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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NC_022781 Bacillus toyonensis BCT-7112, complete sequence 2 crisprs csa3,WYL,DEDDh,cas3,DinG,c2c9_V-U4 0 2 5 0
NC_022782 Bacillus toyonensis BCT-7112 plasmid pBCT77, complete sequence 0 crisprs NA 0 0 0 0
NC_022783 Bacillus toyonensis BCT-7112 plasmid pBCT8, complete sequence 0 crisprs NA 0 0 0 0

Results visualization

1. NC_022781
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_022781_1 2410128-2410261 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_022781_2 3627406-3627481 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NC_022781_1 1.1|2410151|31|NC_022781|CRISPRCasFinder 2410151-2410181 31 MH572303 Microviridae sp. isolate SD_SC_50, complete genome 235-265 7 0.774
NC_022781_1 1.2|2410205|34|NC_022781|CRISPRCasFinder 2410205-2410238 34 NZ_CP014851 Bacillus thuringiensis strain HD12 plasmid pHD120112, complete sequence 100650-100683 8 0.765
NC_022781_1 1.2|2410205|34|NC_022781|CRISPRCasFinder 2410205-2410238 34 MT811961 Vibrio phage vB_pir03, complete genome 153057-153090 10 0.706
NC_022781_1 1.2|2410205|34|NC_022781|CRISPRCasFinder 2410205-2410238 34 MN812210 Flavobacterium phage vB_FspS_hemulen9-1, complete genome 22854-22887 10 0.706
NC_022781_1 1.2|2410205|34|NC_022781|CRISPRCasFinder 2410205-2410238 34 MN812215 Flavobacterium phage vB_FspS_lillamy9-4, complete genome 22191-22224 10 0.706
NC_022781_1 1.2|2410205|34|NC_022781|CRISPRCasFinder 2410205-2410238 34 MN812216 Flavobacterium phage vB_FspS_lillamy9-5, complete genome 22191-22224 10 0.706
NC_022781_1 1.2|2410205|34|NC_022781|CRISPRCasFinder 2410205-2410238 34 NC_048835 Flavobacterium phage vB_FspS_lillamy9-1, complete genome 22191-22224 10 0.706
NC_022781_1 1.2|2410205|34|NC_022781|CRISPRCasFinder 2410205-2410238 34 MN812213 Flavobacterium phage vB_FspS_lillamy9-2, complete genome 22191-22224 10 0.706
NC_022781_1 1.2|2410205|34|NC_022781|CRISPRCasFinder 2410205-2410238 34 MN812230 Flavobacterium phage vB_FspS_sniff9-2, complete genome 21831-21864 10 0.706
NC_022781_1 1.2|2410205|34|NC_022781|CRISPRCasFinder 2410205-2410238 34 MN812209 Flavobacterium phage vB_FspS_hemulen6-2, complete genome 22983-23016 10 0.706
NC_022781_1 1.2|2410205|34|NC_022781|CRISPRCasFinder 2410205-2410238 34 MN812218 Flavobacterium phage vB_FspS_lillamy9-7, complete genome 21454-21487 10 0.706
NC_022781_1 1.2|2410205|34|NC_022781|CRISPRCasFinder 2410205-2410238 34 MN812233 Flavobacterium phage vB_FspS_snork9-1, complete genome 22007-22040 10 0.706
NC_022781_1 1.2|2410205|34|NC_022781|CRISPRCasFinder 2410205-2410238 34 MN812219 Flavobacterium phage vB_FspS_morran9-1, complete genome 22308-22341 10 0.706
NC_022781_1 1.2|2410205|34|NC_022781|CRISPRCasFinder 2410205-2410238 34 MN812217 Flavobacterium phage vB_FspS_lillamy9-6, complete genome 21930-21963 10 0.706
NC_022781_1 1.2|2410205|34|NC_022781|CRISPRCasFinder 2410205-2410238 34 NC_048840 Flavobacterium phage vB_FspS_snork6-1, complete genome 22137-22170 10 0.706
NC_022781_1 1.2|2410205|34|NC_022781|CRISPRCasFinder 2410205-2410238 34 NC_048839 Flavobacterium phage vB_FspS_sniff9-1, complete genome 22057-22090 10 0.706
NC_022781_1 1.2|2410205|34|NC_022781|CRISPRCasFinder 2410205-2410238 34 NC_048842 Flavobacterium phage vB_FspS_stinky9-1, complete genome 21673-21706 10 0.706
NC_022781_1 1.2|2410205|34|NC_022781|CRISPRCasFinder 2410205-2410238 34 MN812232 Flavobacterium phage vB_FspS_snork6-2, complete genome 21655-21688 10 0.706
NC_022781_1 1.2|2410205|34|NC_022781|CRISPRCasFinder 2410205-2410238 34 MN812208 Flavobacterium phage vB_FspS_hemulen6-1, complete genome 22983-23016 10 0.706

1. spacer 1.1|2410151|31|NC_022781|CRISPRCasFinder matches to MH572303 (Microviridae sp. isolate SD_SC_50, complete genome) position: , mismatch: 7, identity: 0.774

ttcttcttttttgtcaccagtcgaaccgctt	CRISPR spacer
ttcttcttttttgtccccaatcgtctagttt	Protospacer
*************** ***.***  . *.**

2. spacer 1.2|2410205|34|NC_022781|CRISPRCasFinder matches to NZ_CP014851 (Bacillus thuringiensis strain HD12 plasmid pHD120112, complete sequence) position: , mismatch: 8, identity: 0.765

cttatcttctgttttactttctggtttcgtgctc	CRISPR spacer
tttatcttcttttttattttctggtttattttcc	Protospacer
.********* *****.**********  * ..*

3. spacer 1.2|2410205|34|NC_022781|CRISPRCasFinder matches to MT811961 (Vibrio phage vB_pir03, complete genome) position: , mismatch: 10, identity: 0.706

cttatcttctgttttactttctggtttcgtgctc	CRISPR spacer
tttatcttctgttttagtttgtggttgaattagt	Protospacer
.*************** *** *****  .*   .

4. spacer 1.2|2410205|34|NC_022781|CRISPRCasFinder matches to MN812210 (Flavobacterium phage vB_FspS_hemulen9-1, complete genome) position: , mismatch: 10, identity: 0.706

cttatcttctgttttactttctggtttcgtgctc	CRISPR spacer
ttcggcttctgttttattttctggttgcgatatt	Protospacer
.*.. ***********.********* **   *.

5. spacer 1.2|2410205|34|NC_022781|CRISPRCasFinder matches to MN812215 (Flavobacterium phage vB_FspS_lillamy9-4, complete genome) position: , mismatch: 10, identity: 0.706

cttatcttctgttttactttctggtttcgtgctc	CRISPR spacer
ttcggcttctgttttattttctggttgcgatatt	Protospacer
.*.. ***********.********* **   *.

6. spacer 1.2|2410205|34|NC_022781|CRISPRCasFinder matches to MN812216 (Flavobacterium phage vB_FspS_lillamy9-5, complete genome) position: , mismatch: 10, identity: 0.706

cttatcttctgttttactttctggtttcgtgctc	CRISPR spacer
ttcggcttctgttttattttctggttgcgatatt	Protospacer
.*.. ***********.********* **   *.

7. spacer 1.2|2410205|34|NC_022781|CRISPRCasFinder matches to NC_048835 (Flavobacterium phage vB_FspS_lillamy9-1, complete genome) position: , mismatch: 10, identity: 0.706

cttatcttctgttttactttctggtttcgtgctc	CRISPR spacer
ttcggcttctgttttattttctggttgcgatatt	Protospacer
.*.. ***********.********* **   *.

8. spacer 1.2|2410205|34|NC_022781|CRISPRCasFinder matches to MN812213 (Flavobacterium phage vB_FspS_lillamy9-2, complete genome) position: , mismatch: 10, identity: 0.706

cttatcttctgttttactttctggtttcgtgctc	CRISPR spacer
ttcggcttctgttttattttctggttgcgatatt	Protospacer
.*.. ***********.********* **   *.

9. spacer 1.2|2410205|34|NC_022781|CRISPRCasFinder matches to MN812230 (Flavobacterium phage vB_FspS_sniff9-2, complete genome) position: , mismatch: 10, identity: 0.706

cttatcttctgttttactttctggtttcgtgctc	CRISPR spacer
ttcggcttctgttttattttctggttgcgatatt	Protospacer
.*.. ***********.********* **   *.

10. spacer 1.2|2410205|34|NC_022781|CRISPRCasFinder matches to MN812209 (Flavobacterium phage vB_FspS_hemulen6-2, complete genome) position: , mismatch: 10, identity: 0.706

cttatcttctgttttactttctggtttcgtgctc	CRISPR spacer
ttcggcttctgttttattttctggttgcgatatt	Protospacer
.*.. ***********.********* **   *.

11. spacer 1.2|2410205|34|NC_022781|CRISPRCasFinder matches to MN812218 (Flavobacterium phage vB_FspS_lillamy9-7, complete genome) position: , mismatch: 10, identity: 0.706

cttatcttctgttttactttctggtttcgtgctc	CRISPR spacer
ttcggcttctgttttattttctggttgcgatatt	Protospacer
.*.. ***********.********* **   *.

12. spacer 1.2|2410205|34|NC_022781|CRISPRCasFinder matches to MN812233 (Flavobacterium phage vB_FspS_snork9-1, complete genome) position: , mismatch: 10, identity: 0.706

cttatcttctgttttactttctggtttcgtgctc	CRISPR spacer
ttcggcttctgttttattttctggttgcgatatt	Protospacer
.*.. ***********.********* **   *.

13. spacer 1.2|2410205|34|NC_022781|CRISPRCasFinder matches to MN812219 (Flavobacterium phage vB_FspS_morran9-1, complete genome) position: , mismatch: 10, identity: 0.706

cttatcttctgttttactttctggtttcgtgctc	CRISPR spacer
ttcggcttctgttttattttctggttgcgatatt	Protospacer
.*.. ***********.********* **   *.

14. spacer 1.2|2410205|34|NC_022781|CRISPRCasFinder matches to MN812217 (Flavobacterium phage vB_FspS_lillamy9-6, complete genome) position: , mismatch: 10, identity: 0.706

cttatcttctgttttactttctggtttcgtgctc	CRISPR spacer
ttcggcttctgttttattttctggttgcgatatt	Protospacer
.*.. ***********.********* **   *.

15. spacer 1.2|2410205|34|NC_022781|CRISPRCasFinder matches to NC_048840 (Flavobacterium phage vB_FspS_snork6-1, complete genome) position: , mismatch: 10, identity: 0.706

cttatcttctgttttactttctggtttcgtgctc	CRISPR spacer
ttcggcttctgttttattttctggttgcgatatt	Protospacer
.*.. ***********.********* **   *.

16. spacer 1.2|2410205|34|NC_022781|CRISPRCasFinder matches to NC_048839 (Flavobacterium phage vB_FspS_sniff9-1, complete genome) position: , mismatch: 10, identity: 0.706

cttatcttctgttttactttctggtttcgtgctc	CRISPR spacer
ttcggcttctgttttattttctggttgcgatatt	Protospacer
.*.. ***********.********* **   *.

17. spacer 1.2|2410205|34|NC_022781|CRISPRCasFinder matches to NC_048842 (Flavobacterium phage vB_FspS_stinky9-1, complete genome) position: , mismatch: 10, identity: 0.706

cttatcttctgttttactttctggtttcgtgctc	CRISPR spacer
ttcggcttctgttttattttctggttgcgatatt	Protospacer
.*.. ***********.********* **   *.

18. spacer 1.2|2410205|34|NC_022781|CRISPRCasFinder matches to MN812232 (Flavobacterium phage vB_FspS_snork6-2, complete genome) position: , mismatch: 10, identity: 0.706

cttatcttctgttttactttctggtttcgtgctc	CRISPR spacer
ttcggcttctgttttattttctggttgcgatatt	Protospacer
.*.. ***********.********* **   *.

19. spacer 1.2|2410205|34|NC_022781|CRISPRCasFinder matches to MN812208 (Flavobacterium phage vB_FspS_hemulen6-1, complete genome) position: , mismatch: 10, identity: 0.706

cttatcttctgttttactttctggtttcgtgctc	CRISPR spacer
ttcggcttctgttttattttctggttgcgatatt	Protospacer
.*.. ***********.********* **   *.

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 913545 : 921372 9 Bacillus_phage(55.56%) bacteriocin NA
DBSCAN-SWA_2 1738049 : 1745721 10 Staphylococcus_phage(16.67%) NA NA
DBSCAN-SWA_3 2920456 : 2928831 8 Synechococcus_phage(50.0%) NA NA
DBSCAN-SWA_4 4460288 : 4469000 8 Bacillus_phage(71.43%) NA NA
DBSCAN-SWA_5 4659406 : 4685895 35 Bacillus_phage(43.48%) integrase,terminase,capsid,portal attL 4652887:4652908|attR 4675917:4675938
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage