CRISPRimmunity

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NC_022529	Campylobacter jejuni 4031, complete genome	2 crisprs	DEDDh,WYL,cas2,cas1,cas9,csa3	0	7	3	0

1. NC_022529

CRISPR-Cas detection and classification

Crispr_ID: NC_022529_1

• CRISPR_ID: NC_022529_1
• CRISPR_location: 1375197-1375276
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_022529_1

Consensus_repeat	Method
TCTTTTTGTTCTTTTAAAGCTTC	CRISPRCasFinder

spacers of NC_022529_1

>1.1|1375220|34|NC_022529|CRISPRCasFinder
TTTTTTAGCTTTATACTCAGCCTTACTCATATAA

CRISPR arrays and Neighbor proteins around NC_022529_1

CRISPR arrays

The CRISPR arrays of NC_022529_1

>merge|NC_022529|1|1375197-1375276|CRISPRCasFinder
TCTTTTTGTTCTTTTAAAGCTTCTTTTTTAGCTTTATACTCAGCCTTACTCATATAATCTTTTTGTTCTTTTAAAGCATC

>NC_022529|1|1|1375197-1375276|CRISPRCasFinder
TCTTTTTGTTCTTTTAAAGCTTC	TTTTTTAGCTTTATACTCAGCCTTACTCATATAA
TCTTTTTGTTCTTTTAAAGCATC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_022529.1|WP_022552399.1|1384250_1385504_-|cation:proton-antiporter	unknown	unknown	gnl|CDD|223551
NC_022529.1|WP_002877378.1|1373165_1374164_-|type-I-glyceraldehyde-3-phosphate-dehydrogenase	unknown	unknown	gnl|CDD|223135
NC_022529.1|WP_022552397.1|1380922_1382107_-|capsule-polysaccharide-modification-protein-KpsS	unknown	unknown	gnl|CDD|226092
NC_022529.1|WP_022552393.1|1365486_1366827_+|MmgE/PrpD-family-protein	unknown	unknown	gnl|CDD|377179
NC_022529.1|WP_002877372.1|1367129_1368971_+|ferrous-iron-transport-protein-B	unknown	unknown	gnl|CDD|223447
NC_022529.1|WP_014517091.1|1374223_1374769_+|nicotinate-(nicotinamide)-nucleotide-adenylyltransferase	unknown	unknown	gnl|CDD|223985
NC_022529.1|WP_014517093.1|1378371_1379733_-|cytochrome-P450	unknown	unknown	gnl|CDD|225035
NC_022529.1|WP_014517092.1|1375578_1376949_-|phosphoglucosamine-mutase-PgmL	unknown	unknown	gnl|CDD|100091
NC_022529.1|WP_002877376.1|1370464_1371289_-|enoyl-ACP-reductase-FabI	unknown	unknown	gnl|CDD|181416
NC_022529.1|WP_002825806.1|1377607_1377955_+|holo-ACP-synthase	unknown	unknown	gnl|CDD|223807
NC_022529.1|WP_002783833.1|1371960_1373163_-|phosphoglycerate-kinase	unknown	unknown	gnl|CDD|234613
NC_022529.1|WP_002880391.1|1377955_1378375_-|hypothetical-protein	unknown	unknown	unknown
NC_022529.1|WP_022552398.1|1382103_1384173_-|capsular-polysaccharide-biosynthesis-protein	unknown	unknown	gnl|CDD|226093
NC_022529.1|WP_022552396.1|1379729_1380851_-|hypothetical-protein	unknown	unknown	unknown
NC_022529.1|WP_022552400.1|1385513_1386473_-|pyruvate-kinase	unknown	unknown	gnl|CDD|223545
NC_022529.1|WP_002855339.1|1374796_1375123_+|ribosome-silencing-factor	unknown	unknown	gnl|CDD|223870
NC_022529.1|WP_022552394.1|1368967_1370461_-|hydrogenase-small-subunit	unknown	unknown	gnl|CDD|224654
NC_022529.1|WP_002779147.1|1366908_1367133_+|ferrous-iron-transport-protein-A	unknown	unknown	gnl|CDD|224830
NC_022529.1|WP_002877377.1|1371292_1371964_-|triose-phosphate-isomerase	unknown	unknown	gnl|CDD|234589
NC_022529.1|WP_002855429.1|1377071_1377608_+|flagellar-basal-body-associated-protein-FliL	unknown	unknown	gnl|CDD|181433

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_022529.1|WP_022552399.1|1384250_1385504_-|cation:proton-antiporter	gnl|CDD|223551	COG0475, KefB, Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism].	1.63011e-28
NC_022529.1|WP_002877378.1|1373165_1374164_-|type-I-glyceraldehyde-3-phosphate-dehydrogenase	gnl|CDD|223135	COG0057, GapA, Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase [Carbohydrate transport and metabolism].	3.35917e-168
NC_022529.1|WP_022552397.1|1380922_1382107_-|capsule-polysaccharide-modification-protein-KpsS	gnl|CDD|226092	COG3562, KpsS, Capsule polysaccharide export protein [Cell envelope biogenesis, outer membrane].	0
NC_022529.1|WP_022552393.1|1365486_1366827_+|MmgE/PrpD-family-protein	gnl|CDD|377179	pfam03972, MmgE_PrpD, MmgE/PrpD family. This family includes 2-methylcitrate dehydratase EC:4.2.1.79 (PrpD) that is required for propionate catabolism. It catalyzes the third step of the 2-methylcitric acid cycle.	7.67109e-117
NC_022529.1|WP_002877372.1|1367129_1368971_+|ferrous-iron-transport-protein-B	gnl|CDD|223447	COG0370, FeoB, Fe2+ transport system protein B [Inorganic ion transport and metabolism].	0
NC_022529.1|WP_014517091.1|1374223_1374769_+|nicotinate-(nicotinamide)-nucleotide-adenylyltransferase	gnl|CDD|223985	COG1057, NadD, Nicotinic acid mononucleotide adenylyltransferase [Coenzyme metabolism].	5.6485e-57
NC_022529.1|WP_014517093.1|1378371_1379733_-|cytochrome-P450	gnl|CDD|225035	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism].	1.78086e-78
NC_022529.1|WP_014517092.1|1375578_1376949_-|phosphoglucosamine-mutase-PgmL	gnl|CDD|100091	cd03089, PMM_PGM, The phosphomannomutase/phosphoglucomutase (PMM/PGM) bifunctional enzyme catalyzes the reversible conversion of 1-phospho to 6-phospho-sugars (e.g. between mannose-1-phosphate and mannose-6-phosphate or glucose-1-phosphate and glucose-6-phosphate) via a bisphosphorylated sugar intermediate. The reaction involves two phosphoryl transfers, with an intervening 180 degree reorientation of the reaction intermediate during catalysis. Reorientation of the intermediate occurs without dissociation from the active site of the enzyme and is thus, a simple example of processivity, as defined by multiple rounds of catalysis without release of substrate. Glucose-6-phosphate and glucose-1-phosphate are known to be utilized for energy metabolism and cell surface construction, respectively. PMM/PGM belongs to the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Other members of this superfamily include phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the phosphoglucomutases (PGM1 and PGM2). Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.	0
NC_022529.1|WP_002877376.1|1370464_1371289_-|enoyl-ACP-reductase-FabI	gnl|CDD|181416	PRK08415, PRK08415, enoyl-[acyl-carrier-protein] reductase FabI.	0
NC_022529.1|WP_002825806.1|1377607_1377955_+|holo-ACP-synthase	gnl|CDD|223807	COG0736, AcpS, Phosphopantetheinyl transferase (holo-ACP synthase) [Lipid metabolism].	3.71491e-40
NC_022529.1|WP_002783833.1|1371960_1373163_-|phosphoglycerate-kinase	gnl|CDD|234613	PRK00073, pgk, phosphoglycerate kinase; Provisional.	0
NC_022529.1|WP_022552398.1|1382103_1384173_-|capsular-polysaccharide-biosynthesis-protein	gnl|CDD|226093	COG3563, KpsC, Capsule polysaccharide export protein [Cell envelope biogenesis, outer membrane].	0
NC_022529.1|WP_022552400.1|1385513_1386473_-|pyruvate-kinase	gnl|CDD|223545	COG0469, PykF, Pyruvate kinase [Carbohydrate transport and metabolism].	3.70188e-63
NC_022529.1|WP_002855339.1|1374796_1375123_+|ribosome-silencing-factor	gnl|CDD|223870	COG0799, COG0799, Uncharacterized homolog of plant Iojap protein [Function unknown].	8.97235e-38
NC_022529.1|WP_022552394.1|1368967_1370461_-|hydrogenase-small-subunit	gnl|CDD|224654	COG1740, HyaA, Ni,Fe-hydrogenase I small subunit [Energy production and conversion].	1.77243e-154
NC_022529.1|WP_002779147.1|1366908_1367133_+|ferrous-iron-transport-protein-A	gnl|CDD|224830	COG1918, FeoA, Fe2+ transport system protein A [Inorganic ion transport and metabolism].	1.69416e-22
NC_022529.1|WP_002877377.1|1371292_1371964_-|triose-phosphate-isomerase	gnl|CDD|234589	PRK00042, tpiA, triosephosphate isomerase; Provisional.	7.57093e-86
NC_022529.1|WP_002855429.1|1377071_1377608_+|flagellar-basal-body-associated-protein-FliL	gnl|CDD|181433	PRK08455, fliL, flagellar basal body-associated protein FliL; Reviewed.	2.19231e-91

Protein sequences

>NC_022529.1|WP_002855339.1|1374796_1375123_+|ribosome-silencing-factor
MQERIDLIVKILDEKKAEDIKTIDMSEQEYFVKYVIIAATLGERHALSLIDELKTQLKAKGEEFLNIDSSEEWSVIDLGDILIHLLTPEHRGIYNIEELLENLKKGRV
>NC_022529.1|WP_014517091.1|1374223_1374769_+|nicotinate-(nicotinamide)-nucleotide-adenylyltransferase
MKIALFGGSFDPPHNGHNSVVLEALEKLDIDKLIIMPTYINPFKQNFSADEKQRFLWVKKLWGHFPKVEICDFETKQKRPVPSIESVKYLYKLYNPSKFYLLIGADHLEKLHLWHDFEKLNSLVEFVIANRNDIEIPKNFKDLKTDKKIASSFIRNTLNINEVCEEIKDEVKKYYEKLQKN
>NC_022529.1|WP_002877378.1|1373165_1374164_-|type-I-glyceraldehyde-3-phosphate-dehydrogenase
MAVKVAINGFGRIGRCVARIILERNDIELVAINDTTDIELTKYLFKYDTVHGEFKGSVDSEGDDLVVNGKKIKVFKSRNVKDLDFAKHGAQIVLECTGAHLTMAKCQEFIDMGVQKVIMSAPAKDDTPTYVLGVNSELYKGESIISNASCTTNCLGPVCRVLQDNFGIEKGLMTTIHAYTNGQSIIDAKAKDKRRSRAAAQNIIPTSTGAAKAMKLVMPELNGKLHGQSMRVPVIDVSSVDLTAQLSRKVSKDEINEAFRKAATTNLKGILMVDDEERVSSDFITCSYGAIVASDLTQVIADDFIKVIAWYDNEWGYSSRLVDMAVYIANKA
>NC_022529.1|WP_002783833.1|1371960_1373163_-|phosphoglycerate-kinase
MSDIISIKDIDLAKKKVFIRCDFNVPQDDFLNITDDRRIRSAIPTIRYCLDNGCSVILASHLGRPKEISSKYSLEPVAKRLARLLDKEIIMAKDVIGEDAKTKAMNLKAGEILLLENLRFEKGETKNDENLAKELASMVQVYINDAFGVCHRAHSSVEAITKFFDEKHKGAGFLLQKEIDFASNLIKHPARPFVAVVGGSKVSGKLQALTNLLPKVDKLIIGGGMAFTFLKALGYDIGNSLLEEELLEEANKILTKGKNLGVKIYLPVDVVAAPACSQDAPMKFVPAQEIPNGWMGLDIGPASVRLFKEVISDAQTIWWNGPMGVFEIDKFSKGSIKMSHYISEGHATSVVGGGDTADVVARAGDADEMTFISTGGGASLELIEGKELPGVKALRSKENE
>NC_022529.1|WP_002877377.1|1371292_1371964_-|triose-phosphate-isomerase
MIFAANLKCNHTRASFKIYAEILNKTMGAKCDDIIVFPPSVVFLENENNFIQGAQNFYPCVNGAFTGELGKEHLDEFGIKCVLIGHSERRALGDEEFIKAKFDFAKEHGYKIVFCIGENLDTKNSGKTLEFLKKQLEVIDLNYEKLIIAYEPIYSIGTGVSAQATDIAKVLEFLASLTKAPLLYGGSVNENNIKEILSVNHCGGVLIGSAALKVENFIKLIKG
>NC_022529.1|WP_002877376.1|1370464_1371289_-|enoyl-ACP-reductase-FabI
MIMKGKKGLIVGVANNKSIAYGIAKACFDQGAELAFTFLNDALKKRVEPIAQEFNSNFVYELDVNNNEHLDSIAEKIKKDLGEIDFVVHAVAFAPKEALENSFLETSKEAFDIAMQTSVYSLLSLTRAVLPILKDKGSILTLSYLGGVKYVPHYNVMGVAKAALESSVRYLARDLGVKGIRVNAISAGPIKTLAASGIGDFRMILKYNEINSPLKRNVSIEDVGNSAMYLLSDLANGVTGEVHYVDAGYNIMGMGDVEKNEEGQTVLCWDNQKG
>NC_022529.1|WP_022552394.1|1368967_1370461_-|hydrogenase-small-subunit
MTKLSNEELKNILEGRIKKLENSILKEDKIVNEESVKILAKHLSLGNEIPALAQRFFQIAPKTKLVWLHLCECTGCSESLLRSELPSFDELIFDFFSLEYHETLMAANGTKAEELLEHVLEEDFILAVEGGVAAIDTFFLTIGAQGESGYEILEKLAAKAKAIFAVGTCSSYGGIQAAYPNPSKTCGISEVLSQKVVNIPGCPPSDINIIATLSFFALFGVLPELDEQNRPVWAYGKCLHDMCERKAKFESGIFAEHFDDEAAKNGACLFKVGCKGPYTYNNCPKVKFNAKTSWPVAAGHGCIACSEKNFWDEFGNYEKPMANIFSYAKLCNEELKQEFFLEEQIKILEQIDFEFESNIKLILQNIAKNKLGALLVENYKKSFEKNYAFIEQNFDENPMLSKDFWKYLEISFILVKGAFLKDKNDFLIAAKNYAFKHASPYDFKLNMNAEKPKLDVSKSFRMTLIYLCGGLDFEGVAYSILKAFEDNIAKISSLKAS
>NC_022529.1|WP_002877372.1|1367129_1368971_+|ferrous-iron-transport-protein-B
MKKIKIALVGQPNVGKSLLINALCKANMKVGNFSGVTIEKASAKTFYKNYEFEVIDLPGTYSLDGYSEEEKITRHFLNQNDYDVIVNVLDATNLERNLILSAELLSLNKKMLLALNMCDEAKKEGIELDTSVLSQEFQSQVVEISAKTKENLELLLQKIIILFESKFIPRSQFYTPLCEKSPEKEDLLYFINELSKKIITHKKEERNLTKKIDALLIHKFFGLPIFLFLMWLLFQLTFSLGQIPMDYIESGFNTLGEFVKNNISNTFIASALADGIIAGVGAVILFLPNIMILFLGIALLETTGYMSRVAFLLDGILHKFGLHGKSFIPLITGFGCSVPAFMATRTLKNKRDRLLTLFVINFMSCGARLPVYVLFIGAFFPSEKAGNYLFGIYILGAILGLCAAKFLRMTAFRGLDEPFVMEMPKYRMPNWHLVWFMVYNKAKMYLKKAGTFILLASLLIWFASNFPKSEENLNDFNAQERAIEQSYLGQFGKGIEPIFKPLELDWKLSVSLISGLAAKEVMISTMGVLYSLGKDVDETNNDLKGIIAKNIPIPSAVAFILFVMIYNPCFAATIVFSKESGKLKYTLFLFLFTCTSAYIVAFIGLYIAKILLN
>NC_022529.1|WP_002779147.1|1366908_1367133_+|ferrous-iron-transport-protein-A
MTLNELKDGQKAIIVNLNAHKELKNRLLSFGFIKNKNLKKIHSSLKNATIMVELDTSCVILRSDEAKTIEVNLI
>NC_022529.1|WP_022552393.1|1365486_1366827_+|MmgE/PrpD-family-protein
MFYSEILADFIFNLKYENIPNTVVQRAKELMLDSLGTAIVASKEECVLNAFKAFENLSTDKNTPIWVNDQKLVPIYAAMLDGIASHALDFDDTHTEAILHASAILTPLCLSYGFHVNKDAKKIIKAFIVGWEIAARVGIASKGTFHKRGFHTTAIAGIFGSVSASAILLDLNKEQIINALGLAGSFASGVNEFLSNGSNSKVLHIANAIKNGIMVAHFAKNNMSGPLSIFEGRDNIFKCFGIEEECDKTELGKALGEIWQTMQVSIKPYPSCHFAHGLIDCAIALKNDGLKADEIKSIHCFVDEVPISFICDPLEAKYTPNSAYEAKFSMPFLMALGFFDGKITLDSYENLKREEVLEFAKKISYEKRKSQGFPKYFPGHLEASLQDGRIIQKDVFINKGNFDNPLSFEELKAKFLANAQIYLDNAKANKILDQIINLENLNHFSF
>NC_022529.1|WP_014517092.1|1375578_1376949_-|phosphoglucosamine-mutase-PgmL
MLDVIFREYDIRGLYGKELNEKSVKAIGFCLGQTMLNKGCKNVSVGYDARYSANELFNYLVSGLNKAGIKIYDIGLVPTPLGYFSLYEGLKFDANVMITGSHNPKDYNGFKITINKESFFGEELKEFSKEVYKHLDDEIEENLEVEKYDILSLYVKFMCEQFSFLKDFNYKFGVDCTNGAAGVVIKPLIKALNLKAHVMFAEPDGQFPNHAPDPTEEENLSAIREFLNQNQDYSLAFAFDGDADRMVALSKTHVFCGDELCYLFAKNIPNPRILGEVKCSKNLFDEVAKFGTIFMGKTGHSNIKKMMKEKDIDLAAEVSGHIFFKHRYFGYDDGIYAFLRALELVYKGFDLESMIKALPKLYTTPEIKIHVNEEEKFKLVEEFQKEIEKGALKGVKSLCEIDGARIDFGDGWALLRASNTSPYLITRFEATSLERAKELESTVFSLFNEIKARLKN
>NC_022529.1|WP_002855429.1|1377071_1377608_+|flagellar-basal-body-associated-protein-FliL
MDEELENEETKKKKGGSLVIIIVILLFVLLLSIMGVIAWLISSSSSDESEVKEAPKEEAKADKPKVSAPTQRGSDFANIGPMYPLDPFTLNLLSDSGSRYVKCTIELEQNSELLKPELDKKVPVIRDIIIRTLTAKTFEEVSTQKGKERLKDELVGKINEILTDGFIKNVYFTDFVVS
>NC_022529.1|WP_002825806.1|1377607_1377955_+|holo-ACP-synthase
MRVGCDIIAISRIEKIHSRHGKNFLDKFLSPKEQILIKNPATLAGLWAAKEAASKALGVGICELCSFFDIEISKDEKNAPKLKYSQKITKDFNITQTSLSISHDNGFAIAIVAIV
>NC_022529.1|WP_002880391.1|1377955_1378375_-|hypothetical-protein
MKRVRVKIRANFRRRVKRTLKGSLKEKLAGTILLCAIVPLAVLGYLFIVIIGTFFNTARARQGVRALDHFVNASLFNGYAWESVSSHAWRERNRKKWARIVIKITDFFQKDHCKRANKREQPVVDFILSRNLDKQTIGK
>NC_022529.1|WP_014517093.1|1378371_1379733_-|cytochrome-P450
MSECPFFPKPYKNKASTLLTFLLKRRSWLDGLYERSYKMQTGYVKMPNFDLYVINDTKEVKRMMVDEVREFPKSAFLHELLSPLLGESIFTTNGEVWKKQRELLRPSFEMTRINKVFNLMSEAVADMMDRFSKYPNHAVIEVDEAMTFITADVIFRTIMSSKLDEGKGKKILNAFVTFQEQSVHTAMRRMFRFPKWLSYVLGDRKRTKAGDVIRQVLSDIIKPRYDMADNAEFEDILGSLLLVVDADTNKRFSFEEILDQVAMLFLAGHETTASSLTWTLYLLSLYPKEQEKAYEEITQVLQGGAIEISHLRQFKYLTNIFKESLRLYPPVGFFAREAKKDTQVRDKLIKKGSGVVIAPWLIHRHEEFWTNPHGFNPSRFEGEYKKDAYLPFGVGERICIGQGFAMQEAILILANILKTYKLELEEGFVPDVVGRLTVRSANGMRIKFSKRKL
>NC_022529.1|WP_022552396.1|1379729_1380851_-|hypothetical-protein
MNREVFYIAGYDPKSYRFYYDLFKKNLKDYSHAFNIEADLSKIEKNEQFPFFKISCEGVQTKYHFLTWNDIVKKNWSENYKDALADCYSFFRIYTITGLFIKFGKESIYQLITGYYPFFYVLFSLLFSLVLAFGSFAFLQNYMHFSLAIIIGCFLGFLLNHFLFKLGKKLAVFWIARICAFCATWQDKKIGTMQERIKLFANVIVEKLKQNESKQDYELILVAHSVGTIVCIEVLEYILRQHLDLSLLCKLKILTLGECIPLVSYQKKADEFRKKLEFVSKFDLKWYDYTSIIDGACFPQVDFFRTSGVNAKFTPPFLSAKFHTLYEKHEYKKIKRDKNKAHFLYLYSISVKGDYDFFSFIIMPKFLEEKVKI
>NC_022529.1|WP_022552397.1|1380922_1382107_-|capsule-polysaccharide-modification-protein-KpsS
MRFSTKIKKEFSGKNVLLLQGPVGNFFHLLAIKMKKKQTKVFKLNFNGGDFFFYPSGTRCKCDEKDLENFYRDFFQSKKIDAILMYNDCRIIHAKAIKVAKELGVEIWIFEEGYLRPYCITLEKDGVNANSSLPRDKNFYLSQNIFTKESIKEIPGGFKFMAFDAFLYWLFAFILAPFFNNKLHHRTLYPFEFLFWFRSLYRKYLYKITEKKLNEKIYNLEKKYFLAILQVYSDTQIKYHYKKSIEHFIEETILSFANHARAKSYLVFKHHPMDRGYKNYSKLINDLSQKYHVEGRVLYVHDTHLPVLLRKALGCITINSTVGLSAILEGCPTKVCGNAFYDFEGLSYPKKLQFFWREAHAYKPNPILACNFKKYLLQTNQFNGNFYKNFFLDK
>NC_022529.1|WP_022552398.1|1382103_1384173_-|capsular-polysaccharide-biosynthesis-protein
MKYYSTSKKLITNVKNFYTIFLYKKNLKINKDDLFFGWGRKKSGLKAMNLAKKYNTKFILLEDGFIRSLNLGVENSPSFSMVKDDIGIYYDATMPSKLENLLNTYEFKGEEIKQAKKAIELIKKYKISKYNNNLDIPDDYFQKDEKRVLIIAQTANDASLEFGLAKDFKTVDMIKDAIKENPDSKIYIKIHPDVLSGKKQSDLDINSLPKECILISENFNPIALLEFFDKVYTKTSGMGFEALIQECECVCYGMPFYAGWGLTKDKLECKRRMQKRSLEEVFYAAYILYSEYFNPYLNQKSNIFDTIQTLAKYKSIEKANSNRLFMLGFTLWKRYFIKPFFKAKNNEIIFLNSIKSLARYKLKEDDKFFIWGKKYDENTLKNLLLVKAKEQNLTSFTPKVSLVEDGFIRSISLGSDLTRPFSLIVDDKGLYIDPNKVSKLEELLQNEIFDKNMLNRAKNIIKTLLENRFSKYNGLKHEDLKINAKIGQKVILIPAQVEDDASMILGGFGLSTLDLLKEVRSKNQDAYIIFKPHPDVLSGNRVGLKDETLILEFCDEIVKDCSIDSAIKIADEIHTITSTSGFDALLRAKKVFTYGMPFYAGWGLTKDKYRCERRTRKLSLEELVAGALITYPRYINPKTKTLCEIEVCLDIMLNLQKAYFSKKYIKLAIDFKTFILRKIRRFYEFLAKK
>NC_022529.1|WP_022552399.1|1384250_1385504_-|cation:proton-antiporter
MKFESLSPENISIIFLSLGVLLFSSFVFGKLFTLFKAPKVIGEIFGGFVLGASGLYIFAPDLLTDIFNGFNEQGKILNIFYQLGLIFLMFIAGFNTQISFEKQNIKIISTLFLGGTFLSAGVGYFFIDYFKESFIGIKGNDLSFDLVFLIAIAVTSIPVISKIFFDIGVIKTRFASIVLTTSTIQDLFLWILLNITINAATNQDLTLMSNLKTAFLTLFLFIAVKVISHFFEKISFRMSTIDFFTLSFVVLFLSIAFLNMIHINPMYTSFLVGFLIKNILNNHQELREKVNGISDMAFSFFIPIYFALIGIQLNIMHEFSFNMFIFFLILACLLKFLGCYIGLNFVKISNISRINFAITMNARGGPGIVLASVAYYYQIINVSFFTTLILTVLISSMMAGYWLRYQKNKNINIFSEF
>NC_022529.1|WP_022552400.1|1385513_1386473_-|pyruvate-kinase
MKKLILTTGPSLGGKINLNQIHQDKFIYRINGAHGDIESIKNTIINLRKQKADIDILIDLPGNKIRTSGISEAIQVEKDKDFSLKIDQFNYKEFYKLVKPGMEVYANDSVFLFIVKEVNDKEIIFTSKSTGLLLNNKGMHVRNLHDNIPFLFEKDKELIKLCNEFDIAYVGASFVRKASDIQELKQVLHSNTKIISKIETLEAVNNLYSILQEVEYILIDRGDLSTEIGIEKIPRFQNYIVEMAHHNAIKVFLATQILKNMEEKPIPTIAEIDDLYNIAKSGVFGVQLSEETAVGHYVEECVKILNLIQDEINNEKIIL

Crispr_ID: NC_022529_2

• CRISPR_ID: NC_022529_2
• CRISPR_location: 1482249-1482548
• CRISPR_type: TypeII
• Repeat_type: NA
• Spacer_info: 4 spacers
• Cas_protein_info: cas2,cas1,cas9

Consensus repeat of NC_022529_2

Consensus_repeat	Method
GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	CRISPRCasFinder
GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	CRT
GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	PILER-CR

spacers of NC_022529_2

>2.1|1482285|30|NC_022529|CRISPRCasFinder,CRT
GCTTTAGGAAATGCTTTAAAACGCTTTGGA
>2.2|1482351|30|NC_022529|CRISPRCasFinder,CRT
TATGAGTTATCAAGTTTTTGTTTTTAATAA
>2.3|1482417|30|NC_022529|CRISPRCasFinder,CRT
TTTTTGAAACATCAACATCTTTAATCATAT
>2.4|1482483|30|NC_022529|CRISPRCasFinder,CRT
GAAGATGAGGTTGCGGGTTTAATAACGACG
>2.5|1482286|30|NC_022529|PILER-CR
GCTTTAGGAAATGCTTTAAAACGCTTTGGA
>2.6|1482352|30|NC_022529|PILER-CR
TATGAGTTATCAAGTTTTTGTTTTTAATAA
>2.7|1482418|30|NC_022529|PILER-CR
TTTTTGAAACATCAACATCTTTAATCATAT
>2.8|1482484|30|NC_022529|PILER-CR
GAAGATGAGGTTGCGGGTTTAATAACGACG

CRISPR arrays and Neighbor proteins around NC_022529_2

CRISPR arrays

The CRISPR arrays of NC_022529_2

>merge|NC_022529|2|1482249-1482548|CRISPRCasFinder,CRT,PILER-CR
TTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAATGCTTTAGGAAATGCTTTAAAACGCTTTGGAGTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAATTATGAGTTATCAAGTTTTTGTTTTTAATAAGTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAATTTTTTGAAACATCAACATCTTTAATCATATGTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAATGAAGATGAGGTTGCGGGTTTAATAACGACGGTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT

>NC_022529|2|2|1482249-1482548|CRISPRCasFinder
TTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	GCTTTAGGAAATGCTTTAAAACGCTTTGGA
GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	TATGAGTTATCAAGTTTTTGTTTTTAATAA
GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	TTTTTGAAACATCAACATCTTTAATCATAT
GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	GAAGATGAGGTTGCGGGTTTAATAACGACG
GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT

>NC_022529|2|1|1482249-1482548|CRT
TTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	GCTTTAGGAAATGCTTTAAAACGCTTTGGA
GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	TATGAGTTATCAAGTTTTTGTTTTTAATAA
GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	TTTTTGAAACATCAACATCTTTAATCATAT
GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	GAAGATGAGGTTGCGGGTTTAATAACGACG
GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT

>NC_022529|2|1|1482250-1482548|PILER-CR
TTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAATG	CTTTAGGAAATGCTTTAAAACGCTTTGGAG
TTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAATT	ATGAGTTATCAAGTTTTTGTTTTTAATAAG
TTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAATT	TTTTGAAACATCAACATCTTTAATCATATG
TTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAATG	AAGATGAGGTTGCGGGTTTAATAACGACGG
TTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_022529.1|WP_002877469.1|1477455_1478604_-|carboxynorspermidine-decarboxylase	unknown	unknown	gnl|CDD|273414
NC_022529.1|WP_022552433.1|1473468_1476273_-|formate-dehydrogenase-subunit-alpha	unknown	unknown	gnl|CDD|239153
NC_022529.1|WP_002867218.1|1490237_1490987_+|diaminopimelate-epimerase	unknown	unknown	gnl|CDD|234768
NC_022529.1|WP_012006785.1|1476438_1477152_-|molecular-chaperone-TorD-family-protein	unknown	unknown	gnl|CDD|225916
NC_022529.1|WP_002855377.1|1490961_1491693_+|glucosaminidase-domain-containing-protein	unknown	unknown	gnl|CDD|225539
NC_022529.1|WP_002874621.1|1478727_1480269_+|multicopper-oxidase-CueO	unknown	unknown	gnl|CDD|225043
NC_022529.1|WP_002851546.1|1492791_1493241_-|DNA-starvation/stationary-phase-protection-protein	unknown	unknown	gnl|CDD|223854
NC_022529.1|WP_002867064.1|1483117_1484008_-|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl|CDD|274694
NC_022529.1|WP_022552435.1|1484004_1486959_-|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	COG3513_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl|CDD|226044
NC_022529.1|WP_002867062.1|1480492_1480939_+|molybdenum-cofactor-biosynthesis-protein-MoaE	unknown	unknown	gnl|CDD|223391
NC_022529.1|WP_171770385.1|1482693_1483107_-|CRISPR-associated-endonuclease-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	gnl|CDD|226043
NC_022529.1|WP_002867063.1|1480942_1482133_+|molybdopterin-molybdotransferase-MoeA	unknown	unknown	gnl|CDD|223380
NC_022529.1|WP_002860686.1|1489635_1490241_+|dephospho-CoA-kinase	unknown	unknown	gnl|CDD|234620
NC_022529.1|WP_002855824.1|1471901_1472834_-|formate-dehydrogenase-subunit-gamma	unknown	unknown	gnl|CDD|130645
NC_022529.1|WP_002851537.1|1476272_1476464_-|twin-arginine-translocation-signal-domain-containing-protein	unknown	unknown	gnl|CDD|236534
NC_022529.1|WP_002851264.1|1472830_1473472_-|4Fe-4S-dicluster-domain-containing-protein	unknown	unknown	gnl|CDD|319893
NC_022529.1|WP_002860682.1|1493367_1494588_-|glucose-6-phosphate-isomerase	unknown	unknown	gnl|CDD|235168
NC_022529.1|WP_002867061.1|1480270_1480492_+|MoaD/ThiS-family-protein	unknown	unknown	gnl|CDD|224888
NC_022529.1|WP_002860683.1|1491689_1492727_-|ATP-binding-protein	unknown	unknown	gnl|CDD|224292
NC_022529.1|WP_002867219.1|1488585_1489575_-|phosphoribosylformylglycinamidine-cyclo-ligase	unknown	unknown	gnl|CDD|235439

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NC_022529.1|WP_171770385.1|1482693_1483107_-|CRISPR-associated-endonuclease-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	3.5e-55	180.0	0.7
NC_022529.1|WP_002867064.1|1483117_1484008_-|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	4.5e-98	322.5	8.6
NC_022529.1|WP_022552435.1|1484004_1486959_-|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	COG3513_cas9_CAS-II-A:CAS-II-B:CAS-II-C	0	1171.3	70.8

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_022529.1|WP_002877469.1|1477455_1478604_-|carboxynorspermidine-decarboxylase	gnl|CDD|273414	TIGR01047, carboxynorspermidine_decarboxylase, carboxynorspermidine decarboxylase. This protein is related to diaminopimelate decarboxylase. It is the last enzyme in norspermidine biosynthesis by an unusual pathway shown in Vibrio alginolyticus. [Central intermediary metabolism, Polyamine biosynthesis].	0
NC_022529.1|WP_022552433.1|1473468_1476273_-|formate-dehydrogenase-subunit-alpha	gnl|CDD|239153	cd02752, MopB_Formate-Dh-Na-like, Formate dehydrogenase N, alpha subunit (Formate-Dh-Na) is a major component of nitrate respiration in bacteria such as in the E. coli formate dehydrogenase N (Fdh-N). Fdh-N is a membrane protein that is a complex of three different subunits and is the major electron donor to the nitrate respiratory chain. Also included in this CD is the Desulfovibrio gigas tungsten formate dehydrogenase, DgW-FDH. In contrast to Fdh-N, which is a functional heterotrimer, DgW-FDH is a heterodimer. The DgW-FDH complex is composed of a large subunit carrying the W active site and one [4Fe-4S] center, and a small subunit that harbors a series of three [4Fe-4S] clusters as well as a putative vacant binding site for a fourth cluster. The smaller subunit is not included in this alignment. Members of the MopB_Formate-Dh-Na-like CD belong to the molybdopterin_binding (MopB) superfamily of proteins.	0
NC_022529.1|WP_002867218.1|1490237_1490987_+|diaminopimelate-epimerase	gnl|CDD|234768	PRK00450, dapF, diaminopimelate epimerase; Provisional.	1.07556e-92
NC_022529.1|WP_012006785.1|1476438_1477152_-|molecular-chaperone-TorD-family-protein	gnl|CDD|225916	COG3381, TorD, Uncharacterized component of anaerobic dehydrogenases [General function prediction only].	0.000581315
NC_022529.1|WP_002855377.1|1490961_1491693_+|glucosaminidase-domain-containing-protein	gnl|CDD|225539	COG2992, Bax, Uncharacterized FlgJ-related protein [General function prediction only].	1.57422e-98
NC_022529.1|WP_002874621.1|1478727_1480269_+|multicopper-oxidase-CueO	gnl|CDD|225043	COG2132, SufI, Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism].	6.65373e-119
NC_022529.1|WP_002851546.1|1492791_1493241_-|DNA-starvation/stationary-phase-protection-protein	gnl|CDD|223854	COG0783, Dps, DNA-binding ferritin-like protein (oxidative damage protectant) [Inorganic ion transport and metabolism].	5.92874e-51
NC_022529.1|WP_002867064.1|1483117_1484008_-|type-II-CRISPR-associated-endonuclease-Cas1	gnl|CDD|274694	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is a prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 variant of the NMENI subtype of CRISPR/Cas system.	2.27175e-120
NC_022529.1|WP_022552435.1|1484004_1486959_-|type-II-CRISPR-RNA-guided-endonuclease-Cas9	gnl|CDD|226044	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms].	0
NC_022529.1|WP_002867062.1|1480492_1480939_+|molybdenum-cofactor-biosynthesis-protein-MoaE	gnl|CDD|223391	COG0314, MoaE, Molybdopterin converting factor, large subunit [Coenzyme metabolism].	1.04214e-42
NC_022529.1|WP_171770385.1|1482693_1483107_-|CRISPR-associated-endonuclease-Cas2	gnl|CDD|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	2.3054e-55
NC_022529.1|WP_002867063.1|1480942_1482133_+|molybdopterin-molybdotransferase-MoeA	gnl|CDD|223380	COG0303, MoeA, Molybdopterin biosynthesis enzyme [Coenzyme metabolism].	1.19384e-142
NC_022529.1|WP_002860686.1|1489635_1490241_+|dephospho-CoA-kinase	gnl|CDD|234620	PRK00081, coaE, dephospho-CoA kinase; Reviewed.	7.32317e-69
NC_022529.1|WP_002855824.1|1471901_1472834_-|formate-dehydrogenase-subunit-gamma	gnl|CDD|130645	TIGR01583, Formate_dehydrogenase_cytochrome_b556_subunit, formate dehydrogenase, gamma subunit. This model represents the gamma chain of the gamma proteobacteria (and Aquifex aolicus) formate dehydrogenase. This subunit is integral to the cytoplasmic membrane, consisting of 4 transmembrane helices, and receives electrons from the beta subunit. The entire E. coli formate dehydrogenase N (nitrate-inducible form) has been crystallized. The gamma subunit contains two cytochromes, heme b(P) and heme b(C) near the periplasmic and cytoplasmic sides of the membrane respectively. The electron acceptor quinone binds at the cytoplasmic heme histidine ligand. NiFe-hydrogenase and thiosulfate reductase contain homologous gamma subunits, and these can be found scoring in the noise of this model. [Energy metabolism, Anaerobic, Energy metabolism, Electron transport].	4.52433e-86
NC_022529.1|WP_002851537.1|1476272_1476464_-|twin-arginine-translocation-signal-domain-containing-protein	gnl|CDD|236534	PRK09476, napG, quinol dehydrogenase periplasmic component; Provisional.	0.00441722
NC_022529.1|WP_002851264.1|1472830_1473472_-|4Fe-4S-dicluster-domain-containing-protein	gnl|CDD|319893	cd16371, DMSOR_beta_like, uncharacterized subfamily of DMSO Reductase beta subunit family. This family consists of the small beta iron-sulfur (FeS) subunit of the DMSO Reductase (DMSOR) family. Members of this family also contain a large, periplasmic molybdenum-containing alpha subunit and may have a small gamma subunit as well. Examples of heterodimeric members with alpha and beta subunits include arsenite oxidase, and tungsten-containing formate dehydrogenase (FDH-T) while heterotrimeric members containing alpha, beta, and gamma subunits include formate dehydrogenase-N (FDH-N), and nitrate reductase (NarGHI). The beta subunit contains four Fe4/S4 and/or Fe3/S4 clusters which transfer the electrons from the alpha subunit to a hydrophobic integral membrane protein, presumably a cytochrome containing two b-type heme groups. The reducing equivalents are then transferred to menaquinone, which finally reduces the electron-accepting enzyme system.	6.18245e-57
NC_022529.1|WP_002860682.1|1493367_1494588_-|glucose-6-phosphate-isomerase	gnl|CDD|235168	PRK03868, PRK03868, glucose-6-phosphate isomerase; Provisional.	0
NC_022529.1|WP_002867061.1|1480270_1480492_+|MoaD/ThiS-family-protein	gnl|CDD|224888	COG1977, MoaD, Molybdopterin converting factor, small subunit [Coenzyme metabolism].	1.67964e-11
NC_022529.1|WP_002860683.1|1491689_1492727_-|ATP-binding-protein	gnl|CDD|224292	COG1373, COG1373, Predicted ATPase (AAA+ superfamily) [General function prediction only].	4.14058e-33
NC_022529.1|WP_002867219.1|1488585_1489575_-|phosphoribosylformylglycinamidine-cyclo-ligase	gnl|CDD|235439	PRK05385, PRK05385, phosphoribosylaminoimidazole synthetase; Provisional.	0

Protein sequences

>NC_022529.1|WP_002867063.1|1480942_1482133_+|molybdopterin-molybdotransferase-MoeA
MLMSYEESLKILHSHIKTYEKIEKIALTECLGRILAQDIKAPKNQPEFPTSAMDGYAIKFEDQDKPLKILGLTPAGTMPQFSVQNGTCVKTFTGSLMSEGSDTLVPVENVRVENDTLFIEKKVPQAFAVRAVGENYKKDEILLKKGTKLNYSEIALLAELGFFHISVFIKPIVGVLSSGSEIKDLGEALENPAQIRSSNHIAIANLAKNLNCDTRVFPLLKDDEKATFSTLESALQSCDILITTGGVSMGDFDFLKKAVKEYEIIIDKADIKPGRHIKIAKANEKFIIALPGFPYSAMVMFNLYAREILNSWLLQPKDYICKAFLQGSYKKKTPYLEFVACNVEFKNGRILANLEGKKEGSSAIINNLNNKAALMVVPKECEILENESLVDIIFMP
>NC_022529.1|WP_002867062.1|1480492_1480939_+|molybdenum-cofactor-biosynthesis-protein-MoaE
MKHFTLYQGSLDIPKIYSQWYEFAKDKNCGALLTFCGIVREEGGIEALSFDIYEPLLKKWFDEWQKRVDFDDISLLFAHSIGDVAVHESSYFAGILSKQRKLGLKLLNEFVEDFKASAPIWKYDVINKERIYAKERSTKLCGAGLLKG
>NC_022529.1|WP_002867061.1|1480270_1480492_+|MoaD/ThiS-family-protein
MIKVEFLGPINKENLELEVKNLKELKEILQKDESLKEWLELCAVSLNDEIIFDENTKLKDGDKIALLPPVCGG
>NC_022529.1|WP_002874621.1|1478727_1480269_+|multicopper-oxidase-CueO
MNRRNFLKFNALTLASMGVAYANPMHDMHSMHKNHSINHDLDTSFINFAPKNLKLLDPKQFPQGEILKALPLLKNESKEKNIFRATLEIKENHIELIKGKKTLFYTYNGLVPAPKIEVFEGDKLEILVKNKLKEATTIHWHGVPVPPDQDGSPHDPILAGKERIYRFEIPQDSAGTYWYHPHPHYTTSKQVFMGLAGAFVIKAKKDALSHLKEKDLMISDLRLDENAQIPNNNLNDWLNGREGEFVLINGQFKPKIKLATNERIRIYNATAARYLNLRIQGAKFILVGTDGGLIEKAIYKEELFLSPASRVEVLIDAPKDGNFKLESAYYDRDKMMVKEEPNTLFLANISLKKENVELPKNLKIFKPSEEPKEFKEIIMSEDHMQMHGMMGKSESELKIALASMFLINGKSYDLKRIDLSSKLGVVEDWIVINKSHMDHPFHIHGTQFELISSKLNGKVQKAEFRALRDTINVRPNEELRLRMKQDFKGLRMYHCHILEHEDLGMMGNLEVKE
>NC_022529.1|WP_002877469.1|1477455_1478604_-|carboxynorspermidine-decarboxylase
MFYEKIQTPAYILEEDKLRKNCELLASVGEKSGAKVLLALKGFAFSGAMKIVGEYLKGCTCSGLWEAKFAKEYMDKEIHTYSPAFKEDEIGEIASLSHHIVFNSLAQFHKFQSKTQKNSLGLRCNVEFSLAPKELYNPCGRYSRLGIRAKDFENVDLNAIEGLHFHALCEESADALEAVLKVFKEKFGKWIGQMKWVNFGGGHHITKKGYDVEKLIALCKNFSDKYGVQVYLEPGEAVGWQTGNLVASVVDIIENEKQIAILDTSSEAHMPDTIIMPYTSEVLNARILATRENEKISDLKENEFAYLLTGNTCLAGDVMGEYAFDKKLKIGDKIVFLDQIHYTIVKNTTFNGIRLPNLMLLDHKNELQMIREFSYKDYSLRN
>NC_022529.1|WP_012006785.1|1476438_1477152_-|molecular-chaperone-TorD-family-protein
MEALMDLEKLRLARSLYYQCLGELFVFSFSEERLSKLQEYLKTMQECLFDENLKSNFDILLKHLDDENSIQAFFKEYDLLFLSLKNSIPTTFSYIEEGFENSNPLLCVRQILVKSKIRRNEKFFKESEDSVGFCLLLMSEFLRQNEDDLAKELFEKVINKSIDEFLGDVFMNKNANLYKEIASIAMAFMEFERLCFEVEKPAKINSKKVQNDLSRSEFLRREANKQRRTREKSQGIS
>NC_022529.1|WP_002851537.1|1476272_1476464_-|twin-arginine-translocation-signal-domain-containing-protein
MKNRREFLKKSAFALGAAGVLGSTTLALAKDEERKDLVKGKSKKKEVLFQRSANWENYYIKAE
>NC_022529.1|WP_022552433.1|1473468_1476273_-|formate-dehydrogenase-subunit-alpha
MSSVGENIKLTRRSFLKMAALSSLATPLLARSETLREASADELKEAYEGSKKVKTVCTACSVGCGIIAEVQNGVWVRQEIAQDHPVSSGGHCCKGSDMIDMVRSHVRLKYPMKKENGEWKRISYEQALSEIGEKLAAYRKENPESVMFLGSAKMSNEQAYYVRKFAAFFGTNNVDHQARIUHSATVAGVANTFGYGAMTNHLGDIQRSKCIIIIGANPAVNHPVGFRHFLKAKEKGAKLIVVDPRFTKSAAKADIYARIRPGTDIAFMYGMLKIIFDEGLEDTKYLDERVFGIDKIREEAAKWTAEEVENVTGISKELLVQITHEVAKNKPTTLIWAMGLTQHTVGTSNTRLAPIVQMVLGNIGKFGGGVNILRGHDNVQGASDMACLSENLPGYYPLNEATWRYYAKIWGVDYEWLLGNFVSKDWMHKTGLSLARWWAAALNGKDGNDAIDNAGTPLKALVVMGNGITSTAQQVKVKEGLEALELLVLADPFVNEAGIIAERKDGIYLLPAATQFETSGSVTATNRSGQWRFKVVDPLYESMEDQEILFELAKKLGFYEDFTKTLRDEKGEIVWPENATREIAKAVRSIGLNGWSPERLKKHTLYWDKFDEVTLEGKDEVAGEYYGLPWPCWSDKHPGSPVLYNTDIEVAKGGMGFRNNFGLEYEGESLLAKNAPLNSPIDTGYPQITKDNIEKVLGITLSAQEKEKMGSTWSYDDSNIIATKCIEKGIVPYGNAKARAVVWTFKDKIPLHREPLHSPRNDLVQKYPSFEDQKALYRVDTKFVSVQQAKDYSKEFPLNLVTARLVNLNGAGMENRASMYLTRLTPEMFCEINPELAKEQDIKAGDMIWVHSPEGTKIHVRVKVNPGVAKDMIFLPFHFTGVMQGVDLTHNFPKGTKPYASGESANTVTNYGYDIMCQIPETKGGLCRISKDGK
>NC_022529.1|WP_002851264.1|1472830_1473472_-|4Fe-4S-dicluster-domain-containing-protein
MSKVNFANLEKERLKFFCDNERCIDCNGCAVACDEAHELPIHIRRRRVITLNEGIQGKEVSTSISCMHCDDAPCSIVCPVDCFYIRADGIVLHDKEICIGCGYCLYACPFGAPQFPKDSVFGNKGIMDKCTMCAGGPEATNSEKERELYGQNRIAEGKVPVCAAMCSTKALLVGESSKIEEIYHNRLMNRNYGIPNPSESLEWKIAYTGKERL
>NC_022529.1|WP_002855824.1|1471901_1472834_-|formate-dehydrogenase-subunit-gamma
MRKVFVTLLLSVASLFAYGSERMGQDTQIWDFHRITNIPNYDTFGKLWTTLQGEYIATIALIAVIAVLSAFALHYMVIGPKQFSHDGKKIYAFTLFERLFHFIAAISWVILVPTGFVMMFGATFGGGLFVRVCKNLHAFATVLFIISIIPMFLWWIKRMLPASYDIRWMMIVGGYLSKVKRPVPAGKFNFGQKSWYYIAVFGGFLMIITGGFMYFLDFNSTAIQGLFGLTQIELLRISAIVHNFLGIVCAVFFGVHIYMAVFAIKGSIHSMISGYKEEEEVYILHSYWYKELSNKKQIEPSFSYDPNVKI
>NC_022529.1|WP_171770385.1|1482693_1483107_-|CRISPR-associated-endonuclease-Cas2
MRVLLMFDVPTKSKKEQKLASKFRNNLIKLGYFMLQFSVYMRICKGLSSAKSSIENVKKILPPYGNVRALIITEKQFDKMELLLGGIVFNEKVNNETNLTLFDIDSHGEFKYKNSNNEEIQLNKKQEKYHQQNLFEF
>NC_022529.1|WP_002867064.1|1483117_1484008_-|type-II-CRISPR-associated-endonuclease-Cas1
MSYDEAFKTLLISSNAKLNLELNHLVIKQDENIAKLFLKDINIIVLESLQVSLSSALFNAFARHKIILLTCDETHSINGVFTPFLGHFQSAKIAKEQMNVSAQKKAILWQKIIKNKILNQAFVLKKHNKIGQSNELINLAKKVSLNDSKNIEAVAAALYFKTLFGVSFSRDELCFENSALNYGYAIIRACIIRAVCISGLLPWLGIKHDNIYNSFALCDDLIEVFRASVDDCVLKLKGESEFLSKDDKRALIGNLQSKINFDGQNYPLNRAINHYVANFKNALLYEDELKIVKFDD
>NC_022529.1|WP_022552435.1|1484004_1486959_-|type-II-CRISPR-RNA-guided-endonuclease-Cas9
MARILAFDIGISSIGWAFSENDELKDCGVRIFTKAENPKTGESLALPRRLARSARKRLARRKARLNHLKHLIANEFKLNYEDYQSFDESLAKAYKGSLISPYELRFRALNELLSKQDFARVILHIAKRRGYDDIKNSDDKEKGAILKAIKQNEEKLANYQSVGEYLYKEYFQKFKENSKEFTNVRNKKESYERCIAQSFLKDELKLIFKKQREFGFSFSKKFEEEVLSVAFYKRALKDFSHLVGNCSFFTDEKRAPKNSPLAFMFVALTRIINLLNNLKNTEGILYTKDDLNALLNEVLKNGTLTYKQTKKLLGLSDDYEFKGEKGTYFIEFKKYKEFIKALGDHSLSQDDLNEIAKDITLIKDEIKLKKALAKYDLNQNQIDSLSKLEFKDHLNISFKALKLITPLMLEGKKYDEACNELNLKVAINEDKKDFLPAFNETYYKDEVTNPVVLRAIKEYRKILNALLKKYGKVHKINIELAREVGKNHSQRAKIEKEQNENYKAKKDAEIECEKLGLKINSKNILKLRLFKEQKEFCAYSGEKIKLSDLQDEKMLEIDHIYPYSRSFDDSYMNKVLVFTKQNQEKLNKTPFEAFGNDSTKWQKIEVLAKNLPEKKQKRILDKNYKDKEQKDFKDRNLNDTRYIARLVLNYTKDYLDFLPLSDDENTKLNDTQKGSKVHVEAKSGMLTSALRHTWGFSAKDRNNHLHHAIDAAIIAYANNSIVKAFSDFKKEQESNSVELYAKKISELDYKNKRKFFEPFSGFRQKVLDKIDEIFVSKPERKKPSGALHEETFRKEEEFYQSYGGKEGVLKALELGKIRKVNGKIVKNGDMFRVDIFKHKKTNKFYAVPIYTMDFALKVLPNKAVARSKKGEIKDWILMDENYEFCFSLYKDSLILIQTKDMQEPELVYFNAFTSSTVSLIVSKHDNKFETLSKNQKILFKNANEKEVIAKSIGIQNLKVFEKYIVSALGEVTKAEFRQREDFKK
>NC_022529.1|WP_002867219.1|1488585_1489575_-|phosphoribosylformylglycinamidine-cyclo-ligase
MKISYEDAGVSIDNGNAFVEAIKPLVKETFNDNVVGGIGSFAGAFRMPSGFKKPVILGATDGVGTKLRLAIDAKKYDTIGQDLVAMCVNDLICNFATPLFFLDYYATAKLEVEVAKAVVSGIAKGCKMANCALIGGETAEMPGMYAKDDFDLAGFAVGMAEEDEIDRSKFVKNGDILLALPSSGLHSNGYSLARKVLFESLKLKFDDKIEDKNLIDILLEPTRIYVRDFLTLKPYISALAHITGGGLVENLPRVLPRGMGATIRKHHLKTPEIFYIIGQAVEESEMYRSFNMGVGLVMVVDPSNVSKVLENSDAFIIGEICINEGIVLE
>NC_022529.1|WP_002860686.1|1489635_1490241_+|dephospho-CoA-kinase
MKNAFFVTASIACGKSTFIEIANSLGFKSISADKIAHKILDENALELEKIFSPFNLKNLLTKEKKIDRKILGEIVFNNKEAKKTLENFTHPKIRAKILEQMQILDKENKAFFVEIPLFFESGAYENLGKVIVIYTPKELSLKRIMQRDKLSLEAAKVRLDSQIDIEEKLKKADFIIKNTNSYVDFRQECVKVIQEISKGKM
>NC_022529.1|WP_002867218.1|1490237_1490987_+|diaminopimelate-epimerase
MKFYKYCASGNDFVITNADRKEDRSALAKELCNRYEGIGGDGFIVILPHEKYDFEWEFYNNDGSRAAMCGNGSRAAAHFAHHINKINPNMSFLTGAGIIKAKVNQDKVEVSLGKIKSVQNTFEELGKTWQLCDTGVPHLVHFCQNLDEFDTILCQKMRQKYNANVNFVKILDENHLKVRTYERGVEDETLACGTGMGACFYLAFLNKKVQNKVKITPKSGEEVGFTYKNEELFFEGKVKYCFEANYNFS
>NC_022529.1|WP_002855377.1|1490961_1491693_+|glucosaminidase-domain-containing-protein
MKPIIIFLSLFLIPLFADDLKNGFGEEYYKLDIDQKRQIFFIKMNEMFDQSFKKIEQERAFIEAFFKDAYKTGFRTSNQTNLEKLITIKNKYRIENLYDFAEYKKRIQKIPKSMGIAQALVESATGTSRFAREANNLFGEWTWGEKGLIPDLRHPDKKHKIKIFDSLQDSVYSYVLNLNRHFAYEKFRDARAKFASEGKEITGLEAIKTLDSYSERKGYYINLITKIIKRYNLEKYDTNSNNT
>NC_022529.1|WP_002860683.1|1491689_1492727_-|ATP-binding-protein
MKVLNFFYENHPKFEVSYERKNQISKPNIIIKGPRFCGKKTLIFNFLSQFKASEILFLDLYDTRFEKQSLERLADFLNENLQIKILCLYNLDFIPNLEKIKIPIILSTNIKDLNINGFEELELDYFDFEEFISVSKKNLPINNLVGLFLQSGRSKFGEKNILLRQSFTLLELEILKYLALNLGQQISISKIFIELKKRLKTSKDSVYQAIKKLENTYVIYTLKHDEKKLQKIYFKDFGLRNNLCISKDFSHLFENLVLSELFKFKEDFFYNKYFNFYSQISKIAYISSPTLDIDLIKLRAKKILPKALELGIFHVIFITLSSEDSFFEQGVKFEVISFDKFSLGF
>NC_022529.1|WP_002851546.1|1492791_1493241_-|DNA-starvation/stationary-phase-protection-protein
MSVTKQLLQMQADAHHLWVKFHNYHWNVKGLQFFSIHEYTEKAYEEMAELFDSCAERVLQLGEKAITCQKVLMENAKSPKVAKDCFTPLEVIELIKQDYEYLLAEFKKLNEAAEKESDTTTAAFAQENIAKYEKSLWMIGATLQGACKM
>NC_022529.1|WP_002860682.1|1493367_1494588_-|glucose-6-phosphate-isomerase
MLNNTLFFKQSEIHTISSYANRINDEVKSGDIGYYHLIDTSLNLIDESLAFIKDKEHIKNIVLVGMGGSSCGVKALRDMLFNEKSNQRELFILDNTSSHSFNKTLEKIKLEESLFLIISKTGSTIEVVSLFKLLIEHFKLDMQELKKYFVFITDKDSKLHQEGENLGIKCFFIPANVGGRFSILSAVGIVPLCFCGYNAKALLEGAKACFEDFFTHKKDEILQKAYHYCTHKNANINVLFSYSDAFKGFNEWYIQLIAESLGKKQGYKRIGLTPIALIGARDQHSFLQLIMDGPKNKTVTFLKIKDAQKAPIIPDIHFKFLDSLSNKVNLHELLNAQCNATMHALIAENLSVDVIELEKLDAWHAGYLMYYYELFTSTCGVMLGINTYDQPGVEVGKLILKNILNS

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NC_022529_2	2.1|1482285|30|NC_022529|CRISPRCasFinder,CRT	1482285-1482314	30	MN530981	Campylobacter phage DA10, complete genome	7439-7468	1	0.967
NC_022529_2	2.5|1482286|30|NC_022529|PILER-CR	1482286-1482315	30	MN530981	Campylobacter phage DA10, complete genome	7439-7468	1	0.967
NC_022529_2	2.2|1482351|30|NC_022529|CRISPRCasFinder,CRT	1482351-1482380	30	MN530981	Campylobacter phage DA10, complete genome	1728-1757	4	0.867
NC_022529_2	2.6|1482352|30|NC_022529|PILER-CR	1482352-1482381	30	MN530981	Campylobacter phage DA10, complete genome	1728-1757	4	0.867
NC_022529_2	2.1|1482285|30|NC_022529|CRISPRCasFinder,CRT	1482285-1482314	30	NZ_CP015333	Borrelia hermsii HS1 isolate Browne Mountain plasmid lpV47, complete sequence	32985-33014	6	0.8
NC_022529_2	2.3|1482417|30|NC_022529|CRISPRCasFinder,CRT	1482417-1482446	30	MT001829	Salmonella phage SE_PL, complete genome	186350-186379	6	0.8
NC_022529_2	2.3|1482417|30|NC_022529|CRISPRCasFinder,CRT	1482417-1482446	30	MK773491	Salmonella phage 7t3, complete genome	162386-162415	6	0.8
NC_022529_2	2.3|1482417|30|NC_022529|CRISPRCasFinder,CRT	1482417-1482446	30	MK268344	Salmonella phage Munch, complete genome	99702-99731	6	0.8
NC_022529_2	2.5|1482286|30|NC_022529|PILER-CR	1482286-1482315	30	NZ_CP015333	Borrelia hermsii HS1 isolate Browne Mountain plasmid lpV47, complete sequence	32985-33014	6	0.8
NC_022529_2	2.7|1482418|30|NC_022529|PILER-CR	1482418-1482447	30	MT001829	Salmonella phage SE_PL, complete genome	186350-186379	6	0.8
NC_022529_2	2.7|1482418|30|NC_022529|PILER-CR	1482418-1482447	30	MK773491	Salmonella phage 7t3, complete genome	162386-162415	6	0.8
NC_022529_2	2.7|1482418|30|NC_022529|PILER-CR	1482418-1482447	30	MK268344	Salmonella phage Munch, complete genome	99702-99731	6	0.8
NC_022529_2	2.2|1482351|30|NC_022529|CRISPRCasFinder,CRT	1482351-1482380	30	NZ_CP021660	Candidatus Fukatsuia symbiotica strain 5D plasmid p5D_Fsymbiotica-1, complete sequence	132458-132487	7	0.767
NC_022529_2	2.3|1482417|30|NC_022529|CRISPRCasFinder,CRT	1482417-1482446	30	MN692979	Marine virus AFVG_117M14, complete genome	33731-33760	7	0.767
NC_022529_2	2.3|1482417|30|NC_022529|CRISPRCasFinder,CRT	1482417-1482446	30	MN693304	Marine virus AFVG_25M107, complete genome	34893-34922	7	0.767
NC_022529_2	2.3|1482417|30|NC_022529|CRISPRCasFinder,CRT	1482417-1482446	30	MN693036	Marine virus AFVG_117M78, complete genome	34887-34916	7	0.767
NC_022529_2	2.3|1482417|30|NC_022529|CRISPRCasFinder,CRT	1482417-1482446	30	AP014289	Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S24-C75, *** SEQUENCING IN PROGRESS ***	15404-15433	7	0.767
NC_022529_2	2.3|1482417|30|NC_022529|CRISPRCasFinder,CRT	1482417-1482446	30	NZ_CP041255	Enterococcus faecium strain 515 plasmid p32, complete sequence	8275-8304	7	0.767
NC_022529_2	2.3|1482417|30|NC_022529|CRISPRCasFinder,CRT	1482417-1482446	30	HG796310	Uncultured bacterium plasmid pRGI00361	4351-4380	7	0.767
NC_022529_2	2.3|1482417|30|NC_022529|CRISPRCasFinder,CRT	1482417-1482446	30	NZ_KY290886	Enterococcus faecalis strain Transconjugant T4 plasmid pJH-T4, complete sequence	48134-48163	7	0.767
NC_022529_2	2.3|1482417|30|NC_022529|CRISPRCasFinder,CRT	1482417-1482446	30	NZ_CP027515	Enterococcus faecium strain AUSMDU00004028 plasmid unnamed3, complete sequence	4999-5028	7	0.767
NC_022529_2	2.3|1482417|30|NC_022529|CRISPRCasFinder,CRT	1482417-1482446	30	MN855776	Siphoviridae sp. isolate 36, complete genome	8743-8772	7	0.767
NC_022529_2	2.6|1482352|30|NC_022529|PILER-CR	1482352-1482381	30	NZ_CP021660	Candidatus Fukatsuia symbiotica strain 5D plasmid p5D_Fsymbiotica-1, complete sequence	132458-132487	7	0.767
NC_022529_2	2.7|1482418|30|NC_022529|PILER-CR	1482418-1482447	30	MN692979	Marine virus AFVG_117M14, complete genome	33731-33760	7	0.767
NC_022529_2	2.7|1482418|30|NC_022529|PILER-CR	1482418-1482447	30	MN693304	Marine virus AFVG_25M107, complete genome	34893-34922	7	0.767
NC_022529_2	2.7|1482418|30|NC_022529|PILER-CR	1482418-1482447	30	MN693036	Marine virus AFVG_117M78, complete genome	34887-34916	7	0.767
NC_022529_2	2.7|1482418|30|NC_022529|PILER-CR	1482418-1482447	30	AP014289	Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S24-C75, *** SEQUENCING IN PROGRESS ***	15404-15433	7	0.767
NC_022529_2	2.7|1482418|30|NC_022529|PILER-CR	1482418-1482447	30	NZ_CP041255	Enterococcus faecium strain 515 plasmid p32, complete sequence	8275-8304	7	0.767
NC_022529_2	2.7|1482418|30|NC_022529|PILER-CR	1482418-1482447	30	HG796310	Uncultured bacterium plasmid pRGI00361	4351-4380	7	0.767
NC_022529_2	2.7|1482418|30|NC_022529|PILER-CR	1482418-1482447	30	NZ_KY290886	Enterococcus faecalis strain Transconjugant T4 plasmid pJH-T4, complete sequence	48134-48163	7	0.767
NC_022529_2	2.7|1482418|30|NC_022529|PILER-CR	1482418-1482447	30	NZ_CP027515	Enterococcus faecium strain AUSMDU00004028 plasmid unnamed3, complete sequence	4999-5028	7	0.767
NC_022529_2	2.7|1482418|30|NC_022529|PILER-CR	1482418-1482447	30	MN855776	Siphoviridae sp. isolate 36, complete genome	8743-8772	7	0.767
NC_022529_2	2.1|1482285|30|NC_022529|CRISPRCasFinder,CRT	1482285-1482314	30	AP013387	Uncultured Mediterranean phage uvMED DNA, complete genome, group G15, isolate: uvMED-CGR-C42-MedDCM-OCT-S29-C52	5428-5457	8	0.733
NC_022529_2	2.2|1482351|30|NC_022529|CRISPRCasFinder,CRT	1482351-1482380	30	NZ_CP020859	Lactobacillus salivarius strain ZLS006 plasmid unnamed1, complete sequence	30567-30596	8	0.733
NC_022529_2	2.2|1482351|30|NC_022529|CRISPRCasFinder,CRT	1482351-1482380	30	NC_022994	Geobacillus sp. 1121 plasmid pGTG5, complete sequence	922-951	8	0.733
NC_022529_2	2.2|1482351|30|NC_022529|CRISPRCasFinder,CRT	1482351-1482380	30	CP033551	Acinetobacter nosocomialis strain 2014S01-097 plasmid p2014S01-097-1, complete sequence	4662-4691	8	0.733
NC_022529_2	2.2|1482351|30|NC_022529|CRISPRCasFinder,CRT	1482351-1482380	30	NZ_LR214943	Mycoplasma orale strain NCTC10112 plasmid 4	3253-3282	8	0.733
NC_022529_2	2.2|1482351|30|NC_022529|CRISPRCasFinder,CRT	1482351-1482380	30	KY705259	Streptococcus phage P5641, complete genome	31863-31892	8	0.733
NC_022529_2	2.2|1482351|30|NC_022529|CRISPRCasFinder,CRT	1482351-1482380	30	NC_031024	Bacillus phage Belinda, complete genome	102279-102308	8	0.733
NC_022529_2	2.3|1482417|30|NC_022529|CRISPRCasFinder,CRT	1482417-1482446	30	NC_019679	Rivularia sp. PCC 7116 plasmid pRIV7116.01, complete sequence	22041-22070	8	0.733
NC_022529_2	2.3|1482417|30|NC_022529|CRISPRCasFinder,CRT	1482417-1482446	30	NC_028925	Enterobacteria phage vB_EcoM_VR25, complete genome	38407-38436	8	0.733
NC_022529_2	2.3|1482417|30|NC_022529|CRISPRCasFinder,CRT	1482417-1482446	30	NC_048665	Clostridium phage phiCDHM14, complete genome	26677-26706	8	0.733
NC_022529_2	2.3|1482417|30|NC_022529|CRISPRCasFinder,CRT	1482417-1482446	30	JX145342	Clostridium phage phiMMP04, complete genome	25643-25672	8	0.733
NC_022529_2	2.3|1482417|30|NC_022529|CRISPRCasFinder,CRT	1482417-1482446	30	HG796225	Clostridium phage phiCDHM13 complete genome	26709-26738	8	0.733
NC_022529_2	2.3|1482417|30|NC_022529|CRISPRCasFinder,CRT	1482417-1482446	30	LN681538	Clostridium phage phiCD481-1, complete genome	26446-26475	8	0.733
NC_022529_2	2.3|1482417|30|NC_022529|CRISPRCasFinder,CRT	1482417-1482446	30	HG798901	Clostridium phage phiCDHM11 complete genome	26706-26735	8	0.733
NC_022529_2	2.5|1482286|30|NC_022529|PILER-CR	1482286-1482315	30	AP013387	Uncultured Mediterranean phage uvMED DNA, complete genome, group G15, isolate: uvMED-CGR-C42-MedDCM-OCT-S29-C52	5428-5457	8	0.733
NC_022529_2	2.6|1482352|30|NC_022529|PILER-CR	1482352-1482381	30	NZ_CP020859	Lactobacillus salivarius strain ZLS006 plasmid unnamed1, complete sequence	30567-30596	8	0.733
NC_022529_2	2.6|1482352|30|NC_022529|PILER-CR	1482352-1482381	30	NC_022994	Geobacillus sp. 1121 plasmid pGTG5, complete sequence	922-951	8	0.733
NC_022529_2	2.6|1482352|30|NC_022529|PILER-CR	1482352-1482381	30	CP033551	Acinetobacter nosocomialis strain 2014S01-097 plasmid p2014S01-097-1, complete sequence	4662-4691	8	0.733
NC_022529_2	2.6|1482352|30|NC_022529|PILER-CR	1482352-1482381	30	NZ_LR214943	Mycoplasma orale strain NCTC10112 plasmid 4	3253-3282	8	0.733
NC_022529_2	2.6|1482352|30|NC_022529|PILER-CR	1482352-1482381	30	KY705259	Streptococcus phage P5641, complete genome	31863-31892	8	0.733
NC_022529_2	2.6|1482352|30|NC_022529|PILER-CR	1482352-1482381	30	NC_031024	Bacillus phage Belinda, complete genome	102279-102308	8	0.733
NC_022529_2	2.7|1482418|30|NC_022529|PILER-CR	1482418-1482447	30	NC_019679	Rivularia sp. PCC 7116 plasmid pRIV7116.01, complete sequence	22041-22070	8	0.733
NC_022529_2	2.7|1482418|30|NC_022529|PILER-CR	1482418-1482447	30	NC_028925	Enterobacteria phage vB_EcoM_VR25, complete genome	38407-38436	8	0.733
NC_022529_2	2.7|1482418|30|NC_022529|PILER-CR	1482418-1482447	30	NC_048665	Clostridium phage phiCDHM14, complete genome	26677-26706	8	0.733
NC_022529_2	2.7|1482418|30|NC_022529|PILER-CR	1482418-1482447	30	JX145342	Clostridium phage phiMMP04, complete genome	25643-25672	8	0.733
NC_022529_2	2.7|1482418|30|NC_022529|PILER-CR	1482418-1482447	30	HG796225	Clostridium phage phiCDHM13 complete genome	26709-26738	8	0.733
NC_022529_2	2.7|1482418|30|NC_022529|PILER-CR	1482418-1482447	30	LN681538	Clostridium phage phiCD481-1, complete genome	26446-26475	8	0.733
NC_022529_2	2.7|1482418|30|NC_022529|PILER-CR	1482418-1482447	30	HG798901	Clostridium phage phiCDHM11 complete genome	26706-26735	8	0.733
NC_022529_2	2.2|1482351|30|NC_022529|CRISPRCasFinder,CRT	1482351-1482380	30	NC_007930	Lactobacillus salivarius UCC118 plasmid pMP118, complete sequence	117091-117120	9	0.7
NC_022529_2	2.2|1482351|30|NC_022529|CRISPRCasFinder,CRT	1482351-1482380	30	NZ_CP017108	Lactobacillus salivarius strain CICC23174 plasmid pLS_1 sequence	4449-4478	9	0.7
NC_022529_2	2.2|1482351|30|NC_022529|CRISPRCasFinder,CRT	1482351-1482380	30	NZ_CP017108	Lactobacillus salivarius strain CICC23174 plasmid pLS_1 sequence	252391-252420	9	0.7
NC_022529_2	2.2|1482351|30|NC_022529|CRISPRCasFinder,CRT	1482351-1482380	30	CP002037	Lactobacillus salivarius CECT 5713 plasmid pHN3, complete sequence	117319-117348	9	0.7
NC_022529_2	2.6|1482352|30|NC_022529|PILER-CR	1482352-1482381	30	NC_007930	Lactobacillus salivarius UCC118 plasmid pMP118, complete sequence	117091-117120	9	0.7
NC_022529_2	2.6|1482352|30|NC_022529|PILER-CR	1482352-1482381	30	NZ_CP017108	Lactobacillus salivarius strain CICC23174 plasmid pLS_1 sequence	4449-4478	9	0.7
NC_022529_2	2.6|1482352|30|NC_022529|PILER-CR	1482352-1482381	30	NZ_CP017108	Lactobacillus salivarius strain CICC23174 plasmid pLS_1 sequence	252391-252420	9	0.7
NC_022529_2	2.6|1482352|30|NC_022529|PILER-CR	1482352-1482381	30	CP002037	Lactobacillus salivarius CECT 5713 plasmid pHN3, complete sequence	117319-117348	9	0.7
NC_022529_1	1.1|1375220|34|NC_022529|CRISPRCasFinder	1375220-1375253	34	MH752385	Bacillus phage Ray17, complete genome	8509-8542	10	0.706

1. spacer 2.1|1482285|30|NC_022529|CRISPRCasFinder,CRT matches to MN530981 (Campylobacter phage DA10, complete genome) position: , mismatch: 1, identity: 0.967

gctttaggaaatgctttaaaacgctttgga	CRISPR spacer
gctttaggaaatgctttaaaacgctttggt	Protospacer
***************************** 

2. spacer 2.5|1482286|30|NC_022529|PILER-CR matches to MN530981 (Campylobacter phage DA10, complete genome) position: , mismatch: 1, identity: 0.967

gctttaggaaatgctttaaaacgctttgga	CRISPR spacer
gctttaggaaatgctttaaaacgctttggt	Protospacer
***************************** 

3. spacer 2.2|1482351|30|NC_022529|CRISPRCasFinder,CRT matches to MN530981 (Campylobacter phage DA10, complete genome) position: , mismatch: 4, identity: 0.867

tatgagttatcaagtttttgtttttaataa	CRISPR spacer
tatgagttatcaagtttttgtatttagcag	Protospacer
********************* ****..*.

4. spacer 2.6|1482352|30|NC_022529|PILER-CR matches to MN530981 (Campylobacter phage DA10, complete genome) position: , mismatch: 4, identity: 0.867

tatgagttatcaagtttttgtttttaataa	CRISPR spacer
tatgagttatcaagtttttgtatttagcag	Protospacer
********************* ****..*.

5. spacer 2.1|1482285|30|NC_022529|CRISPRCasFinder,CRT matches to NZ_CP015333 (Borrelia hermsii HS1 isolate Browne Mountain plasmid lpV47, complete sequence) position: , mismatch: 6, identity: 0.8

gctttaggaaatgctttaaaacgctttgga	CRISPR spacer
gctttaggaaatgctctaaaatgtctttaa	Protospacer
***************.*****.*..** .*

6. spacer 2.3|1482417|30|NC_022529|CRISPRCasFinder,CRT matches to MT001829 (Salmonella phage SE_PL, complete genome) position: , mismatch: 6, identity: 0.8

tttttgaaacatcaacatctttaatcatat	CRISPR spacer
gtcctgaaaaatcaatatctttaatcattt	Protospacer
 *..***** *****.************ *

7. spacer 2.3|1482417|30|NC_022529|CRISPRCasFinder,CRT matches to MK773491 (Salmonella phage 7t3, complete genome) position: , mismatch: 6, identity: 0.8

tttttgaaacatcaacatctttaatcatat	CRISPR spacer
gtcctgaaaaatcaatatctttaatcattt	Protospacer
 *..***** *****.************ *

8. spacer 2.3|1482417|30|NC_022529|CRISPRCasFinder,CRT matches to MK268344 (Salmonella phage Munch, complete genome) position: , mismatch: 6, identity: 0.8

tttttgaaacatcaacatctttaatcatat	CRISPR spacer
gtcctgaaaaatcaatatctttaatcattt	Protospacer
 *..***** *****.************ *

9. spacer 2.5|1482286|30|NC_022529|PILER-CR matches to NZ_CP015333 (Borrelia hermsii HS1 isolate Browne Mountain plasmid lpV47, complete sequence) position: , mismatch: 6, identity: 0.8

gctttaggaaatgctttaaaacgctttgga	CRISPR spacer
gctttaggaaatgctctaaaatgtctttaa	Protospacer
***************.*****.*..** .*

10. spacer 2.7|1482418|30|NC_022529|PILER-CR matches to MT001829 (Salmonella phage SE_PL, complete genome) position: , mismatch: 6, identity: 0.8

tttttgaaacatcaacatctttaatcatat	CRISPR spacer
gtcctgaaaaatcaatatctttaatcattt	Protospacer
 *..***** *****.************ *

11. spacer 2.7|1482418|30|NC_022529|PILER-CR matches to MK773491 (Salmonella phage 7t3, complete genome) position: , mismatch: 6, identity: 0.8

tttttgaaacatcaacatctttaatcatat	CRISPR spacer
gtcctgaaaaatcaatatctttaatcattt	Protospacer
 *..***** *****.************ *

12. spacer 2.7|1482418|30|NC_022529|PILER-CR matches to MK268344 (Salmonella phage Munch, complete genome) position: , mismatch: 6, identity: 0.8

tttttgaaacatcaacatctttaatcatat	CRISPR spacer
gtcctgaaaaatcaatatctttaatcattt	Protospacer
 *..***** *****.************ *

13. spacer 2.2|1482351|30|NC_022529|CRISPRCasFinder,CRT matches to NZ_CP021660 (Candidatus Fukatsuia symbiotica strain 5D plasmid p5D_Fsymbiotica-1, complete sequence) position: , mismatch: 7, identity: 0.767

tatgagttatcaagtttttgtttttaataa	CRISPR spacer
gtagtgttgtcaaatttttgtttttaatag	Protospacer
   * ***.****.***************.

14. spacer 2.3|1482417|30|NC_022529|CRISPRCasFinder,CRT matches to MN692979 (Marine virus AFVG_117M14, complete genome) position: , mismatch: 7, identity: 0.767

tttttgaaacatcaacatctttaatcatat	CRISPR spacer
gttttgatacatcaacacctttaattttca	Protospacer
 ****** *********.*******. *  

15. spacer 2.3|1482417|30|NC_022529|CRISPRCasFinder,CRT matches to MN693304 (Marine virus AFVG_25M107, complete genome) position: , mismatch: 7, identity: 0.767

tttttgaaacatcaacatctttaatcatat	CRISPR spacer
gttttgatacatcaacacctttaattttca	Protospacer
 ****** *********.*******. *  

16. spacer 2.3|1482417|30|NC_022529|CRISPRCasFinder,CRT matches to MN693036 (Marine virus AFVG_117M78, complete genome) position: , mismatch: 7, identity: 0.767

tttttgaaacatcaacatctttaatcatat	CRISPR spacer
gttttgatacatcaacacctttaattttca	Protospacer
 ****** *********.*******. *  

17. spacer 2.3|1482417|30|NC_022529|CRISPRCasFinder,CRT matches to AP014289 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S24-C75, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 7, identity: 0.767

tttttgaaacatcaacatctttaatcatat	CRISPR spacer
attttgaaacatcaaaatctttaggcactc	Protospacer
 ************** *******. **. .

18. spacer 2.3|1482417|30|NC_022529|CRISPRCasFinder,CRT matches to NZ_CP041255 (Enterococcus faecium strain 515 plasmid p32, complete sequence) position: , mismatch: 7, identity: 0.767

tttttgaaacatcaacatctttaatcatat	CRISPR spacer
tttttgaaacatctacatttttattatcgt	Protospacer
************* ****.**** *  ..*

19. spacer 2.3|1482417|30|NC_022529|CRISPRCasFinder,CRT matches to HG796310 (Uncultured bacterium plasmid pRGI00361) position: , mismatch: 7, identity: 0.767

tttttgaaacatcaacatctttaatcatat	CRISPR spacer
gtttctgaacatcaacagctttaatcattg	Protospacer
 ***. .********** **********  

20. spacer 2.3|1482417|30|NC_022529|CRISPRCasFinder,CRT matches to NZ_KY290886 (Enterococcus faecalis strain Transconjugant T4 plasmid pJH-T4, complete sequence) position: , mismatch: 7, identity: 0.767

tttttgaaacatcaacatctttaatcatat	CRISPR spacer
tttttgaaacatctacatttttattatcgt	Protospacer
************* ****.**** *  ..*

21. spacer 2.3|1482417|30|NC_022529|CRISPRCasFinder,CRT matches to NZ_CP027515 (Enterococcus faecium strain AUSMDU00004028 plasmid unnamed3, complete sequence) position: , mismatch: 7, identity: 0.767

tttttgaaacatcaacatctttaatcatat	CRISPR spacer
tttttgaaacatctacatttttattatcgt	Protospacer
************* ****.**** *  ..*

22. spacer 2.3|1482417|30|NC_022529|CRISPRCasFinder,CRT matches to MN855776 (Siphoviridae sp. isolate 36, complete genome) position: , mismatch: 7, identity: 0.767

--tttttgaaacatcaacatctttaatcatat	CRISPR spacer
aagtattaaa--atcaacatctttaatcatta	Protospacer
   * **.**  ******************  

23. spacer 2.6|1482352|30|NC_022529|PILER-CR matches to NZ_CP021660 (Candidatus Fukatsuia symbiotica strain 5D plasmid p5D_Fsymbiotica-1, complete sequence) position: , mismatch: 7, identity: 0.767

tatgagttatcaagtttttgtttttaataa	CRISPR spacer
gtagtgttgtcaaatttttgtttttaatag	Protospacer
   * ***.****.***************.

24. spacer 2.7|1482418|30|NC_022529|PILER-CR matches to MN692979 (Marine virus AFVG_117M14, complete genome) position: , mismatch: 7, identity: 0.767

tttttgaaacatcaacatctttaatcatat	CRISPR spacer
gttttgatacatcaacacctttaattttca	Protospacer
 ****** *********.*******. *  

25. spacer 2.7|1482418|30|NC_022529|PILER-CR matches to MN693304 (Marine virus AFVG_25M107, complete genome) position: , mismatch: 7, identity: 0.767

tttttgaaacatcaacatctttaatcatat	CRISPR spacer
gttttgatacatcaacacctttaattttca	Protospacer
 ****** *********.*******. *  

26. spacer 2.7|1482418|30|NC_022529|PILER-CR matches to MN693036 (Marine virus AFVG_117M78, complete genome) position: , mismatch: 7, identity: 0.767

tttttgaaacatcaacatctttaatcatat	CRISPR spacer
gttttgatacatcaacacctttaattttca	Protospacer
 ****** *********.*******. *  

27. spacer 2.7|1482418|30|NC_022529|PILER-CR matches to AP014289 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S24-C75, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 7, identity: 0.767

tttttgaaacatcaacatctttaatcatat	CRISPR spacer
attttgaaacatcaaaatctttaggcactc	Protospacer
 ************** *******. **. .

28. spacer 2.7|1482418|30|NC_022529|PILER-CR matches to NZ_CP041255 (Enterococcus faecium strain 515 plasmid p32, complete sequence) position: , mismatch: 7, identity: 0.767

tttttgaaacatcaacatctttaatcatat	CRISPR spacer
tttttgaaacatctacatttttattatcgt	Protospacer
************* ****.**** *  ..*

29. spacer 2.7|1482418|30|NC_022529|PILER-CR matches to HG796310 (Uncultured bacterium plasmid pRGI00361) position: , mismatch: 7, identity: 0.767

tttttgaaacatcaacatctttaatcatat	CRISPR spacer
gtttctgaacatcaacagctttaatcattg	Protospacer
 ***. .********** **********  

30. spacer 2.7|1482418|30|NC_022529|PILER-CR matches to NZ_KY290886 (Enterococcus faecalis strain Transconjugant T4 plasmid pJH-T4, complete sequence) position: , mismatch: 7, identity: 0.767

tttttgaaacatcaacatctttaatcatat	CRISPR spacer
tttttgaaacatctacatttttattatcgt	Protospacer
************* ****.**** *  ..*

31. spacer 2.7|1482418|30|NC_022529|PILER-CR matches to NZ_CP027515 (Enterococcus faecium strain AUSMDU00004028 plasmid unnamed3, complete sequence) position: , mismatch: 7, identity: 0.767

tttttgaaacatcaacatctttaatcatat	CRISPR spacer
tttttgaaacatctacatttttattatcgt	Protospacer
************* ****.**** *  ..*

32. spacer 2.7|1482418|30|NC_022529|PILER-CR matches to MN855776 (Siphoviridae sp. isolate 36, complete genome) position: , mismatch: 7, identity: 0.767

--tttttgaaacatcaacatctttaatcatat	CRISPR spacer
aagtattaaa--atcaacatctttaatcatta	Protospacer
   * **.**  ******************  

33. spacer 2.1|1482285|30|NC_022529|CRISPRCasFinder,CRT matches to AP013387 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G15, isolate: uvMED-CGR-C42-MedDCM-OCT-S29-C52) position: , mismatch: 8, identity: 0.733

gctttaggaaatgctttaaaacgctttgga	CRISPR spacer
actttaggaactgctttaaaaccagttact	Protospacer
.********* ***********   **.  

34. spacer 2.2|1482351|30|NC_022529|CRISPRCasFinder,CRT matches to NZ_CP020859 (Lactobacillus salivarius strain ZLS006 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.733

tatgagttatcaagtttttgtttttaataa	CRISPR spacer
gctgaattatcaagttcttgtttttgagct	Protospacer
  ***.**********.********.*   

35. spacer 2.2|1482351|30|NC_022529|CRISPRCasFinder,CRT matches to NC_022994 (Geobacillus sp. 1121 plasmid pGTG5, complete sequence) position: , mismatch: 8, identity: 0.733

tatgagttatcaagtttttgtttttaataa	CRISPR spacer
ggttcattatcatgttgttgtttttaatat	Protospacer
 .*  .****** *** ************ 

36. spacer 2.2|1482351|30|NC_022529|CRISPRCasFinder,CRT matches to CP033551 (Acinetobacter nosocomialis strain 2014S01-097 plasmid p2014S01-097-1, complete sequence) position: , mismatch: 8, identity: 0.733

tatgagttatcaagtttttgtttttaataa	CRISPR spacer
aatactttttcaagtttttgtttttaaatt	Protospacer
 **.  ** ******************   

37. spacer 2.2|1482351|30|NC_022529|CRISPRCasFinder,CRT matches to NZ_LR214943 (Mycoplasma orale strain NCTC10112 plasmid 4) position: , mismatch: 8, identity: 0.733

tatgagttatcaagtttttgtttttaataa	CRISPR spacer
gttccattattaactttttgtttttaatat	Protospacer
  *  .****.** *************** 

38. spacer 2.2|1482351|30|NC_022529|CRISPRCasFinder,CRT matches to KY705259 (Streptococcus phage P5641, complete genome) position: , mismatch: 8, identity: 0.733

tatgagttatcaagtttttgtttttaataa	CRISPR spacer
ggtgagttatcatctttttgtttttccaca	Protospacer
 .**********  ***********    *

39. spacer 2.2|1482351|30|NC_022529|CRISPRCasFinder,CRT matches to NC_031024 (Bacillus phage Belinda, complete genome) position: , mismatch: 8, identity: 0.733

tatgagttatcaagtttttgtttttaataa	CRISPR spacer
aatgagttatcatgtttttgttccttgttt	Protospacer
 *********** *********..* .*  

40. spacer 2.3|1482417|30|NC_022529|CRISPRCasFinder,CRT matches to NC_019679 (Rivularia sp. PCC 7116 plasmid pRIV7116.01, complete sequence) position: , mismatch: 8, identity: 0.733

tttttgaaacatcaacatctttaatcatat	CRISPR spacer
agtttgaaacattaacatctttactaaccc	Protospacer
  **********.********** * *. .

41. spacer 2.3|1482417|30|NC_022529|CRISPRCasFinder,CRT matches to NC_028925 (Enterobacteria phage vB_EcoM_VR25, complete genome) position: , mismatch: 8, identity: 0.733

tttttgaaacatcaacatctttaatcatat	CRISPR spacer
caataataacatcaacatatttaatcattt	Protospacer
.  * . *********** ********* *

42. spacer 2.3|1482417|30|NC_022529|CRISPRCasFinder,CRT matches to NC_048665 (Clostridium phage phiCDHM14, complete genome) position: , mismatch: 8, identity: 0.733

tttttgaaacatcaacatctttaatcatat	CRISPR spacer
cttttgaaagttcaacatctttaacatttc	Protospacer
.********  *************.  * .

43. spacer 2.3|1482417|30|NC_022529|CRISPRCasFinder,CRT matches to JX145342 (Clostridium phage phiMMP04, complete genome) position: , mismatch: 8, identity: 0.733

tttttgaaacatcaacatctttaatcatat	CRISPR spacer
cttttgaaagttcaacatctttaacatttc	Protospacer
.********  *************.  * .

44. spacer 2.3|1482417|30|NC_022529|CRISPRCasFinder,CRT matches to HG796225 (Clostridium phage phiCDHM13 complete genome) position: , mismatch: 8, identity: 0.733

tttttgaaacatcaacatctttaatcatat	CRISPR spacer
cttttgaaagttcaacatctttaacatttc	Protospacer
.********  *************.  * .

45. spacer 2.3|1482417|30|NC_022529|CRISPRCasFinder,CRT matches to LN681538 (Clostridium phage phiCD481-1, complete genome) position: , mismatch: 8, identity: 0.733

tttttgaaacatcaacatctttaatcatat	CRISPR spacer
cttttgaaagttcaacatctttaacatttc	Protospacer
.********  *************.  * .

46. spacer 2.3|1482417|30|NC_022529|CRISPRCasFinder,CRT matches to HG798901 (Clostridium phage phiCDHM11 complete genome) position: , mismatch: 8, identity: 0.733

tttttgaaacatcaacatctttaatcatat	CRISPR spacer
cttttgaaagttcaacatctttaacatttc	Protospacer
.********  *************.  * .

47. spacer 2.5|1482286|30|NC_022529|PILER-CR matches to AP013387 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G15, isolate: uvMED-CGR-C42-MedDCM-OCT-S29-C52) position: , mismatch: 8, identity: 0.733

gctttaggaaatgctttaaaacgctttgga	CRISPR spacer
actttaggaactgctttaaaaccagttact	Protospacer
.********* ***********   **.  

48. spacer 2.6|1482352|30|NC_022529|PILER-CR matches to NZ_CP020859 (Lactobacillus salivarius strain ZLS006 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.733

tatgagttatcaagtttttgtttttaataa	CRISPR spacer
gctgaattatcaagttcttgtttttgagct	Protospacer
  ***.**********.********.*   

49. spacer 2.6|1482352|30|NC_022529|PILER-CR matches to NC_022994 (Geobacillus sp. 1121 plasmid pGTG5, complete sequence) position: , mismatch: 8, identity: 0.733

tatgagttatcaagtttttgtttttaataa	CRISPR spacer
ggttcattatcatgttgttgtttttaatat	Protospacer
 .*  .****** *** ************ 

50. spacer 2.6|1482352|30|NC_022529|PILER-CR matches to CP033551 (Acinetobacter nosocomialis strain 2014S01-097 plasmid p2014S01-097-1, complete sequence) position: , mismatch: 8, identity: 0.733

tatgagttatcaagtttttgtttttaataa	CRISPR spacer
aatactttttcaagtttttgtttttaaatt	Protospacer
 **.  ** ******************   

51. spacer 2.6|1482352|30|NC_022529|PILER-CR matches to NZ_LR214943 (Mycoplasma orale strain NCTC10112 plasmid 4) position: , mismatch: 8, identity: 0.733

tatgagttatcaagtttttgtttttaataa	CRISPR spacer
gttccattattaactttttgtttttaatat	Protospacer
  *  .****.** *************** 

52. spacer 2.6|1482352|30|NC_022529|PILER-CR matches to KY705259 (Streptococcus phage P5641, complete genome) position: , mismatch: 8, identity: 0.733

tatgagttatcaagtttttgtttttaataa	CRISPR spacer
ggtgagttatcatctttttgtttttccaca	Protospacer
 .**********  ***********    *

53. spacer 2.6|1482352|30|NC_022529|PILER-CR matches to NC_031024 (Bacillus phage Belinda, complete genome) position: , mismatch: 8, identity: 0.733

tatgagttatcaagtttttgtttttaataa	CRISPR spacer
aatgagttatcatgtttttgttccttgttt	Protospacer
 *********** *********..* .*  

54. spacer 2.7|1482418|30|NC_022529|PILER-CR matches to NC_019679 (Rivularia sp. PCC 7116 plasmid pRIV7116.01, complete sequence) position: , mismatch: 8, identity: 0.733

tttttgaaacatcaacatctttaatcatat	CRISPR spacer
agtttgaaacattaacatctttactaaccc	Protospacer
  **********.********** * *. .

55. spacer 2.7|1482418|30|NC_022529|PILER-CR matches to NC_028925 (Enterobacteria phage vB_EcoM_VR25, complete genome) position: , mismatch: 8, identity: 0.733

tttttgaaacatcaacatctttaatcatat	CRISPR spacer
caataataacatcaacatatttaatcattt	Protospacer
.  * . *********** ********* *

56. spacer 2.7|1482418|30|NC_022529|PILER-CR matches to NC_048665 (Clostridium phage phiCDHM14, complete genome) position: , mismatch: 8, identity: 0.733

tttttgaaacatcaacatctttaatcatat	CRISPR spacer
cttttgaaagttcaacatctttaacatttc	Protospacer
.********  *************.  * .

57. spacer 2.7|1482418|30|NC_022529|PILER-CR matches to JX145342 (Clostridium phage phiMMP04, complete genome) position: , mismatch: 8, identity: 0.733

tttttgaaacatcaacatctttaatcatat	CRISPR spacer
cttttgaaagttcaacatctttaacatttc	Protospacer
.********  *************.  * .

58. spacer 2.7|1482418|30|NC_022529|PILER-CR matches to HG796225 (Clostridium phage phiCDHM13 complete genome) position: , mismatch: 8, identity: 0.733

tttttgaaacatcaacatctttaatcatat	CRISPR spacer
cttttgaaagttcaacatctttaacatttc	Protospacer
.********  *************.  * .

59. spacer 2.7|1482418|30|NC_022529|PILER-CR matches to LN681538 (Clostridium phage phiCD481-1, complete genome) position: , mismatch: 8, identity: 0.733

tttttgaaacatcaacatctttaatcatat	CRISPR spacer
cttttgaaagttcaacatctttaacatttc	Protospacer
.********  *************.  * .

60. spacer 2.7|1482418|30|NC_022529|PILER-CR matches to HG798901 (Clostridium phage phiCDHM11 complete genome) position: , mismatch: 8, identity: 0.733

tttttgaaacatcaacatctttaatcatat	CRISPR spacer
cttttgaaagttcaacatctttaacatttc	Protospacer
.********  *************.  * .

61. spacer 2.2|1482351|30|NC_022529|CRISPRCasFinder,CRT matches to NC_007930 (Lactobacillus salivarius UCC118 plasmid pMP118, complete sequence) position: , mismatch: 9, identity: 0.7

tatgagttatcaagtttttgtttttaataa	CRISPR spacer
gctgaattatcaagttcttgtttttctgtt	Protospacer
  ***.**********.********     

62. spacer 2.2|1482351|30|NC_022529|CRISPRCasFinder,CRT matches to NZ_CP017108 (Lactobacillus salivarius strain CICC23174 plasmid pLS_1 sequence) position: , mismatch: 9, identity: 0.7

tatgagttatcaagtttttgtttttaataa	CRISPR spacer
gctgaattatcaagttcttgtttttctgtt	Protospacer
  ***.**********.********     

63. spacer 2.2|1482351|30|NC_022529|CRISPRCasFinder,CRT matches to NZ_CP017108 (Lactobacillus salivarius strain CICC23174 plasmid pLS_1 sequence) position: , mismatch: 9, identity: 0.7

tatgagttatcaagtttttgtttttaataa	CRISPR spacer
gctgaattatcaagttcttgtttttctgtt	Protospacer
  ***.**********.********     

64. spacer 2.2|1482351|30|NC_022529|CRISPRCasFinder,CRT matches to CP002037 (Lactobacillus salivarius CECT 5713 plasmid pHN3, complete sequence) position: , mismatch: 9, identity: 0.7

tatgagttatcaagtttttgtttttaataa	CRISPR spacer
gctgaattatcaagttcttgtttttctgtt	Protospacer
  ***.**********.********     

65. spacer 2.6|1482352|30|NC_022529|PILER-CR matches to NC_007930 (Lactobacillus salivarius UCC118 plasmid pMP118, complete sequence) position: , mismatch: 9, identity: 0.7

tatgagttatcaagtttttgtttttaataa	CRISPR spacer
gctgaattatcaagttcttgtttttctgtt	Protospacer
  ***.**********.********     

66. spacer 2.6|1482352|30|NC_022529|PILER-CR matches to NZ_CP017108 (Lactobacillus salivarius strain CICC23174 plasmid pLS_1 sequence) position: , mismatch: 9, identity: 0.7

tatgagttatcaagtttttgtttttaataa	CRISPR spacer
gctgaattatcaagttcttgtttttctgtt	Protospacer
  ***.**********.********     

67. spacer 2.6|1482352|30|NC_022529|PILER-CR matches to NZ_CP017108 (Lactobacillus salivarius strain CICC23174 plasmid pLS_1 sequence) position: , mismatch: 9, identity: 0.7

tatgagttatcaagtttttgtttttaataa	CRISPR spacer
gctgaattatcaagttcttgtttttctgtt	Protospacer
  ***.**********.********     

68. spacer 2.6|1482352|30|NC_022529|PILER-CR matches to CP002037 (Lactobacillus salivarius CECT 5713 plasmid pHN3, complete sequence) position: , mismatch: 9, identity: 0.7

tatgagttatcaagtttttgtttttaataa	CRISPR spacer
gctgaattatcaagttcttgtttttctgtt	Protospacer
  ***.**********.********     

69. spacer 1.1|1375220|34|NC_022529|CRISPRCasFinder matches to MH752385 (Bacillus phage Ray17, complete genome) position: , mismatch: 10, identity: 0.706

ttttttagctttatactcagccttactcatataa	CRISPR spacer
cttacaagctttatactcagccttattgatcgtt	Protospacer
.** . *******************.* **    

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site
DBSCAN-SWA_1	439159 : 447776	12	Campylobacter_phage(50.0%)	integrase	attL 432976:432990|attR 443360:443374
DBSCAN-SWA_2	467450 : 475882	12	Campylobacter_phage(90.0%)	NA	NA
DBSCAN-SWA_3	1386483 : 1394251	9	Tupanvirus(33.33%)	NA	NA

Sequences of DBSCAN-SWA_1

Nucleotide sequences of DBSCAN-SWA_1

>NC_022529|439159:447776|DBSCAN-SWA
TATGTCAAGAAGTACTCCTTTAAAAAAAGTTAGAAATATCGGTATTGCTGCTCACATTGATGCGGGTAAAACGACTACATCTGAAAGAATTCTTTTCTTTACAGGTATGAGTCATAAAATCGGTGAAGTTCATGATGGTGCTGCAACTATGGACTGGATGGAACAAGAGAAAGAGCGTGGGATTACTATCACTTCTGCGGCTACAACTTGTTTTTGGAAAGATCATCAAATCAATCTTATTGACACTCCAGGCCACGTGGATTTTACAATTGAAGTTGAAAGATCTATGCGTGTTCTTGATGGTGCTGTTGCGGTATTTTGTTCAGTGGGTGGGGTGCAGCCTCAAAGTGAAACAGTTTGGAGACAAGCAAATAAATACGGTGTTCCAAGAATAGTATTTGTAAATAAAATGGATAGAATCGGTGCAAATTTTTATAATGTAGAAGATCAAATTCGCAACCGTTTAAAAGCTAATCCAGTTCCACTTCAAATTCCAATTGGTGCTGAGGATAATTTTAAAGGCGTAATCGATCTTGTAACTATGAAAGCTTTAGTTTGGGAAGATGATACTAAGCCAACGGATTATGTAGAAAAAGAAATTCCAGCTGAACTTAAAGAAAAGGCAGAAGAATATCGCACAAAAATGATAGAAGCAGTTTCTGAAACTTCAGATGAGTTGATGGAAAAATATTTAGGCGGAGAAGAATTAAGCCTTGAAGAGATTAAAACAGGGATTAAAGCAGGATGTTTAAGTCTTTCTATCGTTCCTATGCTTTGCGGTACAGCGTTTAAAAATAAAGGGGTTCAACCTTTACTTGATGCTGTTGTGGCTTATTTGCCAGCTCCTGATGAAGTGGCAAATATCAAGGGTGAATATGAAGATGGCACAGAAGTTTCTGTAAAATCAACTGATGATGGCGAGTTTGCAGGGCTTGCATTTAAAATCATGACAGATCCATTTGTAGGACAACTTACTTTCGTGCGTGTTTATCGCGGTTGTTTAGAAAGCGGTTCTTATGCATATAACTCAACTAAAGATAAAAAAGAAAGAATTGGTCGTTTGTTAAAAATGCACTCTAACAAAAGAGAAGAGATTAAAGTGCTTTACGCAGGCGAAATTGGTGCTGTTGTAGGACTTAAAGATACTTTAACAGGGGATACTCTTGCAAGTGAAAAAGATAAGGTAATCCTTGAAAGAATGGATTTTCCAGATCCAGTTATTTCTGTTGCAGTTGAGCCAAAAACTAAAGCTGATCAAGAAAAAATGTCTATTGCTTTAAATAAATTAGCACAAGAAGATCCAAGTTTTAGAGTTTCTACAGATGAAGAAAGTGGTCAAACTATCATTTCAGGTATGGGTGAGTTACACCTTGAAATTATCGTTGATAGAATGCTTCGTGAATTTAAAGTTGAAGCTGAAGTAGGTCAACCACAAGTTGCTTATCGCGAAACTATTAGAAAAACTGTTGAACAAGAATACAAATACGCTAAACAATCAGGTGGTCGTGGTCAGTATGGACATGTATTCTTACGCCTTGAACCACTTGAGCCAGGTAGTGGATATGAATTTGTTAATGATATCAAAGGTGGGGTAATTCCAAAAGAATACATTCCTGCAGTTGATAAAGGTGTTCAAGAAGCATTACAAAATGGTGTTTTAGCAGGTTATCCTGTGGAAGATGTTAAAGTAACTGTTTATGATGGAAGTTATCACGAGGTGGATTCATCTGAGATGGCATTTAAACTTGCTGCTTCTATGGGCTTTAAAGAAGGTGCTAGAAAAGCAGGTGCTGTGATCTTAGAGCCTATGATGAAAGTTGAAGTAGAAACTCCTGAAGATTATATGGGTGATGTTATTGGAGATCTTAACAAACGCCGTGGTCAAGTAAATAGCATGGATGAGCGTGGTGGAAATAAAATCATCACAGCATTTTGTCCTTTGGCTGAAATGTTTGGTTATTCTACTGATCTTAGAAGTCAAACTCAAGGTCGTGCGACTTATTCTATGGAATTTGATCACTATGATGAAGTTCCTAAAAATGTTGCGGATGAAATCATCAAAAAAAGAAACGGTTAAATTTTTAGCGGGATTTTTCCCGCTTTCTGTCCTCGTAGCTCAGCAGGATAGAGCGCAAAATTCCTAATTTTGAGGCCGTGAGTTCGAATCTCGCCGTGGACACCAAGTAGTAATTCATTAAGTAATATTAAGATACAAAATACACTATTTTAACAACTTTTCTACATTAAAATTTTTCATTATGATTGAAATTTTTTCTATTTTTTCTTATAATTCTGTAGCCATTTATGTAGCCAAAGTAAAAAAGCTAATTCTGGCTACAAAAATACTAAAAAAAGGTTTTTTTAATGCTAACTCAAAAAGATATAGACAATTTAGAAATAAAAGATAAAAGGTATATGATTAGCGTAGGAGAACCAAAAGAATTATATGTCCGAGTTAATCCAACAGGTAAAAAAGTTTTTTATTTAAGAGCTTCAAAATTTAAAAATTTTATAACAATAGGGGAATGCCAAAAAGGTGTTTTAAATGTTACAAATGCAAGAGAAAAAGCAAAAGATCTTTTAAAATCAATGTATGATGGAAAATTTATCGGCAAAAATGATAAGGTTATGACACTTGAAAAAGCAAATTTTCTTTATGTTGATATAAAATCTAAAAAATTAAATTCAGCTACAATTAAAAAAGAACAGTCAATTTTTAAAAAATATATTATTCCCACTTTGGGACAAAAAGATATAAATGAATTGAAAAAAGATGATTTTCTACCTATTTATGATTTAATGCAGAAAAAAGGAATATACGAAACAATAAAGAAAAATATATCTTTGCTATGTAGGATATTTGAGATTAGTAGGCAAAGAGGTGACTTAAAAACAGATATAATACTTCAATTGAAAGATTTAAAGAAATTTTACAATGAAGCAAATCACAATAAAGTTAAACATTTTAAAGCTATAGTAGAAGAACAAGAAATAAAAAATATGTTAGAATGTATGAAAGAATATAAAAATCATCCACGAACAAATACAACTATAATTAATGCAATTTATTTTACGCTTTTAACAGCACAAAGAAGTAAAAATATTCGATTTGCTAAATGGAGTGATATTGACTTTGAAAACAATCTTTGGATTATAAAAGCAGATGAAATGAAAGTAAGATCTAATGGTGATAATATTATCCCTTTAAATAAATATGCTTTAAAGATACTAGATATACAAAGAATTTTAAATGGAGATAAAAAGTATATTTTCGCTAATAATAATGGAACTATTAGCGAGAATTTTGCTGTAAGATTTTTTAAATTTTATAATTTAGAGCACACTATACATGGATATCGTTCTACTTTTAGAAGTGTTTATACTAATAAAAGCAATGAGTTAATTCAGCAAGGTATTAGTAAAGATATAGCAGAAATGATATTACATCATATAAGTGGTAATGAAATAGAAAGGGCTTACAACAGAGCCAAGGCAATTGATTTAAGAGTAAAACTTATGCAATGGTATGGAAATTACTTAAATTCTCTTTGTGAGTTTTGCTTTTAATGTCTTTTAGCTTTAAGCCATTTTTCTATTTCTTTTATTTCATATCTTATGGATTTTCCTATGCGAATGTAAGGTATTTTACCATCTTGTCTTAACTTAAATAATGAAGTTACACTAACTCCCAAATATTCGCTCAATTCTTTTTCTCTAAAATATTTTTTAACCATTTTCAACTCCTAATCTTTTATCTATAATTTCAAAAATAGTATCCTTGTAATAACTCCAAAGCCATTTCTGTTCTTCATCTTCTAAATCATCAACGCTTAAATTACGCCATTCTTTTATTGTTTTAGTATCACAACCTAAATTCATCATAGTTTTTGTAAAAGTCATAACATAGGTATCCAAGACAACGCTAAAGATATTTTTCATATCTCCTATACAATCCCTAAGATCTACATTTTCAAATATACAATTTTCAAATTCTGTTCTTAGAAAATTACAAAAATGAAAACTTGCTCCGCTGAAATCACAATCTATAAAAGATGCATTCTTGCTTGAAATATCATTTAAATTAGCGTTTTTAAAACTAGCACCATTTATAAATGCATTATTAAAATCTAATTCACTTAAATTTATATTTTCCAAGTTTGCATTATTTAAAGAAATCCCTTCTAAAATACAATACTCAACTAATTCTTTTTCGCTTTTCCTATCATTTTCGATAATGATAGTTTCATCAAGTCTTTTTAAAATTCCCATTTTAACTCCTTAATTCTTTTTTCTAAAAGCTCAACTTGTGCTTTTTGATATTTATAGTTAAAAAACATCAGAATGAAAAATAATACAAAAAGTAAAACTAAGATGATATTTAACATTTTTATAACCGGCAACTTTTATAATCAGCTTTATAGATTTTTTTAACTTTATAATCTATCTGTAAATTAGTTTCTATTTCTTTACAAGTTATAAACCAGAAGTTTTTATCTTCTTGTGTTAATTTATAAATAATTGAATTTCCTAAAAACCCAAAATCTTTAGATACATTGCTAAGAGCTTCATCTTTGCTGAAAGCACATATTGTATCTACAAACTTCTTTAATCTCTCATCATAAAACCCTGTACGACTTTCAATCTCTTTAATTTTTTCTAGCATACATTTATAGAAGTCAAATTTTAAGATTTCACATTTTTTATGTAATAATGCTATTAAAGTATCTAAAATTACTTTAACAGAGTCTATTTCAAAATTAGCCTTATAAATAGCAATACTATTTATTTGTGAAGCTATGTCAAAAATTTCAAAATCAACCTTATCAGACTTCATATAACATTCATAATTAGAAAACTTAACATCATTTACATTAAAACAAAATACTGCAATATCACACAAAGCTTTAACTCTTTCTAAATCATCTTTTGCTCTAAAATACTCGCTTACTTTTTCAAAAACATTACCTAAAAATTCTGCTTGTTGATTTTCATAGGTTAAACTTCTTTCACTTCTCCAATCGGCTAATCTTTCTTTAATTTCATTAAATTGTATTTCTGTCATCTTTTTTAATCCTTTGCTATCTTTTTAACTTCTTTTGTGGTATAAATCTCATTTAAAGCATGCAAGATATTAGCTTCTTTTAGTATTTTTATAAAGTTGATATCATCATTATCAAGTTTTGCTTTAAAAGCTAATTTTGAGTTTAAAGATCTTATGTTTTGATAACCATATCTATAAATTTGCATTAAAAAATATCTTCTTTCGATATCTTCGCATTGCAATAATTCTAATTCTATAAAATCTTGGAATATCTCGGCGTTTTCTATGTGATATTCTTTAGAGCTTGAGCCTTTTTCGGCTTTATAAAGTTCTTTTTTGTAATCATAAGCTTTTTTAAGCTTATCAACTAATTTCATTTTAGCAACTCCGCATTTATTATTTTCGATTTAATATTTTCATAAACATCTTTTTCAATATTAATCGCAACTTTATACCATTCTTGGTAGCATTTTTCGCAATAGCAACTAAATAAAACACAGATCATAAATCCATCATTGCTTAAAATTTTATTACAACTGTCGCAAATGCCATAACCTCCAATTTTTAAAATTTCTTGTTTGTTTAGTTTTAAGATTTTAAATTCTTTATTATTATCTATCTCTAGCATTTTTTTACTCCTTAACTACTAATAAATCCGCGTTTTCGTGGATATTACCGATAACTTTCATATTTTTTTCTGACTTAAATACTTTTAAAAAAGATATATCAGGTTCAGCTTTCCTTTTATAAATTTTATTATTAAAGTTTTTACTAAAAATTTCTATTTTAAACATTTTATAAGTATTATCTCTTGTAATATGATAAAGTTCTTCAAGAGGCTCATATTCTAATATATCATTTTCATAGATTTTATTTCCATTTTTATCAAAATAACCAGTCCATAGCTCTATTTCAGCATCATTATTAAATTCGGATAGTCTTATTTTTGCTTCTTCTCCATAAATAAAGTTCGATTGACATTTGCAGTTTTTATTATCACAACCTGTATAATTCTTATCCCAAATCCTAAAATCAAAATCTTTTAACTTCATTCTCACTCCTTAAAAATTTCTCAACATCTTCAAAAGCTTTAACAATAAGCTTTTTTTCATGAAAGAAATTTCTTCCACTTGGCTTACTTTTGTAAATTTTGTAAGCCTTTCTGAGTTCTTTTTTGCTTATGTGATTTTTATAATTTATTTTCTCGATTTTTATTTCATTTTGTTTAGCAAAATCACAAAAACAAGTTCTTCTTTCGCTAAATGGTATGATTTTTACAATTTCAAGATAATTAGAACGGCAAACTTTCATCATCATCTCCTATTTCGATATATTTTTCATTGTTATTGTTTTTTACTTCATTTCCATAAGGATTATAGCTTTGATTTTCTTTTGGAATAAATGATTTATTATTGTCGTTATTTAAAGATTTATGCCTTGCTTTAAAAGATTTTATAGATAAAGGCTCTTTATTATTTTGAAACTCATCCATGTTTTGCATTTTTTCATTAAAAATTCTATCAAGAAAGATTTTGTTAGCAATTTCTCCATTTTTACTTAAATATTCTTCTGTTCCAAAACCTAAAACTAAAAGTTTATTAACTAAAGAATTTAGATAAATAACTTCAGTCTGCACTCCAAAAACATTCTCATTTCCATTTTCACTAAAATCAAGTTCATCAATTCCAAAGAATTTCATAATGGCATTTAATTGTCTAAATCCTAAATAATTTTCTTTTTCTCCATTTTTATTGATATAGCTAAAATCGTTATTTTTAGCTACAAAAAGATTAAAAATAGCTAGTTTTTGCTCTTTTCTGGTTAAAAATTCAAAACAAATAAAAGTATTATTGCTTCCATCGCTTGCCAATTTATCATATAAAAAGGCTTTGCGGAAAACTCCACTATAAAGCCCACCTTCACTTAAATACTCTACGCTTGGCGAATAATTTGCCACTTCAAAACTTGCCTTAAATGCTGGTAACATTATAATCCTCCTTTTAATTGTGTTAAAAATTCATCTTTATTATTTAGAACTTCTTGTATTTTTTCACTTGTAAATAAAGAATGTTTTTTTATAAAATTGTTTTGCTCTTGGGTGTTTAAACCATTATCACTCATAAATTTTCTAAGTTCAGCACCTAAAGCTTTTATCTCTTTTGCTTTATTTTCTATAGCTTTTTCATCACTACCCCAAACTTTTAAATTTTCATTTGGATTTAAAAATCGCTTTTCCTTTATTGTTTCTAATTCACTCTCATCAAGCATTCCAAGTCCGCAAATACTTAAGGTTACACGCCTTTTTGCTTTTGTGATAGCTTTCATTATTGCGTTTGCTAAATTATCGCCACCTAAATTTTTAATATTTAAAGCACCTGTATCGCAATCAGTTCTTCCATCTGGTGTTGCTGCGTAGGCTGTAACCATATAAATATCGCCAACTTGTGCCACTTCTGTTTTTGTAATACTTACTTTTCTTATTTGTCTTAGCTGATCTGTTGCTGATTTATTTGCATATAAAGTAAGTTTGCCATTTAATACTATGTATTCAAAAGGCTTTGTAAGCATGTTTAAGCTTAAACTTTCACAAAGATTTTTAACATAACTCGCTCGTTCTACATCACTAAGTTTTGATAAATCACCTTTTACCAAAGCCAACTCATAAGGATTAAAATTTATTTCTAATTTATTTTCTTCTTTTAATACAACTTCATTACTCATTTTATGCTCCTTTTTTGATTTTTAAACACATTGAAATACTTTCTTTATAAAACTCTTTAGGCACAGTAATATTTTTTTGCTCTAAAAAGCCCTTATAATCAATTGTAGTTCTACTTTGCGGATAAATTGTAATATCCAAACATCTTGCTTTTTCTCCATTTGCTAAGGCTATGAGTTCTTTTTTAAGACTTTCTAGCTTTTCTTTAATAGGTTTAATCGTGTTTTCAAGCCTTATAATTTCAATCGTTAGATTTTTTGCTTTAGTATCTTCAAGCTCTTTATATTCGCTTTTTTGATCTATGATATAATCTAATATAAATTGCTTTATATTTTTAACCAACCATTCTTGATAAGCTTCATCTTTTGAAACTTCGCACTCTACAATCTCTTCTTCTTTATTCATGGCTACAAAAATGCATTTTTCTTTACCACTGATATAGAGTTGAAATTGCACTTGAGCGTAGTATTTATCACTTGGCTTTTTATTTCTTTTGATAAAATCATACTCATCTTGCGAATATTTAAACTCATAAACAACCCCATTTTCATCAATACCATCTAAGCTCGCTATAAACATTTCATTTTCTAGACTTTGCAAAACTACAGGAGTGATACTCACAGAATGTAAAAACTCAACTCTAGCTCTAATCAAAGCTTCATAGTTATTGCCTTTTTTCATAGCTTCATTTTGATAAACTTCTTTAAGTCCCAAGATGATATCTTTTGTTTCTTCTTTGGAATTAAAAGCACCTTTGATACCTACGCAAGATGCTACCATCGATGCACCTATTTTTCCTTTTCTAAAATTTAACCATTCATGGCTACCTTGTTCTAAGTCAATTATTCTGCAATTCAT

Protein sequences of DBSCAN-SWA_1

>NC_022529|439159:447776|446185_446920_-|WP_002929379.1|DBSCAN-SWA
MSNEVVLKEENKLEINFNPYELALVKGDLSKLSDVERASYVKNLCESLSLNMLTKPFEYIVLNGKLTLYANKSATDQLRQIRKVSITKTEVAQVGDIYMVTAYAATPDGRTDCDTGALNIKNLGGDNLANAIMKAITKAKRRVTLSICGLGMLDESELETIKEKRFLNPNENLKVWGSDEKAIENKAKEIKALGAELRKFMSDNGLNTQEQNNFIKKHSLFTSEKIQEVLNNKDEFLTQLKGGL
>NC_022529|439159:447776|442721_442892_-|WP_002871200.1|DBSCAN-SWA
MVKKYFREKELSEYLGVSVTSLFKLRQDGKIPYIRIGKSIRYEIKEIEKWLKAKRH
>NC_022529|439159:447776|444572_444827_-|WP_022552236.1|DBSCAN-SWA
MLEIDNNKEFKILKLNKQEILKIGGYGICDSCNKILSNDGFMICVLFSCYCEKCYQEWYKVAINIEKDVYENIKSKIINAELLK
>NC_022529|439159:447776|445490_446186_-|WP_002929378.1|DBSCAN-SWA
MLPAFKASFEVANYSPSVEYLSEGGLYSGVFRKAFLYDKLASDGSNNTFICFEFLTRKEQKLAIFNLFVAKNNDFSYINKNGEKENYLGFRQLNAIMKFFGIDELDFSENGNENVFGVQTEVIYLNSLVNKLLVLGFGTEEYLSKNGEIANKIFLDRIFNEKMQNMDEFQNNKEPLSIKSFKARHKSLNNDNNKSFIPKENQSYNPYGNEVKNNNNEKYIEIGDDDESLPF
>NC_022529|439159:447776|445231_445510_-|WP_002929377.1|DBSCAN-SWA
MKVCRSNYLEIVKIIPFSERRTCFCDFAKQNEIKIEKINYKNHISKKELRKAYKIYKSKPSGRNFFHEKKLIVKAFEDVEKFLRSENEVKRF
>NC_022529|439159:447776|444831_445251_-|WP_002929374.1|DBSCAN-SWA
MKLKDFDFRIWDKNYTGCDNKNCKCQSNFIYGEEAKIRLSEFNNDAEIELWTGYFDKNGNKIYENDILEYEPLEELYHITRDNTYKMFKIEIFSKNFNNKIYKRKAEPDISFLKVFKSEKNMKVIGNIHENADLLVVKE
>NC_022529|439159:447776|441522_442725_+|WP_002929369.1|integrase|DBSCAN-SWA
MLTQKDIDNLEIKDKRYMISVGEPKELYVRVNPTGKKVFYLRASKFKNFITIGECQKGVLNVTNAREKAKDLLKSMYDGKFIGKNDKVMTLEKANFLYVDIKSKKLNSATIKKEQSIFKKYIIPTLGQKDINELKKDDFLPIYDLMQKKGIYETIKKNISLLCRIFEISRQRGDLKTDIILQLKDLKKFYNEANHNKVKHFKAIVEEQEIKNMLECMKEYKNHPRTNTTIINAIYFTLLTAQRSKNIRFAKWSDIDFENNLWIIKADEMKVRSNGDNIIPLNKYALKILDIQRILNGDKKYIFANNNGTISENFAVRFFKFYNLEHTIHGYRSTFRSVYTNKSNELIQQGISKDIAEMILHHISGNEIERAYNRAKAIDLRVKLMQWYGNYLNSLCEFCF
>NC_022529|439159:447776|443545_444220_-|WP_022552235.1|DBSCAN-SWA
MTEIQFNEIKERLADWRSERSLTYENQQAEFLGNVFEKVSEYFRAKDDLERVKALCDIAVFCFNVNDVKFSNYECYMKSDKVDFEIFDIASQINSIAIYKANFEIDSVKVILDTLIALLHKKCEILKFDFYKCMLEKIKEIESRTGFYDERLKKFVDTICAFSKDEALSNVSKDFGFLGNSIIYKLTQEDKNFWFITCKEIETNLQIDYKVKKIYKADYKSCRL
>NC_022529|439159:447776|439159_441235_+|WP_002779472.1|DBSCAN-SWA
MSRSTPLKKVRNIGIAAHIDAGKTTTSERILFFTGMSHKIGEVHDGAATMDWMEQEKERGITITSAATTCFWKDHQINLIDTPGHVDFTIEVERSMRVLDGAVAVFCSVGGVQPQSETVWRQANKYGVPRIVFVNKMDRIGANFYNVEDQIRNRLKANPVPLQIPIGAEDNFKGVIDLVTMKALVWEDDTKPTDYVEKEIPAELKEKAEEYRTKMIEAVSETSDELMEKYLGGEELSLEEIKTGIKAGCLSLSIVPMLCGTAFKNKGVQPLLDAVVAYLPAPDEVANIKGEYEDGTEVSVKSTDDGEFAGLAFKIMTDPFVGQLTFVRVYRGCLESGSYAYNSTKDKKERIGRLLKMHSNKREEIKVLYAGEIGAVVGLKDTLTGDTLASEKDKVILERMDFPDPVISVAVEPKTKADQEKMSIALNKLAQEDPSFRVSTDEESGQTIISGMGELHLEIIVDRMLREFKVEAEVGQPQVAYRETIRKTVEQEYKYAKQSGGRGQYGHVFLRLEPLEPGSGYEFVNDIKGGVIPKEYIPAVDKGVQEALQNGVLAGYPVEDVKVTVYDGSYHEVDSSEMAFKLAASMGFKEGARKAGAVILEPMMKVEVETPEDYMGDVIGDLNKRRGQVNSMDERGGNKIITAFCPLAEMFGYSTDLRSQTQGRATYSMEFDHYDEVPKNVADEIIKKRNG
>NC_022529|439159:447776|444225_444576_-|WP_002875041.1|DBSCAN-SWA
MKLVDKLKKAYDYKKELYKAEKGSSSKEYHIENAEIFQDFIELELLQCEDIERRYFLMQIYRYGYQNIRSLNSKLAFKAKLDNDDINFIKILKEANILHALNEIYTTKEVKKIAKD
>NC_022529|439159:447776|446921_447776_-|WP_022552237.1|DBSCAN-SWA
MNCRIIDLEQGSHEWLNFRKGKIGASMVASCVGIKGAFNSKEETKDIILGLKEVYQNEAMKKGNNYEALIRARVEFLHSVSITPVVLQSLENEMFIASLDGIDENGVVYEFKYSQDEYDFIKRNKKPSDKYYAQVQFQLYISGKEKCIFVAMNKEEEIVECEVSKDEAYQEWLVKNIKQFILDYIIDQKSEYKELEDTKAKNLTIEIIRLENTIKPIKEKLESLKKELIALANGEKARCLDITIYPQSRTTIDYKGFLEQKNITVPKEFYKESISMCLKIKKGA
>NC_022529|439159:447776|442884_443427_-|WP_002827649.1|DBSCAN-SWA
MGILKRLDETIIIENDRKSEKELVEYCILEGISLNNANLENINLSELDFNNAFINGASFKNANLNDISSKNASFIDCDFSGASFHFCNFLRTEFENCIFENVDLRDCIGDMKNIFSVVLDTYVMTFTKTMMNLGCDTKTIKEWRNLSVDDLEDEEQKWLWSYYKDTIFEIIDKRLGVENG

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
432976:432990	attL	NA	NA	NA	NA
WP_002779472.1|439159_441235_+	elongation factor G	E4ZFJ7	Streptococcus_phage	6.7e-65	26.9
WP_002929369.1|441522_442725_+|integrase	site-specific integrase	X2KXI6	Campylobacter_phage	1.1e-32	30.8
WP_002871200.1|442721_442892_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_002827649.1|442884_443427_-	pentapeptide repeat-containing protein	NA	NA	NA	NA
443360:443374	attR	NA	NA	NA	NA
WP_022552235.1|443545_444220_-	hypothetical protein	A0A1D8EXE5	Campylobacter_phage	2.7e-52	53.1
WP_002875041.1|444225_444576_-	hypothetical protein	NA	NA	NA	NA
WP_022552236.1|444572_444827_-	hypothetical protein	A0A2R3ZY63	Campylobacter_phage	3.3e-35	89.2
WP_002929374.1|444831_445251_-	hypothetical protein	D5GVQ0	Campylobacter_virus	2.5e-43	61.0
WP_002929377.1|445231_445510_-	hypothetical protein	NA	NA	NA	NA
WP_002929378.1|445490_446186_-	hypothetical protein	NA	NA	NA	NA
WP_002929379.1|446185_446920_-	hypothetical protein	NA	NA	NA	NA
WP_022552237.1|446921_447776_-	YqaJ viral recombinase family protein	A0A0K0MD53	Pseudoalteromonas_phage	2.2e-06	24.3

Sequences of DBSCAN-SWA_2

Nucleotide sequences of DBSCAN-SWA_2

>NC_022529|467450:475882|DBSCAN-SWA
AATGGCTTTACCTTCAATGGGACATACCTCACCCGCAACGGAAAATGTTAAGTTAAAACAATCAATATATGAAACGATTATTAAAATTGGAGCTACTGAAACACCAATTTTAAATAAAATAGGTACTTCAAAGGTTACAAATCCTTTAACTCATAGTTGGATTACTGATACTTTTGAAGAACCAAAAAAGAATGCAAATTTAGAGTTAAGTAAATTTGTAGGTGAAACAAAAAACACAGCTCAAAAAACTACAAATGCTACTCAAATATTCATTACCGAAGCCATGGTATCAAAAGCTTTGTTAAAAGCAAATCAATATGGTGGCAATGAAATGGAGTATCAAATAGGCAAAAAAACCAAAGAACATAAAATGGATATGGAATATGCTTTATTTGGTCTAGGCAGAGATAGTGATGTAAAAAAATCAGTTTTCAAAGATTATGTTCAAGCACAAGAAGCAACAAGTGGAGAAATGGCTGGACTTTTTCATTATATCGCTAAAGGAAAAGATAGCTTTGCTGATGGAAAGCGTGGAAATGTATTAGCTTTTGATGAAACAGGAGATTGGAGCGGAACTGCAACAGAACTAACAGAAGATAAACTTAATCAAATTTTGCAAACCATTTGGAATAGCGGAGTTACGCCTAAAGATGTCTTTTTAGGAGCTGACTTAAAAGGAGCTATTAACAAATTTGCTACAAGAATTTTAGGCAATGAAACAAAACTAGCAGGACAAGTAGTAAGCCTTGAAACAGATTTTGGAACGGTAAATTTCCATATGCATAGATTATTAAGCCCTAAATATGGTTTGGGTGATGTTTTAATTGCTGGAGATTTTGAGTATATGAAACATGGGCTTTATATTCCTACTATGATTGAAGATGTTCCAACTGATATTACTGCAAAAGCAAAAAGATTTTATACGCAAAGCACTTTAGAAGTAAGAAATGCTGATGCTTTTGCTATAGGAGTGGGATTAACTAGCGGAAATAATGCAAAGGCTAAAGCGGTTTTAAAAGCAGCAAAAGGTGCATAATGCTTTGTGCTACGGCTAAAAAACTCATTATCGCTAAAGTTAAAAATTCTTACAAAATGATAGAAGATGATGAAGTTTTGAAAGCCTATTTTATGGAAGCATTTTATTATATTTTATCAAAATGTGTTCCTAGCGTTCTTTTAAAAAATGTAGAGCAAGGCGAAAAAGTTTTTAGGCAAGTTAGAAATAATCATTTTTTGATTATTCCTGATGAGCCTGATTTTGACAATGAAAAAGAACATTTAATGATAGATGAAACACTTAGTTTTGCTGTGATTAATTATGTTTGTTATTTGATTACAAGATGCGAAGAAAAAGACTTTCTGGCATTATGTGACAAGATAATTTATGAGTATATAGCTAATGATGGCAAGGAGCTTGATGATGAAAGAACATGGTTGTAATTGTAATTTCACAAAAAAATTTAATAGAGCTTTGAGTTATAAAGACTATGTGCAAAGTATAAATAGTGCTGATTTTATAGCTTATTTAGATGATAAAAAATGGCTTTTAGCCATGGATGATCTGCTTTTCTTTTGTGAAAAGAGAATTAAAGATAGTGATTATTATGAAGGTTAAAAATGGGAACAAGCTTAAATGAATTAAAAACAGGTAGAGAAAAACTTGAAATCATAAATCAAGTTTTAGCTAGAATAAACAGCATTTCAGAAGCAATAGACAATACAAGACTTGATGAAGTTGTAGGCTTAAAACAAGCTTGCGAATCTTTAAAAAATGAATGTTTAAAATTTAAAAATGATATTGTAGATAAAAATGATGATATTTTAAGCAAATATGATGATATTAATAAAAAATATTCAAATATAAGTGAAAAATACAACAATGTAAATGCAAAATTTGATTATATTAAAGAAGCGTATGAAGATTTTTCTTTAAATAAACAAGAAATACAAAACATTAAAGATTTTTTAGAAAATAATACAGAAGAGTTTGAGAATTTAAAAAAAGATATACAGAAATATGAAGAAATAAAATTTAATTTAGATAATTATATTAATGAAATTAAACAAAATAAAGATTTTGTAAAAGAATATTTTGATTTGAACACAAAAATTAAAGATGAAATTTTAAGTGAACTTAATCATGCTTTAGAAATTGTAGATAGCTTACATTTAAATGTTGATGAATTAAAAGAAATAAAACCTGAATTAATAAGTATTAAAAAAGAAGTAAAAGATTTAGCAAATGAAGCAAAATTAGTAGTAAGTGAAGCAAGCGAAATTATAAAAAATAAAATTAACACTATATTCTTTGAAAACCAAAGATTAAATCAAGAAATGATAGATAGTGTTAAAAAGCTAGAAGAAATTAAATTTGATATTGGAGTTAAATATAAAGAAATAGCTAGTGCATATGAACTACTTTTAGAAAGCAAGCAAAATATAGAAGAATTAAGAGAAGTTATAGCTTTATATAAAGAATTTGAAAATGATATAACATCTTATTCCCAAATTATAAAAGATTTTAAAAGTAAAATAGAAAATTTAGAACGAGATTTAAAATCACAGTCTGAAAGTATCTACTCTTCTTTAAATGATAAACAAAATGAAATATTAAAAAATTTAAATGAAGTAAAAAATGAAGCTTTAGTTAAATTTGATGAACTTACAGCAAAATGTGAAGGGTATAAAATACATTTTGAGCAAAGTTATGATAGGTTTAATCAAAGAGCTTTGATAGCTAATGAAGATTTAGGTAGGTTAGCTGAAGTTGCTAAAAAAGAACTAGGTAATGATAAGTTAATTTATGAAACAGAATTAAAAGTTTTAGCTGAAGAAACAATAAAACAAATGGAAGAAATGCTCAAAGGTTTAAGTGATGAAAGAAATGAAGTCACAGAGGTTTTTGAAACTCAAAAGAAAGAATTTACTACTCTTGTAGATACTTCTAAAGTTATGATTGACAACTTAAATCATATTTTTAATGCGAATTATCAAGCAAAGAAAAATGAGTTTAGTATTATTTTTAATGAAAAATTGCATAGTTTAAACGAGAATAAGCAAGATTTTTTAAATGAGCTTGTGAGCGCAAAAGAAAACGGACTCAATAAAATAAATGAAACAAAAGAGCAAAGCCTTAATGAAATAATCCAAACAAAAGAACAAGGACTTAATGAGCTTGAAACTAAAAAAGGTGAGTGCATAGATGAGATTGACAATCAAGCAAGAATCTATGATATAAGTGGTGTTAAGGCTAATGTTGAATATCTTCTTTCTTTGCTTAATGAGAAAGATGATGGTAAAGATGATGGAATTAAAGATGAAATTGCAAATATAGAGCAAGGTATAAAAGATAAAGAACAAGAGCTTGAAGAGATAAAAAAGCAAATTGAAGAAGCTTTAAATAATAATGATGAATTAAAGCAAAAAAATGAGGAATTAAAGGAAATTAAAAATCAAATCGATGAGGCTTTAAGTCAAGAACCACCTGCTGATACAAGCGAACTTGAAGAGAGAAAAGAAGAACTTGAAAATCAAATTGCTGAGCTTGAAAAAGAGATTGCTGGTGAATTAATTAACAAAAAAGAGGAAATTGAAAAAGAACTTGAAGAAGCTAATCAAAACTTAGAAGACAAAAACAATGAGTTAGAGCAAAATGAAAAAGATAAAAAGCTAATTACACAAAAAGTATTAGATATAACTATTAAAACTTTAGAAGCACTTATAGATACAAAAGTAAGTTTAAATGGTGATGAAGAGATAAATGGAAATAAAACTTTTGCTAATCCTATTTTAGTAAAAGTAGATCCAACTAATGATAACCATTTAACAAATAAAATCTATGTAGATACCGCTTTAAATACAAAAGCAAATTTAAATGGAGATAATATATTTAATGGCACAAATACTTTTAATCAGGCATTAACTTCTCCAACCAATCCAACAAATGATAATCACTTAACTAGAAAATGGTATGTAGATTATGGTGGTGGAATTAAAAATCTTGGCACAACTGGCAGTATAAATCTAGATTTAAGACAAGCTCAACATTTTATTTTAACAGCAAATGCAGGAACAAGCATAGGAATAGCTAATTTTGGAGGAGTAGGAAAAAGCGGAACAATAACTATAAATAATTGTCAAAATGTAGTAGCTTTTAATGCCCCTTTTAATTTTAGAATAGCTCAAAGTGGATTTAGTGGCACTGAAACTTTTGCTTATTTTTGCATAGCTTCGAATAATGTAAGATTAGTAAGGACTTAAAATGAACTGCCTCCTTCTTTCTAATAATGGCATAGCACTAAATTTACCTCCATCTTTAGGAGGCTCGGTTGCAAATTATAATTATATGTTAAAGCTAGACATGATTTATAAACAAGCAGTGGTATTGCCATCAAATATTAATAATAAAGAAGTGGTTATGTTAGGCGAAGTTTGGACGACTGGAAATATGTCTAATAAAACTTCTGGAAATACTTTAGAAATAACTTGGAATAATTTTAATTCAAAAGTAACACTACATGCTTTAAGTAAATATTACACTGCCAATGCAAAAATCAAAGTAGAGAAAAAATTCAATTTTGGAAATATAAATAACTTACAAATAATGCTAAGTTCTTGGCAAAGCGGTAGTGCAAATGCAAGTGCTGGTTGGAACTTAAATGATGGGGATAGATTAAACCCAAGAGCAAATTTAACATTATACTGGAATTAAGAAAGGGTAAATATGTTTTATGATTTAAAAAATAAAAGTTTAAAATATGATGATATTTTTTTAAAAGATGTAAAAATACAAAACGAAGAAGGTGAAATTGATGCACAAGATACTTATTTTTTAAGTGCTTGCGATGATAAGCTTTTAAAAGAGCTTGGTTTTGCTAAAGTTAAAGAAGAAGAAATCCCAAGTTTTAATGAAAAAATTGAAGAACTTCGCCAAATTCAAACTTATGATGAAGAAAATAATCTTTATATTATTTCTTATGAGATTAAAGAAAAAGCATTAGAAGAGTTAAAAGAATTAAAATTAGAAGAACTAAAAGCTATAAAAGAAGAAAAGCTTTTGTTTATGCCTTTTAAAAATACTATATTTCAAATTGACACGGAAGCAAAAATTAATATTAGCGGAAAAGTTAGCGAGATAATGTTAGCAAATCTCAATAATACTCCTTTGGAAAATATTGCTTGGATTGATAAAGATAATAAAATCATTACATTTAACAAAGAAGAATTTTTAGAATTTGGGGTTGGTATCGCTAAATATACTGAAAGTATTATTTTTAAAAATGATGAACTAAGAAATAAAGTGAAAAATGCCACATCTTTAGAAGAATTAAATTTAATTGCATGGGAGAGTGAAAAATGAGTACTGAAAATATAATAAAAGAAGGTGCTATACTCGGTTCTTTAAGTGGATCTGCATTATTAGGATTGATGGTTTTTGTCTTAGCTGGGATTGCATGGCATTTATATAAAACTTTACATAAAGAAGCTGGGGAAAGAACAAAAGAACTTATAAGTGAAACCAAAAATACTAATGTTCTTATTAGAGAACAAATTGCAGTATCCAGAGCAAGTAGCGATAGTTTGGTTAAATTTATAGAAACACATTGCTCAAAAACCAATGACAAGCTAGAAGCTATAGAAACAGATCTTATGAGAATGGATGAAAGGCTTGTTAAGCTTACTCAAATAAGAAATGATGAATTAAGAAGTATTTTTAAAAAAAAGGAAAACAATGACTAAAACAGAATTAAAAAGGGTTTGTGTAAAGCCATACGATAAGGACAGGTTTGAAGTGATACAAGATTATGAGTTTATTTTACCAAATTACAAAGGCATTGTACCACAAGGTTTTAAAACTGATGGAGCGAGTATTCCACGTATTTTTTGGAGTATTTATCCACCTTTTAAAAGTGAGTATTTTAGCGCTTGTGTTGTCCATGACTATTTGTGTATAAATGCAAAATCAAGAGATGATTATAGGCTAGCTGATCTTGTTTTAAAAGAAGCAATGCAAGCTTTAGAAATAAATAAATTTAAGATTTTTGTTTTTTATTGCTCTTGTAATTTATTTCATCAGATCAAATGTTTAATAAAGGGGATAAGATGAGTTTAGAACAGGTTATAAATACTCAAAATGAAAGTTTAAATCAAATTATAAGTAGTTTACAAGAATTAGTTTTAAGTTATAAAAATGGTAATTTGAGTTTAGAAGATGTTAAAAAATTAATTAACGAAACTATTGAAAATATATCAAATGATTATATAAAAGAAAGCGAGCTAAAAGAAAAACTAGAAGCCTTGCTAGAAGAGCTTGGCATCAATGCAAATATCAATGAAGAGAGTTTAAAAGAAGTTGTATTAAAAGTTGTTTTAGAAAATCAAGAAAGTTTAAAAGGTGATAAAGGAGATCCTTTTACTTATGAAGATTTTACAGAAGAACAGCTTGAAAATTTAAAAGGGCAAGATGGAGCTAAAGGAGCTGATGGTAAAAATGCTTATGAACTTTGGCTTGAAAATGAAGAAAACACGGGAAAAAGTCAAGATGAATTTTTAGAAAGTTTAAAGGCTCAAACACCAACAAAAGAAGAAATTAAACCTATTATAGAAGAGATGCTCGAAGATATGAAATTAAATTTAGGCATTAATGGAATAAAAGTATCTAATTCTATTCCCACTCCAAAAACAAAAGCTAATGTTAATGATTTAATTATAACTTATAATGAAAATGTAAAACAACTTTGGCTTTGTGTGGCAAGTGATGATAAATACACAAGTTGGATTAATTTGCTTGGAAATGAAAATATTACAGCACAAGAGTTGATTATTATTAGTTTTGATACAAATTTAAATAGTGGTCAATATGGCGGATGTTTAAGTGATTTGCGTTTTGGTTTTGAAAATTCTTTAGCAAGCACTACGCAAATTATAAAAGGACTTAATGAAGGCAGTTTTTTAATCACTAAAGATGGAATGGGTTTAAAATCTAAAAATTATACTGAAGTTAGCGTTCTTTCAAAACCAAGTAAAAATCAAATAGAAGGAAATATCAAAACGAGCGGAATTTATAATGATCCTGCTTGGCATAATATTACCAATGCTTTAAAAAAATATGATGGCAATGCAAATGAATGCTGTCTTTGGGCTTCTAATATAAAAAATAGTGTAAGTATAGAGCTTTTTACAAATGAAATTCCTATGAGTCTTTTTTATAGGCAAGCTGGATATTATGGAAATGTCAATCTTTCAAATATAAAAATGCAAAAAGCCCTTAGAGTTCAAAATGAAATTATAGTCGAGAGAAGCTTTATAGGAATAAAAAAAGAAATTGATAAAACTACCTATGGTGATAATGCTTTTTTATTTGAATTTGAAGAAGAAAAATGAGTTTAAATCTAAAAATAAAATACAAAAAATAAAAAGAAAGGAATTATAATGAAAGTAACAATTAATAGAAGATACACAGGTAAAACTTGTGTTATTGGCAAATTTAATGTTTTAGATGATGAAGAAAAAATTCTTTTTGAATGCTTTTCTTTAGAGGAAGATAAAGAGGGTTTAGAAAGTGGTAAAGATTTAAGAATATCAGATGGTGTTTATAATTTAAAAAGACATAGTCCTTCAAGATTTGAAAATACTTTAAGAAGTATTACAAAAAAAGATGATGATACAATGATAAATGTTTATAATGATGAAGTTCCAGCAAGTCGTGCAATTTTAATACACTGGGGAAACACTGACAAAGACACACAAGGTTGTATCTTACTGGGGCTTACCAAAGATAACAATAATGAAAGCATAGGACAAAGCAGACAAGCTTGTAAAGAATTTTATGATTTGATGCATGGTAAAAATCTTGAAGATATTAAATTAGAAATAACAAATGAATTAGCATGAGTTCTATATTTTCATATATCCTAGGAGATAAAAAACTTTACATTGCTTTAGTACTTATGACAATTTTAGCAGGATATTTTTATCTAAGACTTGATAGCACTCAAGCAAAATTAGAAAAAAGTCAAAGTGATTTAGCTTTGGCTTTAAAAATAAATGAAAATAATCAAGAAAAATTAAAAGAATTAAATCAAATTCATAATGCTGAATTAAATGCTTTAAATGAAGCAAATAAGGAAAAAAATCAAGTACAAGAAAGGGTGCAATATGTTAAAGAATACATTTATAAAAGCAATGAAAATAATATTACCAAGCTTTTTAACGATGTCGTTGATAGGTTGTGGGATGCAAACTCAACAAGTAGTAACCAAAATAGAAATTCAAAAAGTTACAATTCCGCAAGAGTTATTAACACTAAGCCCCCTTGAAAAGCCAATAGCAAAAAATGAACTAGATATTTTAAATGCTTATTCTATGCTTTTTTACAAATACAAACAGTGTGAAATTCAGATAAGCAAAATAAAGGAGCTAAATAATGAGTAA

Protein sequences of DBSCAN-SWA_2

>NC_022529|467450:475882|475684_475882_+|WP_002873431.1|DBSCAN-SWA
MQTQQVVTKIEIQKVTIPQELLTLSPLEKPIAKNELDILNAYSMLFYKYKQCEIQISKIKELNNE
>NC_022529|467450:475882|470770_471709_+|WP_171838996.1|DBSCAN-SWA
MANIEQGIKDKEQELEEIKKQIEEALNNNDELKQKNEELKEIKNQIDEALSQEPPADTSELEERKEELENQIAELEKEIAGELINKKEEIEKELEEANQNLEDKNNELEQNEKDKKLITQKVLDITIKTLEALIDTKVSLNGDEEINGNKTFANPILVKVDPTNDNHLTNKIYVDTALNTKANLNGDNIFNGTNTFNQALTSPTNPTNDNHLTRKWYVDYGGGIKNLGTTGSINLDLRQAQHFILTANAGTSIGIANFGGVGKSGTITINNCQNVVAFNAPFNFRIAQSGFSGTETFAYFCIASNNVRLVRT
>NC_022529|467450:475882|468869_469064_+|WP_002799287.1|DBSCAN-SWA
MKEHGCNCNFTKKFNRALSYKDYVQSINSADFIAYLDDKKWLLAMDDLLFFCEKRIKDSDYYEG
>NC_022529|467450:475882|473551_474832_+|WP_002925120.1|DBSCAN-SWA
MSLEQVINTQNESLNQIISSLQELVLSYKNGNLSLEDVKKLINETIENISNDYIKESELKEKLEALLEELGINANINEESLKEVVLKVVLENQESLKGDKGDPFTYEDFTEEQLENLKGQDGAKGADGKNAYELWLENEENTGKSQDEFLESLKAQTPTKEEIKPIIEEMLEDMKLNLGINGIKVSNSIPTPKTKANVNDLIITYNENVKQLWLCVASDDKYTSWINLLGNENITAQELIIISFDTNLNSGQYGGCLSDLRFGFENSLASTTQIIKGLNEGSFLITKDGMGLKSKNYTEVSVLSKPSKNQIEGNIKTSGIYNDPAWHNITNALKKYDGNANECCLWASNIKNSVSIELFTNEIPMSLFYRQAGYYGNVNLSNIKMQKALRVQNEIIVERSFIGIKKEIDKTTYGDNAFLFEFEEEK
>NC_022529|467450:475882|473180_473555_+|WP_002865354.1|DBSCAN-SWA
MTKTELKRVCVKPYDKDRFEVIQDYEFILPNYKGIVPQGFKTDGASIPRIFWSIYPPFKSEYFSACVVHDYLCINAKSRDDYRLADLVLKEAMQALEINKFKIFVFYCSCNLFHQIKCLIKGIR
>NC_022529|467450:475882|472172_472808_+|WP_002789149.1|DBSCAN-SWA
MFYDLKNKSLKYDDIFLKDVKIQNEEGEIDAQDTYFLSACDDKLLKELGFAKVKEEEIPSFNEKIEELRQIQTYDEENNLYIISYEIKEKALEELKELKLEELKAIKEEKLLFMPFKNTIFQIDTEAKINISGKVSEIMLANLNNTPLENIAWIDKDNKIITFNKEEFLEFGVGIAKYTESIIFKNDELRNKVKNATSLEELNLIAWESEK
>NC_022529|467450:475882|475347_475767_+|WP_032600918.1|DBSCAN-SWA
MFSYILGDKKLYIALVLMTILAGYFYLRLDSTQAKLEKSQSDLALALKINENNQEKLKELNQIHNAELNALNEANKEKNQVQERVQYVKEYIYKSNENNITKLFNDVVDRLWDANSTSSNQNRNSKSYNSARVINTKPP
>NC_022529|467450:475882|468484_468889_+|WP_002861675.1|DBSCAN-SWA
MLCATAKKLIIAKVKNSYKMIEDDEVLKAYFMEAFYYILSKCVPSVLLKNVEQGEKVFRQVRNNHFLIIPDEPDFDNEKEHLMIDETLSFAVINYVCYLITRCEEKDFLALCDKIIYEYIANDGKELDDERTWL
>NC_022529|467450:475882|471710_472160_+|WP_002924526.1|DBSCAN-SWA
MNCLLLSNNGIALNLPPSLGGSVANYNYMLKLDMIYKQAVVLPSNINNKEVVMLGEVWTTGNMSNKTSGNTLEITWNNFNSKVTLHALSKYYTANAKIKVEKKFNFGNINNLQIMLSSWQSGSANASAGWNLNDGDRLNPRANLTLYWN
>NC_022529|467450:475882|474880_475342_+|WP_002925125.1|DBSCAN-SWA
MKVTINRRYTGKTCVIGKFNVLDDEEKILFECFSLEEDKEGLESGKDLRISDGVYNLKRHSPSRFENTLRSITKKDDDTMINVYNDEVPASRAILIHWGNTDKDTQGCILLGLTKDNNNESIGQSRQACKEFYDLMHGKNLEDIKLEITNELA
>NC_022529|467450:475882|467450_468485_+|WP_002875076.1|DBSCAN-SWA
MALPSMGHTSPATENVKLKQSIYETIIKIGATETPILNKIGTSKVTNPLTHSWITDTFEEPKKNANLELSKFVGETKNTAQKTTNATQIFITEAMVSKALLKANQYGGNEMEYQIGKKTKEHKMDMEYALFGLGRDSDVKKSVFKDYVQAQEATSGEMAGLFHYIAKGKDSFADGKRGNVLAFDETGDWSGTATELTEDKLNQILQTIWNSGVTPKDVFLGADLKGAINKFATRILGNETKLAGQVVSLETDFGTVNFHMHRLLSPKYGLGDVLIAGDFEYMKHGLYIPTMIEDVPTDITAKAKRFYTQSTLEVRNADAFAIGVGLTSGNNAKAKAVLKAAKGA
>NC_022529|467450:475882|472804_473188_+|WP_002869963.1|DBSCAN-SWA
MSTENIIKEGAILGSLSGSALLGLMVFVLAGIAWHLYKTLHKEAGERTKELISETKNTNVLIREQIAVSRASSDSLVKFIETHCSKTNDKLEAIETDLMRMDERLVKLTQIRNDELRSIFKKKENND

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002875076.1|467450_468485_+	DUF5309 family protein	A0A2I7SBK1	Pseudomonas_phage	2.6e-17	30.5
WP_002861675.1|468484_468889_+	hypothetical protein	NA	NA	NA	NA
WP_002799287.1|468869_469064_+	hypothetical protein	NA	NA	NA	NA
WP_171838996.1|470770_471709_+	hypothetical protein	X2KLU0	Campylobacter_phage	7.7e-45	66.2
WP_002924526.1|471710_472160_+	hypothetical protein	X2KXK7	Campylobacter_phage	6.7e-79	98.7
WP_002789149.1|472172_472808_+	DUF4376 domain-containing protein	X2KRD7	Campylobacter_phage	1.3e-96	100.0
WP_002869963.1|472804_473188_+	hypothetical protein	X2KXD5	Campylobacter_phage	2.4e-61	100.0
WP_002865354.1|473180_473555_+	DUF1353 domain-containing protein	X2KPN9	Campylobacter_phage	7.8e-65	93.5
WP_002925120.1|473551_474832_+	hypothetical protein	X2KRN1	Campylobacter_phage	6.5e-212	92.3
WP_002925125.1|474880_475342_+	hypothetical protein	X2KRD2	Campylobacter_phage	4.7e-80	93.5
WP_032600918.1|475347_475767_+	hypothetical protein	X2KX19	Campylobacter_phage	5.9e-45	79.6
WP_002873431.1|475684_475882_+	hypothetical protein	X2KPN2	Campylobacter_phage	1.8e-25	95.4

Sequences of DBSCAN-SWA_3

Nucleotide sequences of DBSCAN-SWA_3

>NC_022529|1386483:1394251|DBSCAN-SWA
TTTAATCAATAAAAATATTTTCTCTACCTAAAGCAAGTATACTAGCAGAAATTTCTGAACGCATCATAAGTTCGCTAGGAATTTTACCCTCGCTTAAATCCTTTCTAATTTGCGTACCACTAATTGCAATTCTATGTTCTTTATAATGTGCACAATTTTTTTCACTCACAATTTTTTGACATTTAGAACAATAATAAGGTTCTTTTAAAAGTAAAAAATCTATACCTAAATCATAACGCATTGATAGATCTTTAGCCAACTTTTGCGCCTCGTAAATTCCGTAATAATCTCCCACTCCCGCATGATCTCTACCAATGATAAAATGGGTACAACCCATATTTCTTCTAAGTAAAGCATGAAAAATAGCTTCTTTAGGACCTGCATAACGCATAGCAGTTTGTAAACCTTGAATATAAACTCTATCTTTAGGATAAAACTCATCAAACATAGTTTTATAAGCACTCATCACTGCTGCTTCAGTAAAATCTCCTTGCTTTTTCCAGCCTGTTAGAGGATTAATAAACAAAGCATCGCAAATTTCAAGCGCAATTCTTTGCAAATGTTCATGAGCTCTGTGGATAGGATTTCTTGTTTGAAAACCCACTATAGTCTTAATATCAGTATCAAAAACATCTTTTAAAATATTTTTATATAAAGAATCTTTATAAAATTCTTCTTTAAGTTCTATTTTTCCACCAACACGCAAAGAAGAGCGTTTTTTTTCTTTTATAAAACCAGGATGTTTTTCATCTTTAGTTTGAAAAATTTCATAAAGATCCCGATCTTGAACGCAAAATTTGTCTTCAATTTGAATATTTCCTATAAATTTGTCTTGATAATATAGATCTTGCTTTTGTCCCACATAAATATCTTTGAAATCATCCACTTCTAAAGTAATAGGCAAGGTCCATATTTCACCATTTAAAAGTTGCATTTCATAAATTACTTTTTTATATTCTTCATAATTCATAAAACCTTCCAAAGGATAAAACACACCACTAGCAAAATATTTTAAATCTAGAAAATTTTCATGAGTAACTTGTAGCATTTATTCACACTTTGAATTATCTAAATTTTGAGAAAGTGCTGTTAAAATAAGGCAAACCTTATCATCAAGTGCTGCCATTTGGGTATTGTCAATCACTAAATCAGCATTTGGTTCATCATACGGAATATCTACACCCACGACATTTGAAATTTCACCCTTTAAAGCTTGAGTATATAAATTCTTTTTATCACGTCTTTTCAACTCTTCAAATTCACATTTTATATAAATTTCAAAATAATTTTTTAAATATTTGCGGTTATACTCATAAATTTCATTCCACATAGAAATCGCACTTACGATAACTATCATTCCTTGATTACTTAAAAAACGAGCAAAATCGGATCGTTTAAAGGATACATCCATGCGACCTTTTTTATCATAGGAAAAACATCCCAAAAGCTCTCTTAACTCATCTCCATCAAGATAGATAACATTGTCATATTTCTCTTTTAATTTTCTATACAATGCTTGTGCTATATAACTTTTACCACTTCCTGCTAAACCTGTAAGCCAAATAGTTAAATTATGTTTCATTACACATCTGCTCAAATTTTTGATAATATTTCCATTGTTTTAAATGCTTTGGATAATTTATTTTTATAAAATTTAATTCTTCATCTAAAATATCTTTTAATTTAAATAGCAAATCTTTTCTCATTTGTAAATATTGCAAAATTTCTTCTTCTGTAATAAGATTGTTTTTAATCTTTATCTCATTCTCTTCAAACGCATCCATATAACCGTTTAAATATTTTTTGCTATCTATAAAATATTTTTGATTATTCTTTAAAATATTATATTCTTTTTGTTTTATTAATAAAATAATATTATCAAACATTAACTTTCTTTCTTTAAAAATTTCAGAAGTAATGTCAATATAGTCTTCATCTGTCATCTTAGGCTCTAAAGAATTAAAATACATAAGATTTTTTGTAGTAATTACTATATTAATACAAATTTCACCTATAACAATAGAATATACAACTGGAAGCACAACCAAATCACCTTGATGGCGATTAATTCTTTTAGAAAAAAAAGAATAATCGCATTTTACATTAAAAAATTTATCAGCTATAAAATCAAATGTTTTTCGAGCATTTAAACCAGAGATTTCATTAAGTTCAAAACACAATACATCTTTTTTTAAAATTTTAATTCTTTGATATGATTTAAAGTAAAGTTCATAATTATCTAAAACTTTTATCAAACTATTCAATTCAGGTTTGCTTGAATTGGAATACCAGTAAAGTATTTCTGGAAAAAGTTCTTTAAAATTTGAATTTAAAGTTATCTGTTTCATCATTGGTTTTATTTTGCTATTTTGGTCGCCTATATGATTTATTGCATGCCTGATAATTGATATTGGATCTCTACATATATATAATAAAGGAACATTGCTAGTAAATAAATAATAAATTTTATCATTATTTTCAAACACTCTTGGAGCTATTGCTACATGTGTTTTTTTGCTTAATATATACGTATAATTATCGATATAAACTTTTTTTTCATCTTCCCAACCATTTGCATTAATAGTTGAAATATCTGAATAATTAAAAAATGTATAAATAGCCATTGTTCCACTACATGCAGCCCATAACCATATTAATTTATAATTTTCAGGCAATGGTAAATTCATTTTCCAAGCTAATTCCCCTGAAATATTATGATAATTTATTTTTTCTGCTTGATCATTAAGTTTTTTAGGGTCAAGTAAAGAAGGATAAGGATGATTTACATCTTGAAATCTTTGCTTAAAATCACTTGATAATAACCATTCTTGTATCATTTCCAAATGATTTAGTGTATAATTAAAATTTTGAAAAATAACTTTTAATACTGGTATATAATTTTTATGCAAGTCTAAGATAATTTTCAAATTATCCAAATTACACATGAATAAATTTTTATTTTCAGCGAGTATAGTATAAATATTTTCTTCAAACTTTTTAGAAAGGTCTAAAATTTCTTTTATTATTTTATAATCTTTTTTGGTTTGTTCTATATTTTTAAAAAGAAAAAAATACCCATCTTTAAACTTATTCACATCAGCTTTGATTAAAACTTCACCTAGCATATAGGACAAATGAAATTTATATCTTAAAGCTTGTTCATAATCACTACATGCTTCTAAACTTGGATATTTGAGTTGAGGAAAAACTTGTATGGTTTGTTGATAAATTTTTTGCTCTTTTTTGTGTTGTTTTTTAATTTTATAAAGTTTTTTAAATAATGCTATATACCCCCCCCATTGTTTGTAAAGTCAATCATAGCTTGACCTAATTTATAAGCTAAATGATTTTTTACTCTTTCTATAGCTGAGTTTGGGTTATACATAGGGTTTTCCTTTAAAAATGGCTTTGGTTGGTTATAAAATTATAATAATCCTCAGGCACGCCAATATCTATAAAATAATTATCAAAAATACAAGCTCTAGCCTTTAGTTTTTTATAATTTTCTTGCAAAAATTCTTCAAAAGAAAATTTTTTCTCTAAATCAAATTCATTAAAAATATCTTTAGTTAAAAGATAAATTCCACCATTGATTAAACCCTGTGTTTTAAATATTTTTTCCTCAAAGGAAATCACAAATCCCTGCTTATCAACATTTACTGTACCATATCTATCAAAATCATTCATTTGCTTTAAAGCAAGGTAAATTTTACCTCCATTTAACTTTAATTTGTTTAAATCTATGTCAAAAAAAGTATCGCCATTTAAAACACAAGCTTCATTTTTTATAAATTTTAAAGCTTCTTTTATAGCTCCACCTGTTCCTAAAGGCTCTTTTTCTATACTATATTTTATTTTTATACCTAAAAACTCATCTTTAAAATATTCTTGTATCACCTCATACTTATATGAAACCGCTAGGATAATCTCCTTTATGCCTTGCCTTTTAAGATACTCAAAAATAAATTCTAAAAAAGGTTTATTATTTATCGGTGCCATAGGCTTTGGAATGTCTTTTATAACGCTTTTAAGCCTTGTTCCTAAGCCGCCACAAAGTATTATTGCTTGCAAGAAAAACCTTTACCGAAAAGCTCTTCTTCGACAATAGCGCAAATAATATGCCCTATCAAAATATGTGCTTCTTGAATTCTTGGTGTGCAAGTTGAAGGTACTTTTATACAATAATCACAAAGTTCATTCATAGCCCCACCATTAGCTCCGCTTAAGCCTATACTTATGATTTCTTTTTGCTTACAAAGTTCTAGAGCCTTTAGGATATTTTTACTATTTCCGCTTGTAGAAATTCCTATAAAAACATCTCCCTTAACACCTTGAGCTTGCACTTGTCTAGCAAACAAATTTTCATAACCATAATCATTGCCAATAGCTGTTAAAATACTTGTATCTGTAGTAAGTGCAATACTTGCGATCCCTGGTCTATCAAAATAAAATCTACTTACAAATTCCCCTGCGATGTGCTGTGCATCTGCTGCACTACCACCGTTTCCTGCAAGCAAGGTTTTATTGCCATTTTTGTAAGCTTTTATGACTTCTAATGAAGCATTTTTAATAAGAGTTATCAAATTCTCATCTTTTAAAATTTGCTCTTTTACTAAAATAGAATCTGTAAAATGTCCTTTTATATAGGAATTTAAATTCTCCATGATTTAACCCCCTCTTTTGTAAATGAAAAATCTTGCACCCAGCCTTGTTCTTTGTTTAAAGCTTTAATTAAATTGTATTTTTTAGTAGGATCTACAAAGAAAAACATAAATCCACCAGCTCCTGCTCCACTGGTTTTACCACTGTAAGCTCCATTATCTATAGCAAGTTTATAAATTCTTTCAAGCTCATCGTTGCTAACGATTTCTGAAATGATTTTTTTTGACTGCCAAGACTTACCTAAAATTTGCGCCAAAGTATCAAAATCCGCCTTAAATAAAGCTTCTTTCATCTTTATAGCATCTTGCTTTATGGCATGCATGGCCTCAAGGGATTTTTCATCTCCAAGTTTTCCTTTTTTATGCTCTTCTATATCTTTTGCTTCTCTTGTGATATTTGTAAAATAAAGCACAGTTCTAGCTTCAAGCTCACTAGCTATCCAGTTTTTAATACGCAAAGGATTGACAATGACTCTTTTATTATCATAAAATTCCATAAAATTAAAGCCACCAAAAGTTGCGGCGTATTGATCTTGTGCTCCGCCTACTATGCCTAAATCTTCTCTTTCTATCTCATAAGCAAGTTTAGCGATTTCATATTCCCCTAAAGGTAAATTAAGCCATTCTGCAAAAGCTTTTATAACCCCTACAACCAAAGTCGAGCTTCCACCCAAGCCACTACCACTTGGTACATCTGAGTATGTATGCAAAGAAAAACTCAAAGGTTTTTTTGTAAAATCTTTTATAATGCGATTATAAATACTTTTAAAAATATCTAATTTTCCATCATTTTCTAAATGCTCTTTGCTTTCGTACTCACAGTAAGAATTTGTATCAGGAGAATCAAAAATGATTTTTCCATCTTCTCTTTCGATCAAAGTACAATGTATGTATAAAGATATAGTCACATTTAAAACATAACCTGTGTATTTATCACAATATAAATTTATATCAGTTCCCCCACCTGCTAGACCGAGACGAAGAGGAGTTTGTGTGCGTATGGTTTTCATCTATTTAAAGGAATCCTTCCTTTTTTTATCTCATCTCTCCAATGATTTAATAGATCCTCAAACATTTGTCTAGCTGGAATTTCTGGCTTCCAGTCAATAAAACTTTTGATTTTTGTGTTGTCAAACATTTGATAGTCTGCATCAATAGGACGTAGTCTTTCTTCATCTTGTTCTACTTTAATATCTTTTCTTGTAGAAAAACCTAAAAGTATATCAATAACCTCAGGGAGTTTAAAAACTTCTTCTCCTGCTATATTAAAAGCTTCCCCACAAGGAACTTTTCCTTTTTCACTTTCAAGAGAAAGTAGATAATAAGCCCTTATAGCATCTCTGGCATCTTGAAAGGTTCTTACACTCGAAAGATTTCCAACCTTGATAACAGGCTCTTGATAACCCGCTTCAATCAAAGCAATTTGCTTTGCAACTGTACTTTCAAAAAAAACATCGGAACGTCTCGGGCCACTATGTGTTCCCATTCTTGTAACAAAAGTGCGAATGTTATAAGCTTCGCCATAAAATCTTCCTAAATAATCGGTGCCGATTTTGCTTATACTATAAGGACTTGCACCGTGAAAAGCCGTATCTTCATTTAACTTAACTTCTGCCTTTGCCCTACCATAAACTTCACTTGAAGAGCAAATATGCACTATAGGATCATAACCATCTTTTGCCTTTAAAATTCTAATATTTTCCAAAATATTTGCTGTTCCTATTATGTTAGTCTGTAAAGTTTCAATCGGTATATTAAAAGAAGTTTTTGGATAAGACTGAGCTGCTAAGTGAAAAATCACATCAGGCCTTTGACTCTCGAAAAGTTTTTGAAGACTAGAGTAATCATTTAAATCTGCATAAAAAATACTGATTCTATCTTTTTTATTTATCCTGTCACTTAAATGATAGATATTATCCATAGGTTCTTGCCAACGCATCATACCTATAACATCATAGTCTGTGTTTTCTAGCAAGAAATCTGCCATTTGAGATCCAACTTGCCCTGTAAAACCTGTAATTAATGCTGTTTTTTTCATAATTTTTTTTCCTACTGTCTTATATTTTGCTCTTTTAAATACCATTTATACATCATTTTAATGCCATCTTCAAGTTCAATTTTATGTTTCCAGCCTAAAGAATGAATTTTTGAGCAATCTGTAAATTTCTGCATTGCCCCATCTGGACGATTTGAATTAAAAACTAATTTTCCCTTAAATCCTACTATATTTTTGATTAATTCTGCTAATTCTTTGATAGTGATATTCTTATGCGGACCTATATTTAAATGAGTATTAATAATCTCAGTATTATCACCTTTTAAATCTTTAAAATCTATATTATTCATGATAAATAAACAAGCATTTGCTAAATCTTGACTATGTAAAAATTCTCTTGTAGGCTTTCCACTACCCCAAATTTCAACATTATTCTCATCTACACCAAATTTTTTTAAATAATTCTTAGCTTCTTCAATGGAATCAAATTTTAAATCATTTAATAAGTCCTCGTATCGCTTTTCATTTAAAAGCTTGGCTAAATGCATTTTTCTTAAAATTCCAGACAATACATGAGATTTTTCAAGATCAAATTTATCATTATTGCCATATAAATTTGTAGGAGTGATTGCTATAAAATTTGTATTGTATTGCAAATTATAACTTTCACAAAGCATCAAGCCTGAAATTTTAGCGATTGCGTAAGGTTTGTTAGTATACTCAAGATCTCCACTTAACATTTGCTCTTCACTAGTTGGCAATGTTGCATTTTTAGGATAAACCGTAGTTGAAGCTATGAAAAGTAGCTTTTTTACTTTATGTAAATAAGCATTATGAATAACATTGCACTCTATCATTAAATTTTGATAAATAAAATCAGCACGATAAGTATTATTAGCTAGAATTCCACCCGCTTTAGCTGCTGCTAAAATAACATACTCTGGCTTTTCTCTCTCAAAAAAATCAGCCACAGCTTTTTGATTTGTTAAATCGAGCTCAAAGTGAGTTTTAAAAACAAGATTTTTATAACCTTGTTGCTTAAGTTCATTAAGTATAGCACTACCAACAAGACCACTATGACCCGCTATATAAATTTTAGAATCTTTTTGCAT

Protein sequences of DBSCAN-SWA_3

>NC_022529|1386483:1394251|1389765_1389867_-|WP_032598164.1|DBSCAN-SWA
MYNPNSAIERVKNHLAYKLGQAMIDFTNNGGGI
>NC_022529|1386483:1394251|1387530_1388064_-|WP_022552402.1|DBSCAN-SWA
MKHNLTIWLTGLAGSGKSYIAQALYRKLKEKYDNVIYLDGDELRELLGCFSYDKKGRMDVSFKRSDFARFLSNQGMIVIVSAISMWNEIYEYNRKYLKNYFEIYIKCEFEELKRRDKKNLYTQALKGEISNVVGVDIPYDEPNADLVIDNTQMAALDDKVCLILTALSQNLDNSKCE
>NC_022529|1386483:1394251|1393192_1394251_-|WP_022552408.1|DBSCAN-SWA
MQKDSKIYIAGHSGLVGSAILNELKQQGYKNLVFKTHFELDLTNQKAVADFFEREKPEYVILAAAKAGGILANNTYRADFIYQNLMIECNVIHNAYLHKVKKLLFIASTTVYPKNATLPTSEEQMLSGDLEYTNKPYAIAKISGLMLCESYNLQYNTNFIAITPTNLYGNNDKFDLEKSHVLSGILRKMHLAKLLNEKRYEDLLNDLKFDSIEEAKNYLKKFGVDENNVEIWGSGKPTREFLHSQDLANACLFIMNNIDFKDLKGDNTEIINTHLNIGPHKNITIKELAELIKNIVGFKGKLVFNSNRPDGAMQKFTDCSKIHSLGWKHKIELEDGIKMMYKWYLKEQNIRQ
>NC_022529|1386483:1394251|1388053_1389409_-|WP_172635438.1|DBSCAN-SWA
MKIILDLHKNYIPVLKVIFQNFNYTLNHLEMIQEWLLSSDFKQRFQDVNHPYPSLLDPKKLNDQAEKINYHNISGELAWKMNLPLPENYKLIWLWAACSGTMAIYTFFNYSDISTINANGWEDEKKVYIDNYTYILSKKTHVAIAPRVFENNDKIYYLFTSNVPLLYICRDPISIIRHAINHIGDQNSKIKPMMKQITLNSNFKELFPEILYWYSNSSKPELNSLIKVLDNYELYFKSYQRIKILKKDVLCFELNEISGLNARKTFDFIADKFFNVKCDYSFFSKRINRHQGDLVVLPVVYSIVIGEICINIVITTKNLMYFNSLEPKMTDEDYIDITSEIFKERKLMFDNIILLIKQKEYNILKNNQKYFIDSKKYLNGYMDAFEENEIKIKNNLITEEEILQYLQMRKDLLFKLKDILDEELNFIKINYPKHLKQWKYYQKFEQMCNET
>NC_022529|1386483:1394251|1392149_1393181_-|WP_022552407.1|DBSCAN-SWA
MKKTALITGFTGQVGSQMADFLLENTDYDVIGMMRWQEPMDNIYHLSDRINKKDRISIFYADLNDYSSLQKLFESQRPDVIFHLAAQSYPKTSFNIPIETLQTNIIGTANILENIRILKAKDGYDPIVHICSSSEVYGRAKAEVKLNEDTAFHGASPYSISKIGTDYLGRFYGEAYNIRTFVTRMGTHSGPRRSDVFFESTVAKQIALIEAGYQEPVIKVGNLSSVRTFQDARDAIRAYYLLSLESEKGKVPCGEAFNIAGEEVFKLPEVIDILLGFSTRKDIKVEQDEERLRPIDADYQMFDNTKIKSFIDWKPEIPARQMFEDLLNHWRDEIKKGRIPLNR
>NC_022529|1386483:1394251|1391133_1392153_-|WP_022552406.1|DBSCAN-SWA
MKTIRTQTPLRLGLAGGGTDINLYCDKYTGYVLNVTISLYIHCTLIEREDGKIIFDSPDTNSYCEYESKEHLENDGKLDIFKSIYNRIIKDFTKKPLSFSLHTYSDVPSGSGLGGSSTLVVGVIKAFAEWLNLPLGEYEIAKLAYEIEREDLGIVGGAQDQYAATFGGFNFMEFYDNKRVIVNPLRIKNWIASELEARTVLYFTNITREAKDIEEHKKGKLGDEKSLEAMHAIKQDAIKMKEALFKADFDTLAQILGKSWQSKKIISEIVSNDELERIYKLAIDNGAYSGKTSGAGAGGFMFFFVDPTKKYNLIKALNKEQGWVQDFSFTKEGVKSWRI
>NC_022529|1386483:1394251|1386483_1387530_-|WP_022552401.1|DBSCAN-SWA
MLQVTHENFLDLKYFASGVFYPLEGFMNYEEYKKVIYEMQLLNGEIWTLPITLEVDDFKDIYVGQKQDLYYQDKFIGNIQIEDKFCVQDRDLYEIFQTKDEKHPGFIKEKKRSSLRVGGKIELKEEFYKDSLYKNILKDVFDTDIKTIVGFQTRNPIHRAHEHLQRIALEICDALFINPLTGWKKQGDFTEAAVMSAYKTMFDEFYPKDRVYIQGLQTAMRYAGPKEAIFHALLRRNMGCTHFIIGRDHAGVGDYYGIYEAQKLAKDLSMRYDLGIDFLLLKEPYYCSKCQKIVSEKNCAHYKEHRIAISGTQIRKDLSEGKIPSELMMRSEISASILALGRENIFID
>NC_022529|1386483:1394251|1390540_1391146_-|WP_022552405.1|DBSCAN-SWA
MENLNSYIKGHFTDSILVKEQILKDENLITLIKNASLEVIKAYKNGNKTLLAGNGGSAADAQHIAGEFVSRFYFDRPGIASIALTTDTSILTAIGNDYGYENLFARQVQAQGVKGDVFIGISTSGNSKNILKALELCKQKEIISIGLSGANGGAMNELCDYCIKVPSTCTPRIQEAHILIGHIICAIVEEELFGKGFSCKQ
>NC_022529|1386483:1394251|1389878_1390553_-|WP_022552404.1|DBSCAN-SWA
MQAIILCGGLGTRLKSVIKDIPKPMAPINNKPFLEFIFEYLKRQGIKEIILAVSYKYEVIQEYFKDEFLGIKIKYSIEKEPLGTGGAIKEALKFIKNEACVLNGDTFFDIDLNKLKLNGGKIYLALKQMNDFDRYGTVNVDKQGFVISFEEKIFKTQGLINGGIYLLTKDIFNEFDLEKKFSFEEFLQENYKKLKARACIFDNYFIDIGVPEDYYNFITNQSHF

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_022552401.1|1386483_1387530_-	sulfate adenylyltransferase	A0A2K9L4R9	Tupanvirus	1.7e-24	29.8
WP_022552402.1|1387530_1388064_-	adenylyl-sulfate kinase	NA	NA	NA	NA
WP_172635438.1|1388053_1389409_-	DUF2972 domain-containing protein	NA	NA	NA	NA
WP_032598164.1|1389765_1389867_-	hypothetical protein	NA	NA	NA	NA
WP_022552404.1|1389878_1390553_-	NTP transferase domain-containing protein	A0A2K9L821	Tupanvirus	6.0e-07	26.1
WP_022552405.1|1390540_1391146_-	D-sedoheptulose 7-phosphate isomerase	A0A067XQR2	Caulobacter_phage	3.7e-16	35.0
WP_022552406.1|1391133_1392153_-	D-glycero-D-manno-heptose 7-phosphate kinase	A0A222YW25	Synechococcus_phage	4.6e-59	40.5
WP_022552407.1|1392149_1393181_-	GDP-mannose 4,6-dehydratase	A0A222YY99	Synechococcus_phage	3.8e-146	73.0
WP_022552408.1|1393192_1394251_-	GDP-L-fucose synthase	M1HWW2	Paramecium_bursaria_Chlorella_virus	1.6e-78	43.6