDQCDAAVFPWLAATRTSEQANAVTTPDQVDKLQAYWGMPRRIRLDFATLQSGCCDICGAESDELLGFMTVKNYGVNYDGWRHPLTPYRAPVKDQNAFFSVKPQPGGLIWRDWLGLSQNNQTEANYESPAQVVKVFNARRLRDVKAGVWGFGADFDNMKIRCWYEHHFPLLMTEGLIPDLRKATQTATRLLSLLRGALKEAWFANAKDARGDFSFIDIDFWNLTQGRFLNLIHDLENGHKPDERLNKWQRELWLFTRCYFDDHVFTNPYESSDLERIMKARKKYFTSSAEKQSAKAAKAKKQEAAE
>NZ_CP007532.1|WP_023262712.1|173563_176227_-|CRISPR-associated-helicase/endonuclease-Cas3
MSIYHYWGKSRRGEIDGGDDYHLLCWHSLDVAAVGYWMVINNIYFIDHYLKKLGIQDKEQAAQFFAWILCWHDIGKFAHSFQQLYRHEALNIFNEPTRHYEKIAHTTLGYVLWNSWLSECPELFPPSSLSVRKSKRVMALWMPVTTGHHGRPPEAIQELDHFRQQDKDAARDFLLRIKALFPLITLPESWDEDEGIDQFQQLSWFISAAVVLADWTGSASRYFPRTAEKMPVDTYWQQALAKAQTAITLFPSAANVSAFTGIETLFPFIQHPTPLQQKALELDINVDGAQLFILEDVTGAGKTEAALILAHRLMAAGKAQGLYFGLPTMATANAMFERMANTWLALYQPDSRPSLILAHSARRLMDRFNQSIWSVTLSGTEEPDEAQPDSQGCAAWFADSNKKALLAEVGVGTLDQAMMAVMPFKHNNLRLLGLSNKILLADEIHACDAWMSRILEGLIERQASNGNATILLSATLSQQQRDKLVAAFSRGVRRSVQAPLLGHDDYPWLTQVTQTELISQRVDTRKEVERSVDIGWLHSEEACLERIGEAVEKGNCIAWIRNSVDDAIRIYRQLQLSKVVATENLLLFHSRFAFHDRQRIESQTLNLFGKQSGAQRAGKVIIATQVIEQSLDIDCDEMISDLAPVDLLIQRAGRLQRHIRDRNGLVKKSGQDERETPVLRILAPEWDDAPRENWLSSAMRNSAYVYPDHGRMWLTQRILREQGTIRMPQSARLLIESVYGEDVNMPVGFAKTEQLQKGKFYCDRAFARQMLLNFASGYCAEISDSLPEKMSTRLAEESVTLWLAKIVDGVVTPYASGEHAWEMSVLRVRQSWWDKHKDEFEKLDGEPLRKWCAQQYQDKDFATVIVVTDCAACGYSANEGLIGMMGE
>NZ_CP007532.1|WP_001145535.1|176670_177624_+|SPI-1-type-III-secretion-system-effector-SopD
MPVTLSFGNHQNYTLNESRLAHLLSADKEKAIHMGGWDKVQDHFRAEKKDHALEVLHSIIHGQGRGEPGEMEVNVEDINKIYAFKRLQHLACPAHQDLFTIKLDASQTQFLLMVGDTVISQSNIKDILNISDDAVIESMSREERQLFLQICEVIGAKMTWHPELLQESISTLRKEVTGNAQIKTAVYEMMRPAEAPDHPLVEWQDLLTADEKSMLACINAGNFEPTTQFCKIGYQEVQGEVAFSMMHPCISYLLHSYSPFAEFKPTNSGFLKKLNQDYNDYHAKKMFIDVILEKLYLTHERSLHIGKDGCSRNILLT
>NZ_CP007532.1|WP_023136478.1|177711_178446_-|phosphoadenosine-phosphosulfate-reductase
MSQLDLNALNELPKVDRVLALAETNAQLETLTAEERVVWALENLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNDINKVEPMNRALKELKAQTWFAGLRREQSGSRAHLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG

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Crispr_ID: NZ_CP007532_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP007532_2

183816-184637

TypeI-E

I-E

Consensus_repeat	Method
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRISPRCasFinder
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	PILER-CR

13 spacers

cas3,cas8e,cse2gr11,cas7

The CRISPR arrays of NZ_CP007532_2

>merge|NZ_CP007532|2|183816-184637|CRISPRCasFinder,CRT,PILER-CR
ACGGCTATCCCCGCTGGCGCGGGGAACACGTTACCGTTGGCGTAACGCTGAATTGTTGGTACGGTTTATCCCCGCTGACGCGGGGAACACACGGCAACGGATGCGACCGCCAGCGCGATCCCCGGTTTATCCCCGCTGGCGCGGGGAACACGTATCCTGCCCGGGCACTGTTGGTTCGACGCCCGGTTTATCCCCGCTGGCGCGGGGAACACGCTCATCCTGTCGGCGTTTGCCATGTCTAAAACGGTTTATCCCCGCTGGCGCGGGGAACACCTGGTCCTGTTCGCACTGATAAACGCCGTCGCCGGTTTATCCCCGCTGGCGCGGGGAACACTGAATTGGCCGGACTAACCGTACCTGCGAAACCGGTTTATCCCCGCTGGCGCGGGGAACACGACGGACTGGAAAAACTCATCATTTCTGAAGACGGTTTATCCCCGCTGGCGCGGGGAACACAGTTGCGCGATATGCTCACGCTGTTTGTCAGTCGGTTTATCCCCGCTGGCGCGGGGAACACATTCCCGGCGTTGATTGTTGTACCGTGGACGGCGGTTTATCCCCGCTGGCGCGGGGAACACAGCGGCGCAGACACTGTTCCAGCCCGCGACCACGGTTTATCCCCGCTGGCGCGGGGAACACAAACAGGCCGCCTGATCCCCGTTAACGGATCTCGGTTTATCCCCGCTGGCGCGGGGAACACGATATTACCAATTTTTTCATACTACTGCTCTCCGGTTTATCCCCGCTGGCGCGGGGAACACTGCCTGATAATAAGTGTGTCTCCTGGTTCTGGCGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP007532|2|3|183816-184637|CRISPRCasFinder
ACGGCTATCCCCGCTGGCGCGGGGAACAC	GTTACCGTTGGCGTAACGCTGAATTGTTGGTA
CGGTTTATCCCCGCTGACGCGGGGAACAC	ACGGCAACGGATGCGACCGCCAGCGCGATCCC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTATCCTGCCCGGGCACTGTTGGTTCGACGCC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCTCATCCTGTCGGCGTTTGCCATGTCTAAAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CTGGTCCTGTTCGCACTGATAAACGCCGTCGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGAATTGGCCGGACTAACCGTACCTGCGAAAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GACGGACTGGAAAAACTCATCATTTCTGAAGA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGTTGCGCGATATGCTCACGCTGTTTGTCAGT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATTCCCGGCGTTGATTGTTGTACCGTGGACGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGCGGCGCAGACACTGTTCCAGCCCGCGACCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AAACAGGCCGCCTGATCCCCGTTAACGGATCT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GATATTACCAATTTTTTCATACTACTGCTCTC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGCCTGATAATAAGTGTGTCTCCTGGTTCTGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP007532|2|3|183816-184637|CRT
ACGGCTATCCCCGCTGGCGCGGGGAACAC	GTTACCGTTGGCGTAACGCTGAATTGTTGGTA
CGGTTTATCCCCGCTGACGCGGGGAACAC	ACGGCAACGGATGCGACCGCCAGCGCGATCCC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTATCCTGCCCGGGCACTGTTGGTTCGACGCC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCTCATCCTGTCGGCGTTTGCCATGTCTAAAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CTGGTCCTGTTCGCACTGATAAACGCCGTCGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGAATTGGCCGGACTAACCGTACCTGCGAAAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GACGGACTGGAAAAACTCATCATTTCTGAAGA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGTTGCGCGATATGCTCACGCTGTTTGTCAGT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATTCCCGGCGTTGATTGTTGTACCGTGGACGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGCGGCGCAGACACTGTTCCAGCCCGCGACCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AAACAGGCCGCCTGATCCCCGTTAACGGATCT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GATATTACCAATTTTTTCATACTACTGCTCTC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGCCTGATAATAAGTGTGTCTCCTGGTTCTGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP007532|2|2|183877-184637|PILER-CR
CGGTTTATCCCCGCTGACGCGGGGAACAC	ACGGCAACGGATGCGACCGCCAGCGCGATCCC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTATCCTGCCCGGGCACTGTTGGTTCGACGCC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCTCATCCTGTCGGCGTTTGCCATGTCTAAAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CTGGTCCTGTTCGCACTGATAAACGCCGTCGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGAATTGGCCGGACTAACCGTACCTGCGAAAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GACGGACTGGAAAAACTCATCATTTCTGAAGA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGTTGCGCGATATGCTCACGCTGTTTGTCAGT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATTCCCGGCGTTGATTGTTGTACCGTGGACGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGCGGCGCAGACACTGTTCCAGCCCGCGACCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AAACAGGCCGCCTGATCCCCGTTAACGGATCT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GATATTACCAATTTTTTCATACTACTGCTCTC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGCCTGATAATAAGTGTGTCTCCTGGTTCTGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP007532.1\|WP_023207770.1\|190556_190853_-\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	unknown	unknown	gnl\|CDD\|226194
NZ_CP007532.1\|WP_001645981.1\|171995_173552_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
NZ_CP007532.1\|WP_023262708.1\|193546_194842_-\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	unknown	unknown	gnl\|CDD\|237291
NZ_CP007532.1\|WP_001290665.1\|178521_180234_-\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	unknown	unknown	gnl\|CDD\|237402
NZ_CP007532.1\|WP_001645993.1\|182920_183718_-\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|224158
NZ_CP007532.1\|WP_000480218.1\|190818_191175_-\|type-II-toxin-antitoxin-system-ParD-family-antitoxin	unknown	unknown	gnl\|CDD\|226136
NZ_CP007532.1\|WP_000706486.1\|197699_198842_-\|glycerate-kinase	unknown	unknown	gnl\|CDD\|224840
NZ_CP007532.1\|WP_023207771.1\|191245_193495_-\|GTP-diphosphokinase	unknown	unknown	gnl\|CDD\|182797
NZ_CP007532.1\|WP_023262712.1\|173563_176227_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_CP007532.1\|WP_023262709.1\|180233_182033_-\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	unknown	unknown	gnl\|CDD\|182862
NZ_CP007532.1\|WP_023136478.1\|177711_178446_-\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NZ_CP007532.1\|WP_000186399.1\|194899_197656_+\|two-component-sensor-histidine-kinase-BarA	unknown	unknown	gnl\|CDD\|236848
NZ_CP007532.1\|WP_001145535.1\|176670_177624_+\|SPI-1-type-III-secretion-system-effector-SopD	unknown	unknown	gnl\|CDD\|185277
NZ_CP007532.1\|WP_023207769.1\|188986_189787_-\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
NZ_CP007532.1\|WP_000210864.1\|187121_188759_-\|CTP-synthase-(glutamine-hydrolyzing)	unknown	unknown	gnl\|CDD\|235437
NZ_CP007532.1\|WP_001199961.1\|184933_185605_-\|7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|275126
NZ_CP007532.1\|WP_000029525.1\|171438_171999_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|187862
NZ_CP007532.1\|WP_000036734.1\|185740_187039_-\|phosphopyruvate-hydratase	unknown	unknown	gnl\|CDD\|234617
NZ_CP007532.1\|WP_001645980.1\|170366_171425_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|273843
NZ_CP007532.1\|WP_000108313.1\|182468_182831_+\|6-carboxytetrahydropterin-synthase-QueD	unknown	unknown	gnl\|CDD\|238264

Protein	Function_ID	Function_description	E-value
NZ_CP007532.1\|WP_023207770.1\|190556_190853_-\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	gnl\|CDD\|226194	COG3668, ParE, Plasmid stabilization system protein [General function prediction only].	2.60357e-11
NZ_CP007532.1\|WP_001645981.1\|171995_173552_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	0
NZ_CP007532.1\|WP_023262708.1\|193546_194842_-\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	gnl\|CDD\|237291	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD.	0
NZ_CP007532.1\|WP_001290665.1\|178521_180234_-\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0
NZ_CP007532.1\|WP_001645993.1\|182920_183718_-\|MBL-fold-metallo-hydrolase	gnl\|CDD\|224158	COG1237, COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only].	2.61116e-101
NZ_CP007532.1\|WP_000480218.1\|190818_191175_-\|type-II-toxin-antitoxin-system-ParD-family-antitoxin	gnl\|CDD\|226136	COG3609, COG3609, Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain [Transcription].	6.12601e-20
NZ_CP007532.1\|WP_000706486.1\|197699_198842_-\|glycerate-kinase	gnl\|CDD\|224840	COG1929, COG1929, Glycerate kinase [Carbohydrate transport and metabolism].	0
NZ_CP007532.1\|WP_023207771.1\|191245_193495_-\|GTP-diphosphokinase	gnl\|CDD\|182797	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional.	0
NZ_CP007532.1\|WP_023262712.1\|173563_176227_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	0
NZ_CP007532.1\|WP_023262709.1\|180233_182033_-\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	gnl\|CDD\|182862	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit.	0
NZ_CP007532.1\|WP_023136478.1\|177711_178446_-\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	8.84882e-138
NZ_CP007532.1\|WP_000186399.1\|194899_197656_+\|two-component-sensor-histidine-kinase-BarA	gnl\|CDD\|236848	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional.	0
NZ_CP007532.1\|WP_001145535.1\|176670_177624_+\|SPI-1-type-III-secretion-system-effector-SopD	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0
NZ_CP007532.1\|WP_023207769.1\|188986_189787_-\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	5.29055e-158
NZ_CP007532.1\|WP_000210864.1\|187121_188759_-\|CTP-synthase-(glutamine-hydrolyzing)	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
NZ_CP007532.1\|WP_001199961.1\|184933_185605_-\|7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	1.43874e-155
NZ_CP007532.1\|WP_000029525.1\|171438_171999_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	9.44512e-33
NZ_CP007532.1\|WP_000036734.1\|185740_187039_-\|phosphopyruvate-hydratase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
NZ_CP007532.1\|WP_001645980.1\|170366_171425_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	1.82029e-133
NZ_CP007532.1\|WP_000108313.1\|182468_182831_+\|6-carboxytetrahydropterin-synthase-QueD	gnl\|CDD\|238264	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS). Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids, as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after uptake by a carrier-mediated active transport system. Most microbes and plants lack this system and must synthesize folates de novo from guanosine triphosphate. One enzyme from this pathway is PTPS which catalyzes the conversion of dihydroneopterin triphosphate to 6-pyruvoyl tetrahydropterin. The functional enzyme is a hexamer of identical subunits.	2.78454e-58

>NZ_CP007532.1|WP_001645993.1|182920_183718_-|MBL-fold-metallo-hydrolase
MALRIRVLLENHKGAGADKSLKARPGLSLLVEDESTSILFDTGPDGSFMQNASAMGIDLSDVSAVVLSHGHYDHCGGVPWLPDNSRIICHPDIARERYAAMTFLGITRKIKKLSREVDYSRYRMMYTRDPLPIGENFIWSGEISVVAPEAYGIFGGHDAEPDSILDEGVLIYQSAKGLVIITGCGHRGIANIVRHCQNITGIKQIYALIGGFHLRCASPFTLWRVRRFLQEQKPEKLCGCHCTGAWGRLWLPEITAPATGDVLRF
>NZ_CP007532.1|WP_000108313.1|182468_182831_+|6-carboxytetrahydropterin-synthase-QueD
MSTTLYKDFTFEAAHRLPHVPEGHKCGRLHGHSFMVRLEITGEVDPHTGWIMDFADLKAAFKPTYDRLDHYYLNDIPGLSNPTSEVLAKWIWDQVKPVVPLLSAVMVKETCTAGCVYRGE
>NZ_CP007532.1|WP_023262709.1|180233_182033_-|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit
MTTPAPLTGLLPLNPEQLARLQAATTDLTPEQLAWVSGYFWGVLNPRSGAVAVTPVPERKMLGVTLISASQTGNARRVAEALRDDLLAANLNVTLVNAGDYKFKQIASEKLLVIVTSTQGEGEPPEEAVALHKFLFSKKAPKLTDTAFAVFSLGDTSYEFFCQSGKDFDSKLAELGGERLLDRVDADVEYQAAASEWRARVVDVLKSRAPVAAPSQSVATGAVNDIHTSPYTKDAPLTATLAVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPDLVKELVELLWLKGDEPVTVDGKTLPLAEALEWHFELTVNTANIVENYATLTRSESLLPLVGDKAQLQQYAATTPIVDMVRFSPAQLDAQALIDLLRPLTPRLYSIASAQAEVESEVHITVGVVRYDIEGRARAGGASSFLADRVEEEGEVRVFIEHNDNFRLPANPQTPVIMIGPGTGIAPFRAFMQQRAAEGAEGKNWLFFGNPHFTEDFLYQVEWQRYVKEGLLSRIDLAWSRDQKEKIYVQDKLREQGAELWRWINDGAHIYVCGDARRMAADVEKALLEVIAEFGAMDIEAADEFLSELRVERRYQRDVY
>NZ_CP007532.1|WP_001290665.1|178521_180234_-|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit
MSEKHPGPLVVEGKLSDAERMKLESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAAQKLEPRHAMLLRCRLPGGVITTTQWQAIDKFAADNTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGLETFKAEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDNNWHLTLFIENGRILDYPGRPLKTGLLEIAKIHQGEFRITANQNLIIASVPESQKVKIETLARDHGLMNAVSAQRENSMACVSFPTCPLAMAEAERFLPSFTDKVEAILEKHGIPDEHIVMRVTGCPNGCGRAMLAEIGLVGKAPGRYNLHLGGNRIGTRIPRMYQENITEPDILASLDELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDFWE
>NZ_CP007532.1|WP_023136478.1|177711_178446_-|phosphoadenosine-phosphosulfate-reductase
MSQLDLNALNELPKVDRVLALAETNAQLETLTAEERVVWALENLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNDINKVEPMNRALKELKAQTWFAGLRREQSGSRAHLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>NZ_CP007532.1|WP_001145535.1|176670_177624_+|SPI-1-type-III-secretion-system-effector-SopD
MPVTLSFGNHQNYTLNESRLAHLLSADKEKAIHMGGWDKVQDHFRAEKKDHALEVLHSIIHGQGRGEPGEMEVNVEDINKIYAFKRLQHLACPAHQDLFTIKLDASQTQFLLMVGDTVISQSNIKDILNISDDAVIESMSREERQLFLQICEVIGAKMTWHPELLQESISTLRKEVTGNAQIKTAVYEMMRPAEAPDHPLVEWQDLLTADEKSMLACINAGNFEPTTQFCKIGYQEVQGEVAFSMMHPCISYLLHSYSPFAEFKPTNSGFLKKLNQDYNDYHAKKMFIDVILEKLYLTHERSLHIGKDGCSRNILLT
>NZ_CP007532.1|WP_023262712.1|173563_176227_-|CRISPR-associated-helicase/endonuclease-Cas3
MSIYHYWGKSRRGEIDGGDDYHLLCWHSLDVAAVGYWMVINNIYFIDHYLKKLGIQDKEQAAQFFAWILCWHDIGKFAHSFQQLYRHEALNIFNEPTRHYEKIAHTTLGYVLWNSWLSECPELFPPSSLSVRKSKRVMALWMPVTTGHHGRPPEAIQELDHFRQQDKDAARDFLLRIKALFPLITLPESWDEDEGIDQFQQLSWFISAAVVLADWTGSASRYFPRTAEKMPVDTYWQQALAKAQTAITLFPSAANVSAFTGIETLFPFIQHPTPLQQKALELDINVDGAQLFILEDVTGAGKTEAALILAHRLMAAGKAQGLYFGLPTMATANAMFERMANTWLALYQPDSRPSLILAHSARRLMDRFNQSIWSVTLSGTEEPDEAQPDSQGCAAWFADSNKKALLAEVGVGTLDQAMMAVMPFKHNNLRLLGLSNKILLADEIHACDAWMSRILEGLIERQASNGNATILLSATLSQQQRDKLVAAFSRGVRRSVQAPLLGHDDYPWLTQVTQTELISQRVDTRKEVERSVDIGWLHSEEACLERIGEAVEKGNCIAWIRNSVDDAIRIYRQLQLSKVVATENLLLFHSRFAFHDRQRIESQTLNLFGKQSGAQRAGKVIIATQVIEQSLDIDCDEMISDLAPVDLLIQRAGRLQRHIRDRNGLVKKSGQDERETPVLRILAPEWDDAPRENWLSSAMRNSAYVYPDHGRMWLTQRILREQGTIRMPQSARLLIESVYGEDVNMPVGFAKTEQLQKGKFYCDRAFARQMLLNFASGYCAEISDSLPEKMSTRLAEESVTLWLAKIVDGVVTPYASGEHAWEMSVLRVRQSWWDKHKDEFEKLDGEPLRKWCAQQYQDKDFATVIVVTDCAACGYSANEGLIGMMGE
>NZ_CP007532.1|WP_001645981.1|171995_173552_-|type-I-E-CRISPR-associated-protein-Cse1/CasA
MDNFSLLTTPWLPVRFKDGSTGKLAPVNLADENVVDIAATRADLQGAAWQFLLGLLQCSIVPKRYKNWEDIWFDGLHADALHKALAQLEHAFQFGAETPSFMQDFEPLTGEKVSIASLLPEIPGAQTTKFNKDHFIKRGVTERFCPHCAALALFSLQLNAPAGGKGYRTGLRGGGPLTTLVELQEYQGERQTPLWRKLWLNVMPQDVADLPLSDQCDAAVFPWLAATRTSEQANAVTTPDQVDKLQAYWGMPRRIRLDFATLQSGCCDICGAESDELLGFMTVKNYGVNYDGWRHPLTPYRAPVKDQNAFFSVKPQPGGLIWRDWLGLSQNNQTEANYESPAQVVKVFNARRLRDVKAGVWGFGADFDNMKIRCWYEHHFPLLMTEGLIPDLRKATQTATRLLSLLRGALKEAWFANAKDARGDFSFIDIDFWNLTQGRFLNLIHDLENGHKPDERLNKWQRELWLFTRCYFDDHVFTNPYESSDLERIMKARKKYFTSSAEKQSAKAAKAKKQEAAE
>NZ_CP007532.1|WP_000029525.1|171438_171999_-|type-I-E-CRISPR-associated-protein-Cse2/CasB
MSIVQEDHKATLRKWHEDLQEKRGARASLRRSKTVNEACLSEGFHLLLMQTHSLWKNKAAWHVTALAITAVLAAHIKFIDGRQSFATQLGQKKSGDNPVMSKLRFSRLSAVKTPDELLRQLRRAVQLLDGSVNLISLAEDIFRWCQEQDDLLSHHRRQQRPTEFLRIRWALEYYQAGDGDIDNEQD
>NZ_CP007532.1|WP_001645980.1|170366_171425_-|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTTFIQLHLLTAYPASNLNRDDTGAPKTVVLGGATRLRISSQSLKRAWRTSELFEQALAGNIGIRSGRIAREAAQILIESGIDAKKAVEYVKNIANCFGKVKEDKKPKDELTNAETEQLVHISPAEFEAVKALARRLAEEKRPATEEEAELLRHDRMAVDIAMFGRMLAKKTDFNVEAACQVAHAFGVSETIVEDDFFTAVDDLRQASAEDAGAGHLGETGFGSALFYTYICIDKDLLVKNLNGNEELANKTLRAFTEAALKVSPTGKQNSFASRAYASWALAEKGTDQPRSLAAAFYEPINGTDQLNVAVKRITSLHKNMNKVYGQRTDTASFDVMNQQGSMKDVLDFICA
>NZ_CP007532.1|WP_001199961.1|184933_185605_-|7-carboxy-7-deazaguanine-synthase-QueE
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWDKLSDREVSLFSILAKTKESDKWGAASSEDLLAVINRQGYTARHVVITGGEPCIHDLMPLTDLLEKSGFSCQIETSGTHEVRCTPNTWVTVSPKVNMRGGYDVLSQALERANEIKHPVGRVRDIEALDELLATLSDDKPRVIALQPISQKEDATRLCIETCIARNWRLSMQTHKYLNIA
>NZ_CP007532.1|WP_000036734.1|185740_187039_-|phosphopyruvate-hydratase
MSKIVKVIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVGAVNGPIAQAILGKDAKDQAGIDKIMIDLDGTENKSNFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKGKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>NZ_CP007532.1|WP_000210864.1|187121_188759_-|CTP-synthase-(glutamine-hydrolyzing)
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQLAVDIGREHALFMHLTLVPYLAAAGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISMKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIYEEANPAGEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVTVNIKLIDSQDVETRGVEILKDLDAILIPGGFGYRGVEGKIATARYARENNIPYLGICLGMQVALIEFARNVAGMDNANSTEFVPDCKYPVVALITEWRDEDGNVEVRSEKSDLGGTMRLGAQQCQLSDDSLVRQLYGASTIVERHRHRYEVNNMLLKQIEAAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAASEHQKRQAK
>NZ_CP007532.1|WP_023207769.1|188986_189787_-|nucleoside-triphosphate-pyrophosphohydrolase
MTTNHQIDRLLTLMQRLRDPENGCPWDKEQTFASIAPYTLEETYEVLDAIVREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFGELSADNSEEALVRWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCSNVGFDWTTLGPVVDKVYEEIDEVMFEARQAVVDQAKLEEEMGDLLFATVNMARHLGTKAELALQKANDKFERRFREVERIVAARGLEMTGVDLETMEEVWQEVKRQEIDL
>NZ_CP007532.1|WP_023207770.1|190556_190853_-|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin
MRTVKLTPKASEDVENIWHYGWQYFGEIQADRYINHLSEIFSIMSANNIGTPRPELGEYIYALPFERYIIYFIQSVTEVIVIRILSQNQDAGKHVNWL
>NZ_CP007532.1|WP_000480218.1|190818_191175_-|type-II-toxin-antitoxin-system-ParD-family-antitoxin
MFLTYISFPVYSYVRFILTVEAVMARTMTVDLGDELREFIESLIESGDYRTQSEVIRESLRLLREKQAESRLQALRELLAEGLNSGEPQAWEKDAFLRKVKTGMIKPDENGKINAKGQ
>NZ_CP007532.1|WP_023207771.1|191245_193495_-|GTP-diphosphokinase
MVAVRSAHINKAGEFDPKKWIASLGISSQQSCERLAETWAYCLQQTQGHPDADLLLWRGVEMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVGKSIVTLIHGVRDMAAIRQLNATHNDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLREVKEAPEDERVLAAKECTNIYAPLANRLGIGQLKWELEDYCFRYLHPAEYKRIAKLLHERRLDREHYIEEFVGHLRAEMKNEGVQAEVYGRPKHIYSIWRKMQKKHLAFDELFDVRAVRIVAERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTVEIQIRTKQMHEDAELGVAAHWKYKEGAASGGVRSGHEDRIAWLRKLIAWQEEMADSGEMLDEVRSQVFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVGHRCIGAKIGGRIVPFTYQLQMGDQVEIITQKQPNPSRDWLNPNLGYVTTSRGRSKIHAWFRKQDRDKNILAGRQILDDELAHLGISLKEAEKHLLPRYNFNELEELLAAIGGGDIRLNQMVNFLQSQFNKPSAEEQDAAALKQLQQKTYAPQNRRKDDGRVVVEGVGNLMHHIARCCQPIPGDEIVGFITQGRGISVHRADCEQLAELRSHAPERIVEAVWGESYSAGYSLVVRVQANDRSGLLRDITTILANEKVNVLGVASRSDIKQQIATIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLHGGVNPRQ
>NZ_CP007532.1|WP_023262708.1|193546_194842_-|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD
MAQFYSAKRRVTTRQIITVKVNDLDSFGQGVARHNGKALFIPGLLPEESAEVIITEDKKQFARARVSRRLNDSPERETPRCPHFGVCGGCQQQHVSITLQQRSKSAALARLMKHEVNDIIAGEPWGYRRRARLSLNCLPDKPLQMGFRKAGSSDIVNVEQCPVLAPQLEALLPRIRACLASLHGTRHLGHVELVQAGSGTLMILRHTAPLSAADKEKLERFSHSEGLSLFLAPFSEILETVSGEAPWYDSHGLRLAFSPRDFIQVNEAVNQQMIARALEWLDVRAEDRVLDLFCGMGNFTLPLATRAASVVGVEGVPALVEKGRENAIRNGLHNVTFFHENLEEDVTKQPWAKNGFDKVLLDPARAGATGVMRHIIKLKPIRIVYVSCNPATLARDSEALVNAGYEVTRLAMLDMFPHTGHLESMVLFERM
>NZ_CP007532.1|WP_000186399.1|194899_197656_+|two-component-sensor-histidine-kinase-BarA
MTNYSLRARMMILILAPTVLIGLLLSIFFVVHRYNDLQRQLEDAGASIIEPLAVSSEYGMNLQNRESIGQLISVLHRRHSDIVRAISVYDDHNRLFVTSNFHLDPSQMQLPAGAPFPRRLSVDRHGDIMILRTPIISESYSPDESAIADAKNTKNMLGYVALELDLKSVRLQQYKEIFISSVMMLFCIGIALIFGWRLMRDVTGPIRNMVNTVDRIRRGQLDSRVEGFMLGELDMLKNGINSMAMSLAAYHEEMQHNIDQATSDLRETLEQMEIQNVELDLAKKRAQEAARIKSEFLANMSHELRTPLNGVIGFTRLTLKTELNPTQRDHLNTIERSANNLLAIINDVLDFSKLEAGKLILESIPFPLRNTLDEVVTLLAHSSHDKGLELTLNIKNDVPDNVIGDPLRLQQVITNLVGNAIKFTESGNIDILVEKRALSNTKVQIEVQIRDTGIGIPERDQSRLFQAFRQADASISRRHGGTGLGLVITQKLVNEMGGDISFHSQPNRGSTFWFHINLDLNPNVIIDGPSTACLAGKRLAYVEPNATAAQCTLDLLSDTPVEVVYSPTFSALPLAHYDIMILSVPVTFREPLTMQHERLAKAASMTDFLLLALPCHAQINAEKLKQGGAAACLLKPLTSTRLLPALTEYCQLNHHPEPLLMDTSKITMTVMAVDDNPANLKLIGALLEDKVQHVELCDSGHQAVDRAKQMQFDLILMDIQMPDMDGIRACELIHQLPHQQQTPVIAVTAHAMAGQKEKLLSAGMNDYLAKPIEEEKLHNLLLRYKPGANVAARLMAPEPAEFIFNPNATLDWQLALRQAAGKPDLARDMLQMLIDFLPEVRNKIEEQLVGENPNGLVDLIHKLHGSCGYSGVPRMKNLCQLIEQQLRSGVHEEELEPEFLELLDEMDNVAREAKKILG
>NZ_CP007532.1|WP_000706486.1|197699_198842_-|glycerate-kinase
MKIVIAPDSYKESLSALEVATAIEQGFREIWPDADYLKLPLADGGEGTVEAMVEATAGRIVHVEVTGPLGHRVNAFYGLSGDARSAFIEMAAASGLEQVPPAQRDPLKTTSWGTGELIRHALDAGVEHIIIGIGGSATNDGGAGMVQALGARLRDAQGNDIVQGGIGLETLASIDISGLDKRLSACHIEVACDVTNPLTGKEGASAVFGPQKGATPEMIERLDTALTRYAHLIARDLHVDVLDLAGGGAAGGMGAALYAFCGAQLRRGIEIVTDALHLEACLADADLVITGEGRIDSQTIHGKVPIGVANIAKRYNKPVIGIAGSLTADVGVVHEHGLDAVFSVIYTICTLEDALKNASENVRMTARNVAATLKAGQQLR

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Crispr_ID: NZ_CP007532_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP007532_3

1936292-1936368

Orphan

Consensus_repeat	Method
CAGATGTAGGCCTGAGAAGCGTAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP007532_3

>merge|NZ_CP007532|3|1936292-1936368|CRISPRCasFinder
CAGATGTAGGCCTGAGAAGCGTAGTGCCATCAGGCATAAACCAATCCTTGAGCCAGATGTAGGCCTGAAAAGCGTAG

>NZ_CP007532|3|4|1936292-1936368|CRISPRCasFinder
CAGATGTAGGCCTGAGAAGCGTAG	TGCCATCAGGCATAAACCAATCCTTGAGC
CAGATGTAGGCCTGAAAAGCGTAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP007532.1\|WP_000257211.1\|1936388_1937237_-\|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)	unknown	unknown	gnl\|CDD\|273208
NZ_CP007532.1\|WP_000092999.1\|1938445_1939435_-\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	unknown	unknown	gnl\|CDD\|234696
NZ_CP007532.1\|WP_023262602.1\|1933689_1935552_+\|glutathione-regulated-potassium-efflux-system-protein-KefC	unknown	unknown	gnl\|CDD\|235131
NZ_CP007532.1\|WP_001116966.1\|1944904_1947811_-\|RNA-polymerase-associated-protein-RapA	unknown	unknown	gnl\|CDD\|235319
NZ_CP007532.1\|WP_023262603.1\|1933166_1933697_+\|glutathione-regulated-potassium-efflux-system-oxidoreductase-KefF	unknown	unknown	gnl\|CDD\|234852
NZ_CP007532.1\|WP_000767274.1\|1928898_1929315_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007532.1\|WP_023137260.1\|1947984_1950336_-\|DNA-polymerase-II	unknown	unknown	gnl\|CDD\|235595
NZ_CP007532.1\|WP_023212450.1\|1925221_1926508_+\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|182273
NZ_CP007532.1\|WP_000066315.1\|1930726_1932616_+\|sulfatase-like-hydrolase/transferase	unknown	unknown	gnl\|CDD\|225661
NZ_CP007532.1\|WP_000610894.1\|1937247_1937625_-\|Co2+/Mg2+-efflux-protein-ApaG	unknown	unknown	gnl\|CDD\|180098
NZ_CP007532.1\|WP_001065397.1\|1937627_1938449_-\|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	unknown	unknown	gnl\|CDD\|234708
NZ_CP007532.1\|WP_001172089.1\|1928368_1928599_+\|YgdI/YgdR-family-lipoprotein	unknown	unknown	gnl\|CDD\|380215
NZ_CP007532.1\|WP_000624379.1\|1935750_1936230_+\|type-3-dihydrofolate-reductase	unknown	unknown	gnl\|CDD\|182714
NZ_CP007532.1\|WP_001200595.1\|1943388_1944201_+\|co-chaperone-DjlA	unknown	unknown	gnl\|CDD\|236512
NZ_CP007532.1\|WP_000800482.1\|1939434_1940721_-\|peptidylprolyl-isomerase-SurA	unknown	unknown	gnl\|CDD\|236758
NZ_CP007532.1\|WP_000525196.1\|1944233_1944893_-\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	unknown	unknown	gnl\|CDD\|236659
NZ_CP007532.1\|WP_000203736.1\|1926504_1926792_+\|ferredoxin-like-protein-FixX	unknown	unknown	gnl\|CDD\|185346
NZ_CP007532.1\|WP_001642466.1\|1940774_1943135_-\|LPS-assembly-protein-LptD	unknown	unknown	gnl\|CDD\|235158
NZ_CP007532.1\|WP_001136169.1\|1926939_1928280_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340874
NZ_CP007532.1\|WP_000745957.1\|1929538_1929829_-\|DUF1471-domain-containing-protein	unknown	unknown	gnl\|CDD\|369322

Protein	Function_ID	Function_description	E-value
NZ_CP007532.1\|WP_000257211.1\|1936388_1937237_-\|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)	gnl\|CDD\|273208	TIGR00668, Bis5'-nucleosyl-tetraphosphatase_symmetrical, bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Diadenosine 5',5"'-P1,P4-tetraphosphate (Ap4A) is a regulatory metabolite of stress conditions. It is hydrolyzed to two ADP by this enzyme. Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase. [Cellular processes, Adaptations to atypical conditions].	0
NZ_CP007532.1\|WP_000092999.1\|1938445_1939435_-\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	gnl\|CDD\|234696	PRK00232, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed.	0
NZ_CP007532.1\|WP_023262602.1\|1933689_1935552_+\|glutathione-regulated-potassium-efflux-system-protein-KefC	gnl\|CDD\|235131	PRK03562, PRK03562, glutathione-regulated potassium-efflux system protein KefC; Provisional.	0
NZ_CP007532.1\|WP_001116966.1\|1944904_1947811_-\|RNA-polymerase-associated-protein-RapA	gnl\|CDD\|235319	PRK04914, PRK04914, RNA polymerase-associated protein RapA.	0
NZ_CP007532.1\|WP_023262603.1\|1933166_1933697_+\|glutathione-regulated-potassium-efflux-system-oxidoreductase-KefF	gnl\|CDD\|234852	PRK00871, PRK00871, glutathione-regulated potassium-efflux system oxidoreductase KefF.	1.05176e-130
NZ_CP007532.1\|WP_023137260.1\|1947984_1950336_-\|DNA-polymerase-II	gnl\|CDD\|235595	PRK05762, PRK05762, DNA polymerase II; Reviewed.	0
NZ_CP007532.1\|WP_023212450.1\|1925221_1926508_+\|FAD-dependent-oxidoreductase	gnl\|CDD\|182273	PRK10157, PRK10157, putative oxidoreductase FixC; Provisional.	0
NZ_CP007532.1\|WP_000066315.1\|1930726_1932616_+\|sulfatase-like-hydrolase/transferase	gnl\|CDD\|225661	COG3119, AslA, Arylsulfatase A and related enzymes [Inorganic ion transport and metabolism].	4.47416e-83
NZ_CP007532.1\|WP_000610894.1\|1937247_1937625_-\|Co2+/Mg2+-efflux-protein-ApaG	gnl\|CDD\|180098	PRK05461, apaG, CO2+/MG2+ efflux protein ApaG; Reviewed.	1.286e-75
NZ_CP007532.1\|WP_001065397.1\|1937627_1938449_-\|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	gnl\|CDD\|234708	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA.	5.15657e-147
NZ_CP007532.1\|WP_001172089.1\|1928368_1928599_+\|YgdI/YgdR-family-lipoprotein	gnl\|CDD\|380215	NF033216, lipo_YgdI_YgdR, YgdI/YgdR family lipoprotein. Members of this family are exclusively lipoproteins of small size, including YgdI and YgdR from E. coli K-12.	8.57117e-30
NZ_CP007532.1\|WP_000624379.1\|1935750_1936230_+\|type-3-dihydrofolate-reductase	gnl\|CDD\|182714	PRK10769, folA, type 3 dihydrofolate reductase.	1.70454e-127
NZ_CP007532.1\|WP_001200595.1\|1943388_1944201_+\|co-chaperone-DjlA	gnl\|CDD\|236512	PRK09430, djlA, co-chaperone DjlA.	1.41897e-171
NZ_CP007532.1\|WP_000800482.1\|1939434_1940721_-\|peptidylprolyl-isomerase-SurA	gnl\|CDD\|236758	PRK10770, PRK10770, peptidyl-prolyl cis-trans isomerase SurA; Provisional.	0
NZ_CP007532.1\|WP_000525196.1\|1944233_1944893_-\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	gnl\|CDD\|236659	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA.	3.00611e-157
NZ_CP007532.1\|WP_000203736.1\|1926504_1926792_+\|ferredoxin-like-protein-FixX	gnl\|CDD\|185346	PRK15449, PRK15449, ferredoxin-like protein FixX; Provisional.	1.60149e-70
NZ_CP007532.1\|WP_001642466.1\|1940774_1943135_-\|LPS-assembly-protein-LptD	gnl\|CDD\|235158	PRK03761, PRK03761, LPS assembly outer membrane complex protein LptD; Provisional.	0
NZ_CP007532.1\|WP_001136169.1\|1926939_1928280_+\|MFS-transporter	gnl\|CDD\|340874	cd17316, MFS_SV2_like, Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the Major Facilitator Superfamily. This family is composed of metazoan synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters including those that transport inorganic phosphate (Pht), aromatic compounds (PcaK and related proteins), proline/betaine (ProP), alpha-ketoglutarate (KgtP), citrate (CitA), shikimate (ShiA), and cis,cis-muconate (MucK), among others. SV2 is a transporter-like protein that serves as the receptor for botulinum neurotoxin A (BoNT/A), one of seven neurotoxins produced by the bacterium Clostridium botulinum. BoNT/A blocks neurotransmitter release by cleaving synaptosome-associated protein of 25 kD (SNAP-25) within presynaptic nerve terminals. Also included in this family is synaptic vesicle 2 (SV2)-related protein (SVOP) and similar proteins. SVOP is a transporter-like nucleotide binding protein that localizes to neurotransmitter-containing vesicles. The SV2-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.41494e-58
NZ_CP007532.1\|WP_000745957.1\|1929538_1929829_-\|DUF1471-domain-containing-protein	gnl\|CDD\|369322	pfam07338, DUF1471, Protein of unknown function (DUF1471). This family consists of several hypothetical Enterobacterial proteins of around 90 residues in length. Some members of this family are annotated as ydgH precursors and contain two copies of this region, one at the N-terminus and the other at the C-terminus. The function of this family is unknown.	4.47396e-13

>NZ_CP007532.1|WP_000624379.1|1935750_1936230_+|type-3-dihydrofolate-reductase
MISLIAALAVDRVIGMENAMPWNLPADLAWFKRNTLNKPVVMGRHTWESIGRPLPGRKNIVISSQPGTDDRVQWVKSVDEAIAACGDAPEIMVIGGGRVYEQFLPKAQKLYLTHIDAEVEGDTHFPDYEPDDWESVFSEFHDADAQNSHSYCFEILERR
>NZ_CP007532.1|WP_023262602.1|1933689_1935552_+|glutathione-regulated-potassium-efflux-system-protein-KefC
MDSHTLLQALIYLGSAALIVPIAVRLGLGSVLGYLIAGCIIGPWGLRLVTDAESILHFAEIGVVLMLFVIGLELDPQRLWKLRASVFGGGALQMVVCGGLIGLFCMFLGLRWQVAELIGMTLALSSTAIAMQAMNERNLTVSQVGRSAFAVLLFQDIAAIPLVAMIPLLAASGASTTLGAFALSALKVAGALALVVLLGRYVTRPALRFVARSGLREVFSAVALFLVFGFGLLLEEVGLSMAMGAFLAGVLLASSEYRHALESDIEPFKGLLLGLFFIGVGMSIDFGTLVENPLRILLLLAGFLTIKIVMLWLVARPLGVPAKQRRWFAVLLGQGSEFAFVVFGAAQMAGVLEPEWAKALTLAVALSMAATPIFLVLLTRMEKTATGEAREADEIDEEQPRVIVAGFGRFGQIAGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDDPQTNLQLSELVRSHFPHLQIIARARDVDHYIRLRQAGVAMPERETFEGALKSGRQALEALGLGRYEARERADLFRHFNTRMVEDMAKGENDPLSRAAAYKRTSAMLSEIITEDREHLSLIQRHGWQGTAGGKHSGEAADEPEVKPSI
>NZ_CP007532.1|WP_023262603.1|1933166_1933697_+|glutathione-regulated-potassium-efflux-system-oxidoreductase-KefF
MILIIYAHPYPHHSHANKRMLEQAGTLENVEIRSLYHLYPDFNIDVAAEQEALSRASLIVWQHPMQWYSVPPLLKLWMDKVLTHGWAYGHGGTALHGKHLLWAVTTGGGENHFTIGSHPGFDVLSQPLQATVLYCGLKWLPPFTMHCTFICDDDTLQAQARQYKQRLLAWQEVNHG
>NZ_CP007532.1|WP_000066315.1|1930726_1932616_+|sulfatase-like-hydrolase/transferase
MSNKKNLSAEETDLTRRKLLTSAGILAAGGMLSGAVKADEKCAVKAKPAWDKPFTGEIPEKLPEGYNILLVVTDQERFFPTFPFPVPGRERLMKTGVTFCNHQNTSNVCTPSRSVLYTGLHMPQTKMFDNLGLPWMPYDLDPALGTTGHMMRELGYYTAYKGKWHLTEKLEKPLPDEKDEDIDVGDIPEPELHKIMEKYGFADYHGIGDIIGHSKGGYFYDSTTTAQTINWLRCKGQPLNDQHKPWFLAVNLVNPHDVMFIDTDKEGEKVQWRGELDQDDNTLAPTQPPENELYQASWPNYPLPANRHQSFNEQGRPPAHLEYQTARAALEGQFPDEDRRWRKLLDYYFNCIRDCDTHLDRILNELDALKLTDKTIVVFTADHGELGGSHQMHGKGASVYKEQIHVPMIISHPAYPGNKKCQALTCHLDIAPTLVGLTGLPEEKQHQALGNRKGVNFSGLLKNPEGVAVNAVRNASLYCYGMILYTDAHYLHRVIALQRDKQKTVAQIKQEISHLHPDFSHRSGTRMINDGRYKFARYFSLREHNTPETWEDLIKYNDLELYDLKNDPDENHNLAADKQKYQDLILTMNEKLNKIIKDEIGVDDGSFMPDAAHEPWDLTIEQFNRMAKD
>NZ_CP007532.1|WP_000745957.1|1929538_1929829_-|DUF1471-domain-containing-protein
MKKRIIAAALLATVASFSTLAAEQVSKQEISHFKLVKVGTINVSQSGGQISSPSDLREKLSALADAKGGKYYHIIAAREHGPNFEAVAEVYNDATK
>NZ_CP007532.1|WP_000767274.1|1928898_1929315_+|hypothetical-protein
MKLIPFYLLALFSAASGATEINACKDLIGTWKTTADNPPYTMTILPPVEGCGEKCVKLNVQYELDVTHRNALYCHEGQEGVKGQGPMVIAFEGAYGGHAIGTYNRQLQLLWAGVIPKNKKGKWITKMENYWFRQVKAH
>NZ_CP007532.1|WP_001172089.1|1928368_1928599_+|YgdI/YgdR-family-lipoprotein
MQKRLMTALFTAATLFTVAGCSSNQAVETTDGKTIVTDGKPEVDNDTGMVSYKNAATGKTEQINRDQLKNMSELDN
>NZ_CP007532.1|WP_001136169.1|1926939_1928280_+|MFS-transporter
MPQPRNFDDLKFSSIHRRIMLWGSGGPFLDGYVLVIIGVALEQLTPLLHLDAEWIGALGAATLAGLFIGTSLFGYICDKVGRRKMFLLDIIAIGVISVATMFVSTPLELLVMRVLIGIVIGADYPIATSMITEFSNTRQRAFSIGFIAAMWYVGATCANLVGYWLYDMEGGWRWMLGSAFIPCLIILIGRFDLPESPRWLLRKGRVKECEQMMIKLFGEPVCFDDEPPQETRFLQLFNRRHFPFVLFVAAIWTCQVIPMFAIYTFGPQIVGLLGWEQGRNAALGNVVISLFFMLGCIPAMFWLNSIGRRPLLIGSFAMMTIALALLGLVSNLGIILVVVAFAVYAFFSGGPGILQWLYPNELFPTDIRASAVGVIMSLSRIGTIVSTWALPIFITRYGINNVMLIGALISLVGLGVSVMFAPETRGLTLTQTGNMTLRGTPSDNPR
>NZ_CP007532.1|WP_000203736.1|1926504_1926792_+|ferredoxin-like-protein-FixX
MTSPVNVDVKLGVNKFNVDEDSPHIILKTDPDKQALEVLIKACPAGLYKKQDDGSVRFDYAGCLECGTCRILGLDTALEKWEYPRGTFGVEFRYG
>NZ_CP007532.1|WP_023212450.1|1925221_1926508_+|FAD-dependent-oxidoreductase
MSEDIFDAIIVGAGLAGSVAALVLAREGAQVLVIERGNSAGAKNVTGGRLYAHSLERIIPGFADQAPIERMITHEKLAFMTDKGAMTMDYCNGEDAASSQVSYSVLRSKFDAWLMEQAEEAGAQLITGIRVDNVVQRDGNVVGVEADGDILEAKVVILADGVNSLLAEKLGMAKRVEASHVAVGVKELIELPKSVIEDRFQLQGNEGAACLFAGAPTDGLMGGGFLYTNETTLSLGLVCGLHHLKDAKKSVPQMLEDFKQHPAVAPLIAGGKLVEYAAHVVPEAGMNMQPELVGDGVLIAGDAAGMCMNLGFTIRGMDLAISAGEAAAKTVLSAMKRDDFSKQSLGEYRQHLDEGPMRDMRMYQKLPAFLDNPRMFTAYPEMAVNIARDLFTVDGSAPVPMRKKILRHAKKVGLINLMKDGLKGVTVL
>NZ_CP007532.1|WP_000257211.1|1936388_1937237_-|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)
MATYLIGDVHGCYDELIALLQQVEFTPDTDTLWLTGDLVARGPGSLDVLRYVKSLGNSVRLVLGNHDLHLLAVFAGISRNKPKDRLTPLLEAPDADELLNWLRRQPLLQVDEEKKLVMAHAGITPQWDLQTAKECARDVEAVLSSDSYPFFLDAMYGDMPNNWSPELSGLARLRFITNAFTRMRYCFPNGQLDMYSKASPENAPAPLKPWFAIPGPVSEAYSIAFGHWASLEGKGTPEGIYALDTGCCWGGELTCLRWEDKQYFVQPSNRQMDMGEGEAVNA
>NZ_CP007532.1|WP_000610894.1|1937247_1937625_-|Co2+/Mg2+-efflux-protein-ApaG
MINSPRVCIQVQSVYIEAQSSPDDERYVFAYTVTIRNLGRAPVQLLGRYWLITNGHGRETEVQGEGVVGVQPRIAPGEEYQYTSGAVIETPLGTMQGHYEMIDENGDAFTIDIPVFRLAVPTLIH
>NZ_CP007532.1|WP_001065397.1|1937627_1938449_-|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA
MNNRVHQGHLARKRFGQNFLNDRFVIDSIVSAINPQKGQAMVEIGPGLAALTEPVGERLDKLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTMNFGELSAQLGQPLRVFGNLPYNISTPLMFHLFSYTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYCQVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPYPVKDIRVLSRITTEAFNQRRKTIRNSLGNLFSVETLTEMGIDPAMRAENISVAQYCQMANYLSENAPLKES
>NZ_CP007532.1|WP_000092999.1|1938445_1939435_-|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA
MSSAQRVVITPGEPAGIGPDLVVQLAQRAWPIELVVCADGALLTERAAMLGLPLSLLPYSPDVPAAPQPAGTLTLLPVSLHAPAIPGQLTVENGPYVVETLARACDGCLNGEFAALITGPVHKGVINDAGIPFTGHTEFFEERSQAKKVVMMLATEELRVALATTHLPLRAIADAITPALLHEVIAILHHDLRTKFGIAEPRILVCGLNPHAGEGGHMGTEEIDTIIPVLDELRAQGMKLNGPLPADTLFQPKYLDNADAVLAMYHDQGLPVLKYQGFGRGVNITLGLPFIRTSVDHGTALELAGRGKADVGSFITALNLAIKMIVNTQ
>NZ_CP007532.1|WP_000800482.1|1939434_1940721_-|peptidylprolyl-isomerase-SurA
MKNWKTLLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAGQAGQQLPDDATLRHQILERLIMDQIILQMGQKMGVKITDEQLDQAIANIAKQNNMTMDQMRSRLAYDGLNYSTYRNQIRKEMIISEVRNNEVRRRITVLPQEVDALAKQIGTQNDASTELNLSHILIALPENPTSEQVNDAQRQAESIVEEARNGADFGKLAITYSADQQALKGGQMGWGRIQELPGIFAQALSTAKKGDIVGPIRSGVGFHILKVNDLRGQSQSISVTEVHARHILLKPSPIMNDQQARLKLEEIAADIKSGKTTFAAAAKEYSQDPGSANQGGDLGWATPDIFDPAFRDALTKLHKGQISAPVHSSFGWHLIELLDTRKVDKTDAAQKDRAYRMLMNRKFSEEAATWMQEQRASAYVKILSN
>NZ_CP007532.1|WP_001642466.1|1940774_1943135_-|LPS-assembly-protein-LptD
MKKRIPTLLATMIASALYSHQGLAADLASQCMLGVPSYDRPLVKGDTNDLPVTINADNAKGNYPDDAVFTGNVDIMQGNSRLQADEVQLHQKQAEGQPEPVRTVDALGNVHYDDNQVILKGPKGWANLNTKDTNVWEGDYQMVGRQGRGKADLMKQRGENRYTILENGSFTSCLPGSDTWSVVGSEVIHDREEQVAEIWNARFKVGPVPIFYSPYLQLPVGDKRRSGFLIPNAKYTTKNYFEFYLPYYWNIAPNMDATITPHYMHRRGNIMWENEFRYLTQAGAGLMELDYLPSDKVYEDEHPKEGDKHRWLFYWQHSGVMDQVWRFNVDYTKVSDSSYFNDFDSKYGSSTDGYATQKFSVGYAVQNFDATVSTKQFQVFNDQNTSSYSAEPQLDVNYYHNDLGPFDTRIYGQAVHFVNTKDNMPEATRVHLEPTINLPLSNRWGSLNTEAKLMATHYQQTNLDSYNSDPNNKNKLEDSVNRVMPQFKVDGKLVFERDMAMLAPGYTQTLEPRVQYLYVPYRDQSGIYNYDSSLLQSDYNGLFRDRTYGGLDRIASANQVTTGVTTRVYDDAAVERFNVSVGQIYYFTESRTGDDNIKWENDDKTGSLVWAGDTYWRISERWGLRSGVQYDTRLDSVATSSSSLEYRRDQDRLVQLNYRYASPEYIQATLPSYYSTAEQYKNGINQVGAVASWPIADRWSIVGAYYFDTNSSKPADQMLGLQYNSCCYAIRVGYERKLNGWDNDKQHAIYDNAIGFNIELRGLSSNYGLGTQEMLRSNILPYQSSM
>NZ_CP007532.1|WP_001200595.1|1943388_1944201_+|co-chaperone-DjlA
MQYWGKIIGVAVALMMGGGFWGVVLGLLVGHMFDKARSRKMAWFANQRERQALFFATTFEVMGHLTKSKGRVTEADIHIASQLMDRMNLHGDSRTAAQNAFRVGKADNYPLREKMRQFRSVCFGRFDLIRMFLEIQIQAAFADGSLHPNEREVLYVIAEELGISRVQFDQFLRMMQGGAQFGGGYHQQSGGGWQQAQRGPTLEDACNVLGVKTTDDATTIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKQKAQEIQKAYELIKEQKGFK
>NZ_CP007532.1|WP_000525196.1|1944233_1944893_-|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA
MGMENYNPPQEPWLVILYQDEHIMVVNKPSGLLSVPGRLEAHKDSIMTRIQRDYPQAESVHRLDMATSGVIVVALTKAAERELKRQFREREPKKQYVARVWGHPSPAEGLVDLPLICDWPNRPKQKVCYETGKPAQTEYNVVEFAADNTARVVLKPITGRSHQLRVHMLALGHPILGDRFYASPEALSLAPRLQLHAEMLTITHPAYGNSMTFKVPADF
>NZ_CP007532.1|WP_001116966.1|1944904_1947811_-|RNA-polymerase-associated-protein-RapA
MPFTLGQRWISDTESELGLGTVVAMDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDTITSHEGWQLHIDEVKEENGLLVYVGTRLDTEETNVTLREVLLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKFQSEQYRMPYSGLRGQRTNLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYTEAQHDAYNPFETEQLVICSLDFARRNKQRLEHLCDAEWDLLVVDEAHHLVWSTDAPSREYMAIEQLAERVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFEQFVEEQKNYRPVADAVAMLLAGNKLSNDELNRLGDLIGEQDIEPLLQAANSDRDDAQAARDELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTVKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPEQIYQEFEGDTGTWWNFDPRVEWLMGYLTSHRSQKVLVICAKATTALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASNLVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRAIYDSAYASLINYLAAPEETDGFDDLIKSCREQHEALKAQLEQGRDRLLEIHSNGGEKAQQLAQSIEEQDDDTNLIAFAMNLFDIVGINQDDRGDNLIVLTPSDHMLVPDFPGLPEDGCTITFERDVALSREDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELVYVVEAQAPKQLQLNRFLPPTPVRMLLDKNGNNLAAQVEFETFNRQLSAVNRHTGSKLVNAVQQDVHAILQLGETQIEKSARALIDNARREADEKLSGELSRLEALRAVNPNIRDDELAAIDSNRQQVLESLNQAGWRLDALRLIVVTHQ
>NZ_CP007532.1|WP_023137260.1|1947984_1950336_-|DNA-polymerase-II
MAQAGFILTRHWRDTPQGTEVSFWLATDNGPVQATLAPQESVAFIPTSQTSRAASLLQAEKDYRLTPLQLRDFHRQPVSGLYCRTHRQLMRMEKLLRENGVTVYEADVRPPERYLMERFITSPVWVDGEMRNGVIRNARLKPHPDYRPPLKWVSLDIETTRHGELYCIGLEGCGQRTVYMLGPANGDDRQLDFELVYVASRPQLLEKLNAWFAEHDPDVIIGWNVVQFDLRMLQKHAERYRIPLRLGRDNSELEWREHGFKNGVFFAQARGRVIIDGIDALKSAFWNFSSFSLEAVSQELLGEGKSIDNPWDRMDEIDRRFAQDKPALATYNLKDCELVTRIFHKTEIMPFLLERATINGLPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPLASPGGYVMDSQPGLYDSVLVLDYKSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVSQIWHGRDEAKRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHAIMRQTKALIEAQGYDVIYGDTDSTFVWLRRAHSEADAAEIGHRLVRHVNEWWAQTLQQQNLTSALELEFETHFCRFLMPTIRGADTGSKKRYAGLIQEGDSQRMVFKGLETVRTDWTPLAQRFQQELYLRVFRNEPYQDYVRETIDKLMAGELDAQLVYRKRLRRPLHEYQRNIPPHVRAARLADEQNLKRGRPAQYQNRGAIKYVWTVNGPEPVDYQQSPLDYEHYLTRQLQPVAEGILPFVEDNFATLLTGQLGLF

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP007532_1	1.6\|166960\|26\|NZ_CP007532\|PILER-CR	166960-166985	26	NZ_CP007532.1	2287354-2287379	0	1.0

1. spacer 1.6|166960|26|NZ_CP007532|PILER-CR matches to position: 2287354-2287379, mismatch: 0, identity: 1.0

caagccgttttcccccaaggagttgg	CRISPR spacer
caagccgttttcccccaaggagttgg	Protospacer
**************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP007532_1	1.17\|167625\|32\|NZ_CP007532\|PILER-CR	167625-167656	32	NC_049343	Escherichia phage 500465-2, complete genome	19941-19972	1	0.969
NZ_CP007532_1	1.17\|167625\|32\|NZ_CP007532\|PILER-CR	167625-167656	32	KP063541	Enterobacteria phage P88, complete genome	32122-32153	1	0.969
NZ_CP007532_1	1.28\|167611\|32\|NZ_CP007532\|CRT,CRISPRCasFinder	167611-167642	32	NC_049343	Escherichia phage 500465-2, complete genome	19941-19972	1	0.969
NZ_CP007532_1	1.28\|167611\|32\|NZ_CP007532\|CRT,CRISPRCasFinder	167611-167642	32	KP063541	Enterobacteria phage P88, complete genome	32122-32153	1	0.969
NZ_CP007532_1	1.17\|167625\|32\|NZ_CP007532\|PILER-CR	167625-167656	32	NZ_MK439959	Escherichia coli strain Ec-2Lar plasmid pC-Ec2-KPC, complete sequence	69840-69871	2	0.938
NZ_CP007532_1	1.28\|167611\|32\|NZ_CP007532\|CRT,CRISPRCasFinder	167611-167642	32	NZ_MK439959	Escherichia coli strain Ec-2Lar plasmid pC-Ec2-KPC, complete sequence	69840-69871	2	0.938
NZ_CP007532_1	1.17\|167625\|32\|NZ_CP007532\|PILER-CR	167625-167656	32	NC_049341	Escherichia phage 503458, complete genome	4009-4040	3	0.906
NZ_CP007532_1	1.17\|167625\|32\|NZ_CP007532\|PILER-CR	167625-167656	32	CP025923	Escherichia phage sp. chromosome, complete genome	31769-31800	3	0.906
NZ_CP007532_1	1.17\|167625\|32\|NZ_CP007532\|PILER-CR	167625-167656	32	NC_049344	Escherichia phage 520873, complete genome	31769-31800	3	0.906
NZ_CP007532_1	1.17\|167625\|32\|NZ_CP007532\|PILER-CR	167625-167656	32	NC_049391	Escherichia virus P88_4B11 genome assembly, chromosome: 1	20794-20825	3	0.906
NZ_CP007532_1	1.28\|167611\|32\|NZ_CP007532\|CRT,CRISPRCasFinder	167611-167642	32	NC_049341	Escherichia phage 503458, complete genome	4009-4040	3	0.906
NZ_CP007532_1	1.28\|167611\|32\|NZ_CP007532\|CRT,CRISPRCasFinder	167611-167642	32	CP025923	Escherichia phage sp. chromosome, complete genome	31769-31800	3	0.906
NZ_CP007532_1	1.28\|167611\|32\|NZ_CP007532\|CRT,CRISPRCasFinder	167611-167642	32	NC_049344	Escherichia phage 520873, complete genome	31769-31800	3	0.906
NZ_CP007532_1	1.28\|167611\|32\|NZ_CP007532\|CRT,CRISPRCasFinder	167611-167642	32	NC_049391	Escherichia virus P88_4B11 genome assembly, chromosome: 1	20794-20825	3	0.906
NZ_CP007532_2	2.2\|183906\|32\|NZ_CP007532\|CRISPRCasFinder,CRT,PILER-CR	183906-183937	32	NZ_CP024424	Paracoccus yeei strain TT13 plasmid pTT13-2, complete sequence	112052-112083	5	0.844
NZ_CP007532_2	2.2\|183906\|32\|NZ_CP007532\|CRISPRCasFinder,CRT,PILER-CR	183906-183937	32	NZ_CP020440	Paracoccus yeei strain FDAARGOS_252 plasmid unnamed2, complete sequence	224971-225002	5	0.844
NZ_CP007532_2	2.2\|183906\|32\|NZ_CP007532\|CRISPRCasFinder,CRT,PILER-CR	183906-183937	32	NZ_CP044082	Paracoccus yeei strain FDAARGOS_643 plasmid unnamed4, complete sequence	90792-90823	5	0.844
NZ_CP007532_2	2.2\|183906\|32\|NZ_CP007532\|CRISPRCasFinder,CRT,PILER-CR	183906-183937	32	NZ_CP031080	Paracoccus yeei strain CCUG 32053 plasmid pYEE2, complete sequence	271400-271431	6	0.812
NZ_CP007532_2	2.13\|184577\|32\|NZ_CP007532\|CRISPRCasFinder,CRT,PILER-CR	184577-184608	32	NZ_CP035189	Bacillus licheniformis strain SRCM103914 plasmid unnamed1, complete sequence	1633-1664	6	0.812
NZ_CP007532_3	3.1\|1936316\|29\|NZ_CP007532\|CRISPRCasFinder	1936316-1936344	29	MN609868	Erysiphales associated levi-like virus 1 isolate PM-A_DN30821 hypothetical protein, putative capsid protein, and putative RdRp genes, complete cds	926-954	6	0.793
NZ_CP007532_1	1.10\|167198\|32\|NZ_CP007532\|PILER-CR	167198-167229	32	NZ_CP043441	Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence	1096435-1096466	7	0.781
NZ_CP007532_1	1.12\|167320\|32\|NZ_CP007532\|PILER-CR	167320-167351	32	NZ_CP019175	Salmonella enterica subsp. enterica serovar Give strain CFSAN024229 plasmid pCFSAN024229, complete sequence	92725-92756	7	0.781
NZ_CP007532_1	1.12\|167320\|32\|NZ_CP007532\|PILER-CR	167320-167351	32	NC_012657	Clostridium botulinum Ba4 str. 657 plasmid pCLJ2, complete sequence	4796-4827	7	0.781
NZ_CP007532_1	1.12\|167320\|32\|NZ_CP007532\|PILER-CR	167320-167351	32	NZ_CP031096	Clostridium botulinum strain CFSAN034200 plasmid p2_CDC51232, complete sequence	4158-4189	7	0.781
NZ_CP007532_1	1.15\|167503\|32\|NZ_CP007532\|PILER-CR	167503-167534	32	NZ_CP009453	Sphingopyxis sp. 113P3 plasmid unnamed, complete sequence	16592-16623	7	0.781
NZ_CP007532_1	1.21\|167184\|32\|NZ_CP007532\|CRT,CRISPRCasFinder	167184-167215	32	NZ_CP043441	Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence	1096435-1096466	7	0.781
NZ_CP007532_1	1.23\|167306\|32\|NZ_CP007532\|CRT,CRISPRCasFinder	167306-167337	32	NZ_CP019175	Salmonella enterica subsp. enterica serovar Give strain CFSAN024229 plasmid pCFSAN024229, complete sequence	92725-92756	7	0.781
NZ_CP007532_1	1.23\|167306\|32\|NZ_CP007532\|CRT,CRISPRCasFinder	167306-167337	32	NC_012657	Clostridium botulinum Ba4 str. 657 plasmid pCLJ2, complete sequence	4796-4827	7	0.781
NZ_CP007532_1	1.23\|167306\|32\|NZ_CP007532\|CRT,CRISPRCasFinder	167306-167337	32	NZ_CP031096	Clostridium botulinum strain CFSAN034200 plasmid p2_CDC51232, complete sequence	4158-4189	7	0.781
NZ_CP007532_1	1.26\|167489\|32\|NZ_CP007532\|CRT,CRISPRCasFinder	167489-167520	32	NZ_CP009453	Sphingopyxis sp. 113P3 plasmid unnamed, complete sequence	16592-16623	7	0.781
NZ_CP007532_2	2.2\|183906\|32\|NZ_CP007532\|CRISPRCasFinder,CRT,PILER-CR	183906-183937	32	NC_009621	Sinorhizobium medicae WSM419 plasmid pSMED02, complete sequence	654402-654433	7	0.781
NZ_CP007532_2	2.7\|184211\|32\|NZ_CP007532\|CRISPRCasFinder,CRT,PILER-CR	184211-184242	32	NZ_CP025980	Escherichia marmotae strain HT073016 plasmid pEM148, complete sequence	2635-2666	7	0.781
NZ_CP007532_2	2.7\|184211\|32\|NZ_CP007532\|CRISPRCasFinder,CRT,PILER-CR	184211-184242	32	NZ_CP025980	Escherichia marmotae strain HT073016 plasmid pEM148, complete sequence	31701-31732	7	0.781
NZ_CP007532_2	2.7\|184211\|32\|NZ_CP007532\|CRISPRCasFinder,CRT,PILER-CR	184211-184242	32	NZ_CP025980	Escherichia marmotae strain HT073016 plasmid pEM148, complete sequence	57356-57387	7	0.781
NZ_CP007532_1	1.2\|166716\|32\|NZ_CP007532\|CRISPRCasFinder,CRT,PILER-CR	166716-166747	32	NZ_CP049159	Caballeronia sp. SBC1 plasmid pSBC1_3, complete sequence	433910-433941	8	0.75
NZ_CP007532_1	1.2\|166716\|32\|NZ_CP007532\|CRISPRCasFinder,CRT,PILER-CR	166716-166747	32	NZ_CP049320	Caballeronia sp. SBC2 plasmid pSBC2-4, complete sequence	363377-363408	8	0.75
NZ_CP007532_1	1.5\|166899\|32\|NZ_CP007532\|CRISPRCasFinder,CRT,PILER-CR	166899-166930	32	NZ_CP023451	Rhizorhabdus dicambivorans strain Ndbn-20 plasmid p2, complete sequence	226258-226289	8	0.75
NZ_CP007532_1	1.5\|166899\|32\|NZ_CP007532\|CRISPRCasFinder,CRT,PILER-CR	166899-166930	32	CP021185	Sphingomonas wittichii DC-6 plasmid pDC04, complete sequence	51055-51086	8	0.75
NZ_CP007532_1	1.7\|167015\|32\|NZ_CP007532\|PILER-CR	167015-167046	32	CP011833	Geobacillus sp. 12AMOR1 plasmid pGARCT, complete sequence	2088-2119	8	0.75
NZ_CP007532_1	1.7\|167015\|32\|NZ_CP007532\|PILER-CR	167015-167046	32	CP017693	Geobacillus lituanicus strain N-3 plasmid pLDW-3, complete sequence	19797-19828	8	0.75
NZ_CP007532_1	1.7\|167015\|32\|NZ_CP007532\|PILER-CR	167015-167046	32	MN693285	Marine virus AFVG_25M368, complete genome	1786-1817	8	0.75
NZ_CP007532_1	1.7\|167015\|32\|NZ_CP007532\|PILER-CR	167015-167046	32	MK448920	Streptococcus phage Javan372, complete genome	12534-12565	8	0.75
NZ_CP007532_1	1.12\|167320\|32\|NZ_CP007532\|PILER-CR	167320-167351	32	NZ_LR217714	Candidatus Erwinia haradaeae strain ErCicurvipes isolate 3402 plasmid pBio	10458-10489	8	0.75
NZ_CP007532_1	1.12\|167320\|32\|NZ_CP007532\|PILER-CR	167320-167351	32	NZ_LR217714	Candidatus Erwinia haradaeae strain ErCicurvipes isolate 3402 plasmid pBio	25574-25605	8	0.75
NZ_CP007532_1	1.12\|167320\|32\|NZ_CP007532\|PILER-CR	167320-167351	32	NZ_CP013709	Clostridium botulinum strain F634 plasmid pRSJ2_2, complete sequence	8272-8303	8	0.75
NZ_CP007532_1	1.12\|167320\|32\|NZ_CP007532\|PILER-CR	167320-167351	32	NZ_CP013682	Clostridium botulinum strain 1169 plasmid pRSJ8_1, complete sequence	11837-11868	8	0.75
NZ_CP007532_1	1.12\|167320\|32\|NZ_CP007532\|PILER-CR	167320-167351	32	NZ_CP013295	Clostridium botulinum strain CDC_54064 plasmid pNPD1_1, complete sequence	22553-22584	8	0.75
NZ_CP007532_1	1.12\|167320\|32\|NZ_CP007532\|PILER-CR	167320-167351	32	NZ_CP013844	Clostridium botulinum strain A634 plasmid pRSJ19_2, complete sequence	44436-44467	8	0.75
NZ_CP007532_1	1.12\|167320\|32\|NZ_CP007532\|PILER-CR	167320-167351	32	NZ_MK275623	Clostridium perfringens strain JXJA17 plasmid p5, complete sequence	27234-27265	8	0.75
NZ_CP007532_1	1.12\|167320\|32\|NZ_CP007532\|PILER-CR	167320-167351	32	MT787017	UNVERIFIED: Staphylococcus phage WV, complete genome	5044-5075	8	0.75
NZ_CP007532_1	1.14\|167442\|32\|NZ_CP007532\|PILER-CR	167442-167473	32	NZ_LR134451	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 9, complete sequence	125455-125486	8	0.75
NZ_CP007532_1	1.14\|167442\|32\|NZ_CP007532\|PILER-CR	167442-167473	32	NZ_CP031226	Pseudomonas amygdali pv. lachrymans str. M301315 plasmid pMPPla107, complete sequence	858974-859005	8	0.75
NZ_CP007532_1	1.18\|167001\|32\|NZ_CP007532\|CRT	167001-167032	32	CP011833	Geobacillus sp. 12AMOR1 plasmid pGARCT, complete sequence	2088-2119	8	0.75
NZ_CP007532_1	1.18\|167001\|32\|NZ_CP007532\|CRT	167001-167032	32	CP017693	Geobacillus lituanicus strain N-3 plasmid pLDW-3, complete sequence	19797-19828	8	0.75
NZ_CP007532_1	1.18\|167001\|32\|NZ_CP007532\|CRT	167001-167032	32	MN693285	Marine virus AFVG_25M368, complete genome	1786-1817	8	0.75
NZ_CP007532_1	1.18\|167001\|32\|NZ_CP007532\|CRT	167001-167032	32	MK448920	Streptococcus phage Javan372, complete genome	12534-12565	8	0.75
NZ_CP007532_1	1.23\|167306\|32\|NZ_CP007532\|CRT,CRISPRCasFinder	167306-167337	32	NZ_LR217714	Candidatus Erwinia haradaeae strain ErCicurvipes isolate 3402 plasmid pBio	10458-10489	8	0.75
NZ_CP007532_1	1.23\|167306\|32\|NZ_CP007532\|CRT,CRISPRCasFinder	167306-167337	32	NZ_LR217714	Candidatus Erwinia haradaeae strain ErCicurvipes isolate 3402 plasmid pBio	25574-25605	8	0.75
NZ_CP007532_1	1.23\|167306\|32\|NZ_CP007532\|CRT,CRISPRCasFinder	167306-167337	32	NZ_CP013709	Clostridium botulinum strain F634 plasmid pRSJ2_2, complete sequence	8272-8303	8	0.75
NZ_CP007532_1	1.23\|167306\|32\|NZ_CP007532\|CRT,CRISPRCasFinder	167306-167337	32	NZ_CP013682	Clostridium botulinum strain 1169 plasmid pRSJ8_1, complete sequence	11837-11868	8	0.75
NZ_CP007532_1	1.23\|167306\|32\|NZ_CP007532\|CRT,CRISPRCasFinder	167306-167337	32	NZ_CP013295	Clostridium botulinum strain CDC_54064 plasmid pNPD1_1, complete sequence	22553-22584	8	0.75
NZ_CP007532_1	1.23\|167306\|32\|NZ_CP007532\|CRT,CRISPRCasFinder	167306-167337	32	NZ_CP013844	Clostridium botulinum strain A634 plasmid pRSJ19_2, complete sequence	44436-44467	8	0.75
NZ_CP007532_1	1.23\|167306\|32\|NZ_CP007532\|CRT,CRISPRCasFinder	167306-167337	32	NZ_MK275623	Clostridium perfringens strain JXJA17 plasmid p5, complete sequence	27234-27265	8	0.75
NZ_CP007532_1	1.23\|167306\|32\|NZ_CP007532\|CRT,CRISPRCasFinder	167306-167337	32	MT787017	UNVERIFIED: Staphylococcus phage WV, complete genome	5044-5075	8	0.75
NZ_CP007532_1	1.25\|167428\|32\|NZ_CP007532\|CRT,CRISPRCasFinder	167428-167459	32	NZ_LR134451	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 9, complete sequence	125455-125486	8	0.75
NZ_CP007532_1	1.25\|167428\|32\|NZ_CP007532\|CRT,CRISPRCasFinder	167428-167459	32	NZ_CP031226	Pseudomonas amygdali pv. lachrymans str. M301315 plasmid pMPPla107, complete sequence	858974-859005	8	0.75
NZ_CP007532_2	2.2\|183906\|32\|NZ_CP007532\|CRISPRCasFinder,CRT,PILER-CR	183906-183937	32	NZ_CP029452	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence	2052295-2052326	8	0.75
NZ_CP007532_2	2.2\|183906\|32\|NZ_CP007532\|CRISPRCasFinder,CRT,PILER-CR	183906-183937	32	NC_008826	Methylibium petroleiphilum PM1 plasmid RPME01, complete sequence	343727-343758	8	0.75
NZ_CP007532_1	1.3\|166777\|32\|NZ_CP007532\|CRISPRCasFinder,CRT,PILER-CR	166777-166808	32	MH538193	Bacillus phage Saddex, complete genome	117278-117309	9	0.719
NZ_CP007532_1	1.3\|166777\|32\|NZ_CP007532\|CRISPRCasFinder,CRT,PILER-CR	166777-166808	32	MG763894	Bacillus phage HonestAbe, complete genome	116177-116208	9	0.719
NZ_CP007532_1	1.3\|166777\|32\|NZ_CP007532\|CRISPRCasFinder,CRT,PILER-CR	166777-166808	32	NC_031116	Bacillus phage Zuko, complete genome	116979-117010	9	0.719
NZ_CP007532_1	1.4\|166838\|32\|NZ_CP007532\|CRISPRCasFinder,CRT,PILER-CR	166838-166869	32	NZ_CP011121	Acetobacter oryzifermentans strain SLV-7 plasmid unnamed1, complete sequence	147570-147601	9	0.719
NZ_CP007532_1	1.4\|166838\|32\|NZ_CP007532\|CRISPRCasFinder,CRT,PILER-CR	166838-166869	32	NZ_CP006368	Aureimonas sp. AU20 plasmid pAU20a, complete sequence	371335-371366	9	0.719
NZ_CP007532_1	1.4\|166838\|32\|NZ_CP007532\|CRISPRCasFinder,CRT,PILER-CR	166838-166869	32	NZ_CP023658	Acetobacter pomorum strain BDGP5 plasmid pApBDGP5A, complete sequence	79558-79589	9	0.719
NZ_CP007532_1	1.4\|166838\|32\|NZ_CP007532\|CRISPRCasFinder,CRT,PILER-CR	166838-166869	32	NZ_CP030872	Acetobacter sp. JWB plasmid unnamed1, complete sequence	80406-80437	9	0.719
NZ_CP007532_1	1.4\|166838\|32\|NZ_CP007532\|CRISPRCasFinder,CRT,PILER-CR	166838-166869	32	NZ_CP021511	Acetobacter pasteurianus subsp. pasteurianus strain SRCM101342 plasmid pAP1342-2, complete sequence	1685-1716	9	0.719
NZ_CP007532_1	1.4\|166838\|32\|NZ_CP007532\|CRISPRCasFinder,CRT,PILER-CR	166838-166869	32	NZ_CP039847	Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-2, complete sequence	17724-17755	9	0.719
NZ_CP007532_1	1.5\|166899\|32\|NZ_CP007532\|CRISPRCasFinder,CRT,PILER-CR	166899-166930	32	NZ_CP022220	Bradyrhizobium guangxiense strain CCBAU 53363 plasmid p53363, complete sequence	486062-486093	9	0.719
NZ_CP007532_1	1.5\|166899\|32\|NZ_CP007532\|CRISPRCasFinder,CRT,PILER-CR	166899-166930	32	NZ_CP030052	Bradyrhizobium guangdongense strain CCBAU 51649 plasmid unnamed, complete sequence	96178-96209	9	0.719
NZ_CP007532_1	1.5\|166899\|32\|NZ_CP007532\|CRISPRCasFinder,CRT,PILER-CR	166899-166930	32	NZ_CP030054	Bradyrhizobium guangzhouense strain CCBAU 51670 plasmid unnamed1, complete sequence	278427-278458	9	0.719
NZ_CP007532_1	1.12\|167320\|32\|NZ_CP007532\|PILER-CR	167320-167351	32	AB853331	Staphylococcus phage S25-4 DNA, complete genome	130762-130793	9	0.719
NZ_CP007532_1	1.12\|167320\|32\|NZ_CP007532\|PILER-CR	167320-167351	32	NC_022920	Staphylococcus phage S25-3 DNA, complete genome	137194-137225	9	0.719
NZ_CP007532_1	1.15\|167503\|32\|NZ_CP007532\|PILER-CR	167503-167534	32	NZ_CP007515	Rubrobacter radiotolerans strain RSPS-4 plasmid 1, complete sequence	123101-123132	9	0.719
NZ_CP007532_1	1.23\|167306\|32\|NZ_CP007532\|CRT,CRISPRCasFinder	167306-167337	32	AB853331	Staphylococcus phage S25-4 DNA, complete genome	130762-130793	9	0.719
NZ_CP007532_1	1.23\|167306\|32\|NZ_CP007532\|CRT,CRISPRCasFinder	167306-167337	32	NC_022920	Staphylococcus phage S25-3 DNA, complete genome	137194-137225	9	0.719
NZ_CP007532_1	1.26\|167489\|32\|NZ_CP007532\|CRT,CRISPRCasFinder	167489-167520	32	NZ_CP007515	Rubrobacter radiotolerans strain RSPS-4 plasmid 1, complete sequence	123101-123132	9	0.719
NZ_CP007532_2	2.5\|184089\|32\|NZ_CP007532\|CRISPRCasFinder,CRT,PILER-CR	184089-184120	32	NZ_LT900339	Gluconobacter oxydans 621H isolate WT-DSMZ plasmid 2	160320-160351	9	0.719
NZ_CP007532_2	2.5\|184089\|32\|NZ_CP007532\|CRISPRCasFinder,CRT,PILER-CR	184089-184120	32	NC_006672	Gluconobacter oxydans 621H plasmid pGOX1, complete sequence	160319-160350	9	0.719
NZ_CP007532_2	2.10\|184394\|32\|NZ_CP007532\|CRISPRCasFinder,CRT,PILER-CR	184394-184425	32	NC_009939	Deinococcus geothermalis DSM 11300 plasmid pDGEO02, complete sequence	60325-60356	9	0.719
NZ_CP007532_2	2.11\|184455\|32\|NZ_CP007532\|CRISPRCasFinder,CRT,PILER-CR	184455-184486	32	NZ_CP020897	Rhizobium phaseoli Brasil 5 strain Bra5 plasmid pRphaBra5a, complete sequence	169379-169410	9	0.719
NZ_CP007532_2	2.11\|184455\|32\|NZ_CP007532\|CRISPRCasFinder,CRT,PILER-CR	184455-184486	32	NC_007764	Rhizobium etli CFN 42 plasmid p42c, complete sequence	159671-159702	9	0.719
NZ_CP007532_2	2.11\|184455\|32\|NZ_CP007532\|CRISPRCasFinder,CRT,PILER-CR	184455-184486	32	NZ_CP021026	Rhizobium sp. TAL182 plasmid pRetTAL182b, complete sequence	180711-180742	9	0.719
NZ_CP007532_2	2.11\|184455\|32\|NZ_CP007532\|CRISPRCasFinder,CRT,PILER-CR	184455-184486	32	NZ_CP013631	Rhizobium sp. N324 plasmid pRspN324a, complete sequence	214772-214803	9	0.719
NZ_CP007532_2	2.11\|184455\|32\|NZ_CP007532\|CRISPRCasFinder,CRT,PILER-CR	184455-184486	32	NZ_CP013524	Rhizobium phaseoli strain R744 plasmid pRphaR744b, complete sequence	247491-247522	9	0.719
NZ_CP007532_2	2.11\|184455\|32\|NZ_CP007532\|CRISPRCasFinder,CRT,PILER-CR	184455-184486	32	NZ_CP020908	Rhizobium etli strain NXC12 plasmid pRetNXC12b, complete sequence	172552-172583	9	0.719
NZ_CP007532_2	2.11\|184455\|32\|NZ_CP007532\|CRISPRCasFinder,CRT,PILER-CR	184455-184486	32	NZ_CP013597	Rhizobium sp. N741 plasmid pRspN741b, complete sequence	214092-214123	9	0.719
NZ_CP007532_2	2.11\|184455\|32\|NZ_CP007532\|CRISPRCasFinder,CRT,PILER-CR	184455-184486	32	NZ_CP013576	Rhizobium phaseoli strain N671 plasmid pRphaN671b, complete sequence	258716-258747	9	0.719
NZ_CP007532_2	2.11\|184455\|32\|NZ_CP007532\|CRISPRCasFinder,CRT,PILER-CR	184455-184486	32	NZ_CP013548	Rhizobium phaseoli strain R611 plasmid pRetR611a, complete sequence	258714-258745	9	0.719
NZ_CP007532_2	2.11\|184455\|32\|NZ_CP007532\|CRISPRCasFinder,CRT,PILER-CR	184455-184486	32	NZ_CP013528	Rhizobium phaseoli strain R723 plasmid pRphaR723a, complete sequence	256995-257026	9	0.719
NZ_CP007532_2	2.11\|184455\|32\|NZ_CP007532\|CRISPRCasFinder,CRT,PILER-CR	184455-184486	32	NZ_CP013533	Rhizobium phaseoli strain R650 plasmid pRphaR650a, complete sequence	258714-258745	9	0.719
NZ_CP007532_2	2.11\|184455\|32\|NZ_CP007532\|CRISPRCasFinder,CRT,PILER-CR	184455-184486	32	NZ_CP013543	Rhizobium phaseoli strain R620 plasmid pRphaR620a, complete sequence	262126-262157	9	0.719
NZ_CP007532_2	2.11\|184455\|32\|NZ_CP007532\|CRISPRCasFinder,CRT,PILER-CR	184455-184486	32	NC_021907	Rhizobium etli bv. mimosae str. Mim1 plasmid pRetMIM1b, complete sequence	175083-175114	9	0.719
NZ_CP007532_2	2.11\|184455\|32\|NZ_CP007532\|CRISPRCasFinder,CRT,PILER-CR	184455-184486	32	NZ_CP013501	Rhizobium esperanzae strain N561 plasmid pRspN561a, complete sequence	214458-214489	9	0.719
NZ_CP007532_2	2.11\|184455\|32\|NZ_CP007532\|CRISPRCasFinder,CRT,PILER-CR	184455-184486	32	NZ_CP013581	Rhizobium phaseoli strain N261 plasmid pRphaN261a, complete sequence	256998-257029	9	0.719
NZ_CP007532_2	2.11\|184455\|32\|NZ_CP007532\|CRISPRCasFinder,CRT,PILER-CR	184455-184486	32	NZ_CP013507	Rhizobium sp. N1341 plasmid pRspN1341b, complete sequence	214092-214123	9	0.719
NZ_CP007532_2	2.11\|184455\|32\|NZ_CP007532\|CRISPRCasFinder,CRT,PILER-CR	184455-184486	32	NZ_CP013518	Rhizobium sp. N113 plasmid pRspN113a, complete sequence	214458-214489	9	0.719
NZ_CP007532_2	2.11\|184455\|32\|NZ_CP007532\|CRISPRCasFinder,CRT,PILER-CR	184455-184486	32	NZ_CP013570	Rhizobium phaseoli strain N771 plasmid pRphaN771b, complete sequence	258716-258747	9	0.719
NZ_CP007532_2	2.11\|184455\|32\|NZ_CP007532\|CRISPRCasFinder,CRT,PILER-CR	184455-184486	32	NZ_CP013491	Rhizobium sp. N6212 plasmid pRspN6212a, complete sequence	214461-214492	9	0.719
NZ_CP007532_2	2.11\|184455\|32\|NZ_CP007532\|CRISPRCasFinder,CRT,PILER-CR	184455-184486	32	NZ_CP013513	Rhizobium sp. N1314 plasmid pRspN1314b, complete sequence	235341-235372	9	0.719
NZ_CP007532_2	2.11\|184455\|32\|NZ_CP007532\|CRISPRCasFinder,CRT,PILER-CR	184455-184486	32	NZ_CP013496	Rhizobium sp. N621 plasmid pRspN621a, complete sequence	214461-214492	9	0.719
NZ_CP007532_2	2.11\|184455\|32\|NZ_CP007532\|CRISPRCasFinder,CRT,PILER-CR	184455-184486	32	NZ_CP013591	Rhizobium sp. N871 plasmid pRspN871a, complete sequence	214461-214492	9	0.719
NZ_CP007532_2	2.11\|184455\|32\|NZ_CP007532\|CRISPRCasFinder,CRT,PILER-CR	184455-184486	32	NZ_CP013603	Rhizobium sp. N731 plasmid pRspN731b, complete sequence	235341-235372	9	0.719
NZ_CP007532_2	2.11\|184455\|32\|NZ_CP007532\|CRISPRCasFinder,CRT,PILER-CR	184455-184486	32	NZ_CP035002	Rhizobium acidisoli strain FH23 plasmid pRapFH23d, complete sequence	412551-412582	9	0.719
NZ_CP007532_1	1.2\|166716\|32\|NZ_CP007532\|CRISPRCasFinder,CRT,PILER-CR	166716-166747	32	MH356729	Pseudomonas phage LP14, complete genome	61752-61783	10	0.688
NZ_CP007532_1	1.7\|167015\|32\|NZ_CP007532\|PILER-CR	167015-167046	32	NZ_CP024793	Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence	682125-682156	10	0.688
NZ_CP007532_1	1.8\|167076\|32\|NZ_CP007532\|PILER-CR	167076-167107	32	NZ_CP040096	Pantoea sp. SO10 plasmid unnamed1, complete sequence	721670-721701	10	0.688
NZ_CP007532_1	1.12\|167320\|32\|NZ_CP007532\|PILER-CR	167320-167351	32	MN045228	Staphylococcus phage Maine, complete genome	39880-39911	10	0.688
NZ_CP007532_1	1.18\|167001\|32\|NZ_CP007532\|CRT	167001-167032	32	NZ_CP024793	Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence	682125-682156	10	0.688
NZ_CP007532_1	1.19\|167062\|32\|NZ_CP007532\|CRT,CRISPRCasFinder	167062-167093	32	NZ_CP040096	Pantoea sp. SO10 plasmid unnamed1, complete sequence	721670-721701	10	0.688
NZ_CP007532_1	1.23\|167306\|32\|NZ_CP007532\|CRT,CRISPRCasFinder	167306-167337	32	MN045228	Staphylococcus phage Maine, complete genome	39880-39911	10	0.688
NZ_CP007532_2	2.7\|184211\|32\|NZ_CP007532\|CRISPRCasFinder,CRT,PILER-CR	184211-184242	32	MT446416	UNVERIFIED: Escherichia virus TH47, complete genome	171800-171831	10	0.688
NZ_CP007532_2	2.8\|184272\|32\|NZ_CP007532\|CRISPRCasFinder,CRT,PILER-CR	184272-184303	32	NZ_CP019203	Salmonella enterica subsp. enterica serovar Infantis strain CFSAN003307 plasmid pCFSAN003307, complete sequence	24313-24344	10	0.688
NZ_CP007532_2	2.8\|184272\|32\|NZ_CP007532\|CRISPRCasFinder,CRT,PILER-CR	184272-184303	32	NZ_LN868945	Salmonella enterica subsp. enterica serovar Senftenberg strain NCTC10384 plasmid 3, complete sequence	21195-21226	10	0.688
NZ_CP007532_1	1.12\|167320\|32\|NZ_CP007532\|PILER-CR	167320-167351	32	NC_010371	Finegoldia magna ATCC 29328 plasmid pFMC, complete sequence	8998-9029	11	0.656
NZ_CP007532_1	1.23\|167306\|32\|NZ_CP007532\|CRT,CRISPRCasFinder	167306-167337	32	NC_010371	Finegoldia magna ATCC 29328 plasmid pFMC, complete sequence	8998-9029	11	0.656
NZ_CP007532_2	2.11\|184455\|32\|NZ_CP007532\|CRISPRCasFinder,CRT,PILER-CR	184455-184486	32	NZ_CP012186	Pseudonocardia sp. EC080619-01 plasmid pBCI1-1, complete sequence	6393-6424	11	0.656
NZ_CP007532_1	1.5\|166899\|32\|NZ_CP007532\|CRISPRCasFinder,CRT,PILER-CR	166899-166930	32	NZ_AP018666	Sphingobium amiense strain DSM 16289 plasmid pSAMIE_3, complete sequence	31224-31255	13	0.594
NZ_CP007532_1	1.5\|166899\|32\|NZ_CP007532\|CRISPRCasFinder,CRT,PILER-CR	166899-166930	32	NZ_CP018821	Sphingomonas koreensis strain ABOJV plasmid tig00000001, complete sequence	66917-66948	13	0.594
NZ_CP007532_1	1.12\|167320\|32\|NZ_CP007532\|PILER-CR	167320-167351	32	NZ_CP014152	Clostridium botulinum strain BrDura plasmid pRSJ20_1, complete sequence	216290-216321	16	0.5
NZ_CP007532_1	1.12\|167320\|32\|NZ_CP007532\|PILER-CR	167320-167351	32	NZ_CP006909	Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence	43663-43694	16	0.5
NZ_CP007532_1	1.12\|167320\|32\|NZ_CP007532\|PILER-CR	167320-167351	32	NZ_CP013684	Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence	185477-185508	16	0.5
NZ_CP007532_1	1.12\|167320\|32\|NZ_CP007532\|PILER-CR	167320-167351	32	NZ_CP013710	Clostridium botulinum strain F634 plasmid pRSJ2_3, complete sequence	63064-63095	16	0.5
NZ_CP007532_1	1.12\|167320\|32\|NZ_CP007532\|PILER-CR	167320-167351	32	NC_010418	Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence	239807-239838	16	0.5
NZ_CP007532_1	1.12\|167320\|32\|NZ_CP007532\|PILER-CR	167320-167351	32	NZ_CP013700	Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence	251147-251178	16	0.5
NZ_CP007532_1	1.12\|167320\|32\|NZ_CP007532\|PILER-CR	167320-167351	32	NC_025146	Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111	163536-163567	16	0.5
NZ_CP007532_1	1.12\|167320\|32\|NZ_CP007532\|PILER-CR	167320-167351	32	NC_012654	Clostridium botulinum Ba4 str. 657 plasmid pCLJ, complete sequence	193647-193678	16	0.5
NZ_CP007532_1	1.12\|167320\|32\|NZ_CP007532\|PILER-CR	167320-167351	32	NZ_CP031095	Clostridium botulinum strain CFSAN034200 plasmid p1_CDC51232, complete sequence	188505-188536	16	0.5
NZ_CP007532_1	1.23\|167306\|32\|NZ_CP007532\|CRT,CRISPRCasFinder	167306-167337	32	NZ_CP014152	Clostridium botulinum strain BrDura plasmid pRSJ20_1, complete sequence	216290-216321	16	0.5
NZ_CP007532_1	1.23\|167306\|32\|NZ_CP007532\|CRT,CRISPRCasFinder	167306-167337	32	NZ_CP006909	Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence	43663-43694	16	0.5
NZ_CP007532_1	1.23\|167306\|32\|NZ_CP007532\|CRT,CRISPRCasFinder	167306-167337	32	NZ_CP013684	Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence	185477-185508	16	0.5
NZ_CP007532_1	1.23\|167306\|32\|NZ_CP007532\|CRT,CRISPRCasFinder	167306-167337	32	NZ_CP013710	Clostridium botulinum strain F634 plasmid pRSJ2_3, complete sequence	63064-63095	16	0.5
NZ_CP007532_1	1.23\|167306\|32\|NZ_CP007532\|CRT,CRISPRCasFinder	167306-167337	32	NC_010418	Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence	239807-239838	16	0.5
NZ_CP007532_1	1.23\|167306\|32\|NZ_CP007532\|CRT,CRISPRCasFinder	167306-167337	32	NZ_CP013700	Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence	251147-251178	16	0.5
NZ_CP007532_1	1.23\|167306\|32\|NZ_CP007532\|CRT,CRISPRCasFinder	167306-167337	32	NC_025146	Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111	163536-163567	16	0.5
NZ_CP007532_1	1.23\|167306\|32\|NZ_CP007532\|CRT,CRISPRCasFinder	167306-167337	32	NC_012654	Clostridium botulinum Ba4 str. 657 plasmid pCLJ, complete sequence	193647-193678	16	0.5
NZ_CP007532_1	1.23\|167306\|32\|NZ_CP007532\|CRT,CRISPRCasFinder	167306-167337	32	NZ_CP031095	Clostridium botulinum strain CFSAN034200 plasmid p1_CDC51232, complete sequence	188505-188536	16	0.5

1. spacer 1.17|167625|32|NZ_CP007532|PILER-CR matches to NC_049343 (Escherichia phage 500465-2, complete genome) position: , mismatch: 1, identity: 0.969

ccgtcgtgctgttatccaccacgtcataccag	CRISPR spacer
ccgtggtgctgttatccaccacgtcataccag	Protospacer
**** ***************************

2. spacer 1.17|167625|32|NZ_CP007532|PILER-CR matches to KP063541 (Enterobacteria phage P88, complete genome) position: , mismatch: 1, identity: 0.969

ccgtcgtgctgttatccaccacgtcataccag	CRISPR spacer
ccgtggtgctgttatccaccacgtcataccag	Protospacer
**** ***************************

3. spacer 1.28|167611|32|NZ_CP007532|CRT,CRISPRCasFinder matches to NC_049343 (Escherichia phage 500465-2, complete genome) position: , mismatch: 1, identity: 0.969

ccgtcgtgctgttatccaccacgtcataccag	CRISPR spacer
ccgtggtgctgttatccaccacgtcataccag	Protospacer
**** ***************************

4. spacer 1.28|167611|32|NZ_CP007532|CRT,CRISPRCasFinder matches to KP063541 (Enterobacteria phage P88, complete genome) position: , mismatch: 1, identity: 0.969

ccgtcgtgctgttatccaccacgtcataccag	CRISPR spacer
ccgtggtgctgttatccaccacgtcataccag	Protospacer
**** ***************************

5. spacer 1.17|167625|32|NZ_CP007532|PILER-CR matches to NZ_MK439959 (Escherichia coli strain Ec-2Lar plasmid pC-Ec2-KPC, complete sequence) position: , mismatch: 2, identity: 0.938

ccgtcgtgctgttatccaccacgtcataccag	CRISPR spacer
ccgtggtgccgttatccaccacgtcataccag	Protospacer
**** ****.**********************

6. spacer 1.28|167611|32|NZ_CP007532|CRT,CRISPRCasFinder matches to NZ_MK439959 (Escherichia coli strain Ec-2Lar plasmid pC-Ec2-KPC, complete sequence) position: , mismatch: 2, identity: 0.938

ccgtcgtgctgttatccaccacgtcataccag	CRISPR spacer
ccgtggtgccgttatccaccacgtcataccag	Protospacer
**** ****.**********************

7. spacer 1.17|167625|32|NZ_CP007532|PILER-CR matches to NC_049341 (Escherichia phage 503458, complete genome) position: , mismatch: 3, identity: 0.906

ccgtcgtgctgttatccaccacgtcataccag	CRISPR spacer
tcgtggtgccgttatccaccacgtcataccag	Protospacer
.*** ****.**********************

8. spacer 1.17|167625|32|NZ_CP007532|PILER-CR matches to CP025923 (Escherichia phage sp. chromosome, complete genome) position: , mismatch: 3, identity: 0.906

ccgtcgtgctgttatccaccacgtcataccag	CRISPR spacer
tcgtggtgccgttatccaccacgtcataccag	Protospacer
.*** ****.**********************

9. spacer 1.17|167625|32|NZ_CP007532|PILER-CR matches to NC_049344 (Escherichia phage 520873, complete genome) position: , mismatch: 3, identity: 0.906

ccgtcgtgctgttatccaccacgtcataccag	CRISPR spacer
tcgtggtgccgttatccaccacgtcataccag	Protospacer
.*** ****.**********************

10. spacer 1.17|167625|32|NZ_CP007532|PILER-CR matches to NC_049391 (Escherichia virus P88_4B11 genome assembly, chromosome: 1) position: , mismatch: 3, identity: 0.906

ccgtcgtgctgttatccaccacgtcataccag	CRISPR spacer
tcgtggtgccgttatccaccacgtcataccag	Protospacer
.*** ****.**********************

11. spacer 1.28|167611|32|NZ_CP007532|CRT,CRISPRCasFinder matches to NC_049341 (Escherichia phage 503458, complete genome) position: , mismatch: 3, identity: 0.906

ccgtcgtgctgttatccaccacgtcataccag	CRISPR spacer
tcgtggtgccgttatccaccacgtcataccag	Protospacer
.*** ****.**********************

12. spacer 1.28|167611|32|NZ_CP007532|CRT,CRISPRCasFinder matches to CP025923 (Escherichia phage sp. chromosome, complete genome) position: , mismatch: 3, identity: 0.906

ccgtcgtgctgttatccaccacgtcataccag	CRISPR spacer
tcgtggtgccgttatccaccacgtcataccag	Protospacer
.*** ****.**********************

13. spacer 1.28|167611|32|NZ_CP007532|CRT,CRISPRCasFinder matches to NC_049344 (Escherichia phage 520873, complete genome) position: , mismatch: 3, identity: 0.906

ccgtcgtgctgttatccaccacgtcataccag	CRISPR spacer
tcgtggtgccgttatccaccacgtcataccag	Protospacer
.*** ****.**********************

14. spacer 1.28|167611|32|NZ_CP007532|CRT,CRISPRCasFinder matches to NC_049391 (Escherichia virus P88_4B11 genome assembly, chromosome: 1) position: , mismatch: 3, identity: 0.906

ccgtcgtgctgttatccaccacgtcataccag	CRISPR spacer
tcgtggtgccgttatccaccacgtcataccag	Protospacer
.*** ****.**********************

15. spacer 2.2|183906|32|NZ_CP007532|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024424 (Paracoccus yeei strain TT13 plasmid pTT13-2, complete sequence) position: , mismatch: 5, identity: 0.844

-acggcaacggatgcgaccgccagcgcgatccc	CRISPR spacer
tgcggc-acggatgaggccgccagcgcgatctc	Protospacer
 .**** ******* *.**************.*

16. spacer 2.2|183906|32|NZ_CP007532|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020440 (Paracoccus yeei strain FDAARGOS_252 plasmid unnamed2, complete sequence) position: , mismatch: 5, identity: 0.844

-acggcaacggatgcgaccgccagcgcgatccc	CRISPR spacer
tgcggc-acggatgaggccgccagcgcgatctc	Protospacer
 .**** ******* *.**************.*

17. spacer 2.2|183906|32|NZ_CP007532|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP044082 (Paracoccus yeei strain FDAARGOS_643 plasmid unnamed4, complete sequence) position: , mismatch: 5, identity: 0.844

-acggcaacggatgcgaccgccagcgcgatccc	CRISPR spacer
tgcggc-acggatgaggccgccagcgcgatctc	Protospacer
 .**** ******* *.**************.*

18. spacer 2.2|183906|32|NZ_CP007532|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP031080 (Paracoccus yeei strain CCUG 32053 plasmid pYEE2, complete sequence) position: , mismatch: 6, identity: 0.812

-acggcaacggatgcgaccgccagcgcgatccc	CRISPR spacer
tgcggc-acggatgaggccgccagcgcgatctg	Protospacer
 .**** ******* *.**************.

19. spacer 2.13|184577|32|NZ_CP007532|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP035189 (Bacillus licheniformis strain SRCM103914 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.812

tgcctgataataagtgtgtctcctggttctgg	CRISPR spacer
tgcttgataataagtgtgtctcctgcattgag	Protospacer
***.*********************  *. .*

20. spacer 3.1|1936316|29|NZ_CP007532|CRISPRCasFinder matches to MN609868 (Erysiphales associated levi-like virus 1 isolate PM-A_DN30821 hypothetical protein, putative capsid protein, and putative RdRp genes, complete cds) position: , mismatch: 6, identity: 0.793

tgccatcaggcataaaccaatccttgagc	CRISPR spacer
tgccaacaggcataaaccaatcgacgacg	Protospacer
***** ****************  .**

21. spacer 1.10|167198|32|NZ_CP007532|PILER-CR matches to NZ_CP043441 (Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

gctattgatttccgccagcgacaggtgatcgc-	CRISPR spacer
gctgttgatgtccgccagcgacacgc-cttgcg	Protospacer
***.***** ************* *.  *.**

22. spacer 1.12|167320|32|NZ_CP007532|PILER-CR matches to NZ_CP019175 (Salmonella enterica subsp. enterica serovar Give strain CFSAN024229 plasmid pCFSAN024229, complete sequence) position: , mismatch: 7, identity: 0.781

--taggttatttaacatatatataactatatatt	CRISPR spacer
cgcagctaa--taatatatatataattatatatt	Protospacer
  .** * *  ***.**********.********

23. spacer 1.12|167320|32|NZ_CP007532|PILER-CR matches to NC_012657 (Clostridium botulinum Ba4 str. 657 plasmid pCLJ2, complete sequence) position: , mismatch: 7, identity: 0.781

taggttat-ttaacatatatataactatatatt	CRISPR spacer
-atataataataacttatatataactatatttt	Protospacer
 * .* **  **** *************** **

24. spacer 1.12|167320|32|NZ_CP007532|PILER-CR matches to NZ_CP031096 (Clostridium botulinum strain CFSAN034200 plasmid p2_CDC51232, complete sequence) position: , mismatch: 7, identity: 0.781

taggttat-ttaacatatatataactatatatt	CRISPR spacer
-atataataataacttatatataactatatttt	Protospacer
 * .* **  **** *************** **

25. spacer 1.15|167503|32|NZ_CP007532|PILER-CR matches to NZ_CP009453 (Sphingopyxis sp. 113P3 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

accgcccgcacgctgaccggacgcaagcgacg----	CRISPR spacer
atcgccagcccgctgaccggacgca----acgcctt	Protospacer
*.**** ** ***************    ***

26. spacer 1.21|167184|32|NZ_CP007532|CRT,CRISPRCasFinder matches to NZ_CP043441 (Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

gctattgatttccgccagcgacaggtgatcgc-	CRISPR spacer
gctgttgatgtccgccagcgacacgc-cttgcg	Protospacer
***.***** ************* *.  *.**

27. spacer 1.23|167306|32|NZ_CP007532|CRT,CRISPRCasFinder matches to NZ_CP019175 (Salmonella enterica subsp. enterica serovar Give strain CFSAN024229 plasmid pCFSAN024229, complete sequence) position: , mismatch: 7, identity: 0.781

--taggttatttaacatatatataactatatatt	CRISPR spacer
cgcagctaa--taatatatatataattatatatt	Protospacer
  .** * *  ***.**********.********

28. spacer 1.23|167306|32|NZ_CP007532|CRT,CRISPRCasFinder matches to NC_012657 (Clostridium botulinum Ba4 str. 657 plasmid pCLJ2, complete sequence) position: , mismatch: 7, identity: 0.781

taggttat-ttaacatatatataactatatatt	CRISPR spacer
-atataataataacttatatataactatatttt	Protospacer
 * .* **  **** *************** **

29. spacer 1.23|167306|32|NZ_CP007532|CRT,CRISPRCasFinder matches to NZ_CP031096 (Clostridium botulinum strain CFSAN034200 plasmid p2_CDC51232, complete sequence) position: , mismatch: 7, identity: 0.781

taggttat-ttaacatatatataactatatatt	CRISPR spacer
-atataataataacttatatataactatatttt	Protospacer
 * .* **  **** *************** **

30. spacer 1.26|167489|32|NZ_CP007532|CRT,CRISPRCasFinder matches to NZ_CP009453 (Sphingopyxis sp. 113P3 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

accgcccgcacgctgaccggacgcaagcgacg----	CRISPR spacer
atcgccagcccgctgaccggacgca----acgcctt	Protospacer
*.**** ** ***************    ***

31. spacer 2.2|183906|32|NZ_CP007532|CRISPRCasFinder,CRT,PILER-CR matches to NC_009621 (Sinorhizobium medicae WSM419 plasmid pSMED02, complete sequence) position: , mismatch: 7, identity: 0.781

-acggcaacggatgcgaccgccagcgcgatccc	CRISPR spacer
cgcgccga-ggaagcgaccgccagcgcgagccg	Protospacer
 .** *.* *** **************** **

32. spacer 2.7|184211|32|NZ_CP007532|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025980 (Escherichia marmotae strain HT073016 plasmid pEM148, complete sequence) position: , mismatch: 7, identity: 0.781

gacggactggaaaaactcatcatttctgaaga	CRISPR spacer
gaatttctggaaaaactcagcatgtctgaagc	Protospacer
**    ************* *** *******

33. spacer 2.7|184211|32|NZ_CP007532|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025980 (Escherichia marmotae strain HT073016 plasmid pEM148, complete sequence) position: , mismatch: 7, identity: 0.781

gacggactggaaaaactcatcatttctgaaga	CRISPR spacer
gaatttctggaaaaactcagcatgtctgaagc	Protospacer
**    ************* *** *******

34. spacer 2.7|184211|32|NZ_CP007532|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025980 (Escherichia marmotae strain HT073016 plasmid pEM148, complete sequence) position: , mismatch: 7, identity: 0.781

gacggactggaaaaactcatcatttctgaaga	CRISPR spacer
gaatttctggaaaaactcagcatgtctgaagc	Protospacer
**    ************* *** *******

35. spacer 1.2|166716|32|NZ_CP007532|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP049159 (Caballeronia sp. SBC1 plasmid pSBC1_3, complete sequence) position: , mismatch: 8, identity: 0.75

ctcctcggtagttttcgctgtgcgcccgtaaa-----	CRISPR spacer
cgcctcggtcgttttcgctgcgcgc-----aacggcc	Protospacer
* ******* **********.****     **

36. spacer 1.2|166716|32|NZ_CP007532|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP049320 (Caballeronia sp. SBC2 plasmid pSBC2-4, complete sequence) position: , mismatch: 8, identity: 0.75

ctcctcggtagttttcgctgtgcgcccgtaaa-----	CRISPR spacer
cgcctcggtcgttttcgctgcgcgc-----aacggcc	Protospacer
* ******* **********.****     **

37. spacer 1.5|166899|32|NZ_CP007532|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP023451 (Rhizorhabdus dicambivorans strain Ndbn-20 plasmid p2, complete sequence) position: , mismatch: 8, identity: 0.75

ggctcccatttcgcgagcgcgctagcgctggc	CRISPR spacer
ggtggccattgcgcgagcgcgccagcgctcag	Protospacer
**.  ***** ***********.****** .

38. spacer 1.5|166899|32|NZ_CP007532|CRISPRCasFinder,CRT,PILER-CR matches to CP021185 (Sphingomonas wittichii DC-6 plasmid pDC04, complete sequence) position: , mismatch: 8, identity: 0.75

ggctcccatttcgcgagcgcgctagcgctggc	CRISPR spacer
ggtggccattgcgcgagcgcgccagcgctcag	Protospacer
**.  ***** ***********.****** .

39. spacer 1.7|167015|32|NZ_CP007532|PILER-CR matches to CP011833 (Geobacillus sp. 12AMOR1 plasmid pGARCT, complete sequence) position: , mismatch: 8, identity: 0.75

ttctgcaattcttttagaatctgcattaatag	CRISPR spacer
tcggacaattctttcagaatctgcatgaatgc	Protospacer
*.  .*********.*********** ***.

40. spacer 1.7|167015|32|NZ_CP007532|PILER-CR matches to CP017693 (Geobacillus lituanicus strain N-3 plasmid pLDW-3, complete sequence) position: , mismatch: 8, identity: 0.75

ttctgcaattcttttagaatctgcattaatag	CRISPR spacer
tcggacaattctttcagaatctgcatgaatgc	Protospacer
*.  .*********.*********** ***.

41. spacer 1.7|167015|32|NZ_CP007532|PILER-CR matches to MN693285 (Marine virus AFVG_25M368, complete genome) position: , mismatch: 8, identity: 0.75

ttctgcaattcttttagaatctgcattaatag	CRISPR spacer
tgtcgcaattcttttgcaatctgcattagcat	Protospacer
* ..***********. ***********..*

42. spacer 1.7|167015|32|NZ_CP007532|PILER-CR matches to MK448920 (Streptococcus phage Javan372, complete genome) position: , mismatch: 8, identity: 0.75

ttctgcaattcttttagaatctg-----cattaatag	CRISPR spacer
ttctgaaattcttttagaatatggctttcatc-----	Protospacer
***** ************** **     ***.

43. spacer 1.12|167320|32|NZ_CP007532|PILER-CR matches to NZ_LR217714 (Candidatus Erwinia haradaeae strain ErCicurvipes isolate 3402 plasmid pBio) position: , mismatch: 8, identity: 0.75

taggttatttaacatatatataactatatatt	CRISPR spacer
tcaaaaaaataacatatatataaatatatatt	Protospacer
* ..  *  ************** ********

44. spacer 1.12|167320|32|NZ_CP007532|PILER-CR matches to NZ_LR217714 (Candidatus Erwinia haradaeae strain ErCicurvipes isolate 3402 plasmid pBio) position: , mismatch: 8, identity: 0.75

taggttatttaacatatatataactatatatt	CRISPR spacer
tcaaaaaaataacatatatataaatatatatt	Protospacer
* ..  *  ************** ********

45. spacer 1.12|167320|32|NZ_CP007532|PILER-CR matches to NZ_CP013709 (Clostridium botulinum strain F634 plasmid pRSJ2_2, complete sequence) position: , mismatch: 8, identity: 0.75

taggttatttaacatatatataactatatatt	CRISPR spacer
aaaaatatttaacatatataaaactttatgat	Protospacer
 *.. *************** **** ***. *

46. spacer 1.12|167320|32|NZ_CP007532|PILER-CR matches to NZ_CP013682 (Clostridium botulinum strain 1169 plasmid pRSJ8_1, complete sequence) position: , mismatch: 8, identity: 0.75

taggttatttaacatatatataactatatatt	CRISPR spacer
aaaaatatttaacatatataaaactttatgat	Protospacer
 *.. *************** **** ***. *

47. spacer 1.12|167320|32|NZ_CP007532|PILER-CR matches to NZ_CP013295 (Clostridium botulinum strain CDC_54064 plasmid pNPD1_1, complete sequence) position: , mismatch: 8, identity: 0.75

taggttatttaacatatatataactatatatt	CRISPR spacer
aaaaatatttaacatatataaaactttatgat	Protospacer
 *.. *************** **** ***. *

48. spacer 1.12|167320|32|NZ_CP007532|PILER-CR matches to NZ_CP013844 (Clostridium botulinum strain A634 plasmid pRSJ19_2, complete sequence) position: , mismatch: 8, identity: 0.75

taggttatttaacatatatataactatatatt	CRISPR spacer
aaaaatatttaacatatataaaactttatgat	Protospacer
 *.. *************** **** ***. *

49. spacer 1.12|167320|32|NZ_CP007532|PILER-CR matches to NZ_MK275623 (Clostridium perfringens strain JXJA17 plasmid p5, complete sequence) position: , mismatch: 8, identity: 0.75

taggttatttaacatatatataactatatatt	CRISPR spacer
taaaatatttaacatttagataactataatct	Protospacer
**.. ********** ** *********  .*

50. spacer 1.12|167320|32|NZ_CP007532|PILER-CR matches to MT787017 (UNVERIFIED: Staphylococcus phage WV, complete genome) position: , mismatch: 8, identity: 0.75

taggttatttaacatatatataactatatatt-	CRISPR spacer
gattttatttaacatatttataattat-tgtaa	Protospacer
 *  ************* *****.*** *.*

51. spacer 1.14|167442|32|NZ_CP007532|PILER-CR matches to NZ_LR134451 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 9, complete sequence) position: , mismatch: 8, identity: 0.75

----gtatcaaaaatctggggagatgagggcgcgat	CRISPR spacer
gatggtcgc----atctttggagatgagggcgcgat	Protospacer
    **  *    ****  *****************

52. spacer 1.14|167442|32|NZ_CP007532|PILER-CR matches to NZ_CP031226 (Pseudomonas amygdali pv. lachrymans str. M301315 plasmid pMPPla107, complete sequence) position: , mismatch: 8, identity: 0.75

gtatcaaaaatctggggagatgagggcgcgat	CRISPR spacer
gtcatcgaaatttgcggagatgagggcgcgtt	Protospacer
**  . .****.** *************** *

53. spacer 1.18|167001|32|NZ_CP007532|CRT matches to CP011833 (Geobacillus sp. 12AMOR1 plasmid pGARCT, complete sequence) position: , mismatch: 8, identity: 0.75

ttctgcaattcttttagaatctgcattaatag	CRISPR spacer
tcggacaattctttcagaatctgcatgaatgc	Protospacer
*.  .*********.*********** ***.

54. spacer 1.18|167001|32|NZ_CP007532|CRT matches to CP017693 (Geobacillus lituanicus strain N-3 plasmid pLDW-3, complete sequence) position: , mismatch: 8, identity: 0.75

ttctgcaattcttttagaatctgcattaatag	CRISPR spacer
tcggacaattctttcagaatctgcatgaatgc	Protospacer
*.  .*********.*********** ***.

55. spacer 1.18|167001|32|NZ_CP007532|CRT matches to MN693285 (Marine virus AFVG_25M368, complete genome) position: , mismatch: 8, identity: 0.75

ttctgcaattcttttagaatctgcattaatag	CRISPR spacer
tgtcgcaattcttttgcaatctgcattagcat	Protospacer
* ..***********. ***********..*

56. spacer 1.18|167001|32|NZ_CP007532|CRT matches to MK448920 (Streptococcus phage Javan372, complete genome) position: , mismatch: 8, identity: 0.75

ttctgcaattcttttagaatctg-----cattaatag	CRISPR spacer
ttctgaaattcttttagaatatggctttcatc-----	Protospacer
***** ************** **     ***.

57. spacer 1.23|167306|32|NZ_CP007532|CRT,CRISPRCasFinder matches to NZ_LR217714 (Candidatus Erwinia haradaeae strain ErCicurvipes isolate 3402 plasmid pBio) position: , mismatch: 8, identity: 0.75

taggttatttaacatatatataactatatatt	CRISPR spacer
tcaaaaaaataacatatatataaatatatatt	Protospacer
* ..  *  ************** ********

58. spacer 1.23|167306|32|NZ_CP007532|CRT,CRISPRCasFinder matches to NZ_LR217714 (Candidatus Erwinia haradaeae strain ErCicurvipes isolate 3402 plasmid pBio) position: , mismatch: 8, identity: 0.75

taggttatttaacatatatataactatatatt	CRISPR spacer
tcaaaaaaataacatatatataaatatatatt	Protospacer
* ..  *  ************** ********

59. spacer 1.23|167306|32|NZ_CP007532|CRT,CRISPRCasFinder matches to NZ_CP013709 (Clostridium botulinum strain F634 plasmid pRSJ2_2, complete sequence) position: , mismatch: 8, identity: 0.75

taggttatttaacatatatataactatatatt	CRISPR spacer
aaaaatatttaacatatataaaactttatgat	Protospacer
 *.. *************** **** ***. *

60. spacer 1.23|167306|32|NZ_CP007532|CRT,CRISPRCasFinder matches to NZ_CP013682 (Clostridium botulinum strain 1169 plasmid pRSJ8_1, complete sequence) position: , mismatch: 8, identity: 0.75

taggttatttaacatatatataactatatatt	CRISPR spacer
aaaaatatttaacatatataaaactttatgat	Protospacer
 *.. *************** **** ***. *

61. spacer 1.23|167306|32|NZ_CP007532|CRT,CRISPRCasFinder matches to NZ_CP013295 (Clostridium botulinum strain CDC_54064 plasmid pNPD1_1, complete sequence) position: , mismatch: 8, identity: 0.75

taggttatttaacatatatataactatatatt	CRISPR spacer
aaaaatatttaacatatataaaactttatgat	Protospacer
 *.. *************** **** ***. *

62. spacer 1.23|167306|32|NZ_CP007532|CRT,CRISPRCasFinder matches to NZ_CP013844 (Clostridium botulinum strain A634 plasmid pRSJ19_2, complete sequence) position: , mismatch: 8, identity: 0.75

taggttatttaacatatatataactatatatt	CRISPR spacer
aaaaatatttaacatatataaaactttatgat	Protospacer
 *.. *************** **** ***. *

63. spacer 1.23|167306|32|NZ_CP007532|CRT,CRISPRCasFinder matches to NZ_MK275623 (Clostridium perfringens strain JXJA17 plasmid p5, complete sequence) position: , mismatch: 8, identity: 0.75

taggttatttaacatatatataactatatatt	CRISPR spacer
taaaatatttaacatttagataactataatct	Protospacer
**.. ********** ** *********  .*

64. spacer 1.23|167306|32|NZ_CP007532|CRT,CRISPRCasFinder matches to MT787017 (UNVERIFIED: Staphylococcus phage WV, complete genome) position: , mismatch: 8, identity: 0.75

taggttatttaacatatatataactatatatt-	CRISPR spacer
gattttatttaacatatttataattat-tgtaa	Protospacer
 *  ************* *****.*** *.*

65. spacer 1.25|167428|32|NZ_CP007532|CRT,CRISPRCasFinder matches to NZ_LR134451 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 9, complete sequence) position: , mismatch: 8, identity: 0.75

----gtatcaaaaatctggggagatgagggcgcgat	CRISPR spacer
gatggtcgc----atctttggagatgagggcgcgat	Protospacer
    **  *    ****  *****************

66. spacer 1.25|167428|32|NZ_CP007532|CRT,CRISPRCasFinder matches to NZ_CP031226 (Pseudomonas amygdali pv. lachrymans str. M301315 plasmid pMPPla107, complete sequence) position: , mismatch: 8, identity: 0.75

gtatcaaaaatctggggagatgagggcgcgat	CRISPR spacer
gtcatcgaaatttgcggagatgagggcgcgtt	Protospacer
**  . .****.** *************** *

67. spacer 2.2|183906|32|NZ_CP007532|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 8, identity: 0.75

acggcaacggatgcgaccgccagcgcgatccc	CRISPR spacer
cgggccgaggatgcgaccgcgagcgcgagccg	Protospacer
  *** . ************ ******* **

68. spacer 2.2|183906|32|NZ_CP007532|CRISPRCasFinder,CRT,PILER-CR matches to NC_008826 (Methylibium petroleiphilum PM1 plasmid RPME01, complete sequence) position: , mismatch: 8, identity: 0.75

acggcaac-----ggatgcgaccgccagcgcgatccc	CRISPR spacer
-----aacttcctcgaagcgaccgccaccgcgatccc	Protospacer
     ***      ** ********** *********

69. spacer 1.3|166777|32|NZ_CP007532|CRISPRCasFinder,CRT,PILER-CR matches to MH538193 (Bacillus phage Saddex, complete genome) position: , mismatch: 9, identity: 0.719

ggttcagcagggtcgagagttgattcctcctg	CRISPR spacer
actggagctggttcgagagttgattcctcgat	Protospacer
. *  *** ** *****************

70. spacer 1.3|166777|32|NZ_CP007532|CRISPRCasFinder,CRT,PILER-CR matches to MG763894 (Bacillus phage HonestAbe, complete genome) position: , mismatch: 9, identity: 0.719

ggttcagcagggtcgagagttgattcctcctg	CRISPR spacer
actggagctggttcgagagttgattcctcgat	Protospacer
. *  *** ** *****************

71. spacer 1.3|166777|32|NZ_CP007532|CRISPRCasFinder,CRT,PILER-CR matches to NC_031116 (Bacillus phage Zuko, complete genome) position: , mismatch: 9, identity: 0.719

ggttcagcagggtcgagagttgattcctcctg	CRISPR spacer
actggagctggttcgagagttgattcctcgat	Protospacer
. *  *** ** *****************

72. spacer 1.4|166838|32|NZ_CP007532|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP011121 (Acetobacter oryzifermentans strain SLV-7 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

gggcttgggcgtctggaggttgtgggtatggc	CRISPR spacer
accctgttacgtctgtaggtagtgggtatggc	Protospacer
.  **   .****** **** ***********

73. spacer 1.4|166838|32|NZ_CP007532|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP006368 (Aureimonas sp. AU20 plasmid pAU20a, complete sequence) position: , mismatch: 9, identity: 0.719

gggcttgggcgtctggaggttgt-----gggtatggc	CRISPR spacer
gggattgggcgtctggagattgtccaacgaat-----	Protospacer
*** **************.****     *..*

74. spacer 1.4|166838|32|NZ_CP007532|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP023658 (Acetobacter pomorum strain BDGP5 plasmid pApBDGP5A, complete sequence) position: , mismatch: 9, identity: 0.719

gggcttgggcgtctggaggttgtgggtatggc	CRISPR spacer
accctgttacgtctgtaggtagtgggtatggc	Protospacer
.  **   .****** **** ***********

75. spacer 1.4|166838|32|NZ_CP007532|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP030872 (Acetobacter sp. JWB plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

gggcttgggcgtctggaggttgtgggtatggc	CRISPR spacer
accctgttacgtctgtaggtagtgggtatggc	Protospacer
.  **   .****** **** ***********

76. spacer 1.4|166838|32|NZ_CP007532|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021511 (Acetobacter pasteurianus subsp. pasteurianus strain SRCM101342 plasmid pAP1342-2, complete sequence) position: , mismatch: 9, identity: 0.719

gggcttgggcgtctggaggttgtgggtatggc	CRISPR spacer
accctgttacgtctgtaggtagtgggtatggc	Protospacer
.  **   .****** **** ***********

77. spacer 1.4|166838|32|NZ_CP007532|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP039847 (Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-2, complete sequence) position: , mismatch: 9, identity: 0.719

gggcttgggcgtctggaggttgtgggtatggc	CRISPR spacer
accctgttacgtctgtaggtagtgggtatggc	Protospacer
.  **   .****** **** ***********

78. spacer 1.5|166899|32|NZ_CP007532|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022220 (Bradyrhizobium guangxiense strain CCBAU 53363 plasmid p53363, complete sequence) position: , mismatch: 9, identity: 0.719

ggctcccatttcgcgagcgcgctagcgctggc	CRISPR spacer
gagaaggatttcgagagcgcgctggcgctggt	Protospacer
*.     ****** *********.*******.

79. spacer 1.5|166899|32|NZ_CP007532|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP030052 (Bradyrhizobium guangdongense strain CCBAU 51649 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

ggctcccatttcgcgagcgcgctagcgctggc	CRISPR spacer
gagaaggatttcgagagcgcgctggcgctggt	Protospacer
*.     ****** *********.*******.

80. spacer 1.5|166899|32|NZ_CP007532|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP030054 (Bradyrhizobium guangzhouense strain CCBAU 51670 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

ggctcccatttcgcgagcgcgctagcgctggc	CRISPR spacer
gagaaggatttcgagagcgcgctggcgctggt	Protospacer
*.     ****** *********.*******.

81. spacer 1.12|167320|32|NZ_CP007532|PILER-CR matches to AB853331 (Staphylococcus phage S25-4 DNA, complete genome) position: , mismatch: 9, identity: 0.719

taggttatttaacatatatataactatatatt-	CRISPR spacer
gtttttatttaacatatttataattat-tgtaa	Protospacer
    ************* *****.*** *.*

82. spacer 1.12|167320|32|NZ_CP007532|PILER-CR matches to NC_022920 (Staphylococcus phage S25-3 DNA, complete genome) position: , mismatch: 9, identity: 0.719

taggttatttaacatatatataactatatatt-	CRISPR spacer
gtttttatttaacatatttataattat-tgtaa	Protospacer
    ************* *****.*** *.*

83. spacer 1.15|167503|32|NZ_CP007532|PILER-CR matches to NZ_CP007515 (Rubrobacter radiotolerans strain RSPS-4 plasmid 1, complete sequence) position: , mismatch: 9, identity: 0.719

accgcccgcacgctgaccggacgcaagcgacg	CRISPR spacer
ttcgcccgcacgatgacctgacgcagctggct	Protospacer
 .********** ***** ******. .*.*

84. spacer 1.23|167306|32|NZ_CP007532|CRT,CRISPRCasFinder matches to AB853331 (Staphylococcus phage S25-4 DNA, complete genome) position: , mismatch: 9, identity: 0.719

taggttatttaacatatatataactatatatt-	CRISPR spacer
gtttttatttaacatatttataattat-tgtaa	Protospacer
    ************* *****.*** *.*

85. spacer 1.23|167306|32|NZ_CP007532|CRT,CRISPRCasFinder matches to NC_022920 (Staphylococcus phage S25-3 DNA, complete genome) position: , mismatch: 9, identity: 0.719

taggttatttaacatatatataactatatatt-	CRISPR spacer
gtttttatttaacatatttataattat-tgtaa	Protospacer
    ************* *****.*** *.*

86. spacer 1.26|167489|32|NZ_CP007532|CRT,CRISPRCasFinder matches to NZ_CP007515 (Rubrobacter radiotolerans strain RSPS-4 plasmid 1, complete sequence) position: , mismatch: 9, identity: 0.719

accgcccgcacgctgaccggacgcaagcgacg	CRISPR spacer
ttcgcccgcacgatgacctgacgcagctggct	Protospacer
 .********** ***** ******. .*.*

87. spacer 2.5|184089|32|NZ_CP007532|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LT900339 (Gluconobacter oxydans 621H isolate WT-DSMZ plasmid 2) position: , mismatch: 9, identity: 0.719

ctggtcctgttcgcactgataaacgccgtcgc	CRISPR spacer
agccccctgttcgcactcacaaacgccgtcct	Protospacer
    .************ *.********** .

88. spacer 2.5|184089|32|NZ_CP007532|CRISPRCasFinder,CRT,PILER-CR matches to NC_006672 (Gluconobacter oxydans 621H plasmid pGOX1, complete sequence) position: , mismatch: 9, identity: 0.719

ctggtcctgttcgcactgataaacgccgtcgc	CRISPR spacer
agccccctgttcgcactcacaaacgccgtcct	Protospacer
    .************ *.********** .

89. spacer 2.10|184394|32|NZ_CP007532|CRISPRCasFinder,CRT,PILER-CR matches to NC_009939 (Deinococcus geothermalis DSM 11300 plasmid pDGEO02, complete sequence) position: , mismatch: 9, identity: 0.719

agcggcgcagacactgttccagcccgcgacca	CRISPR spacer
cgcggcgcagagactcttccagccgggacgga	Protospacer
 ********** *** ******** * .   *

90. spacer 2.11|184455|32|NZ_CP007532|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020897 (Rhizobium phaseoli Brasil 5 strain Bra5 plasmid pRphaBra5a, complete sequence) position: , mismatch: 9, identity: 0.719

aaacaggccgcctgatccccgttaacggatct	CRISPR spacer
agatcgggcgcctgatccccgtttacgggctg	Protospacer
*.*. ** *************** ****...

91. spacer 2.11|184455|32|NZ_CP007532|CRISPRCasFinder,CRT,PILER-CR matches to NC_007764 (Rhizobium etli CFN 42 plasmid p42c, complete sequence) position: , mismatch: 9, identity: 0.719

aaacaggccgcctgatccccgttaacggatct	CRISPR spacer
agatcggccgcctgatcccggtttacgggctc	Protospacer
*.*. ************** *** ****....

92. spacer 2.11|184455|32|NZ_CP007532|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021026 (Rhizobium sp. TAL182 plasmid pRetTAL182b, complete sequence) position: , mismatch: 9, identity: 0.719

aaacaggccgcctgatccccgttaacggatct	CRISPR spacer
agatcgggcgcctgatccccgtttacgggctg	Protospacer
*.*. ** *************** ****...

93. spacer 2.11|184455|32|NZ_CP007532|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013631 (Rhizobium sp. N324 plasmid pRspN324a, complete sequence) position: , mismatch: 9, identity: 0.719

aaacaggccgcctgatccccgttaacggatct	CRISPR spacer
agatcggccgcctgatcccggtttacgggctg	Protospacer
*.*. ************** *** ****...

94. spacer 2.11|184455|32|NZ_CP007532|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013524 (Rhizobium phaseoli strain R744 plasmid pRphaR744b, complete sequence) position: , mismatch: 9, identity: 0.719

aaacaggccgcctgatccccgttaacggatct	CRISPR spacer
agatcggccgcctgatcccggtttacgggctc	Protospacer
*.*. ************** *** ****....

95. spacer 2.11|184455|32|NZ_CP007532|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020908 (Rhizobium etli strain NXC12 plasmid pRetNXC12b, complete sequence) position: , mismatch: 9, identity: 0.719

aaacaggccgcctgatccccgttaacggatct	CRISPR spacer
agatcggccgcctgatcccggtttacgggctc	Protospacer
*.*. ************** *** ****....

96. spacer 2.11|184455|32|NZ_CP007532|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013597 (Rhizobium sp. N741 plasmid pRspN741b, complete sequence) position: , mismatch: 9, identity: 0.719

aaacaggccgcctgatccccgttaacggatct	CRISPR spacer
agatcgggcgcctgatccccgtttacgggctg	Protospacer
*.*. ** *************** ****...

97. spacer 2.11|184455|32|NZ_CP007532|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013576 (Rhizobium phaseoli strain N671 plasmid pRphaN671b, complete sequence) position: , mismatch: 9, identity: 0.719

aaacaggccgcctgatccccgttaacggatct	CRISPR spacer
agatcggccgcctgatcccggtttacgggctc	Protospacer
*.*. ************** *** ****....

98. spacer 2.11|184455|32|NZ_CP007532|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013548 (Rhizobium phaseoli strain R611 plasmid pRetR611a, complete sequence) position: , mismatch: 9, identity: 0.719

aaacaggccgcctgatccccgttaacggatct	CRISPR spacer
agatcggccgcctgatcccggtttacgggctc	Protospacer
*.*. ************** *** ****....

99. spacer 2.11|184455|32|NZ_CP007532|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013528 (Rhizobium phaseoli strain R723 plasmid pRphaR723a, complete sequence) position: , mismatch: 9, identity: 0.719

aaacaggccgcctgatccccgttaacggatct	CRISPR spacer
agatcggccgcctgatcccggtttacgggctc	Protospacer
*.*. ************** *** ****....

100. spacer 2.11|184455|32|NZ_CP007532|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013533 (Rhizobium phaseoli strain R650 plasmid pRphaR650a, complete sequence) position: , mismatch: 9, identity: 0.719

aaacaggccgcctgatccccgttaacggatct	CRISPR spacer
agatcggccgcctgatcccggtttacgggctc	Protospacer
*.*. ************** *** ****....

101. spacer 2.11|184455|32|NZ_CP007532|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013543 (Rhizobium phaseoli strain R620 plasmid pRphaR620a, complete sequence) position: , mismatch: 9, identity: 0.719

aaacaggccgcctgatccccgttaacggatct	CRISPR spacer
agatcggccgcctgatcccggtttacgggctc	Protospacer
*.*. ************** *** ****....

102. spacer 2.11|184455|32|NZ_CP007532|CRISPRCasFinder,CRT,PILER-CR matches to NC_021907 (Rhizobium etli bv. mimosae str. Mim1 plasmid pRetMIM1b, complete sequence) position: , mismatch: 9, identity: 0.719

aaacaggccgcctgatccccgttaacggatct	CRISPR spacer
agatcggccgcctgatcccggtttacgggctc	Protospacer
*.*. ************** *** ****....

103. spacer 2.11|184455|32|NZ_CP007532|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013501 (Rhizobium esperanzae strain N561 plasmid pRspN561a, complete sequence) position: , mismatch: 9, identity: 0.719

aaacaggccgcctgatccccgttaacggatct	CRISPR spacer
agatcgggcgcctgatccccgtttacgggctg	Protospacer
*.*. ** *************** ****...

104. spacer 2.11|184455|32|NZ_CP007532|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013581 (Rhizobium phaseoli strain N261 plasmid pRphaN261a, complete sequence) position: , mismatch: 9, identity: 0.719

aaacaggccgcctgatccccgttaacggatct	CRISPR spacer
agatcggccgcctgatcccggtttacgggctc	Protospacer
*.*. ************** *** ****....

105. spacer 2.11|184455|32|NZ_CP007532|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013507 (Rhizobium sp. N1341 plasmid pRspN1341b, complete sequence) position: , mismatch: 9, identity: 0.719

aaacaggccgcctgatccccgttaacggatct	CRISPR spacer
agatcgggcgcctgatccccgtttacgggctg	Protospacer
*.*. ** *************** ****...

106. spacer 2.11|184455|32|NZ_CP007532|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013518 (Rhizobium sp. N113 plasmid pRspN113a, complete sequence) position: , mismatch: 9, identity: 0.719

aaacaggccgcctgatccccgttaacggatct	CRISPR spacer
agatcgggcgcctgatccccgtttacgggctg	Protospacer
*.*. ** *************** ****...

107. spacer 2.11|184455|32|NZ_CP007532|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013570 (Rhizobium phaseoli strain N771 plasmid pRphaN771b, complete sequence) position: , mismatch: 9, identity: 0.719

aaacaggccgcctgatccccgttaacggatct	CRISPR spacer
agatcggccgcctgatcccggtttacgggctc	Protospacer
*.*. ************** *** ****....

108. spacer 2.11|184455|32|NZ_CP007532|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013491 (Rhizobium sp. N6212 plasmid pRspN6212a, complete sequence) position: , mismatch: 9, identity: 0.719

aaacaggccgcctgatccccgttaacggatct	CRISPR spacer
agatcgggcgcctgatccccgtttacgggctg	Protospacer
*.*. ** *************** ****...

109. spacer 2.11|184455|32|NZ_CP007532|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013513 (Rhizobium sp. N1314 plasmid pRspN1314b, complete sequence) position: , mismatch: 9, identity: 0.719

aaacaggccgcctgatccccgttaacggatct	CRISPR spacer
agatcgggcgcctgatccccgtttacgggctg	Protospacer
*.*. ** *************** ****...

110. spacer 2.11|184455|32|NZ_CP007532|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013496 (Rhizobium sp. N621 plasmid pRspN621a, complete sequence) position: , mismatch: 9, identity: 0.719

aaacaggccgcctgatccccgttaacggatct	CRISPR spacer
agatcgggcgcctgatccccgtttacgggctg	Protospacer
*.*. ** *************** ****...

111. spacer 2.11|184455|32|NZ_CP007532|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013591 (Rhizobium sp. N871 plasmid pRspN871a, complete sequence) position: , mismatch: 9, identity: 0.719

aaacaggccgcctgatccccgttaacggatct	CRISPR spacer
agatcgggcgcctgatccccgtttacgggctg	Protospacer
*.*. ** *************** ****...

112. spacer 2.11|184455|32|NZ_CP007532|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013603 (Rhizobium sp. N731 plasmid pRspN731b, complete sequence) position: , mismatch: 9, identity: 0.719

aaacaggccgcctgatccccgttaacggatct	CRISPR spacer
agatcgggcgcctgatccccgtttacgggctg	Protospacer
*.*. ** *************** ****...

113. spacer 2.11|184455|32|NZ_CP007532|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP035002 (Rhizobium acidisoli strain FH23 plasmid pRapFH23d, complete sequence) position: , mismatch: 9, identity: 0.719

aaacaggccgcctgatccccgttaacggatct	CRISPR spacer
agatcggccgcctgatccctgtttacgggctg	Protospacer
*.*. **************.*** ****...

114. spacer 1.2|166716|32|NZ_CP007532|CRISPRCasFinder,CRT,PILER-CR matches to MH356729 (Pseudomonas phage LP14, complete genome) position: , mismatch: 10, identity: 0.688

ctcctcggtagttttcgctgtgcgcccgtaaa	CRISPR spacer
ggagacggtagttgtcgctctgcgcccgcgca	Protospacer
     ******** ***** ********.. *

115. spacer 1.7|167015|32|NZ_CP007532|PILER-CR matches to NZ_CP024793 (Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence) position: , mismatch: 10, identity: 0.688

ttctgcaattcttttagaatctgcattaatag	CRISPR spacer
gataacttttcttgtagaatctgctttaatat	Protospacer
  . .*  ***** ********** ******

116. spacer 1.8|167076|32|NZ_CP007532|PILER-CR matches to NZ_CP040096 (Pantoea sp. SO10 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

aaacaacgaatcgtgctggatttagagttttc	CRISPR spacer
ctgcccacaatcgtgctggatttggagtgttt	Protospacer
  .*    ***************.**** **.

117. spacer 1.12|167320|32|NZ_CP007532|PILER-CR matches to MN045228 (Staphylococcus phage Maine, complete genome) position: , mismatch: 10, identity: 0.688

taggttatttaacatatatataactatatatt	CRISPR spacer
aatagtaattaatatatatataactataatag	Protospacer
 * . ** ****.***************

118. spacer 1.18|167001|32|NZ_CP007532|CRT matches to NZ_CP024793 (Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence) position: , mismatch: 10, identity: 0.688

ttctgcaattcttttagaatctgcattaatag	CRISPR spacer
gataacttttcttgtagaatctgctttaatat	Protospacer
  . .*  ***** ********** ******

119. spacer 1.19|167062|32|NZ_CP007532|CRT,CRISPRCasFinder matches to NZ_CP040096 (Pantoea sp. SO10 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

aaacaacgaatcgtgctggatttagagttttc	CRISPR spacer
ctgcccacaatcgtgctggatttggagtgttt	Protospacer
  .*    ***************.**** **.

120. spacer 1.23|167306|32|NZ_CP007532|CRT,CRISPRCasFinder matches to MN045228 (Staphylococcus phage Maine, complete genome) position: , mismatch: 10, identity: 0.688

taggttatttaacatatatataactatatatt	CRISPR spacer
aatagtaattaatatatatataactataatag	Protospacer
 * . ** ****.***************

121. spacer 2.7|184211|32|NZ_CP007532|CRISPRCasFinder,CRT,PILER-CR matches to MT446416 (UNVERIFIED: Escherichia virus TH47, complete genome) position: , mismatch: 10, identity: 0.688

gacggactggaaaaactcatcatttctgaaga	CRISPR spacer
atgtcattggaaaaagtaatcatttctgaatt	Protospacer
.    *.******** * ************

122. spacer 2.8|184272|32|NZ_CP007532|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019203 (Salmonella enterica subsp. enterica serovar Infantis strain CFSAN003307 plasmid pCFSAN003307, complete sequence) position: , mismatch: 10, identity: 0.688

agttgcgcgatatgctcacgctgtttgtcagt	CRISPR spacer
ccctgcgcgatattcacacgctgttttatcgc	Protospacer
  .********** * **********  . *.

123. spacer 2.8|184272|32|NZ_CP007532|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LN868945 (Salmonella enterica subsp. enterica serovar Senftenberg strain NCTC10384 plasmid 3, complete sequence) position: , mismatch: 10, identity: 0.688

agttgcgcgatatgctcacgctgtttgtcagt	CRISPR spacer
ccctgcgcgatattcacacgctgttttatcgc	Protospacer
  .********** * **********  . *.

124. spacer 1.12|167320|32|NZ_CP007532|PILER-CR matches to NC_010371 (Finegoldia magna ATCC 29328 plasmid pFMC, complete sequence) position: , mismatch: 11, identity: 0.656

taggttatttaacatatatataactatatatt	CRISPR spacer
acacttagttaacatttatataactatcgtgc	Protospacer
  . *** ******* ***********    .

125. spacer 1.23|167306|32|NZ_CP007532|CRT,CRISPRCasFinder matches to NC_010371 (Finegoldia magna ATCC 29328 plasmid pFMC, complete sequence) position: , mismatch: 11, identity: 0.656

taggttatttaacatatatataactatatatt	CRISPR spacer
acacttagttaacatttatataactatcgtgc	Protospacer
  . *** ******* ***********    .

126. spacer 2.11|184455|32|NZ_CP007532|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012186 (Pseudonocardia sp. EC080619-01 plasmid pBCI1-1, complete sequence) position: , mismatch: 11, identity: 0.656

aaacaggccgcctgatccccgttaacggatct	CRISPR spacer
tcggtggcagcctgatcaccgttaacggtaac	Protospacer
  .  *** ******** **********   .

127. spacer 1.5|166899|32|NZ_CP007532|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP018666 (Sphingobium amiense strain DSM 16289 plasmid pSAMIE_3, complete sequence) position: , mismatch: 13, identity: 0.594

ggctcccatttcgcgagcgcgctagcgc--tggc----	CRISPR spacer
------ctgagcgctggcgcgctcgcgcaatggccacc	Protospacer
      *    *** .******* ****  ****

128. spacer 1.5|166899|32|NZ_CP007532|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP018821 (Sphingomonas koreensis strain ABOJV plasmid tig00000001, complete sequence) position: , mismatch: 13, identity: 0.594

ggctcccatttcgcgagcgcgctagcgc--tggc----	CRISPR spacer
------ctgagcgctggcgcgctcgcgcaatggccacc	Protospacer
      *    *** .******* ****  ****

129. spacer 1.12|167320|32|NZ_CP007532|PILER-CR matches to NZ_CP014152 (Clostridium botulinum strain BrDura plasmid pRSJ20_1, complete sequence) position: , mismatch: 16, identity: 0.5

taggttatttaacatatatataactatatatt--------------	CRISPR spacer
--------------tatatataattatatatattttaaggaggttg	Protospacer
              *********.*******

130. spacer 1.12|167320|32|NZ_CP007532|PILER-CR matches to NZ_CP006909 (Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence) position: , mismatch: 16, identity: 0.5

taggttatttaacatatatataactatatatt--------------	CRISPR spacer
--------------tatatataattatatatattttaaggaggttg	Protospacer
              *********.*******

131. spacer 1.12|167320|32|NZ_CP007532|PILER-CR matches to NZ_CP013684 (Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence) position: , mismatch: 16, identity: 0.5

taggttatttaacatatatataactatatatt--------------	CRISPR spacer
--------------tatatataattatatatattttaaggaggttg	Protospacer
              *********.*******

132. spacer 1.12|167320|32|NZ_CP007532|PILER-CR matches to NZ_CP013710 (Clostridium botulinum strain F634 plasmid pRSJ2_3, complete sequence) position: , mismatch: 16, identity: 0.5

taggttatttaacatatatataactatatatt--------------	CRISPR spacer
--------------tatatataattatatatattttaaggaggttg	Protospacer
              *********.*******

133. spacer 1.12|167320|32|NZ_CP007532|PILER-CR matches to NC_010418 (Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence) position: , mismatch: 16, identity: 0.5

taggttatttaacatatatataactatatatt--------------	CRISPR spacer
--------------tatatataattatatatattttaaggaggttg	Protospacer
              *********.*******

134. spacer 1.12|167320|32|NZ_CP007532|PILER-CR matches to NZ_CP013700 (Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence) position: , mismatch: 16, identity: 0.5

taggttatttaacatatatataactatatatt--------------	CRISPR spacer
--------------tatatataattatatatattttaaggaggttg	Protospacer
              *********.*******

135. spacer 1.12|167320|32|NZ_CP007532|PILER-CR matches to NC_025146 (Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111) position: , mismatch: 16, identity: 0.5

taggttatttaacatatatataactatatatt--------------	CRISPR spacer
--------------tatatataattatatatattttaaggaggttg	Protospacer
              *********.*******

136. spacer 1.12|167320|32|NZ_CP007532|PILER-CR matches to NC_012654 (Clostridium botulinum Ba4 str. 657 plasmid pCLJ, complete sequence) position: , mismatch: 16, identity: 0.5

taggttatttaacatatatataactatatatt--------------	CRISPR spacer
--------------tatatataattatatatattttaaggaggttg	Protospacer
              *********.*******

137. spacer 1.12|167320|32|NZ_CP007532|PILER-CR matches to NZ_CP031095 (Clostridium botulinum strain CFSAN034200 plasmid p1_CDC51232, complete sequence) position: , mismatch: 16, identity: 0.5

taggttatttaacatatatataactatatatt--------------	CRISPR spacer
--------------tatatataattatatatattttaaggaggttg	Protospacer
              *********.*******

138. spacer 1.23|167306|32|NZ_CP007532|CRT,CRISPRCasFinder matches to NZ_CP014152 (Clostridium botulinum strain BrDura plasmid pRSJ20_1, complete sequence) position: , mismatch: 16, identity: 0.5

taggttatttaacatatatataactatatatt--------------	CRISPR spacer
--------------tatatataattatatatattttaaggaggttg	Protospacer
              *********.*******

139. spacer 1.23|167306|32|NZ_CP007532|CRT,CRISPRCasFinder matches to NZ_CP006909 (Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence) position: , mismatch: 16, identity: 0.5

taggttatttaacatatatataactatatatt--------------	CRISPR spacer
--------------tatatataattatatatattttaaggaggttg	Protospacer
              *********.*******

140. spacer 1.23|167306|32|NZ_CP007532|CRT,CRISPRCasFinder matches to NZ_CP013684 (Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence) position: , mismatch: 16, identity: 0.5

taggttatttaacatatatataactatatatt--------------	CRISPR spacer
--------------tatatataattatatatattttaaggaggttg	Protospacer
              *********.*******

141. spacer 1.23|167306|32|NZ_CP007532|CRT,CRISPRCasFinder matches to NZ_CP013710 (Clostridium botulinum strain F634 plasmid pRSJ2_3, complete sequence) position: , mismatch: 16, identity: 0.5

taggttatttaacatatatataactatatatt--------------	CRISPR spacer
--------------tatatataattatatatattttaaggaggttg	Protospacer
              *********.*******

142. spacer 1.23|167306|32|NZ_CP007532|CRT,CRISPRCasFinder matches to NC_010418 (Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence) position: , mismatch: 16, identity: 0.5

taggttatttaacatatatataactatatatt--------------	CRISPR spacer
--------------tatatataattatatatattttaaggaggttg	Protospacer
              *********.*******

143. spacer 1.23|167306|32|NZ_CP007532|CRT,CRISPRCasFinder matches to NZ_CP013700 (Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence) position: , mismatch: 16, identity: 0.5

taggttatttaacatatatataactatatatt--------------	CRISPR spacer
--------------tatatataattatatatattttaaggaggttg	Protospacer
              *********.*******

144. spacer 1.23|167306|32|NZ_CP007532|CRT,CRISPRCasFinder matches to NC_025146 (Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111) position: , mismatch: 16, identity: 0.5

taggttatttaacatatatataactatatatt--------------	CRISPR spacer
--------------tatatataattatatatattttaaggaggttg	Protospacer
              *********.*******

145. spacer 1.23|167306|32|NZ_CP007532|CRT,CRISPRCasFinder matches to NC_012654 (Clostridium botulinum Ba4 str. 657 plasmid pCLJ, complete sequence) position: , mismatch: 16, identity: 0.5

taggttatttaacatatatataactatatatt--------------	CRISPR spacer
--------------tatatataattatatatattttaaggaggttg	Protospacer
              *********.*******

146. spacer 1.23|167306|32|NZ_CP007532|CRT,CRISPRCasFinder matches to NZ_CP031095 (Clostridium botulinum strain CFSAN034200 plasmid p1_CDC51232, complete sequence) position: , mismatch: 16, identity: 0.5

taggttatttaacatatatataactatatatt--------------	CRISPR spacer
--------------tatatataattatatatattttaaggaggttg	Protospacer
              *********.*******

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

2423932 : 2433272

Salmonella_phage(50.0%)

transposase,integrase

attL 2419302:2419316|attR 2434498:2434512

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2419302:2419316	attL	NA	NA	NA	NA
WP_001642934.1\|2423932_2425096_-\|integrase	site-specific integrase	B9UDL9	Salmonella_phage	7.4e-223	96.9
WP_157725488.1\|2425311_2425866_+	hypothetical protein	NA	NA	NA	NA
WP_023208134.1\|2426150_2426591_+\|transposase	IS200/IS605 family transposase	I4AZI8	Saccharomonospora_phage	4.8e-13	30.7
WP_023207758.1\|2426706_2428038_-	hypothetical protein	U5P0I5	Shigella_phage	1.7e-74	41.0
WP_001642935.1\|2428034_2428955_-	glycosyltransferase family 2 protein	I1TED8	Salmonella_phage	4.4e-162	92.4
WP_000915523.1\|2428951_2429314_-	GtrA family protein	I1TED9	Salmonella_phage	3.9e-61	100.0
WP_109043757.1\|2429736_2429946_-	copper-binding protein	NA	NA	NA	NA
WP_000339627.1\|2430876_2431731_-	AraC family transcriptional regulator	NA	NA	NA	NA
WP_023212918.1\|2431946_2433272_+	pyridine nucleotide-disulfide oxidoreductase	A0A2K5B2C5	Erysipelothrix_phage	1.0e-103	46.5
2434498:2434512	attR	NA	NA	NA	NA

DBSCAN-SWA_2

2830415 : 2880221

Salmonella_phage(85.71%)

plate,tRNA,capsid,tail,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000117870.1\|2830415_2831816_-\|tRNA	asparagine--tRNA ligase	A0A167RLM0	Powai_lake_megavirus	4.5e-81	35.1
WP_000191405.1\|2831984_2833187_-	nicotinate phosphoribosyltransferase	NA	NA	NA	NA
WP_023262989.1\|2833381_2834674_-	DUF3596 domain-containing protein	S4TSP2	Salmonella_phage	1.7e-252	99.8
WP_000065276.1\|2834718_2834967_-	excisionase family protein	S4TND0	Salmonella_phage	4.7e-42	100.0
WP_001237030.1\|2835007_2835247_-	DUF4060 family protein	H6WRW9	Salmonella_phage	9.7e-37	98.7
WP_077905217.1\|2835289_2836447_-	recombinase RecT	S4TTE8	Salmonella_phage	1.8e-216	99.5
WP_001525214.1\|2836409_2839325_-	PD-(D/E)XK nuclease-like domain-containing protein	H6WRX1	Salmonella_phage	0.0e+00	89.4
WP_023262988.1\|2839447_2839798_-	hypothetical protein	S4TSN6	Salmonella_phage	5.6e-49	77.6
WP_000551860.1\|2839819_2839990_-	DNA breaking-rejoining protein	H6WRX3	Salmonella_phage	1.3e-14	80.0
WP_077914912.1\|2839982_2840249_-	hypothetical protein	NA	NA	NA	NA
WP_024150574.1\|2840292_2840703_-	helix-turn-helix domain-containing protein	A0A1B5FPF4	Escherichia_phage	8.1e-07	42.4
WP_000370218.1\|2840822_2841062_+	helix-turn-helix domain-containing protein	H6WRX5	Salmonella_phage	3.2e-11	44.0
WP_077914913.1\|2841027_2841402_+	hypothetical protein	S4TTD7	Salmonella_phage	3.6e-62	97.6
WP_024150573.1\|2841492_2842470_+	replication protein	H6WRX7	Salmonella_phage	5.8e-160	98.4
WP_000800012.1\|2842472_2843222_+	ATP-binding protein	S4TNF5	Salmonella_phage	4.3e-139	100.0
WP_023262985.1\|2843232_2843436_+	DUF977 family protein	H6WRX9	Salmonella_phage	4.0e-31	100.0
WP_077914926.1\|2843445_2843580_+	DUF977 family protein	H6WRX9	Salmonella_phage	1.4e-16	95.5
WP_000065482.1\|2843576_2844110_+	ead/Ea22-like family protein	Q8HAA6	Salmonella_phage	3.8e-41	67.9
WP_000704096.1\|2844136_2845129_-	peptidase M85	NA	NA	NA	NA
WP_001217669.1\|2845398_2845632_+	DinI family protein	H6WRY5	Salmonella_phage	5.6e-37	100.0
WP_000807548.1\|2845743_2845965_+	hypothetical protein	NA	NA	NA	NA
WP_000929790.1\|2846047_2846650_+	DUF1367 family protein	S4TTI0	Salmonella_phage	7.5e-110	99.5
WP_000178134.1\|2846649_2846856_+	hypothetical protein	H6WRY8	Salmonella_phage	2.3e-34	98.5
WP_023262984.1\|2846858_2847470_+	recombination protein NinG	A0A0M4RU10	Salmonella_phage	1.8e-90	96.1
WP_000801753.1\|2847466_2847604_+	YlcG family protein	A0A0M5M7B2	Salmonella_phage	4.9e-09	81.6
WP_001047624.1\|2847603_2848413_+	antitermination protein	M9NZB0	Enterobacteria_phage	1.2e-110	69.5
WP_023262982.1\|2848715_2849213_-	hypothetical protein	A0A077K9U2	Edwardsiella_phage	3.1e-37	52.7
WP_023221874.1\|2849552_2849741_+	hypothetical protein	NA	NA	NA	NA
WP_001294873.1\|2849830_2850220_+\|holin	phage holin family protein	K7PHB9	Enterobacterial_phage	4.8e-41	72.5
WP_000226307.1\|2850206_2850488_+\|holin	phage holin family protein	K7PKN9	Enterobacterial_phage	2.6e-36	80.6
WP_023221873.1\|2850487_2851102_+	glycoside hydrolase family 19 protein	Q8HA86	Salmonella_phage	2.0e-94	82.4
WP_023221872.1\|2851098_2851641_+	DUF2514 family protein	NA	NA	NA	NA
WP_023262981.1\|2851743_2852247_+	hypothetical protein	NA	NA	NA	NA
WP_023221870.1\|2852307_2852937_+	hypothetical protein	A0A0M3ULJ9	Salmonella_phage	7.8e-110	99.0
WP_023262979.1\|2852939_2854562_+	hypothetical protein	A0A0M5M1R6	Salmonella_phage	0.0e+00	99.1
WP_023262978.1\|2854561_2856031_+	DUF1073 domain-containing protein	A0A0M4S6U1	Salmonella_phage	1.2e-281	99.6
WP_139134618.1\|2855915_2856653_+\|capsid	minor capsid protein	A0A0M4REK0	Salmonella_phage	6.0e-109	96.0
WP_000873159.1\|2856667_2857900_+	DUF2213 domain-containing protein	A0A0M4R5A6	Salmonella_phage	1.6e-228	99.5
WP_000128058.1\|2857904_2858402_+	hypothetical protein	A0A0M4QWZ6	Salmonella_phage	3.0e-88	100.0
WP_023221867.1\|2858413_2859355_+	DUF2184 domain-containing protein	A0A0M3ULD3	Salmonella_phage	7.0e-179	99.7
WP_023221866.1\|2859396_2859765_+	hypothetical protein	A0A0M4RTX5	Salmonella_phage	3.3e-60	99.2
WP_023262468.1\|2859730_2860138_+	DUF4054 domain-containing protein	A0A0M5M3S2	Salmonella_phage	4.2e-72	98.5
WP_023262467.1\|2860134_2860689_+	hypothetical protein	A0A0M4S631	Salmonella_phage	2.4e-94	98.9
WP_023221863.1\|2860675_2861065_+	hypothetical protein	A0A0M3ULK0	Salmonella_phage	7.8e-68	97.7
WP_000538608.1\|2861039_2861606_+	hypothetical protein	A0A0M4R331	Salmonella_phage	1.8e-105	99.5
WP_038393819.1\|2861608_2862760_+	DUF3383 family protein	A0A0M4RD26	Salmonella_phage	7.4e-215	99.7
WP_000501635.1\|2862770_2863211_+	DUF3277 family protein	A0A0M5M1K6	Salmonella_phage	9.4e-78	100.0
WP_023262851.1\|2863214_2863667_+	hypothetical protein	A0A0M4S6U8	Salmonella_phage	2.0e-78	99.3
WP_023262852.1\|2863844_2865854_+	transglycosylase SLT domain-containing protein	A0A0M4REK7	Salmonella_phage	0.0e+00	99.3
WP_000353826.1\|2865853_2866429_+	hypothetical protein	A0A0M3ULD5	Salmonella_phage	2.4e-97	100.0
WP_000155111.1\|2866428_2866731_+	hypothetical protein	A0A0M4R5B7	Salmonella_phage	4.2e-53	100.0
WP_023262853.1\|2866733_2867807_+	hypothetical protein	A0A0M4QX01	Salmonella_phage	4.7e-187	96.3
WP_023137771.1\|2867803_2868154_+	hypothetical protein	A0A0M4RTY3	Salmonella_phage	4.5e-22	66.7
WP_130525691.1\|2868157_2868898_+	hypothetical protein	NA	NA	NA	NA
WP_038393821.1\|2868962_2869718_+	translation initiation factor IF-2	A0A0M5M1K7	Salmonella_phage	8.5e-127	91.6
WP_001526515.1\|2869717_2870071_+	hypothetical protein	A0A0M4R339	Salmonella_phage	2.1e-59	96.6
WP_023262651.1\|2870071_2871271_+\|plate	baseplate J/gp47 family protein	A0A0M4RD32	Salmonella_phage	2.6e-215	97.7
WP_023262652.1\|2871267_2871948_+	DUF2612 domain-containing protein	A0A0M5M1K4	Salmonella_phage	1.7e-126	96.9
WP_023262653.1\|2871947_2873462_+	hypothetical protein	S4TP62	Salmonella_phage	2.5e-117	62.8
WP_023187585.1\|2873476_2873995_+\|tail	tail fiber assembly protein	A0A0U2QV64	Escherichia_phage	2.3e-46	52.6
WP_071786695.1\|2874243_2874429_+	hypothetical protein	NA	NA	NA	NA
WP_170914795.1\|2874461_2874953_+\|tail	tail fiber assembly protein	A0A0M4RTP2	Salmonella_phage	1.4e-66	89.2
WP_000776343.1\|2875080_2876283_-	multidrug effflux MFS transporter	S4TR35	Salmonella_phage	6.3e-209	100.0
WP_000497440.1\|2876975_2877182_-	DinI-like family protein	S4TNM0	Salmonella_phage	1.8e-31	100.0
WP_001643736.1\|2877608_2880221_+	aminopeptidase N	A0A0P0IY26	Acinetobacter_phage	1.8e-19	22.5

DBSCAN-SWA_3

3064041 : 3071568

Escherichia_phage(42.86%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_023208134.1\|3064041_3064482_+\|transposase	IS200/IS605 family transposase	I4AZI8	Saccharomonospora_phage	4.8e-13	30.7
WP_023262813.1\|3064989_3066114_+	type III secretion system effector SopF	NA	NA	NA	NA
WP_000275698.1\|3067164_3067578_+	subtilase cytotoxin subunit B	A0A0U2KD34	Escherichia_phage	5.5e-19	37.7
WP_023262812.1\|3067594_3068323_+	pertussis-like toxin subunit ArtA	A0A0U2KD26	Escherichia_phage	4.6e-61	52.0
WP_000158845.1\|3068506_3069049_+	glycoside hydrolase family 108 protein	A0A0U2S643	Escherichia_phage	6.2e-71	67.0
WP_001277616.1\|3069196_3069574_-	DUF1353 domain-containing protein	I1TQ41	Pseudomonas_phage	2.2e-14	38.4
WP_001529135.1\|3069646_3070456_-	cytolethal distending toxin S-CDT	A5LH53	Enterobacteria_phage	2.1e-62	50.0
WP_023208248.1\|3070953_3071118_+	hypothetical protein	NA	NA	NA	NA
WP_000497451.1\|3071328_3071568_-	virulence protein MsgA	K7P6H1	Enterobacteria_phage	8.5e-33	88.6

DBSCAN-SWA_4

3721861 : 3728478

Enterobacteria_phage(16.67%)

integrase

attL 3723131:3723145|attR 3734022:3734036

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_023262868.1\|3721861_3722353_-	DUF1441 family protein	Q9EYD0	Enterobacteria_phage	3.5e-41	55.6
WP_000789530.1\|3722660_3722828_+	lytic enzyme	NA	NA	NA	NA
WP_001529209.1\|3723084_3723618_-	DUF2514 domain-containing protein	A0A291LBG9	Klebsiella_phage	1.6e-10	42.4
3723131:3723145	attL	NA	NA	NA	NA
WP_001014089.1\|3723614_3723902_-	glycoside hydrolase family 19 protein	Q8HA86	Salmonella_phage	1.9e-39	95.1
WP_001643549.1\|3723932_3725039_+	PD-(D/E)XK nuclease-like domain-containing protein	Q9QF34	Lambdoid_phage	1.1e-55	66.7
WP_023262871.1\|3725035_3726115_+\|integrase	phage integrase Arm DNA-binding domain-containing protein	A0A2H4IYC8	uncultured_Caudovirales_phage	2.3e-101	52.9
WP_017441954.1\|3726489_3726843_-	YebY family protein	NA	NA	NA	NA
WP_000979695.1\|3726859_3727735_-	copper homeostasis membrane protein CopD	NA	NA	NA	NA
WP_000168393.1\|3727735_3728110_-	CopC domain-containing protein YobA	NA	NA	NA	NA
WP_000856224.1\|3728247_3728478_+	DNA polymerase III subunit theta	H9C187	Pectobacterium_phage	2.9e-14	60.3
3734022:3734036	attR	NA	NA	NA	NA

DBSCAN-SWA_5

3831125 : 3838373

Morganella_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001157315.1\|3831125_3832556_-	DNA cytosine methyltransferase	E5E3X6	Burkholderia_phage	1.0e-104	57.4
WP_023263105.1\|3832629_3833325_-	phosphohydrolase	A0A1D6Y7U0	Golden_Marseillevirus	2.1e-07	27.7
WP_023263104.1\|3833404_3833716_-	hypothetical protein	NA	NA	NA	NA
WP_001080681.1\|3834364_3835558_+	porin OmpS1	Q1MVN1	Enterobacteria_phage	1.3e-110	57.0
WP_024131109.1\|3835816_3836005_-	hypothetical protein	NA	NA	NA	NA
WP_000208508.1\|3836015_3836228_-	cold-shock protein	A0A1W6JNX5	Morganella_phage	1.1e-20	70.6
WP_038393879.1\|3836682_3837951_-	Y-family DNA polymerase	I6RSM4	Salmonella_phage	7.1e-227	91.9
WP_000394197.1\|3837953_3838373_-	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	8.5e-36	60.5

DBSCAN-SWA_6

3929133 : 3935439

Enterobacteria_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001645077.1\|3929133_3929673_-	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	2.9e-52	58.5
WP_001645078.1\|3929677_3930556_-	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	3.0e-107	64.1
WP_001023664.1\|3930603_3931503_-	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	1.4e-30	36.3
WP_023207414.1\|3931502_3932588_-	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	6.1e-102	53.9
WP_000981469.1\|3932964_3933858_-	GalU regulator GalF	A0A127AW70	Bacillus_phage	4.8e-44	42.2
WP_001645079.1\|3934035_3935439_-	colanic acid biosynthesis protein WcaM	A0A291LBB9	Klebsiella_phage	2.3e-21	26.5

DBSCAN-SWA_7

4002664 : 4011835

Enterobacteria_phage(66.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_023137006.1\|4002664_4004698_+\|tRNA	methionine--tRNA ligase	A0A1V0SDF2	Indivirus	1.0e-54	27.6
WP_000703136.1\|4004938_4005397_+	YehR family lipoprotein	Q9EYF5	Enterobacteria_phage	7.6e-54	73.2
WP_023137005.1\|4005568_4006099_+	YehR family lipoprotein	NA	NA	NA	NA
WP_000950413.1\|4006155_4006623_-	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	3.9e-74	90.3
WP_000598637.1\|4006669_4007389_-	two-component system response regulator BtsR	NA	NA	NA	NA
WP_000272850.1\|4007385_4009071_-	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	4.8e-279	91.3
WP_023262933.1\|4009293_4010025_+	HTH-type transcriptional regulator MlrA	Q9EYF2	Enterobacteria_phage	2.0e-101	88.4
WP_001261696.1\|4010084_4010192_+	protein YohO	NA	NA	NA	NA
WP_000824854.1\|4010172_4010904_-	ABC transporter permease	NA	NA	NA	NA
WP_023262932.1\|4010887_4011835_-	ABC transporter ATP-binding protein	F2Y1V5	Organic_Lake_phycodnavirus	3.7e-10	27.8

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP007532

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection