CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NC_022531	Bacillus velezensis NAU-B3 plasmid pBamNAU-B3a, complete sequence	0 crisprs	NA	0	0	0	0
NC_022530	Bacillus velezensis NAU-B3, complete genome	1 crisprs	csa3,DinG,cas3,RT,WYL,DEDDh,casR	0	0	10	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NC_022530_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_022530_1

708178-708245

Orphan

Consensus_repeat	Method
GGCTACCCGGGGTACGGTTTTGGCGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_022530_1

>merge|NC_022530|1|708178-708245|CRISPRCasFinder
GGCTACCCGGGGTACGGTTTTGGCGGCCACGGAGGCTTCGGAGGATATCCGGGATACGGTTTCGGCGG

>NC_022530|1|1|708178-708245|CRISPRCasFinder
GGCTACCCGGGGTACGGTTTTGGCGG	CCACGGAGGCTTCGGA
GGATATCCGGGATACGGTTTCGGCGG

Protein	Signature genes	Signature genes Name	Protein_function
NC_022530.1\|WP_022552725.1\|710773_711307_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|235142
NC_022530.1\|WP_022552722.1\|705036_706920_-\|ribonuclease-YeeF-family-protein	unknown	unknown	gnl\|CDD\|227731
NC_022530.1\|WP_079891363.1\|701302_701431_-\|CbrC-family-protein	unknown	unknown	gnl\|CDD\|367610
NC_022530.1\|WP_014417142.1\|713385_714252_+\|STAS-domain-containing-protein	unknown	unknown	gnl\|CDD\|132912
NC_022530.1\|WP_022552715.1\|699603_700677_+\|HigA-family-addiction-module-antidote-protein	unknown	unknown	gnl\|CDD\|274228
NC_022530.1\|WP_038461258.1\|699273_699588_+\|plasmid-maintenance-system-killer-protein	unknown	unknown	gnl\|CDD\|226079
NC_022530.1\|WP_022552726.1\|711337_711616_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372929
NC_022530.1\|WP_003155700.1\|710115_710685_+\|spore-coat-protein-CotJC	unknown	unknown	gnl\|CDD\|252986
NC_022530.1\|WP_022552724.1\|708602_709472_+\|aminoglycoside-6-adenylyltransferase	unknown	unknown	gnl\|CDD\|377357
NC_022530.1\|WP_007408934.1\|709837_710101_+\|spore-coat-protein-CotJB	unknown	unknown	gnl\|CDD\|378904
NC_022530.1\|WP_022552716.1\|701442_701925_-\|antitoxin-YezG-family-protein	unknown	unknown	gnl\|CDD\|377394
NC_022530.1\|WP_022552721.1\|703799_704195_-\|immunity-22-family-protein	unknown	unknown	gnl\|CDD\|379476
NC_022530.1\|WP_003155709.1\|707218_707938_+\|YebC/PmpR-family-DNA-binding-transcriptional-regulator	unknown	unknown	gnl\|CDD\|237084
NC_022530.1\|WP_038461754.1\|701944_702400_-\|TIGR01741-family-protein	unknown	unknown	gnl\|CDD\|130802
NC_022530.1\|WP_003155704.1\|709605_709854_+\|spore-coat-associated-protein-CotJA	unknown	unknown	gnl\|CDD\|378536
NC_022530.1\|WP_007408938.1\|712862_713225_-\|VOC-family-protein	unknown	unknown	gnl\|CDD\|319924
NC_022530.1\|WP_003155696.1\|712451_712778_-\|heme-degrading-oxygenase-HmoA	unknown	unknown	gnl\|CDD\|225209
NC_022530.1\|WP_022552718.1\|702491_702962_-\|antitoxin-YezG-family-protein	unknown	unknown	gnl\|CDD\|377394
NC_022530.1\|WP_015417243.1\|704729_705020_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376019
NC_022530.1\|WP_017419063.1\|711729_712419_+\|DUF421-domain-containing-protein	unknown	unknown	gnl\|CDD\|225205

Protein	Function_ID	Function_description	E-value
NC_022530.1\|WP_022552725.1\|710773_711307_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|235142	PRK03624, PRK03624, putative acetyltransferase; Provisional.	1.14429e-05
NC_022530.1\|WP_022552722.1\|705036_706920_-\|ribonuclease-YeeF-family-protein	gnl\|CDD\|227731	COG5444, COG5444, Uncharacterized conserved protein [Function unknown].	2.6239e-82
NC_022530.1\|WP_079891363.1\|701302_701431_-\|CbrC-family-protein	gnl\|CDD\|367610	pfam03691, UPF0167, Uncharacterized protein family (UPF0167). The proteins in this family are about 200 amino acids long and each contain 3 CXXC motifs.	5.98715e-10
NC_022530.1\|WP_014417142.1\|713385_714252_+\|STAS-domain-containing-protein	gnl\|CDD\|132912	cd07041, STAS_RsbR_RsbS_like, Sulphate Transporter and Anti-Sigma factor antagonist domain of the "stressosome" complex proteins RsbS and RsbR, regulators of the bacterial stress activated alternative sigma factor sigma-B by phosphorylation. The STAS (Sulphate Transporter and Anti-Sigma factor antagonist) domain of proteins related to RsbS and RsbR which are part of the "stressosome" complex that plays an important role in the regulation of the bacterial stress activated alternative sigma factor sigma-B. During stress conditions RsbS and RsbR are phosphorylated which leads to the release of RsbT, an activator of of the RsbU phosphatase, which in turn activates RsbV which leads to the release and activation of sigma factor B. RsbS is a single domain protein (STAS domain), while RsbR-like proteins have a well-conserved C-terminal STATS domain and a variable N-terminal domain. The STAS domain is also found in the C- terminal region of sulphate transporters and anti-anti-sigma factors.	6.84253e-36
NC_022530.1\|WP_022552715.1\|699603_700677_+\|HigA-family-addiction-module-antidote-protein	gnl\|CDD\|274228	TIGR02607, Virulence-associated_protein_I, addiction module antidote protein, HigA family. Members of this family form a distinct clade within the larger family HTH_3 of helix-turn-helix proteins, described by pfam01381. Members of this clade are strictly bacterial and nearly always shorter than 110 amino acids. This family includes the characterized member HigA, without which the killer protein HigB cannot be cloned. The hig (host inhibition of growth) system is noted to be unusual in that killer protein is uncoded by the upstream member of the gene pair. [Regulatory functions, DNA interactions, Regulatory functions, Protein interactions, Mobile and extrachromosomal element functions, Other].	6.88993e-13
NC_022530.1\|WP_038461258.1\|699273_699588_+\|plasmid-maintenance-system-killer-protein	gnl\|CDD\|226079	COG3549, HigB, Plasmid maintenance system killer protein [General function prediction only].	0.00184777
NC_022530.1\|WP_022552726.1\|711337_711616_+\|hypothetical-protein	gnl\|CDD\|372929	pfam14150, YesK, YesK-like protein. The YesK-like protein family includes the B. subtilis YesK protein, which is functionally uncharacterized. Its expression is regulated by the sporulation-specific sigma factor sigma-E. This family of proteins is found in bacteria. Proteins in this family are approximately 100 amino acids in length.	5.3629e-11
NC_022530.1\|WP_003155700.1\|710115_710685_+\|spore-coat-protein-CotJC	gnl\|CDD\|252986	pfam05067, Mn_catalase, Manganese containing catalase. Catalases are important antioxidant metalloenzymes that catalyze disproportionation of hydrogen peroxide, forming dioxygen and water. Two families of catalases are known, one having a heme cofactor, and this family that is a structurally distinct family containing non-heme manganese.	9.22523e-95
NC_022530.1\|WP_022552724.1\|708602_709472_+\|aminoglycoside-6-adenylyltransferase	gnl\|CDD\|377357	pfam04439, Adenyl_transf, Streptomycin adenylyltransferase. Also known as Aminoglycoside 6- adenylyltransferase (EC:2.7.7.-), this protein confers resistance to aminoglycoside antibiotics.	6.41428e-147
NC_022530.1\|WP_007408934.1\|709837_710101_+\|spore-coat-protein-CotJB	gnl\|CDD\|378904	pfam12652, CotJB, CotJB protein. CotJ is a sigma E-controlled operon involved in the spore coat of Bacillus subtilis. This protein has been identified as a spore coat protein.	2.72958e-30
NC_022530.1\|WP_022552716.1\|701442_701925_-\|antitoxin-YezG-family-protein	gnl\|CDD\|377394	pfam04634, DUF600, Protein of unknown function, DUF600. This conserved region is found in several uncharacterized proteins from Gram positive bacteria.	3.52443e-54
NC_022530.1\|WP_022552721.1\|703799_704195_-\|immunity-22-family-protein	gnl\|CDD\|379476	pfam14112, DUF4284, Immunity protein 22. A predicted immunity protein with an alpha+beta fold and conserved tryptophan,tyrosine and an acidic residues. Proteins containing this domain are present in bacterial polymorphic toxin systems as an immediate gene neighbor of the toxin gene, which usually contains toxin domains of the ColD/E5, Tox-REase-4, Ntox49 or Ntox14 families. The domain is also found in heterogeneous polyimmunity loci.	2.36379e-17
NC_022530.1\|WP_003155709.1\|707218_707938_+\|YebC/PmpR-family-DNA-binding-transcriptional-regulator	gnl\|CDD\|237084	PRK12378, PRK12378, YebC/PmpR family DNA-binding transcriptional regulator.	5.42044e-137
NC_022530.1\|WP_038461754.1\|701944_702400_-\|TIGR01741-family-protein	gnl\|CDD\|130802	TIGR01741, staph_tand_hypo, conserved hypothetical protein. This model represents a tandem array of 10 proteins in Staphylococcus aureus and the C-terminal region of one protein each in Bacillus subtilis and Bacillus halodurans.	1.93774e-64
NC_022530.1\|WP_003155704.1\|709605_709854_+\|spore-coat-associated-protein-CotJA	gnl\|CDD\|378536	pfam11007, CotJA, Spore coat associated protein JA (CotJA). CotJA is part of the CotJ operon which contains CotJA and CotJC. The operon encodes spore coat proteins. Interaction of CotJA with CotJC is required for the assembly of both CotJA and CotJC into the spore coat.	6.06894e-07
NC_022530.1\|WP_007408938.1\|712862_713225_-\|VOC-family-protein	gnl\|CDD\|319924	cd07263, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family. The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC domain is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.	1.20004e-35
NC_022530.1\|WP_003155696.1\|712451_712778_-\|heme-degrading-oxygenase-HmoA	gnl\|CDD\|225209	COG2329, COG2329, Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides [General function prediction only].	1.45762e-20
NC_022530.1\|WP_022552718.1\|702491_702962_-\|antitoxin-YezG-family-protein	gnl\|CDD\|377394	pfam04634, DUF600, Protein of unknown function, DUF600. This conserved region is found in several uncharacterized proteins from Gram positive bacteria.	3.49359e-56
NC_022530.1\|WP_015417243.1\|704729_705020_-\|hypothetical-protein	gnl\|CDD\|376019	pfam18593, CdiI_2, CdiI immunity protein. Contact-dependent growth inhibition (CDI) is an important mechanism of inter-bacterial competition found in many Gram-negative pathogens. CDI+ cells express cell-surface CdiA proteins that bind neighboring bacteria and deliver C-terminal toxin domains (CdiA-CT) to inhibit target-cell growth. CDI+ bacteria also produce CdiI immunity proteins, which specifically neutralize cognate CdiA-CT toxins to prevent self-inhibition. Structure analysis of CdiI immunity protein from Yersinia kristensenii shows that it is composed of eight alpha-helices packed together to form a nearly spherical structure with weak structural homology to a putative TetR family transcriptional repressor. The CdiI protein fits into the curved cavity of the CdiA-CTYkris toxin domain where it most likely neutralizes toxin activity by blocking access to RNA substrates. This domain is mostly found in gammaproteobacteria.	1.0199e-10
NC_022530.1\|WP_017419063.1\|711729_712419_+\|DUF421-domain-containing-protein	gnl\|CDD\|225205	COG2323, COG2323, Predicted membrane protein [Function unknown].	3.31508e-65

>NC_022530.1|WP_003155709.1|707218_707938_+|YebC/PmpR-family-DNA-binding-transcriptional-regulator
MGRKWNNIKEKKASKDANTSRIYAKFGREIYVAAKQGEPDPESNQALKVVLERAKTYSVPKNIIERAIEKAKGGAEENFDELRYEGFGPNGSMIIVDALTNNVNRTAPEVRAAFGKNGGNMGVSGSVAYMFDATAVIGVEGKTADEALELLMEADVDVRDILEEDDSVIVYAEPDQFHAVQEAFKNAGVEEFTVAELTMLAQNEVELPEDAKAQFEKLIDVLEDLEDVQQVYHNVDLGE
>NC_022530.1|WP_022552722.1|705036_706920_-|ribonuclease-YeeF-family-protein
MKLFEANSLLAAAKQRAGEYKKLRGQMVNLKKAFQGMADLGDGDFSGRGADNIKAFFQDHAGVTDSWLDLIDMKIAFLTSLPGKVEDAGLSNSHVEESFLEHELTHALSKSKAIMEEQKKDMRSILGEIEDIISLDLFSTESTDQKLSSADKKRIETIHKLGKLDHDLTKEYAETEANEQFIQADFQQLQNATGKGKSATPLHYNAKAYRESDIHKKKGDIARHSDAYLTIKKEEAKEREIKDLKKKLADGVTDPDEYLEIAKKIGYENLEPAQVQYVMQLEQAKQLEEVGETAWDIVKGIGVGLYDVGKDTITGVKDLAVGAWDFYHLSDEQKVAKTISGVLNTPSYAKIIWTNLADSWNDKMVNGDAYSRSHYITYAIGSIVGLKGSGSAVKVSSKLAKTGAAKVDNVLEAGEKAAVKHVKTGIEKGKDYINSVSKNKYEPALAGMAQNIENTHNVKNTPLLKSIIEDQKESVLSKSVTSDNSGIHSVKQGDSSPLAPGGGLAAHEAKGGHLIERHVGKTDKELIKRLRTDPNPHITASSTFNDRATAERIATSVLNDPKNTKKIENWIDDPKKPKLMLRYKGDGEIIGRSVSRNSELVENVTNAKIILKKDNNGNFILTGYPTK
>NC_022530.1|WP_015417243.1|704729_705020_-|hypothetical-protein
MDERYDFLDELENFLGATFHQDIQSPEHALDEFIEEISKEGLLFTVKYCEEFLNSDLTKEEKEDIIKCNAEIYFPTIGLPPIEWLKSVIEQLKEAI
>NC_022530.1|WP_022552721.1|703799_704195_-|immunity-22-family-protein
MERQNYVSLWIGSIKDNESLSKYVELVYNEDEGDFLPSQFLIDFDIDIDDLDEDFIEKVAHENSRNNLPALIDGCSYDSVILPRFEDMVGTTLPDQINAAVLLYNFEYDGREKEINAKNYSFKFIGAVSYV
>NC_022530.1|WP_022552718.1|702491_702962_-|antitoxin-YezG-family-protein
METEKMGIIYQKIAEQINEIIPSEWEKVALYAEILDDSSEVYFFFTTPQNQEYIYSHDIPEHFNVDEDIYDELLYELHDYLEELRDEFKTNNEDLWTNLTLHLERSGKFSIDYDYTDVIASDLNGTQRQVVWEYKNLGILPEDEDDKQFVISYFGL
>NC_022530.1|WP_038461754.1|701944_702400_-|TIGR01741-family-protein
MQDLYQIIGEKLNDIIPCEWTKIYLYAEVLDDSTMVLFHFKTPEKCQLIYSQDIPVRYSVSKDIFKTLLREIRELFEELRAEHKNNNDQVWTNLTLTLESNGPFQLDYNDDDILASELDGYQRIALWEYKTLGILPEDEEDQEFLISYLNL
>NC_022530.1|WP_022552716.1|701442_701925_-|antitoxin-YezG-family-protein
METEKMGELYQQIAEGINEIIPSEWEKVILYAEILDDSSEVFFYFNPPQSEDYIYSHNIPEHFHVSEDIYDELLLQLHDSFEELRDEFKENNQDIWTNLTLQLEINGKLSIEYDYEDVLQSQYTISQRKAIWVYEHLGTYPKRESVRTFLEQYIQSKSEY
>NC_022530.1|WP_079891363.1|701302_701431_-|CbrC-family-protein
MSLPTFQYNPNPVALNVISKEVATCPVCKQESEYVYEGHFLF
>NC_022530.1|WP_022552715.1|699603_700677_+|HigA-family-addiction-module-antidote-protein
MGNEFIVHTGSVIKEYLEEIGMSPNDCAKRLGVRENDLSNLLSGKSRLTEEMALNLEKIFKGIPASYWLNYDRKYQEYQDNEVIHSKTYKAEDLNKLSKRFRFNTVFNGLDWSLTKQASEMLKLLKIDNFEQFDTVYSKLNVDFMEDGGETEAIAIWLNLAREEVEIQNKDLSDKEFSKEKLIESLGKFKSLSLNNDYESSLKSARKLLNRLGVYLVFINAIENSKVRGALTTYKEKPAIFLSGRFKTHDHVWFALIHEIGHLIKHYIPNEPIVTLENELEDLKPNTDKKEEEANEFARDFFIDKSEYKKFVESRRFDEQSIYEFANAQSILPGIVLARLQHDGYVSFDKLNHLKQR
>NC_022530.1|WP_038461258.1|699273_699588_+|plasmid-maintenance-system-killer-protein
MKISFATRKLEKILTNERLIKKEYTLFYKKVINRISEIRVANNLDEIPHVPPPRRHKLDGDYNDCWGIDISKNFRIVLRPIGDWDESELKSINEIEILSIGDYH
>NC_022530.1|WP_022552724.1|708602_709472_+|aminoglycoside-6-adenylyltransferase
MRSEDEMMKLILDIAMKDERIRLVTLEGSRTNKNVPRDKFQDYDISYFVTDMDSFTSDESWLDQFGERLMMQKPEDMELFPPELGDWFSYLMLFKDHHKIDLTLIPLSQTEDYFTQSDGLAEIVLDKDDRINSKIIASDEQYHIKKPTPREFDDCCNEFWMVSTYVIKGLMRKEILFALDHMNDILRPNVLRMIAWNIGIEHQFSLSVGKNYKYIQHYMNAKDWEILLNTYVGNTYESVWKALFDCQGLFRAYSKSVAVLLRYEYPEYDQQITEYTLKHYQRFQSDFSL
>NC_022530.1|WP_003155704.1|709605_709854_+|spore-coat-associated-protein-CotJA
MKENQPFTPVKSYKPFHSRFDPCPPIGRKYYRTPPHLYMRFQPYHLEQFSPMEALRKGTLWKDLYDFYDNPYRGGIEYGEKD
>NC_022530.1|WP_007408934.1|709837_710101_+|spore-coat-protein-CotJB
MAKKIDDEYYRLLEQIQAADFVLVELTLYLDTHPHDRLALQQFHEYSRYSRQLRKRFEPEYGPLLQFGVSQVGAQWDWGRGPWPWQV
>NC_022530.1|WP_003155700.1|710115_710685_+|spore-coat-protein-CotJC
MWVYEKKLQYPVKVSTCNPMLAKFLIEQYGGADGELAAALRYLNQRYTIPDKVIGLLTDIGTEEFAHLEMIATMIYKLTKDATPEQLRDAGLSDHYVNHDSALFYHNAAGVPFTASYIQAKGDPIADLYEDIAAEEKARATYQWIIDISDDPDLNDSLRFLREREIVHSMRFREAVEILKEERDKKKIF
>NC_022530.1|WP_022552725.1|710773_711307_+|GNAT-family-N-acetyltransferase
MTPFTITEEKAGAFRVTPARKDDEEEVMDLLVQAAEWLRDKGSNQWSGLLQGEDTHNMREAIAKGYVFLFRQNEELAGVVMLLPEASGWDRRLWGDEGHEESVYLHRLAINRRFAGERLGRTIMTWAETGVSCPGKTKIRLDCVSENKALQSFYSGMGYESKGLAPGYHLFEKKMSK
>NC_022530.1|WP_022552726.1|711337_711616_+|hypothetical-protein
MGFFYLICLAAFCLNFAVSAVLRKKWPKKMWPECLLAVLGLTALSTVVYSIFGVGGWEGMGLGLAAMFAGSGAAAGYAAEVCLRVVRSNQKQ
>NC_022530.1|WP_017419063.1|711729_712419_+|DUF421-domain-containing-protein
MGHLLTVAWELVCGLGILFVILKLLGKTQFSQITPFDFISALILGELVGNAVYDKNVRIIEIIFASLLWGVLIYLIELITQKVKSTRKLLEGEPSIIIHKGKLKYDVLKKNKLDINQLQSLLRQANCFSIQEAEYAILETNGMVSVLPKFQYDTTKNGDMQIKPKQVSLPVTLIIDGEVLYENLKEAGLEEKQLNQELKKLNIKKTEDVLYAEWKPDKPLFVLPYEEKK
>NC_022530.1|WP_003155696.1|712451_712778_-|heme-degrading-oxygenase-HmoA
MFVQIRKMTVKEGHADKVIERFSSEGVIEKQEGLIDVTVLEKKVRRGDEEVVVLIRWESEDHWKQWEKSEDHIAAHKANQGKPKPDYMLGTDVGMYHVRAVKTGVHEK
>NC_022530.1|WP_007408938.1|712862_713225_-|VOC-family-protein
MIKKIATVAVYTDDQQKAKTFWTEKAGFETVAEHPMGPGAFWLEVAPKGAATHLVIYPKSMMKGAEHMKASIVFECEDVFAAYEQMKKNGITFLDEPKQMEWGSFVQFKDEDGHVFLLKS
>NC_022530.1|WP_014417142.1|713385_714252_+|STAS-domain-containing-protein
MNKDQLLHDYIITHSAELTEKWLKLRRKLRGRFYSADQLSEEMKRLLIEQHTFTNTVIASAFLEDPAVFQHNKEKWAAQVAKSRVEQDAEVHEVVEAIGNSRTVFWEAVTRFMDEHQDIVTNEDARRWNHLVNSSFDQLMTDFTEQFQTLMIARLSSQQELISELSCPVILIADTIGTLPLIGSIDTRRARVILETVPENCVAKRITNLVIDLSGVPIVDTMVAQQLYMLSKTLFLLGIRTVFSGIRPDVAQTSIQLGLDFSEYQTYGSLEQALASMGVTCVIEEAKA

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

660051 : 669942

Synechococcus_phage(50.0%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_022552701.1\|660051_661344_+	adenylosuccinate lyase	A0A2H4UUU6	Bodo_saltans_virus	4.5e-19	27.3
WP_014417101.1\|661419_662139_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A0E3G7P8	Synechococcus_phage	1.7e-47	44.3
WP_014417102.1\|662138_662393_+	phosphoribosylformylglycinamidine synthase subunit PurS	M4QPE7	Synechococcus_phage	4.7e-05	33.3
WP_014417103.1\|662389_663073_+	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA
WP_022552702.1\|663056_665285_+	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	1.0e-156	40.5
WP_014417105.1\|665260_666691_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	6.2e-54	32.7
WP_014417106.1\|666782_667823_+	phosphoribosylformylglycinamidine cyclo-ligase	A0A0E3F760	Synechococcus_phage	1.8e-63	41.1
WP_007408902.1\|667819_668407_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	1.3e-26	38.8
WP_014417107.1\|668403_669942_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	Q58MG4	Prochlorococcus_phage	3.3e-77	50.5

DBSCAN-SWA_2

1108172 : 1149655

Bacillus_virus(20.0%)

protease,tRNA,coat

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_007408149.1\|1108172_1109435_+\|protease	ATP-dependent protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	4.2e-147	65.3
WP_014418557.1\|1109584_1111243_+\|protease	ATP-dependent protease LonB	A0A167RA83	Powai_lake_megavirus	1.9e-14	32.7
WP_007612896.1\|1111441_1113766_+	endopeptidase La	A0A0R6PGP8	Moraxella_phage	1.4e-183	44.2
WP_003152626.1\|1113762_1114350_+	YihA family ribosome biogenesis GTP-binding protein	NA	NA	NA	NA
WP_022552872.1\|1114382_1114874_-	hypothetical protein	NA	NA	NA	NA
WP_003152628.1\|1115067_1116435_+\|tRNA	glutamyl-tRNA reductase	NA	NA	NA	NA
WP_007408154.1\|1116442_1117273_+	cytochrome c biogenesis protein CcsA	NA	NA	NA	NA
WP_012118114.1\|1117307_1118249_+	hydroxymethylbilane synthase	NA	NA	NA	NA
WP_022552873.1\|1118238_1119018_+	uroporphyrinogen-III synthase	NA	NA	NA	NA
WP_096145017.1\|1119023_1119998_+	porphobilinogen synthase	NA	NA	NA	NA
WP_022552875.1\|1120026_1121316_+	glutamate-1-semialdehyde 2,1-aminomutase	NA	NA	NA	NA
WP_022552876.1\|1121448_1123329_+	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA
WP_014418551.1\|1123362_1124385_+\|coat	spore coat protein YsxE	NA	NA	NA	NA
WP_003152639.1\|1124398_1124590_-	hypothetical protein	NA	NA	NA	NA
WP_022552877.1\|1125042_1127685_+\|tRNA	valine--tRNA ligase	A0A1V0S951	Catovirus	3.7e-161	42.3
WP_022552878.1\|1127743_1129036_+	bifunctional folylpolyglutamate synthase/dihydrofolate synthase	NA	NA	NA	NA
WP_022552879.1\|1129176_1129929_+	prepilin peptidase	NA	NA	NA	NA
WP_022552880.1\|1130055_1131057_+	SPOR domain-containing protein	NA	NA	NA	NA
WP_012118105.1\|1131197_1131767_+	septum formation inhibitor Maf	NA	NA	NA	NA
WP_007408165.1\|1131798_1132494_+	DNA repair protein RadC	NA	NA	NA	NA
WP_003152647.1\|1132585_1133599_+	rod shape-determining protein MreB	NA	NA	NA	NA
WP_007408166.1\|1133629_1134493_+	rod shape-determining protein MreC	NA	NA	NA	NA
WP_003152650.1\|1134489_1135008_+	rod shape-determining protein MreD	NA	NA	NA	NA
WP_003152653.1\|1135061_1135742_+	septum site-determining protein MinC	NA	NA	NA	NA
WP_003152655.1\|1135744_1136548_+	septum site-determining protein MinD	NA	NA	NA	NA
WP_017418246.1\|1136675_1137479_+	M23 family metallopeptidase	NA	NA	NA	NA
WP_017418245.1\|1137471_1138338_+\|protease	site-2 protease family protein	NA	NA	NA	NA
WP_003152660.1\|1138483_1138792_+	50S ribosomal protein L21	NA	NA	NA	NA
WP_012118103.1\|1138794_1139136_+\|protease	ribosomal-processing cysteine protease Prp	NA	NA	NA	NA
WP_003152662.1\|1139148_1139433_+	50S ribosomal protein L27	NA	NA	NA	NA
WP_014418543.1\|1139750_1140329_+	Spo0B domain-containing protein	NA	NA	NA	NA
WP_007408172.1\|1140360_1141647_+	GTPase ObgE	NA	NA	NA	NA
WP_007408173.1\|1141700_1142144_+	transcriptional regulator ThrR	NA	NA	NA	NA
WP_003152668.1\|1142157_1143015_+	prephenate dehydratase	NA	NA	NA	NA
WP_014418541.1\|1143040_1143583_-	transcription repressor NadR	NA	NA	NA	NA
WP_022552881.1\|1143579_1144731_-	IscS subfamily cysteine desulfurase	A0A141ZJV0	Faustovirus	3.9e-30	29.9
WP_022552882.1\|1144837_1146403_+	L-aspartate oxidase	NA	NA	NA	NA
WP_038461554.1\|1146384_1147233_+	carboxylating nicotinate-nucleotide diphosphorylase	NA	NA	NA	NA
WP_014418538.1\|1147234_1148338_+	quinolinate synthase NadA	NA	NA	NA	NA
WP_014418537.1\|1148464_1149655_+\|coat	SafA/ExsA family spore coat assembly protein	NA	NA	NA	NA

DBSCAN-SWA_3

1538585 : 1544838

Staphylococcus_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_022553020.1\|1538585_1539701_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A2H4PQS8	Staphylococcus_phage	1.3e-54	36.3
WP_021494255.1\|1539681_1540329_+	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	2.6e-39	44.3
WP_014418281.1\|1540343_1541540_+	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	A0A2H4PQS2	Staphylococcus_phage	2.1e-116	54.7
WP_003153372.1\|1541572_1542037_+	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	1.2e-43	59.3
WP_003153373.1\|1542153_1542528_+	GNAT family N-acetyltransferase RibT	NA	NA	NA	NA
WP_021494254.1\|1542593_1543115_-	DUF309 domain-containing protein	NA	NA	NA	NA
WP_003153376.1\|1543202_1543292_-	YjcZ family sporulation protein	NA	NA	NA	NA
WP_007409427.1\|1543499_1544255_+	segregation/condensation protein A	A0A1B1IVW1	uncultured_Mediterranean_phage	2.9e-10	25.7
WP_007409428.1\|1544244_1544838_+	SMC-Scp complex subunit ScpB	A0A1B1IVT7	uncultured_Mediterranean_phage	2.6e-14	36.6

DBSCAN-SWA_4

1646681 : 1665196

Bacillus_phage(100.0%)

holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_022553055.1\|1646681_1647662_-	thermonuclease family protein	A0A1P8CWK6	Bacillus_phage	1.6e-80	78.1
WP_022553056.1\|1647834_1649550_+	ribonuclease YeeF family protein	O64023	Bacillus_phage	3.5e-253	76.5
WP_014417844.1\|1649558_1650047_+	SMI1/KNR4 family protein	O64024	Bacillus_phage	5.2e-85	89.4
WP_041482512.1\|1650036_1650525_+	antitoxin YezG family protein	NA	NA	NA	NA
WP_079890946.1\|1650626_1651100_+	SMI1/KNR4 family protein	A0A1P8CWM6	Bacillus_phage	8.6e-61	66.5
WP_076982784.1\|1651396_1651486_-\|holin	putative holin-like toxin	NA	NA	NA	NA
WP_021493638.1\|1651729_1651933_+	hypothetical protein	NA	NA	NA	NA
WP_021493637.1\|1652061_1652835_+	sporulation protein YunB	NA	NA	NA	NA
WP_022553058.1\|1653063_1653396_+	YolD-like family protein	A0A1P8CWP2	Bacillus_phage	3.7e-42	75.5
WP_022553059.1\|1653388_1654639_+	DNA polymerase V	O64031	Bacillus_phage	4.0e-222	91.3
WP_014417849.1\|1654802_1655963_-	tetratricopeptide repeat protein	A0A1P8CWN8	Bacillus_phage	8.4e-33	26.0
WP_041482578.1\|1656114_1656375_-	hypothetical protein	NA	NA	NA	NA
WP_014470077.1\|1656732_1656984_-\|holin	phage holin	A0A1P8CWN5	Bacillus_phage	6.9e-33	85.5
WP_014417852.1\|1657004_1657397_-	hypothetical protein	A0A1P8CWP1	Bacillus_phage	7.1e-61	97.7
WP_022553061.1\|1657511_1658555_-	N-acetylmuramoyl-L-alanine amidase family protein	A0A1J0MS59	Bacillus_phage	6.1e-83	52.7
WP_022553062.1\|1658727_1661277_-	Pre-neck appendage protein	D6R401	Bacillus_phage	5.9e-148	38.8
WP_022553063.1\|1661290_1662106_-	hypothetical protein	A0A1P8CWP7	Bacillus_phage	1.6e-94	62.8
WP_162147387.1\|1662165_1662333_-	hypothetical protein	NA	NA	NA	NA
WP_022553064.1\|1662562_1665196_-	hypothetical protein	A0A1P8CWQ0	Bacillus_phage	0.0e+00	70.8

DBSCAN-SWA_5

1675449 : 1691165

Bacillus_phage(70.59%)

integrase

attL 1672135:1672149|attR 1681819:1681833

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1672135:1672149	attL	NA	NA	NA	NA
WP_041482515.1\|1675449_1676076_-	hypothetical protein	A0A0H3UZD5	Geobacillus_virus	6.1e-22	30.8
WP_041482516.1\|1676434_1676914_-	hypothetical protein	NA	NA	NA	NA
WP_041482517.1\|1676929_1677403_-	hypothetical protein	NA	NA	NA	NA
WP_014472041.1\|1677791_1678793_-\|integrase	site-specific integrase	A0A1P8CWP6	Bacillus_phage	2.2e-170	86.7
WP_022553069.1\|1678806_1679223_-	hypothetical protein	A0A1P8CWQ4	Bacillus_phage	3.6e-47	66.9
WP_022553070.1\|1679222_1679708_-	hypothetical protein	A0A1P8CWQ6	Bacillus_phage	2.0e-57	71.0
WP_076982967.1\|1679790_1679985_-	XkdX family protein	A0A1P8CWR4	Bacillus_phage	2.6e-11	63.0
WP_022553072.1\|1680319_1681654_-	hypothetical protein	A0A1P8CWR7	Bacillus_phage	9.3e-28	34.8
WP_022553073.1\|1681653_1682010_-	hypothetical protein	O64055	Bacillus_phage	8.2e-48	79.7
1681819:1681833	attR	NA	NA	NA	NA
WP_041482518.1\|1682081_1682549_-	hypothetical protein	NA	NA	NA	NA
WP_022553074.1\|1682564_1683368_-	hypothetical protein	A0A1P8CWR0	Bacillus_phage	1.3e-69	56.6
WP_022553075.1\|1683408_1684119_-	hypothetical protein	A0A1P8CWQ7	Bacillus_phage	6.0e-90	64.7
WP_022553076.1\|1684115_1684622_-	hypothetical protein	O64060	Bacillus_phage	1.8e-64	69.0
WP_014417870.1\|1684618_1685284_-	hypothetical protein	A0A1P8CWR8	Bacillus_phage	5.3e-48	53.6
WP_041482519.1\|1685280_1685601_-	hypothetical protein	U5J9I5	Bacillus_phage	9.7e-16	37.9
WP_041481804.1\|1685597_1685906_-	hypothetical protein	A0A0H3UZ42	Geobacillus_virus	4.3e-13	42.9
WP_022553077.1\|1686041_1686575_-	hypothetical protein	A0A0K2FLE1	Brevibacillus_phage	3.9e-25	40.8
WP_014417872.1\|1686627_1687620_-	hypothetical protein	E0YJ30	Lactococcus_phage	2.0e-35	31.6
WP_022553078.1\|1687644_1688187_-	hypothetical protein	NA	NA	NA	NA
WP_051363655.1\|1688211_1689648_-	hypothetical protein	A0A0K2FMA5	Brevibacillus_phage	2.1e-62	33.1
WP_022553080.1\|1689722_1691165_-	hypothetical protein	U5J9V5	Bacillus_phage	3.5e-89	39.5

DBSCAN-SWA_6

1716596 : 1782439

106

Bacillus_phage(88.16%)

integrase

attL 1725071:1725089|attR 1734766:1734784

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_022553100.1\|1716596_1717688_-	acyltransferase	A9YX16	Burkholderia_phage	1.3e-11	25.6
WP_041482529.1\|1717993_1718431_+	hypothetical protein	NA	NA	NA	NA
WP_041482530.1\|1718524_1718737_+	helix-turn-helix transcriptional regulator	A0A1P8CWU2	Bacillus_phage	4.2e-23	75.4
WP_041482531.1\|1718784_1719012_+	helix-turn-helix transcriptional regulator	O64085	Bacillus_phage	4.8e-09	40.8
WP_157870120.1\|1719090_1719240_+	hypothetical protein	NA	NA	NA	NA
WP_022553104.1\|1719569_1720136_+	hypothetical protein	NA	NA	NA	NA
WP_022553105.1\|1720170_1720398_+	hypothetical protein	NA	NA	NA	NA
WP_041482533.1\|1720727_1720952_+	hypothetical protein	NA	NA	NA	NA
WP_014417903.1\|1720966_1721149_-	hypothetical protein	A0A1P8CWV7	Bacillus_phage	1.7e-25	87.9
WP_041482534.1\|1721478_1721694_+	hypothetical protein	O64089	Bacillus_phage	9.7e-12	49.3
WP_021493564.1\|1721705_1721837_+	hypothetical protein	A0A1P8CWV9	Bacillus_phage	1.0e-16	86.0
WP_022553107.1\|1721885_1722431_+	hypothetical protein	NA	NA	NA	NA
WP_021493562.1\|1722436_1722769_+	hypothetical protein	A0A1P8CWV8	Bacillus_phage	3.1e-25	52.9
WP_022553109.1\|1722851_1723262_+	type II toxin-antitoxin system HicB family antitoxin	A0A1L2JY34	Aeribacillus_phage	3.1e-38	58.1
WP_022553110.1\|1723423_1724563_+	hypothetical protein	NA	NA	NA	NA
WP_021493559.1\|1724592_1724724_+	lysogeny pheromone AimP family peptide	NA	NA	NA	NA
WP_021493558.1\|1724851_1725007_+	hypothetical protein	A0A1P8CWW2	Bacillus_phage	1.5e-09	58.8
1725071:1725089	attL	NA	NA	NA	NA
WP_014472000.1\|1725156_1725369_+	hypothetical protein	A0A1P8CWW7	Bacillus_phage	1.6e-22	78.5
WP_014471999.1\|1725383_1725614_+	hypothetical protein	A0A1P8CWW1	Bacillus_phage	5.5e-21	72.3
WP_021493556.1\|1725652_1725817_+	hypothetical protein	A0A1P8CWX2	Bacillus_phage	5.1e-05	52.6
WP_022553111.1\|1725826_1726885_+\|integrase	tyrosine-type recombinase/integrase	A0A1P8CWW9	Bacillus_phage	9.7e-153	75.1
WP_022553112.1\|1726961_1728311_+	hypothetical protein	A0A1P8CWX1	Bacillus_phage	5.7e-190	75.4
WP_022553113.1\|1728330_1729314_+\|integrase	integrase	A0A1P8CWX4	Bacillus_phage	2.5e-139	78.0
WP_041482535.1\|1729534_1729756_-	helix-turn-helix transcriptional regulator	A0A1P8CWW6	Bacillus_phage	1.9e-26	78.1
WP_022553114.1\|1729921_1730221_+	hypothetical protein	A0A1P8CWX3	Bacillus_phage	6.1e-20	51.0
WP_020954128.1\|1730295_1730541_+	hypothetical protein	A0A1P8CWW5	Bacillus_phage	5.7e-16	52.0
WP_041482536.1\|1730649_1730874_+	hypothetical protein	A0A1P8CWW8	Bacillus_phage	1.0e-16	53.2
WP_022553115.1\|1730906_1731323_+	hypothetical protein	A0A191ZDH8	Pseudoalteromonas_virus	7.2e-11	38.9
WP_022553116.1\|1731327_1731702_+	hypothetical protein	R4JKA5	Bacillus_phage	6.7e-16	39.2
WP_022553117.1\|1731973_1732252_+	hypothetical protein	A0A1P8CWX5	Bacillus_phage	1.1e-44	95.7
WP_041482538.1\|1732612_1732795_+	hypothetical protein	NA	NA	NA	NA
WP_041482539.1\|1732871_1733171_+	hypothetical protein	A0A0S2SXU1	Bacillus_phage	3.5e-07	34.1
WP_022553119.1\|1733569_1733872_+	hypothetical protein	NA	NA	NA	NA
WP_041482540.1\|1733981_1734179_+	hypothetical protein	NA	NA	NA	NA
WP_022553120.1\|1734219_1734612_+	hypothetical protein	A0A0A8WEI8	Clostridium_phage	4.5e-23	43.8
WP_104679106.1\|1734782_1735013_+	hypothetical protein	O64123	Bacillus_phage	3.2e-29	93.0
1734766:1734784	attR	NA	NA	NA	NA
WP_022553121.1\|1735029_1735404_-	membrane protein	A0A1P8CWZ2	Bacillus_phage	1.1e-39	64.5
WP_173391191.1\|1736009_1736162_-	hypothetical protein	A0A1P8CWZ1	Bacillus_phage	1.9e-14	74.0
WP_022553122.1\|1736304_1737141_+	hypothetical protein	A0A1P8CWY7	Bacillus_phage	3.0e-88	65.1
WP_022553123.1\|1737198_1738011_-	hypothetical protein	O64130	Bacillus_phage	5.2e-138	86.3
WP_022553124.1\|1738080_1738755_-	SOS response-associated peptidase	A0A1P8CX02	Bacillus_phage	3.0e-75	94.4
WP_022553125.1\|1738826_1739045_+	hypothetical protein	O64132	Bacillus_phage	8.9e-29	88.4
WP_041482542.1\|1739050_1739371_+	hypothetical protein	NA	NA	NA	NA
WP_014721243.1\|1739404_1739551_+	hypothetical protein	A0A1P8CWZ9	Bacillus_phage	1.7e-12	100.0
WP_014417923.1\|1739556_1740027_+	hypothetical protein	D9J0I1	Brochothrix_phage	8.7e-13	35.5
WP_022553126.1\|1740316_1741141_+	poly-gamma-glutamate hydrolase family protein	O64134	Bacillus_phage	1.6e-86	61.0
WP_022553127.1\|1741137_1742886_+	right-handed parallel beta-helix repeat-containing protein	O64135	Bacillus_phage	2.5e-214	63.1
WP_022553128.1\|1742924_1743302_+	hypothetical protein	A0A1P8CX06	Bacillus_phage	1.3e-51	77.0
WP_041482543.1\|1743914_1744289_+	hypothetical protein	A0A1P8CX10	Bacillus_phage	1.1e-53	79.8
WP_022553129.1\|1744316_1745231_+	hypothetical protein	A0A1P8CX09	Bacillus_phage	3.1e-155	90.1
WP_022553130.1\|1745319_1746291_+	ATP-binding protein	A0A1P8CX29	Bacillus_phage	2.1e-114	60.1
WP_022553131.1\|1746333_1746804_+	hypothetical protein	A0A1P8CX08	Bacillus_phage	1.3e-80	89.1
WP_022553132.1\|1746818_1748333_+	DnaB family protein	A0A1P8CWZ7	Bacillus_phage	9.2e-274	94.8
WP_022553133.1\|1748348_1749485_+	hypothetical protein	A0A1P8CX05	Bacillus_phage	3.6e-206	89.9
WP_022553134.1\|1749484_1751215_+	single-stranded-DNA-specific exonuclease RecJ	A0A1P8CX07	Bacillus_phage	1.6e-306	90.3
WP_022553135.1\|1751227_1755157_+	DNA polymerase III subunit alpha	A0A1P8CX14	Bacillus_phage	0.0e+00	81.8
WP_022553136.1\|1755178_1755886_+	hypothetical protein	A0A1P8CX16	Bacillus_phage	6.7e-25	35.8
WP_022553137.1\|1755897_1756101_+	YorP family protein	O64150	Bacillus_phage	1.6e-27	82.1
WP_022553138.1\|1756105_1756264_+	hypothetical protein	A0A1P8CX36	Bacillus_phage	2.5e-12	64.7
WP_022553139.1\|1756260_1756758_+	AAA family ATPase	A0A1P8CX28	Bacillus_phage	1.9e-66	74.8
WP_022553140.1\|1756797_1757559_+	site-specific DNA-methyltransferase	W8EBG5	Geobacillus_phage	2.5e-78	58.2
WP_051363656.1\|1757654_1758383_+	site-specific DNA-methyltransferase	A0A0E3IAX4	Synechococcus_phage	1.4e-70	55.0
WP_014417940.1\|1758433_1758652_+	hypothetical protein	O64155	Bacillus_phage	1.9e-15	61.4
WP_041482544.1\|1758931_1759129_+	hypothetical protein	NA	NA	NA	NA
WP_022553142.1\|1759316_1760075_+	hypothetical protein	NA	NA	NA	NA
WP_021493495.1\|1760610_1760841_+	hypothetical protein	NA	NA	NA	NA
WP_021493494.1\|1760841_1761039_+	hypothetical protein	A0A1U9WQN5	Geobacillus_phage	1.4e-12	53.4
WP_021493493.1\|1761111_1761450_+	hypothetical protein	S5MS56	Bacillus_phage	9.9e-19	46.8
WP_041482546.1\|1761512_1761692_+	hypothetical protein	NA	NA	NA	NA
WP_022553143.1\|1761724_1762153_+	hypothetical protein	A0A1P8CX27	Bacillus_phage	1.0e-36	63.7
WP_022553144.1\|1762153_1762594_+	hypothetical protein	NA	NA	NA	NA
WP_041482547.1\|1762586_1762784_+	hypothetical protein	NA	NA	NA	NA
WP_014470225.1\|1762828_1763122_+	hypothetical protein	NA	NA	NA	NA
WP_147785930.1\|1763227_1763446_+	hypothetical protein	NA	NA	NA	NA
WP_082179794.1\|1763411_1763708_+	DUF1653 domain-containing protein	A0A1P8CX21	Bacillus_phage	2.1e-28	82.6
WP_014721253.1\|1763720_1763855_+	hypothetical protein	O64168	Bacillus_phage	8.1e-17	93.2
WP_022553147.1\|1763875_1764070_+	hypothetical protein	O64169	Bacillus_phage	6.5e-31	98.4
WP_041482548.1\|1764111_1764390_+	hypothetical protein	NA	NA	NA	NA
WP_041482549.1\|1764403_1764586_+	hypothetical protein	F8WPL1	Bacillus_phage	6.7e-22	76.7
WP_154019767.1\|1764642_1764792_+	hypothetical protein	NA	NA	NA	NA
WP_022553148.1\|1764810_1765161_+	hypothetical protein	O64171	Bacillus_phage	3.1e-23	48.3
WP_041482550.1\|1765157_1765553_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	A0A1P8CX56	Bacillus_phage	4.8e-57	84.0
WP_022553149.1\|1765515_1767615_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	A0A1P8CX40	Bacillus_phage	0.0e+00	61.5
WP_041482551.1\|1768537_1769059_+	HNH endonuclease	A0A1P8CX39	Bacillus_phage	2.0e-79	85.0
WP_022553152.1\|1769639_1769888_+	thiol reductase thioredoxin	A0A1P8CX24	Bacillus_phage	5.0e-28	75.0
WP_022553153.1\|1769887_1770394_+	hypothetical protein	A0A109ZVT6	Bacillus_phage	6.7e-11	31.9
WP_022553154.1\|1770442_1770805_+	hypothetical protein	A0A172JI43	Bacillus_phage	4.6e-14	41.3
WP_022553155.1\|1770878_1771307_+	dUTP diphosphatase	A0A1P8CX51	Bacillus_phage	8.9e-73	90.8
WP_022553156.1\|1771407_1771842_-	hypothetical protein	NA	NA	NA	NA
WP_041482552.1\|1772182_1772491_+	hypothetical protein	NA	NA	NA	NA
WP_022553158.1\|1772483_1772783_+	hypothetical protein	O64180	Bacillus_phage	5.7e-18	53.5
WP_022553159.1\|1773254_1774094_+	thymidylate synthase	A0A1P8CX42	Bacillus_phage	9.4e-151	90.3
WP_022553160.1\|1774093_1774600_+	dihydrofolate reductase	A0A0H3UYW4	Geobacillus_virus	2.8e-33	40.4
WP_022553161.1\|1774728_1775094_+	hypothetical protein	NA	NA	NA	NA
WP_022553162.1\|1775153_1775510_+	hypothetical protein	NA	NA	NA	NA
WP_022553164.1\|1776772_1777147_+	hypothetical protein	A0A217ERC6	Bacillus_phage	1.4e-05	35.9
WP_022553165.1\|1777179_1777458_+	hypothetical protein	NA	NA	NA	NA
WP_031303942.1\|1777589_1778534_+	HNH endonuclease	A0A1B1P765	Bacillus_phage	2.0e-16	41.8
WP_021493461.1\|1778535_1779363_+	metallophosphoesterase	O64184	Bacillus_phage	1.3e-157	92.7
WP_041481809.1\|1779429_1779765_+	hypothetical protein	F8WPK8	Bacillus_phage	5.5e-38	64.2
WP_022553166.1\|1779806_1780046_+	hypothetical protein	NA	NA	NA	NA
WP_029974572.1\|1780211_1780457_+	hypothetical protein	NA	NA	NA	NA
WP_029974573.1\|1780718_1780889_+	hypothetical protein	O64190	Bacillus_phage	2.8e-06	54.4
WP_022553167.1\|1780885_1781317_+	hypothetical protein	NA	NA	NA	NA
WP_041482556.1\|1781547_1781787_-	helix-turn-helix transcriptional regulator	A0A1P8CX60	Bacillus_phage	2.9e-25	68.9
WP_022553169.1\|1781884_1782439_+	hypothetical protein	O64195	Bacillus_phage	3.7e-87	88.2

DBSCAN-SWA_7

1839032 : 1846202

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_022553199.1\|1839032_1839257_+	helix-turn-helix transcriptional regulator	A0A1P8CWU2	Bacillus_phage	3.4e-23	80.3
WP_021493945.1\|1839864_1840224_+	hypothetical protein	O64028	Bacillus_phage	7.5e-33	61.4
WP_022553201.1\|1840284_1841301_-	hypothetical protein	NA	NA	NA	NA
WP_029974280.1\|1841844_1841967_-	PhrK family phosphatase-inhibitory pheromone	NA	NA	NA	NA
WP_022553203.1\|1841963_1843079_-	tetratricopeptide repeat protein	D6R410	Bacillus_phage	3.1e-93	48.1
WP_021493940.1\|1843446_1843899_+	hypothetical protein	O64117	Bacillus_phage	6.3e-61	76.7
WP_021493939.1\|1844145_1844520_-	hypothetical protein	A0A1P8CWZ2	Bacillus_phage	8.1e-30	52.8
WP_038461826.1\|1845310_1845664_+	DUF3221 domain-containing protein	NA	NA	NA	NA
WP_022553207.1\|1846025_1846202_+	hypothetical protein	O64196	Bacillus_phage	6.5e-22	93.1

DBSCAN-SWA_8

2140497 : 2146711

Bacillus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_015417523.1\|2140497_2141466_-	stage V sporulation protein K	G3MAX6	Bacillus_virus	8.0e-53	40.9
WP_022553310.1\|2141772_2142531_+	N-acetylmuramoyl-L-alanine amidase	E5DV68	Deep-sea_thermophilic_phage	2.4e-52	50.0
WP_014417835.1\|2142580_2143201_-	hypothetical protein	A0A127AYS1	Bacillus_phage	5.4e-47	48.4
WP_012117608.1\|2143249_2144239_-	class 1b ribonucleoside-diphosphate reductase subunit beta	F8WQ21	Bacillus_phage	1.1e-155	83.0
WP_007611605.1\|2144256_2146359_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	U5PY35	Bacillus_phage	0.0e+00	85.7
WP_014417834.1\|2146318_2146711_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	G3MBF1	Bacillus_virus	5.0e-30	59.1

DBSCAN-SWA_9

2704882 : 2736754

Bacillus_phage(33.33%)

tail,capsid,portal,holin,plate,terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_007407257.1\|2704882_2705761_-	N-acetylmuramoyl-L-alanine amidase	Q9ZXD7	Bacillus_phage	3.7e-81	60.5
WP_003154813.1\|2705774_2706038_-\|holin	phage holin	A0A2H4J6M0	uncultured_Caudovirales_phage	2.3e-23	65.5
WP_022553473.1\|2706051_2706315_-	hemolysin XhlA family protein	A0A2H4JD40	uncultured_Caudovirales_phage	1.5e-22	61.9
WP_022553474.1\|2706366_2707128_-	hypothetical protein	NA	NA	NA	NA
WP_007610833.1\|2707184_2707382_-	XkdX family protein	A0A2H4JAA1	uncultured_Caudovirales_phage	7.3e-14	61.8
WP_022553475.1\|2707386_2707758_-	hypothetical protein	NA	NA	NA	NA
WP_022553476.1\|2707770_2709393_-	hypothetical protein	A0A1P8CWR7	Bacillus_phage	8.1e-42	39.7
WP_003154822.1\|2709395_2709668_-	hypothetical protein	NA	NA	NA	NA
WP_022553477.1\|2709664_2710243_-	YmfQ family protein	A0A2H4J717	uncultured_Caudovirales_phage	4.1e-12	31.0
WP_022553478.1\|2710226_2711273_-\|plate	baseplate J/gp47 family protein	S6AVU3	Thermus_phage	1.0e-69	44.1
WP_003154825.1\|2711265_2711691_-	DUF2634 domain-containing protein	A0A2H4J6K5	uncultured_Caudovirales_phage	1.5e-11	35.9
WP_022553480.1\|2711794_2712061_-	DUF2577 family protein	S6C459	Thermus_phage	3.4e-06	37.5
WP_022553481.1\|2712060_2713038_-	hypothetical protein	A0A1L6BY20	Clostridium_phage	3.7e-34	30.6
WP_022553482.1\|2713051_2713711_-	LysM peptidoglycan-binding domain-containing protein	G3MBQ1	Bacillus_virus	1.8e-08	45.3
WP_022553483.1\|2713703_2718830_-	transglycosylase SLT domain-containing protein	A0A1L2JY60	Aeribacillus_phage	2.0e-41	44.9
WP_015239684.1\|2718817_2718970_-	hypothetical protein	NA	NA	NA	NA
WP_003154836.1\|2719011_2719458_-\|portal	phage portal protein	A0A0A7RTY8	Clostridium_phage	1.0e-10	35.8
WP_003154837.1\|2719531_2719975_-\|tail	phage tail tube protein	A0A0K2CNG3	Brevibacillus_phage	8.4e-26	45.2
WP_007610810.1\|2719976_2721374_-\|tail	phage tail sheath subtilisin-like domain-containing protein	A0A0A7RTT5	Clostridium_phage	9.0e-82	40.4
WP_022553484.1\|2721373_2721583_-	hypothetical protein	NA	NA	NA	NA
WP_022553485.1\|2721579_2722026_-	hypothetical protein	NA	NA	NA	NA
WP_022553486.1\|2722022_2722526_-	HK97 gp10 family phage protein	NA	NA	NA	NA
WP_022553487.1\|2722522_2722879_-	DUF3599 family protein	NA	NA	NA	NA
WP_021494026.1\|2722875_2723259_-	DUF3199 family protein	NA	NA	NA	NA
WP_022553488.1\|2723275_2724211_-\|capsid	phage major capsid protein	A0A1B1P7E3	Bacillus_phage	1.9e-104	62.8
WP_003154849.1\|2724237_2725083_-\|portal	phage portal protein	A0A1B1P7E4	Bacillus_phage	2.5e-55	58.1
WP_089072483.1\|2725102_2726494_-\|portal	phage portal protein	A0A1B1P7C8	Bacillus_phage	1.4e-138	55.8
WP_022553490.1\|2726542_2727841_-\|terminase	PBSX family phage terminase large subunit	M4ZRM5	Bacillus_phage	2.7e-149	58.9
WP_022553491.1\|2727837_2728635_-\|terminase	terminase small subunit	A0A0S2MVB6	Bacillus_phage	2.3e-58	49.4
WP_012117362.1\|2728747_2729260_-	sigma-70 family RNA polymerase sigma factor	A0A0K2CNQ1	Brevibacillus_phage	2.9e-22	44.6
WP_003154859.1\|2729366_2729570_-	hypothetical protein	A0A2H4J4M6	uncultured_Caudovirales_phage	5.4e-12	48.5
WP_014417522.1\|2729559_2729901_-	hypothetical protein	NA	NA	NA	NA
WP_014417521.1\|2729989_2730166_-	hypothetical protein	NA	NA	NA	NA
WP_022553492.1\|2730165_2730966_-	ATP-binding protein	A6XMI1	Bacillus_virus	4.0e-58	45.3
WP_022553493.1\|2730865_2731693_-	phage-like element PBSX protein xkdB	S6BFM4	Thermus_phage	5.2e-21	51.0
WP_014417518.1\|2731682_2731862_-	hypothetical protein	NA	NA	NA	NA
WP_003154871.1\|2732052_2732391_+	helix-turn-helix transcriptional regulator	A0A2H4J6F9	uncultured_Caudovirales_phage	8.4e-18	45.8
WP_014417517.1\|2732538_2733129_+	ImmA/IrrE family metallo-endopeptidase	A0A2H4JA43	uncultured_Caudovirales_phage	3.0e-39	51.7
WP_022553494.1\|2733267_2733873_-	poly-gamma-glutamate hydrolase family protein	A0A0Y0AJU6	Bacillus_phage	6.1e-43	48.3
WP_007610770.1\|2733982_2734360_+	PH domain-containing protein	A5GYQ0	Lactococcus_phage	1.5e-15	41.4
WP_022553495.1\|2734397_2735351_-	N-acetylmuramoyl-L-alanine amidase	A0A218KC88	Bacillus_phage	4.1e-62	69.3
WP_022553496.1\|2735493_2735628_-	PhrA family phosphatase inhibitor	NA	NA	NA	NA
WP_089072425.1\|2735617_2736754_-	S9 family peptidase	A0A1P8CWN8	Bacillus_phage	2.2e-94	47.9

DBSCAN-SWA_10

3097511 : 3166500

Bacillus_phage(56.0%)

tail,capsid,protease,portal,holin,head,plate,terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_007408834.1\|3097511_3097916_-\|holin	holin family protein	NA	NA	NA	NA
WP_007408835.1\|3098068_3098506_-	DNA starvation/stationary phase protection protein	A0A0A7RTZ1	Clostridium_phage	2.2e-47	61.4
WP_007408836.1\|3098630_3098780_+	YtzI protein	NA	NA	NA	NA
WP_022553653.1\|3098776_3099220_-	FixH family protein	NA	NA	NA	NA
WP_003152237.1\|3099334_3099808_-	S-ribosylhomocysteine lyase	NA	NA	NA	NA
WP_007408838.1\|3099932_3100160_+	membrane protein insertion efficiency factor YidD	A0A2H4PQM5	Staphylococcus_phage	1.2e-23	66.2
WP_003152233.1\|3100156_3100726_-	carbonic anhydrase	NA	NA	NA	NA
WP_003152229.1\|3100843_3101092_-	type B 50S ribosomal protein L31	NA	NA	NA	NA
WP_015418060.1\|3101289_3102621_+	cytochrome ubiquinol oxidase subunit I	NA	NA	NA	NA
WP_021494497.1\|3102643_3103684_+	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA
WP_007408842.1\|3103741_3103900_+	DUF1540 domain-containing protein	NA	NA	NA	NA
WP_017418424.1\|3103915_3104797_-	metal ABC transporter permease	NA	NA	NA	NA
WP_022553655.1\|3104786_3106073_-	metal ABC transporter permease	NA	NA	NA	NA
WP_014418707.1\|3106072_3106825_-	metal ABC transporter ATP-binding protein	A0A2R8FG22	Brazilian_cedratvirus	2.1e-13	27.1
WP_022553656.1\|3106845_3107763_-	zinc ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_014418709.1\|3108032_3109148_-	o-succinylbenzoate synthase	Q6A202	Oenococcus_phage	2.1e-12	21.6
WP_017418427.1\|3109144_3110608_-	o-succinylbenzoate--CoA ligase	A0A2H4PQM9	Staphylococcus_phage	1.0e-75	34.7
WP_003152221.1\|3110695_3111514_-	1,4-dihydroxy-2-naphthoyl-CoA synthase	NA	NA	NA	NA
WP_022553657.1\|3111572_3112397_-	2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase	NA	NA	NA	NA
WP_021494500.1\|3112384_3114121_-	2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase	NA	NA	NA	NA
WP_021494501.1\|3114117_3115533_-	isochorismate synthase MenF	NA	NA	NA	NA
WP_017418431.1\|3115815_3116535_+	TraR/DksA C4-type zinc finger protein	NA	NA	NA	NA
WP_014418714.1\|3116691_3117162_+	tryptophan-rich sensory protein	NA	NA	NA	NA
WP_007410163.1\|3124563_3125145_+	energy-coupled thiamine transporter ThiT	NA	NA	NA	NA
WP_173391192.1\|3127478_3127652_-	hypothetical protein	NA	NA	NA	NA
WP_022553659.1\|3128399_3128795_-	hypothetical protein	NA	NA	NA	NA
WP_041482559.1\|3128809_3129121_-	hypothetical protein	NA	NA	NA	NA
WP_041482560.1\|3129443_3129671_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_014417471.1\|3129718_3130021_+	hypothetical protein	NA	NA	NA	NA
WP_041482561.1\|3130099_3130252_+	hypothetical protein	NA	NA	NA	NA
WP_022553660.1\|3130315_3130993_+	hypothetical protein	NA	NA	NA	NA
WP_041482562.1\|3131024_3131267_-	helix-turn-helix domain-containing protein	A0A2H4JDR0	uncultured_Caudovirales_phage	6.6e-17	55.7
WP_022553662.1\|3131731_3132403_-	M15 family metallopeptidase	F8WPX5	Bacillus_phage	1.3e-65	72.5
WP_013353317.1\|3132444_3132852_-\|holin	phage holin family protein	D6R405	Bacillus_phage	1.6e-39	67.2
WP_022553663.1\|3132889_3133069_-	XkdX family protein	M4ZS22	Bacillus_phage	7.3e-05	55.6
WP_022553664.1\|3133070_3133217_-	hypothetical protein	NA	NA	NA	NA
WP_077199868.1\|3133230_3134709_-\|plate	BppU family phage baseplate upper protein	M4ZRP1	Bacillus_phage	1.9e-69	64.3
WP_022553666.1\|3134752_3137341_-	Pre-neck appendage protein	Q9ZXE2	Bacillus_phage	3.9e-248	51.9
WP_041482595.1\|3137355_3139221_-\|tail	phage tail protein	M5AC19	Bacillus_phage	6.7e-40	38.3
WP_022553668.1\|3139233_3140064_-\|tail	phage tail family protein	NA	NA	NA	NA
WP_157870125.1\|3140063_3143198_-	transglycosylase SLT domain-containing protein	A0A2H4JA91	uncultured_Caudovirales_phage	3.1e-58	47.4
WP_022553671.1\|3144577_3144955_-	hypothetical protein	NA	NA	NA	NA
WP_022553672.1\|3145072_3145687_-\|tail	phi13 family phage major tail protein	A0A1J0MFV0	Staphylococcus_phage	9.6e-12	28.8
WP_041482564.1\|3145686_3146073_-	DUF3168 domain-containing protein	NA	NA	NA	NA
WP_022553673.1\|3146069_3146456_-	HK97 gp10 family phage protein	Q9ZXF1	Bacillus_phage	2.1e-09	33.6
WP_041482565.1\|3146455_3146782_-\|head	phage head closure protein	NA	NA	NA	NA
WP_041482598.1\|3146762_3147035_-\|head,tail	phage gp6-like head-tail connector protein	A0A1C8E967	Bacillus_phage	3.1e-15	47.7
WP_022553675.1\|3147015_3148314_-\|capsid	phage major capsid protein	A0A1C8E976	Bacillus_phage	1.2e-93	54.3
WP_041482599.1\|3148313_3148910_-\|head,protease	HK97 family phage prohead protease	A0A1B2APW1	Phage_Wrath	4.9e-53	60.0
WP_022553677.1\|3148875_3150087_-\|portal	phage portal protein	A0A2H4J9C7	uncultured_Caudovirales_phage	1.5e-109	51.7
WP_022553678.1\|3150099_3151854_-\|terminase	terminase large subunit	A0A1C8E985	Bacillus_phage	8.1e-189	55.8
WP_022553679.1\|3151850_3152270_-\|terminase	P27 family phage terminase small subunit	A0A1B0T688	Bacillus_phage	9.1e-22	42.6
WP_041482566.1\|3152336_3152705_-	HNH endonuclease	A0A1B0T6C5	Bacillus_phage	1.8e-29	51.2
WP_022553680.1\|3152701_3152878_-	hypothetical protein	NA	NA	NA	NA
WP_041482567.1\|3152883_3153225_-	hypothetical protein	NA	NA	NA	NA
WP_157870121.1\|3153224_3153395_-	hypothetical protein	NA	NA	NA	NA
WP_022553681.1\|3153396_3153906_-	hypothetical protein	NA	NA	NA	NA
WP_041482569.1\|3154174_3154390_-	hypothetical protein	NA	NA	NA	NA
WP_022553682.1\|3154563_3155118_-	HNH endonuclease	Q38137	Bacillus_phage	1.6e-05	30.9
WP_173391193.1\|3158055_3158229_+	hypothetical protein	NA	NA	NA	NA
WP_162147389.1\|3158620_3158779_-	hypothetical protein	NA	NA	NA	NA
WP_022553686.1\|3158823_3159675_-	phage antirepressor KilAC domain-containing protein	A0A0A7S0G2	Clostridium_phage	1.3e-38	40.2
WP_157870122.1\|3159773_3159914_-	hypothetical protein	NA	NA	NA	NA
WP_022553687.1\|3159962_3160925_-	hypothetical protein	NA	NA	NA	NA
WP_041482571.1\|3161213_3161426_+	hypothetical protein	NA	NA	NA	NA
WP_022553688.1\|3161531_3163124_+	recombinase family protein	A0A288WFZ3	Bacillus_phage	1.0e-33	27.9
WP_014418716.1\|3163471_3164002_-	NfeD family protein	NA	NA	NA	NA
WP_014418717.1\|3164148_3164637_+	DinB family protein	NA	NA	NA	NA
WP_014721712.1\|3164638_3165220_-	MOSC domain-containing protein	NA	NA	NA	NA
WP_014418719.1\|3165291_3166500_-\|holin	choline dehydrogenase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage