CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NC_023019	Pseudomonas aeruginosa MTB-1, complete sequence	2 crisprs	csa3,DEDDh,cas3,WYL,RT,DinG	0	0	7	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NC_023019_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_023019_1

343216-343329

Orphan

Consensus_repeat	Method
GGCCAAAGAACTGGAGGGCAAGGTATGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_023019_1

>merge|NC_023019|1|343216-343329|CRISPRCasFinder
GGCCAAAGAACTGGAGGGCAAGGTATGAGCCAGCACAGCGTATCCCGCTCCGTATCCCGTTCAACAGGCTCTCCATCCAGAAGCGTGGCCAAAGAACTGGAGGGCAAGGTATGA

>NC_023019|1|1|343216-343329|CRISPRCasFinder
GGCCAAAGAACTGGAGGGCAAGGTATGA	GCCAGCACAGCGTATCCCGCTCCGTATCCCGTTCAACAGGCTCTCCATCCAGAAGCGT
GGCCAAAGAACTGGAGGGCAAGGTATGA

Protein	Signature genes	Signature genes Name	Protein_function
NC_023019.1\|WP_003084297.1\|337020_338391_+\|aspartate-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|180994
NC_023019.1\|WP_003112941.1\|346870_347923_+\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|378890
NC_023019.1\|WP_023874817.1\|334803_335556_+\|gamma-glutamyl-gamma-aminobutyrate-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|336781
NC_023019.1\|WP_003084339.1\|352998_353691_-\|amino-acid-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223836
NC_023019.1\|WP_003084290.1\|335596_336955_+\|glutamine-synthetase	unknown	unknown	gnl\|CDD\|223252
NC_023019.1\|WP_003111119.1\|330064_330943_-\|N-carbamoylputrescine-amidase	unknown	unknown	gnl\|CDD\|274553
NC_023019.1\|WP_023874820.1\|349119_350139_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|225176
NC_023019.1\|WP_003084303.1\|341180_342335_+\|polyamine-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|183226
NC_023019.1\|WP_003084327.1\|351679_352234_-\|hypothetical-protein	unknown	unknown	unknown
NC_023019.1\|WP_003084299.1\|338506_339610_+\|polyamine-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270377
NC_023019.1\|WP_003084333.1\|352499_352994_+\|DUF523-domain-containing-protein	unknown	unknown	gnl\|CDD\|224597
NC_023019.1\|WP_003128868.1\|350959_351658_+\|2OG-Fe(II)-oxygenase	unknown	unknown	gnl\|CDD\|226274
NC_023019.1\|WP_003084301.1\|340028_341126_+\|polyamine-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270377
NC_023019.1\|WP_003084320.1\|350158_350911_-\|hypothetical-protein	unknown	unknown	unknown
NC_023019.1\|WP_023874819.1\|347901_348405_-\|hypothetical-protein	unknown	unknown	unknown
NC_023019.1\|WP_016263947.1\|333148_334525_-\|glutamine-synthetase	unknown	unknown	gnl\|CDD\|223252
NC_023019.1\|WP_003118762.1\|348509_349121_-\|thiol-disulfide-isomerase	unknown	unknown	gnl\|CDD\|239267
NC_023019.1\|WP_023874818.1\|344372_346760_-\|penicillin-acylase-family-protein	unknown	unknown	gnl\|CDD\|225241
NC_023019.1\|WP_003128566.1\|331105_331771_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NC_023019.1\|WP_022580768.1\|331831_332893_-\|polyamine-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270377

Protein	Function_ID	Function_description	E-value
NC_023019.1\|WP_003084297.1\|337020_338391_+\|aspartate-aminotransferase-family-protein	gnl\|CDD\|180994	PRK07480, PRK07480, putative aminotransferase; Validated.	0
NC_023019.1\|WP_003112941.1\|346870_347923_+\|AraC-family-transcriptional-regulator	gnl\|CDD\|378890	pfam12625, Arabinose_bd, Arabinose-binding domain of AraC transcription regulator, N-term. AraC is a bacterial transcriptional regulatory protein with a DNA-binding domain at the C-terminus, HTH_AraC, pfam00165, and this dimerization domain which harbours the arabinose-binding pocket at the N-terminus. AraC positively and negatively regulates expression of the proteins required for the uptake and catabolism of the sugar L-arabinose 1,2,3].	2.54039e-32
NC_023019.1\|WP_023874817.1\|334803_335556_+\|gamma-glutamyl-gamma-aminobutyrate-hydrolase-family-protein	gnl\|CDD\|336781	pfam07722, Peptidase_C26, Peptidase C26. These peptidases have gamma-glutamyl hydrolase activity; that is they catalyze the cleavage of the gamma-glutamyl bond in poly-gamma-glutamyl substrates. They are structurally related to pfam00117, but contain extensions in four loops and at the C-terminus.	7.14771e-109
NC_023019.1\|WP_003084339.1\|352998_353691_-\|amino-acid-ABC-transporter-permease	gnl\|CDD\|223836	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism].	3.29364e-79
NC_023019.1\|WP_003084290.1\|335596_336955_+\|glutamine-synthetase	gnl\|CDD\|223252	COG0174, GlnA, Glutamine synthetase [Amino acid transport and metabolism].	5.71424e-158
NC_023019.1\|WP_003111119.1\|330064_330943_-\|N-carbamoylputrescine-amidase	gnl\|CDD\|274553	TIGR03381, putative_carbon-nitrogen_hydrolase, N-carbamoylputrescine amidase. Members of this family are N-carbamoylputrescine amidase (3.5.1.53). Bacterial genes are designated AguB. The AguAB pathway replaces SpeB for conversion of agmatine to putrescine in two steps rather than one. [Central intermediary metabolism, Polyamine biosynthesis].	0
NC_023019.1\|WP_023874820.1\|349119_350139_+\|alpha/beta-hydrolase	gnl\|CDD\|225176	COG2267, PldB, Lysophospholipase [Lipid metabolism].	1.05149e-55
NC_023019.1\|WP_003084303.1\|341180_342335_+\|polyamine-ABC-transporter-ATP-binding-protein	gnl\|CDD\|183226	PRK11607, potG, putrescine ABC transporter ATP-binding subunit PotG.	0
NC_023019.1\|WP_003084299.1\|338506_339610_+\|polyamine-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270377	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold. This group represents the periplasmic substrate-binding domain that serves as the primary polyamine receptor of ABC-type putrescine-preferential transporter from gram-negative bacteria. Polyamine transport plays an essential role in the regulation of intracellular polyamine levels which are known to be elevated in rapidly proliferating cells and tumors. Natural polyamines are putrescine, spermindine, and spermine. They are polycations that play multiple roles in cell growth, survival and proliferation, and plant stress and disease resistance. They can interact with negatively charged molecules, such as nucleic acids, to modulate their functions. Members of this family belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	0
NC_023019.1\|WP_003084333.1\|352499_352994_+\|DUF523-domain-containing-protein	gnl\|CDD\|224597	COG1683, COG1683, Uncharacterized conserved protein [Function unknown].	1.65548e-66
NC_023019.1\|WP_003128868.1\|350959_351658_+\|2OG-Fe(II)-oxygenase	gnl\|CDD\|226274	COG3751, EGL-9, Predicted proline hydroxylase [Posttranslational modification, protein turnover, chaperones].	9.10189e-78
NC_023019.1\|WP_003084301.1\|340028_341126_+\|polyamine-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270377	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold. This group represents the periplasmic substrate-binding domain that serves as the primary polyamine receptor of ABC-type putrescine-preferential transporter from gram-negative bacteria. Polyamine transport plays an essential role in the regulation of intracellular polyamine levels which are known to be elevated in rapidly proliferating cells and tumors. Natural polyamines are putrescine, spermindine, and spermine. They are polycations that play multiple roles in cell growth, survival and proliferation, and plant stress and disease resistance. They can interact with negatively charged molecules, such as nucleic acids, to modulate their functions. Members of this family belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	0
NC_023019.1\|WP_016263947.1\|333148_334525_-\|glutamine-synthetase	gnl\|CDD\|223252	COG0174, GlnA, Glutamine synthetase [Amino acid transport and metabolism].	3.44066e-161
NC_023019.1\|WP_003118762.1\|348509_349121_-\|thiol-disulfide-isomerase	gnl\|CDD\|239267	cd02969, PRX_like1, Peroxiredoxin (PRX)-like 1 family; hypothetical proteins that show sequence similarity to PRXs. Members of this group contain a conserved cysteine that aligns to the first cysteine in the CXXC motif of TRX. This does not correspond to the peroxidatic cysteine found in PRXs, which aligns to the second cysteine in the CXXC motif of TRX. In addition, these proteins do not contain the other two conserved residues of the catalytic triad of PRX. PRXs confer a protective antioxidant role in cells through their peroxidase activity in which hydrogen peroxide, peroxynitrate, and organic hydroperoxides are reduced and detoxified using reducing equivalents derived from either thioredoxin, glutathione, trypanothione and AhpF.	0.00342131
NC_023019.1\|WP_023874818.1\|344372_346760_-\|penicillin-acylase-family-protein	gnl\|CDD\|225241	COG2366, COG2366, Protein related to penicillin acylase [General function prediction only].	0
NC_023019.1\|WP_003128566.1\|331105_331771_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	6.54006e-09
NC_023019.1\|WP_022580768.1\|331831_332893_-\|polyamine-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270377	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold. This group represents the periplasmic substrate-binding domain that serves as the primary polyamine receptor of ABC-type putrescine-preferential transporter from gram-negative bacteria. Polyamine transport plays an essential role in the regulation of intracellular polyamine levels which are known to be elevated in rapidly proliferating cells and tumors. Natural polyamines are putrescine, spermindine, and spermine. They are polycations that play multiple roles in cell growth, survival and proliferation, and plant stress and disease resistance. They can interact with negatively charged molecules, such as nucleic acids, to modulate their functions. Members of this family belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	1.46459e-163

>NC_023019.1|WP_003084303.1|341180_342335_+|polyamine-ABC-transporter-ATP-binding-protein
MAIASGAYKKALEGNQQPKEVLVKIDRVTKQFDETLAVDTVSLTINKGEIFALLGGSGSGKSTLLRMLAGFERPTEGRIFLDGQDITDLPPYERPINMMFQSYALFPHMSVAQNIAFGLKQDGLPKAEIDERVAEMLKLVHMTQYAKRKPHQLSGGQRQRVALARSLAKRPKLLLLDEPMGALDKKLRSQMQLELVEIIERVGVTCVMVTHDQEEAMTMAQRIAIMHLGCIEQIGSPMDIYETPASRLVCEFIGNVNLFDGVLVEDVQDHAVIACPQLENPIYIGHGISTRAEDKRITYALRPEKVMISAQKPDNLEHAGHNWAQGTVYDIAYLGGHSVYYIKLASGMIVQAFMANAERHVARPTWDQSVYISWYDDSGVVLQS
>NC_023019.1|WP_003084301.1|340028_341126_+|polyamine-ABC-transporter-substrate-binding-protein
MQHSIGKTLLVAALATAIAGPVQAEKKSLHIYNWTDYIAPTTLKDFTKESGIDVSYDVFDSNETLEGKLVSGHSGYDIVVPSNNFLGKQIQAGAFQKLDKSKLPNWKNLDPALLKQLEVSDPGNQYAVPYLWGTNGIGYNVAKVKEVLGDQPIDSWAILFEPENMKKLAKCGVAFMDSGDEMLPAALNYLGLDPNTHDPKDYKKAEEVLTKVRPYVSYFHSSKYISDLANGNICVAFGYSGDVFQAAARAEEAGKGIDIQYVIPKEGANLWFDLMAIPADAKAADNAYAFIDYLLRPEVIAKVSDYVGYANAIPGARPLMDKSVSDSEEVYPPQAVLDKLYVSAVLPAKVLRLQTRTWTRIKTGK
>NC_023019.1|WP_003084299.1|338506_339610_+|polyamine-ABC-transporter-substrate-binding-protein
MMKRFGKTLLALTLAGSVAGMAQAADNKVLHVYNWSDYIAPDTLEKFTKETGIKVVYDVYDSNEVLEAKLLAGKSGYDVVVPSNSFLAKQIKAGVYQKLDKSKLPNWKNLNKDLMHTLEVSDPGNEHAIPYMWGTIGIGYNPDKVKAAFGDNAPVDSWDLVFKPENIQKLKQCGVSFLDSPTEILPAALHYLGYKPDTDNPKELKAAEELFLKIRPYVTYFHSSKYISDLANGNICVAIGYSGDIYQAKSRAEEAKNKVTVKYNIPKEGAGSFFDMVAIPKDAENTEGALAFVNFLMKPEIMAEITDVVQFPNGNAAATPLVSEAIRNDPGIYPSEEVMKKLYTFPDLPAKTQRAMTRSWTKIKSGK
>NC_023019.1|WP_003084297.1|337020_338391_+|aspartate-aminotransferase-family-protein
MNSQITNAKTREWQALSRDHHLPPFTDYKQLNEKGARIITKAEGVYIWDSEGNKILDAMAGLWCVNVGYGREELVQAATRQMRELPFYNLFFQTAHPPVVELAKAIADVAPEGMNHVFFTGSGSEANDTVLRMVRHYWATKGQPQKKVVIGRWNGYHGSTVAGVSLGGMKALHEQGDFPIPGIVHIAQPYWYGEGGDMSPDEFGVWAAEQLEKKILEVGEENVAAFIAEPIQGAGGVIVPPDTYWPKIREILAKYDILFIADEVICGFGRTGEWFGSQYYGNAPDLMPIAKGLTSGYIPMGGVVVRDEIVEVLNQGGEFYHGFTYSGHPVAAAVALENIRILREEKIIEKVKAETAPYLQKRWQELADHPLVGEARGVGMVAALELVKNKKTRERFTDKGVGMLCREHCFRNGLIMRAVGDTMIISPPLVIDPSQIDELITLARKCLDQTAAAVLA
>NC_023019.1|WP_003084290.1|335596_336955_+|glutamine-synthetase
MTTKLDQLTSWLKERKITEVECLISDLTGIARGKISPTNKFIAEKGMRLPESVLLQTVTGDYVEDDIYYDLLDPADIDMVCRPDENAVFLVPWAIEPTAMVIHDTFDKLGNPIELSPRNILKRVLKMYADKGWRPIVAPEMEFYLTKRSDDPDYPLQAPVGRSGRQETGRQSFSIDAANEFDPLFEDMYDWCEAQGLDLDTLIHEEGTAQMEINFRHGDALDLADQILVFKRTMREAALKHNVAATFMAKPMTGEPGSAMHLHQSIVDVKTGKNIFSNADGTMSELFLHHIGGLQKFIPEVLPLFAPNVNSFRRFLPDTSAPVNVEWGEENRTVGLRVPDSSPENRRVENRLAGADANPYLALAASLLCGYIGMVEGIKPSAQVKGRGYERRNLRLPLTIEAALERMENCKPLEQYLGSKFISGYVAVKRAEHENFKRVISSWEREFLLLSV
>NC_023019.1|WP_023874817.1|334803_335556_+|gamma-glutamyl-gamma-aminobutyrate-hydrolase-family-protein
MSRLPLIGVTACTKQIGLHPYHIAGDKYLRAVVNGAGGLPLIIPALGESIDQAALLDRVDGLLFTGSPSNVEPRHYSGPASEPGTLHDSDRDATTLPLVRAAIDAGIPVLGICRGFQEMNVAFGGSLHQKVHEVGTFMDHREPADQPLEVQYAPRHAMHVQPGGVLAGIGLPSEFQVNSIHGQGVDRLAPGLRVEALAPDGLVEAISVEGAKAFALGVQWHPEWQVLTNPNYLAIFQAFGKACSKRAGQR
>NC_023019.1|WP_016263947.1|333148_334525_-|glutamine-synthetase
MSVPQRAVQLTEPSEFLKEHPEVQFVDLLIADMNGVVRGKRIERNSLNKVFEKGINLPASLFALDITGSTVESTGLGLDIGDADRICYPIPGTLSMEPWQKRPTAQLLMTMHELEGDPFFADPREVLRQVVARFTEMELTIVAAFELEFYLIDQENVNGRPQPPRSPISGKRPQSVQVYSIDDLDEYVECLQDIIDGARAQGIPADAIVAESAPAQFEVNLNHVNDALKACDHAVLLKRLVKNIAYDHEMDTTFMAKPYPGQAGNGLHVHISLLDKHGNNIFTSEDPEQNAALRHAIGGVLETLPASMAFLCPNVNSYRRFGSQFYVPNAPSWGLDNRTVALRVPTGSPDAVRLEHRVAGADANPYLLLAAVLAGVHHGLTNKVEPGAPIEGNSYEQMEPSLPNNLRDALRELDESEIMAKYIDPKYIDIFVACKESELEEFEHSISDLEYNWYLHTV
>NC_023019.1|WP_022580768.1|331831_332893_-|polyamine-ABC-transporter-substrate-binding-protein
MPRLSVLLFLALAPWLAQAKETLRVYNWNDYIDPQVLESFQKDTGIRVEYHTFATAEELDKALRSGEAIDVAVPSHDTLPALLKDNLLRPLDFTQLPNRSHLDRQLLSKLAAVDPDNRHAVPYLWGAVGLAINTPQAEAAYGGPLPNSWSLLFDASQSQRLKSCGISLLDAPDETLAILLNYQGRNLGRTAPSQVRRAAEALHGLRPNLRYVDSERYIADLEGGRLCLAMAWVGDALRAAKAGQPVSFEVPQEGSVLFIDNLVIPASAQHPRQAHRFIDYLMQPKIAAQITAATLYPSGNADAAGFLDPALRQQPGLYPDRDTSRRLFALETPPEKLRPVVDEIWKAFRGASH
>NC_023019.1|WP_003128566.1|331105_331771_-|TetR/AcrR-family-transcriptional-regulator
MQPTSSTRKPRASSQARIAAILDAARGLLANEGIGGLTIYSVAERAEMPPSSVYHFFPSVPALLQGLTGEVHAAFRACLEQPVDHAGLRCWRDLSRIVEERMLAVYARDAAARQLILASHGLAEVTQADRQHDVQLGQAMRALFERHFLLPPLPTDIEIFSLAMELGDRVYALSVQRHGIIDARLAEEGMRVFDAYLGLYLPPILEKRSEPLTGFISDLNR
>NC_023019.1|WP_003111119.1|330064_330943_-|N-carbamoylputrescine-amidase
MTRNVTVAATQMACSWDRPANIARAEKLVRQAAARGAQIILIQELFETPYFCQKPNPDYLQLATTVEENAAIAHFQALARELQVVLPISFFERAGRARFNSIAVIDADGGNLGVYRKSHIPDGPGYHEKYYFNPGDTGFKVWQTRYARIGVGICWDQWFPESARSMALLGAELLFYPTAIGSEPHDASISSRDHWQRVQQGHAGANLMPLVASNRIGREEQDGYDITFYGSSFIADPFGEKVEELNRTEEGILVHTFDLDALERTRSAWGVFRDRRPNLYGPLKTLDGSLES
>NC_023019.1|WP_023874818.1|344372_346760_-|penicillin-acylase-family-protein
MKRTLTVIAVAVAAAAAGGAWYLHAKQPLRNGSLALAHLQAPVDVRYDERGVPHLYAQNQTDLYRALGYVHAQDRLFQMEMLRRLARGELAEVLGAKLVDTDRLFRTLRIRDHAAEYSARQDKQSQPWKVLEAYLDGVNQFQENNPAPLEFDLLGIPRRPFTPEDTLSIAGYMAYSFAAAFRTEPVLTYIRDELGSDYLRIFDLDWHPQGVLTPSGALGAGDWKDLGALARLSQQALEDAGLPQFEGSNAWVVAGSRTASGKPLLAGDPHIRFAAPAVWYEAQLSAPGFELYGHHQALNPFASLGHNRAFGWSLTMFQNDDLDLVAEKVNPDNPNQVWYQGEWVDLQSEEQEIAVKGAAPVKLTLRRSPHGPIVNDALGASSGKTPIAMWWAFLETENPVLDAFYQLNRADTLAKARAAASKIHSPGLNLVWANAAGDIGWWASAALPKRPEGVNPSFILDGSKGEADKSGFYPFADNPQEENPARGYIVSANFQPVPANGRPIPGYYNLADRGQWLDTQLADRGTKWNLDNSRALQLGNRTGYAPRLLAPLLPVLREVVDDAEGKRLVEQLAAWKGDYPVDSTAATLFNQLLFQIAEGALHDELGDAFFDSLIATRAIDSALPRLAGDADSPWWDDRRTERRETRADIVRAAWNASLAHLRGTLGNDPSGWLWGKAHTLTHEHALGQQALLRRLLNVGPFAAPGTHEVPNNLSAKIGPAPWAVTYGPSTRRLVDFADPTHSLGINPVGQSGVPFDGHYDDQAEAYIEGHYLPQHYEENEVKANSKGVLVLEPKR
>NC_023019.1|WP_003112941.1|346870_347923_+|AraC-family-transcriptional-regulator
MQDDPSTSPLTHSATLRRLLYEALDALGLDPTRVYRSVYRRIPLPPPTLGGRLVHDNAPLFWTELAAVTGDADIGLHLGEAMKPRLLDVVGYLLLSARDLEEALRSFVRFQHILSGGFAARLEVEGETARLILDINYLGYASLRQQIECLMLLFLKLLALISDDEFVAERIEFRHRAPPRLGEHRRLFGRLPLFSRPHDALVFSAALLRRPSRNANPDMHDVLTRHAEEQSRELSENRLLNRVRYLIELRLGEGYGLRQCAAELGLGSGALQRALAAGGASFRQVRDEVRRQRASEMLLAGRAIREVAKACGFAELSPFYRAFRRWHAAPPEQYRARLAKREEGYSTSGT
>NC_023019.1|WP_023874819.1|347901_348405_-|hypothetical-protein
MSLRPTLALLALVSLPLMAAQNDPQPSSKELMKEHQAQIQNDLADVDYKRKRIVEANMNLTDQEGEKFWPIYNTYRTESDKLSKETLKLLLDYAQAYNSGNVSDDQASKLIARVDDLQEDRLELRDKYVKRIAKNVSPKRAMRFLQIEIQLDAIATLEIGRQVPLVE
>NC_023019.1|WP_003118762.1|348509_349121_-|thiol-disulfide-isomerase
MASLAPVFRVNAMTPRRKTLLVSLVGLLWAGGLLAAYWWFEIRYIRPFSEQTTLFSGDSLRLPAELAGPGAIRLVHFWDPACPCNVGNQQHLGELIERFAGKGVEFHVLQKPGSQGRLPDNLAALRPLAGLPGSEQLPASPAVAIWDRDGRLAYFGPYSEGAVCTSSNSFIEPILEALLQGRPVDATHTLAVGCYCPWTPEKG
>NC_023019.1|WP_023874820.1|349119_350139_+|alpha/beta-hydrolase
MCSRAAEYPWVSPVARPRIDCSPEPPMSEAFNPDYLRQHLRPLAAAEADAAVLAYQAYYGLDLRSRHPRLQARLGSMADDGRRLAVQAWLLPEARGSLLLMHGYYDHMGLYRHVVDWALGMGFSVLACDLPGHGLSEGERASIRDFAEYQAVFKGLLGQAAELDLAAPWHLCGQSTGGAILLDYLLHGGERPELGETILLAPLVRPRAWGWSKLSYRLLSPFVDSIPRRFSENSSDPQFLDFLREHDPLQPRTLPTAWVGALTRWVPRIERAPRRALSPLVVQGESDETVDWRHGLKVLREKFDEPRILLLEEARHHLANESEGLRRRYFDFLSDALGA
>NC_023019.1|WP_003084320.1|350158_350911_-|hypothetical-protein
MRALLAFALLLVGLPALADPYQRLYQAAGWPDQRAHFSDALDAAQKRYQDKLPPALYQTLVDNSNRRFAPAEVDQRALNGLRENLPDSASPLNFFESPLGRKVVAAEVLATRRDQLLQHSNGLPRQTASEPRRALVKRLAQVLPAREAGAEVSLALAGVAADSLSQMLPGLPGLLGGGQTGQLLEGQRQRLVQQIGADLENTLLYVYRDLSDAELTQYVNFAESPAGRSYYQAALAALKAGLAVDQAVAP
>NC_023019.1|WP_003128868.1|350959_351658_+|2OG-Fe(II)-oxygenase
MGRYCRHAADRLSRHRGGTLQWTMHINVNHPLLHRIVDELVDQGWSHQSIFMPERLTTRLAEECRTRAVAGDLTPAAIGRGDGQVIREGIRGDLTQWLEPGESVACDEYLGVMDSLRQALNASLFLGLEDFECHFALYPPGAYYQKHVDRFRDDDARTVSAVLYLNDAWLPEHGGALRLHLPQRQVDIQPTGGSLVVFMSAGTEHEVLPASRDRLSLTGWFRRRNESLLQLS
>NC_023019.1|WP_003084327.1|351679_352234_-|hypothetical-protein
MLPTRSLLPFFLAPALLASAASQAAMEALDNDSLSQVTGQAGISLRLDLRAGAARVAWVDDGGSLSLRNLVIDNGCVKAGDCPDGRGGNIPLGAAQLGLSLPIFGVEQPTLALDVTTGSGGGQQLAISLPDLATINDQLIASGLPAQRIRLRVASDLYIGDNSIGRIELRDITDLRGTIKVWGH
>NC_023019.1|WP_003084333.1|352499_352994_+|DUF523-domain-containing-protein
MQKVLVSRCLLGHLVRYDGGSHGPFDLLSRWHAQGRIVALCPEVAGGLPTPRPPAEIPGGQGGEVLDRLNRVFTVDGEDVSEAFLLGAEAAVELVRRHDIRMAVLKARSPSCGNLENYDGRFNGSRVAGEGVTAAALKRMGVLVFNEDELDRAAVCLAGLDAGG
>NC_023019.1|WP_003084339.1|352998_353691_-|amino-acid-ABC-transporter-permease
MNSLQKLLEWLANLVELLGMAWPFLLQGAMYTVLFAAVSMVLGLILGFSVAVVRVTKVPVVSQIAAVYVSAFRGTPLLVQIFVLYYGLPSVGIEFTPVTAGILALTLNVAAYLSESMRGAILGIDKGQWEAGLSVGLTWGQTLWNIITPQALRLAVPSLSNSLISLIKDTSLISVITVTELMLATKEVIAETFQPLPLYLAAAGIYWLLSALFERVQKALENRLTAPLRR

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Crispr_ID: NC_023019_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_023019_2

1642480-1642630

Orphan

Consensus_repeat	Method
GCGGTTATTCGCCCTACACGGGGAGGGAGCAAGCGGTAGGGCGAATAAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_023019_2

>merge|NC_023019|2|1642480-1642630|CRISPRCasFinder
GCGGTTATTCGCCCTACACGGGGAGGGAGCAAGCGGTAGGGCGAATAACCGCCCCGGGCGTTATCCGCCGAAACGTCTGCCGAGGTGGCGGATAACCGCGTAGCGGTTATTCGCCCTACACGGGGAGGGAGCAAGCGGTAGGGCGAATAAC

>NC_023019|2|2|1642480-1642630|CRISPRCasFinder
GCGGTTATTCGCCCTACACGGGGAGGGAGCAAGCGGTAGGGCGAATAAC	CGCCCCGGGCGTTATCCGCCGAAACGTCTGCCGAGGTGGCGGATAACCGCGTA
GCGGTTATTCGCCCTACACGGGGAGGGAGCAAGCGGTAGGGCGAATAAC

Protein	Signature genes	Signature genes Name	Protein_function
NC_023019.1\|WP_003122196.1\|1646631_1646925_+\|hypothetical-protein	unknown	unknown	unknown
NC_023019.1\|WP_003091896.1\|1639757_1640318_-\|GTP-cyclohydrolase-I-FolE	unknown	unknown	gnl\|CDD\|237149
NC_023019.1\|WP_003091888.1\|1642680_1643574_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176129
NC_023019.1\|WP_023875039.1\|1638554_1638893_-\|HopJ-type-III-effector-protein	unknown	unknown	gnl\|CDD\|378082
NC_023019.1\|WP_009313635.1\|1640335_1641040_-\|dihydromonapterin-reductase	unknown	unknown	gnl\|CDD\|180586
NC_023019.1\|WP_003091909.1\|1636509_1637298_+\|aliphatic-sulfonate-ABC-transporter-permease-SsuC	unknown	unknown	gnl\|CDD\|183100
NC_023019.1\|WP_003091873.1\|1648858_1649203_-\|cupin-domain-containing-protein	unknown	unknown	gnl\|CDD\|225981
NC_023019.1\|WP_003102319.1\|1641987_1642440_+\|flavodoxin	unknown	unknown	gnl\|CDD\|168208
NC_023019.1\|WP_003111015.1\|1641150_1641708_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225765
NC_023019.1\|WP_003091885.1\|1643669_1644059_+\|CidA/LrgA-family-protein	unknown	unknown	gnl\|CDD\|224298
NC_023019.1\|WP_015649250.1\|1647040_1647952_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|187611
NC_023019.1\|WP_003091898.1\|1638944_1639256_-\|DUF1244-domain-containing-protein	unknown	unknown	gnl\|CDD\|226023
NC_023019.1\|WP_003091865.1\|1649237_1650644_-\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|274522
NC_023019.1\|WP_023875040.1\|1645636_1646533_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223669
NC_023019.1\|WP_003091900.1\|1638159_1638375_+\|molybdopterin-binding-protein	unknown	unknown	gnl\|CDD\|226113
NC_023019.1\|WP_023875038.1\|1637294_1638119_+\|aliphatic-sulfonates-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|183055
NC_023019.1\|WP_003091874.1\|1648068_1648839_+\|crotonase/enoyl-CoA-hydratase-family-protein	unknown	unknown	gnl\|CDD\|236205
NC_023019.1\|WP_003102323.1\|1644045_1644732_+\|LrgB-family-protein	unknown	unknown	gnl\|CDD\|224265
NC_023019.1\|WP_003091880.1\|1644860_1645640_+\|class-II-aldolase/adducin-family-protein	unknown	unknown	gnl\|CDD\|235916
NC_023019.1\|WP_003091897.1\|1639384_1639756_-\|dihydroneopterin-triphosphate-2'-epimerase	unknown	unknown	gnl\|CDD\|183053

Protein	Function_ID	Function_description	E-value
NC_023019.1\|WP_003091896.1\|1639757_1640318_-\|GTP-cyclohydrolase-I-FolE	gnl\|CDD\|237149	PRK12606, PRK12606, GTP cyclohydrolase I; Reviewed.	1.62465e-124
NC_023019.1\|WP_003091888.1\|1642680_1643574_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|176129	cd08438, PBP2_CidR, The C-terminal substrate binding domain of LysR-like transcriptional regulator CidR, contains the type 2 periplasmic binding fold. This CD includes the substrate binding domain of CidR which positively up-regulates the expression of cidABC operon in the presence of acetic acid produced by the metabolism of excess glucose. The CidR affects the control of murein hydrolase activity by enhancing cidABC expression in the presence of acetic acid. Thus, up-regulation of cidABC expression results in increased murein hydrolase activity. This substrate binding domain has significant homology to the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	9.18963e-88
NC_023019.1\|WP_023875039.1\|1638554_1638893_-\|HopJ-type-III-effector-protein	gnl\|CDD\|378082	pfam08888, HopJ, HopJ type III effector protein. Pathovars of Pseudomonas syringae interact with their plant hosts via the action of Hrp outer protein (Hop) effector proteins, injected into plant cells by the type III secretion system. The proteins in this family are called HopJ after the original member HopPmaJ.	1.452e-53
NC_023019.1\|WP_009313635.1\|1640335_1641040_-\|dihydromonapterin-reductase	gnl\|CDD\|180586	PRK06483, PRK06483, dihydromonapterin reductase; Provisional.	3.39143e-150
NC_023019.1\|WP_003091909.1\|1636509_1637298_+\|aliphatic-sulfonate-ABC-transporter-permease-SsuC	gnl\|CDD\|183100	PRK11365, ssuC, aliphatic sulfonate ABC transporter permease SsuC.	1.22104e-135
NC_023019.1\|WP_003091873.1\|1648858_1649203_-\|cupin-domain-containing-protein	gnl\|CDD\|225981	COG3450, COG3450, Predicted enzyme of the cupin superfamily [General function prediction only].	8.31479e-48
NC_023019.1\|WP_003102319.1\|1641987_1642440_+\|flavodoxin	gnl\|CDD\|168208	PRK05723, PRK05723, flavodoxin; Provisional.	5.35164e-98
NC_023019.1\|WP_003111015.1\|1641150_1641708_-\|hypothetical-protein	gnl\|CDD\|225765	COG3224, COG3224, Uncharacterized protein conserved in bacteria [Function unknown].	1.18537e-84
NC_023019.1\|WP_003091885.1\|1643669_1644059_+\|CidA/LrgA-family-protein	gnl\|CDD\|224298	COG1380, COG1380, Putative effector of murein hydrolase LrgA [General function prediction only].	3.74785e-31
NC_023019.1\|WP_015649250.1\|1647040_1647952_+\|SDR-family-oxidoreductase	gnl\|CDD\|187611	cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-hydroxyacyl-CoA dehydrogenase-like, classical(c)-like SDRs. Beta oxidation of fatty acids in eukaryotes occurs by a four-reaction cycle, that may take place in mitochondria or in peroxisomes. (3R)-hydroxyacyl-CoA dehydrogenase is part of rat peroxisomal multifunctional MFE-2, it is a member of the NAD-dependent SDRs, but contains an additional small C-terminal domain that completes the active site pocket and participates in dimerization. The atypical, additional C-terminal extension allows for more extensive dimerization contact than other SDRs. MFE-2 catalyzes the second and third reactions of the peroxisomal beta oxidation cycle. Proteins in this subgroup have a typical catalytic triad, but have a His in place of the usual upstream Asn. This subgroup also contains members identified as 17-beta-hydroxysteroid dehydrogenases, including human peroxisomal 17-beta-hydroxysteroid dehydrogenase type 4 (17beta-HSD type 4, aka MFE-2, encoded by HSD17B4 gene) which is involved in fatty acid beta-oxidation and steroid metabolism. This subgroup also includes two SDR domains of the Neurospora crassa and Saccharomyces cerevisiae multifunctional beta-oxidation protein (MFP, aka Fox2). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs.	5.03384e-146
NC_023019.1\|WP_003091898.1\|1638944_1639256_-\|DUF1244-domain-containing-protein	gnl\|CDD\|226023	COG3492, COG3492, Uncharacterized protein conserved in bacteria [Function unknown].	2.30637e-55
NC_023019.1\|WP_003091865.1\|1649237_1650644_-\|FAD-dependent-oxidoreductase	gnl\|CDD\|274522	TIGR03329, Phn_aa_oxid, putative aminophosphonate oxidoreductase. This clade of sequences are members of the pfam01266 family of FAD-dependent oxidoreductases. Characterized proteins within this family include glycerol-3-phosphate dehydrogenase (1.1.99.5), sarcosine oxidase beta subunit (1.5.3.1) and a number of deaminating amino acid oxidases (1.4.-.-). These genes have been consistently observed in a genomic context including genes for the import and catabolism of 2-aminoethylphosphonate (AEP). If the substrate of this oxidoreductase is AEP itself, then it is probably acting in the manner of a deaminating oxidase, resulting in the same product (phosphonoacetaldehyde) as the transaminase PhnW (TIGR02326), but releasing ammonia instead of coupling to pyruvate:alanine. Alternatively, it is reasonable to suppose that the various ABC cassette transporters which are also associated with these loci allow the import of phosphonates closely related to AEP which may not be substrates for PhnW.	2.77831e-57
NC_023019.1\|WP_023875040.1\|1645636_1646533_+\|alpha/beta-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	1.6462e-19
NC_023019.1\|WP_003091900.1\|1638159_1638375_+\|molybdopterin-binding-protein	gnl\|CDD\|226113	COG3585, MopI, Molybdopterin-binding protein [Coenzyme metabolism].	5.68345e-18
NC_023019.1\|WP_023875038.1\|1637294_1638119_+\|aliphatic-sulfonates-ABC-transporter-ATP-binding-protein	gnl\|CDD\|183055	PRK11247, ssuB, aliphatic sulfonates transport ATP-binding subunit; Provisional.	6.65201e-167
NC_023019.1\|WP_003091874.1\|1648068_1648839_+\|crotonase/enoyl-CoA-hydratase-family-protein	gnl\|CDD\|236205	PRK08259, PRK08259, crotonase/enoyl-CoA hydratase family protein.	2.19023e-155
NC_023019.1\|WP_003102323.1\|1644045_1644732_+\|LrgB-family-protein	gnl\|CDD\|224265	COG1346, LrgB, Putative effector of murein hydrolase [Cell envelope biogenesis, outer membrane].	2.0025e-93
NC_023019.1\|WP_003091880.1\|1644860_1645640_+\|class-II-aldolase/adducin-family-protein	gnl\|CDD\|235916	PRK07044, PRK07044, aldolase II superfamily protein; Provisional.	4.352e-160
NC_023019.1\|WP_003091897.1\|1639384_1639756_-\|dihydroneopterin-triphosphate-2'-epimerase	gnl\|CDD\|183053	PRK11245, folX, dihydroneopterin triphosphate 2'-epimerase.	3.45838e-76

>NC_023019.1|WP_003102319.1|1641987_1642440_+|flavodoxin
MKVAILSGSVYGTAEEVARHAQKLLSAAGLEASHLPRASLDELKAFAPEAFLVVTSTTGMGELPDNLQPLYYAIRDQLPAWHGLPGGVIGLGDSSYGDTFCGGGEQVRELFGELGVREVLPMLRLDASETVTPETDAEPWLAEFAAALKG
>NC_023019.1|WP_003111015.1|1641150_1641708_-|hypothetical-protein
MSTAPVTLLVARRVAAGRYRDFLAWQREGEALAADFPGYLGSGALAPPAGGDEFQMIFRFADDATLAAWAHSASRQAWLERGQGLFDEPREHRAHGLAAWFDDNRKPPRWKQSVAIWLAFFPVSLAFNLGAGPYLGELSLAARVLLSTLVLTPLMTYWFIPLSSRLLAPWLHRRPQRAASLPEAH
>NC_023019.1|WP_009313635.1|1640335_1641040_-|dihydromonapterin-reductase
MATAPILITGASQRVGLHCARRLLADGESVIVSYRSERPALDELRQAGALTLHADFASEAGIFAFIGSLRQHTDSLRAIVHNASDWVAETPGHEAEAFQQLFSVHMLAPYLINLHCAELLERSQPADIVHLTDDVARKGSARRIAYCASKAGLDNLTLSFAARFAPRIKVNAISPALVMFNDGDDAEYRARTLAKSALGIEPGPEVIYQSLRYLLDNPYVTGTTLTVNGGRHVK
>NC_023019.1|WP_003091896.1|1639757_1640318_-|GTP-cyclohydrolase-I-FolE
MNPALSQHYREILVGLGEDPQREGLLDTPKRAAKAMQYLCHGYGQTLEEIVNGALFASDNDEMVIVRDIELYSLCEHHLLPFIGKAHVAYIPTGKVLGLSKVARIVDMFARRLQIQENLTRQIAEAVRQVTSAAGVAVVIEAQHMCMMMRGVEKQNSQMFTSVMLGAFRDSNTTRQEFLQLIGRSK
>NC_023019.1|WP_003091897.1|1639384_1639756_-|dihydroneopterin-triphosphate-2'-epimerase
MPRLEPGMARIRVKDLRLRTFIGIKEEEILNKQDVLINLTILYPAADAVEVNDIEHALNYRTITKAIIRHVEENRFALLERMTQEILDLVMENPAVRYAEVEVDKPHALRFAESVSITLAGHR
>NC_023019.1|WP_003091898.1|1638944_1639256_-|DUF1244-domain-containing-protein
MTAANLTEQQRLELEAAAFRTLVHHLQTRKDVQNIDLMNLAGFCRNCLSKWYKAAADDLGVEVSNDQAREEIYGMPYAEWKAKYQKEASPEQQAAFAKSQGNA
>NC_023019.1|WP_023875039.1|1638554_1638893_-|HopJ-type-III-effector-protein
MTLTDFRARLRSEHHLFTDTLAFIAEHYSYTPSAFDNGSVSNPAGQNEGSCKTLGFAILEGLSLEETLLAFGEHYRAVRDNPEGNDHANIRALQQTGLAGVHFERQPLSRRG
>NC_023019.1|WP_003091900.1|1638159_1638375_+|molybdopterin-binding-protein
MTIKAINVRNQFKGTVKEIIEGPVLSEIDVQTAAGIVTSVITTRSVKELELAIGSEVIAFVKSTEVSIAKL
>NC_023019.1|WP_023875038.1|1637294_1638119_+|aliphatic-sulfonates-ABC-transporter-ATP-binding-protein
MNAHNAAFGGTPQRLKRGIPLALRGVARRFGEREVLKDIDLLVPAGQFVAIVGRSGCGKSTLLRLLAGLEQPSRGELLAGSAALAEAREDTRLMFQDSRLLPWKRVIDNVGLGLRGDWRAKALQALRAVGLAERANEWPAALSGGQKQRVALARALIHEPRLLLLDEPLGALDALTRIEMQQLIEGLWREHGFTVLLVTHDVSEAVAVADRVILIEDGEIGLDLPVELPRPRSRGSARLAALEAEVLNRVLAQPELPPQPEPVSPLPTQLRWAL
>NC_023019.1|WP_003091909.1|1636509_1637298_+|aliphatic-sulfonate-ABC-transporter-permease-SsuC
MSISKRLAERLAPWALPLVLLAVWQAAVEFGWLSSRILPAPSAVLEAGWALLRSGEIWQHLAISGWRAAIGFLIGGTIGLVLGFVTGLSKWGERFLDSSVQMIRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIYLNTYHGIRGIDPGLLEMARSYGLSGFALFRQVILPGALPSILVGVRFALGFMWLTLIVAETISASSGIGYLAMNAREFLQTDVVVLAILLYAVLGKLADLAARGLERVWLRWHPAYQVKGGGA
>NC_023019.1|WP_003091888.1|1642680_1643574_-|LysR-family-transcriptional-regulator
MEFRQLRSFVEVVRQGSFTQAAQVRHASQSTISKQVAQLEQSLGVQVLERNGPHVRLTDAGAVVFRRAEEMLRLRRDLLSELDDLSQLNRGELRLGLPLLGADALFAQRFAEYRRRYPNIAVHLVEGGSKTMEQAVLAGELELAGSLTPADDGFDYQPFCNEPLDVLLPAGHPKAAAASVALGELADSPFLLYQQSFTLNDRLLRACLEAGFSPREGGRSGQADFLGALVAANQGVVLLPRAIAREIERPGVVRVLLREPDLRWDIAFIWRRGGYLSRAAQAWLELLRERPLEESPA
>NC_023019.1|WP_003091885.1|1643669_1644059_+|CidA/LrgA-family-protein
MLPPLVRRLSRLAAELAVLIAFWWAGGWLAKAIGLPLPGGVVGLAALLLLFASGLLRPAWLQAGAGLLLAEMLLFFIPALMSLLDYGALLRSEGWRILLVIMLSTLLVMLVTAVSVEWMCRWRARHESR
>NC_023019.1|WP_003102323.1|1644045_1644732_+|LrgB-family-protein
MSLDKQALFWLAATVGGYLLSRQLYRRVKWYWLSPIVFVPVLLYALAIPTHTRYADYARDTNWLVALLGPATVAFAIPIWQQRELLMRHWPALLAGMFAGTAVAIGSSWALAQALALDGQVTLSLLPRSITTPFAMEMSHDLGGVPELTAAFVMITGVFGAVIGGTLLRVLRLRTPLARGALFGVGAHGAGTSRAYEFGGEEGSAAGLLMVLTGLFNLLVAPLVAHCL
>NC_023019.1|WP_003091880.1|1644860_1645640_+|class-II-aldolase/adducin-family-protein
MTAVHSLPADVQAQVSAAEWQTRVDLAACYRLVALHGWDDLIFTHISAKVPGTEDFLINPFGLMFHEITASSLVKVDASGKKLMDSPYEINPAGYTIHSAVHEVRHDVECVLHTHTAAGIAVSCQKQGLLPLSQQSLFVLSSLSYHAYEGVALNHEEKARLQADLGTSNFLILPNHGLLTCGGSIADTFLMMFTLQRACEVQVMAQSGGAELIHIPGQILAGARDMIAGVMRSKTGMGGQLAWPALLRKLDQQNPGYRQ
>NC_023019.1|WP_023875040.1|1645636_1646533_+|alpha/beta-hydrolase
MTAALPGIPLEAWRRRGRTLDFKGFPIRYWEAGQGRPLLLIHGFPSAAWDWHYLWEPLAQRYRVLVCDLLGFGDSAKPRAHRYSLLEQADLQQALLGRLGVDEPLHVLAHEYGDSVAQELLARHHEGRLRLASCVFLNGGLFPETHRPVLSQKLLLSPLGGLFGRLFDRRALARNFAKVFGPRSQPGETELDAFWSLIESNQGQRVMHRLIRYIVDRREQRERWVAALQHGGVPLRVIDGAVDPISGAHMVERYRQLVADADCVLLDGIGHYPQIEAPAAVLEHYLAFRARLDDSEFS
>NC_023019.1|WP_003122196.1|1646631_1646925_+|hypothetical-protein
MHDPVSPLRVFDEGSWLFRQMVQAQPFIRQSGMVLAELGLLLALGLGYLCWQEGSRWYAVGAGFALLGSLLLVVVRHNYDWWLFKLGPRGRLYIPFD
>NC_023019.1|WP_015649250.1|1647040_1647952_+|SDR-family-oxidoreductase
MSDALRFDDQVVIVTGAGGGLGRAHALLFAKHGARVVVNDLGGSTHGEGASASAADKVVAEIRAAGGTAVANHDSVTDGGRIVENALDAFGRVDVVVNNAGILRDKTFHKMEDADWDLVYQVHVEGAYKVTRAAWPHLREQAYGRVVFTSSTSGIYGNFGQSNYGMAKLGLYGLTRTLALEGRKNNILVNAIAPTGGTRMTEGLIPPQVFEQLKPELVSPLVVYLGSSACEDTSGLYEVGGGWIGKVRWERSLGFGFDPKAGFDAEDVAAHWQQICDFENAAHPADNVEALREMMANLQRHAL
>NC_023019.1|WP_003091874.1|1648068_1648839_+|crotonase/enoyl-CoA-hydratase-family-protein
MSVIVERNGPVTTLVIARPERRNAVDRPTAQALADALREFEADDTARVAVLTGSGGNFCAGADLAAVAEDGERRNRLEAEGDGPMGPSRMQLGKPLIAAIEGYAVAGGLELALLADLRVMAEDAICGVFCRRFGVPLIDGGSVRLPRIVGQGRALDLILTGRPVKADEALQIGLANRVVPSGSARAEAEELAAELAAFPQTCMLADRASVYAQWELSFDVALANEFQGGLAVIESGETLEGAQRFKDGEGRHGRFE
>NC_023019.1|WP_003091873.1|1648858_1649203_-|cupin-domain-containing-protein
MALTLLKNTAGADLGAASPVAVPLGEPVAQTRAYAVERTDQVETGIWECTPGRWRRQIVEQEFCHFLQGRCTFTPDGGETIRIEAGDALLLPENSLGVWDVQETVRKSYVIIHR
>NC_023019.1|WP_003091865.1|1649237_1650644_-|FAD-dependent-oxidoreductase
MSAWRHLSLWMNQLDDPLEARPSLEESLEVDVAIVGAGYTGLWTAYYLKRRAPQLRVAIVEAETAGFGASGRNGGWLMGNLLGEDGLLAGLPPERRRAGYDLLHGIPDEVARVLQEEGIDCDYRKGGVLYCAARYPEQERRLRAYLHDLYAEGLDESDYRWLTPQELDQQLRIPGSYGAIHSPHCATIQPARLARGLARAVERLGVRLFEKSRVLHWQRGLLRTERGELRAEWIVPAVEGYAASLPPLGHYQLPVQSLLVATEPLPSSVWAEIGLERGQAFSEFSRQVTYGQRTADDRLAFGARGGYRFGGKLRNDFSLDDEEVGLRRYLFGELFPLLKDARISHTWGGNLGMARRFRPHMLLDRASGIALSGGYGGEGVGASNLGGRTLAALILGEDSELLRQPWVLGERPLDSLARWEPEPCRWLGYNAIIRSFVHEDRVLADPHSAPWRRSLAQTLAAGMESLMR

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

635356 : 717520

Pseudomonas_phage(39.02%)

tail,tRNA,holin,plate

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003129196.1\|635356_636382_+\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	8.3e-109	58.1
WP_003085061.1\|636460_637030_-	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA
WP_003099587.1\|637113_637467_+	dihydroneopterin aldolase	NA	NA	NA	NA
WP_003085067.1\|637457_638000_+	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA
WP_003099584.1\|637972_639205_-	multifunctional CCA addition/repair protein	A0A076G5T8	Escherichia_phage	2.6e-77	43.1
WP_003085071.1\|639248_639755_-	DUF4136 domain-containing protein	NA	NA	NA	NA
WP_003099581.1\|639848_641402_-	SpoVR family protein	NA	NA	NA	NA
WP_003085075.1\|641398_642670_-	YeaH/YhbH family protein	A0A140HLI1	Bacillus_phage	4.2e-09	37.2
WP_003085078.1\|642770_644693_-	PrkA family serine protein kinase	NA	NA	NA	NA
WP_003085081.1\|644971_645304_-	thiosulfate sulfurtransferase GlpE	NA	NA	NA	NA
WP_003113213.1\|645347_646199_-	symmetrical bis(5'-nucleosyl)-tetraphosphatase	A0A2H4J0P0	uncultured_Caudovirales_phage	1.1e-08	33.3
WP_003085085.1\|646198_646579_-	Co2+/Mg2+ efflux protein ApaG	NA	NA	NA	NA
WP_023874866.1\|646615_647422_-	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	NA	NA	NA	NA
WP_021263063.1\|647537_648524_-	4-hydroxythreonine-4-phosphate dehydrogenase PdxA	NA	NA	NA	NA
WP_003115345.1\|648520_649813_-	peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA
WP_023092353.1\|649793_652586_-	LPS-assembly protein LptD	NA	NA	NA	NA
WP_003137370.1\|652712_653729_+	phosphotransferase	NA	NA	NA	NA
WP_003117959.1\|653725_654400_+	nucleotidyltransferase family protein	NA	NA	NA	NA
WP_003085097.1\|654401_655160_+	DnaJ domain-containing protein	NA	NA	NA	NA
WP_023874867.1\|655160_656222_-	DUF3530 family protein	NA	NA	NA	NA
WP_023874868.1\|656373_658767_+	PAS domain S-box protein	NA	NA	NA	NA
WP_003099542.1\|658815_659445_+	response regulator transcription factor	NA	NA	NA	NA
WP_023874869.1\|659573_660608_+	extracellular solute-binding protein	NA	NA	NA	NA
WP_003085109.1\|660841_661951_+	polyamine ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	7.8e-28	34.4
WP_003109043.1\|662006_663053_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_014604087.1\|663167_664415_+	ABC transporter permease	NA	NA	NA	NA
WP_003085119.1\|664520_665351_+	ABC transporter permease	NA	NA	NA	NA
WP_023874870.1\|665474_666149_+	ribulose-phosphate 3-epimerase	NA	NA	NA	NA
WP_003085124.1\|666148_666967_+	phosphoglycolate phosphatase	NA	NA	NA	NA
WP_021263057.1\|667039_668518_+	anthranilate synthase component I	NA	NA	NA	NA
WP_003085128.1\|668704_669019_-	transcription regulatory protein PrtN	NA	NA	NA	NA
WP_003085129.1\|669118_669889_-	helix-turn-helix transcriptional regulator	A0A1B0Z078	Pseudomonas_phage	6.1e-72	59.0
WP_003085132.1\|670346_670547_+	repressor PtrB	W6ATC1	Enterobacter_phage	3.7e-05	58.3
WP_023874871.1\|670594_670954_+	hypothetical protein	NA	NA	NA	NA
WP_003137382.1\|671316_671766_+\|holin	holin	B5TK61	Pseudomonas_phage	5.0e-26	53.3
WP_003085139.1\|671787_672303_+	hypothetical protein	A0A2H4J881	uncultured_Caudovirales_phage	4.1e-32	42.9
WP_003085141.1\|672299_672857_+\|plate	phage baseplate assembly protein V	A0A2H4JG06	uncultured_Caudovirales_phage	4.6e-45	71.1
WP_023874872.1\|673009_673336_+\|plate	phage baseplate protein	A0A2H4JA09	uncultured_Caudovirales_phage	3.5e-29	58.3
WP_003085151.1\|673332_674220_+	bacteriophage protein	S4TNY7	Salmonella_phage	5.3e-88	59.8
WP_003129210.1\|674212_674746_+\|tail	phage tail protein I	Q9ZXK7	Pseudomonas_virus	6.7e-62	64.0
WP_023874873.1\|674747_676865_+	hypothetical protein	Q9ZXK6	Pseudomonas_virus	1.4e-224	52.7
WP_016852415.1\|676872_677313_+	hypothetical protein	NA	NA	NA	NA
WP_003109051.1\|677355_678516_+\|tail	phage tail sheath family protein	Q38068	Phage_PS17	2.7e-188	83.4
WP_003085175.1\|678528_679032_+\|tail	phage major tail tube protein	Q7M2A5	Pseudomonas_phage	8.0e-65	73.5
WP_023874874.1\|679046_679391_+\|tail	phage tail assembly protein	NA	NA	NA	NA
WP_023874875.1\|679560_681798_+\|tail	phage tail length tape measure protein	NA	NA	NA	NA
WP_010793486.1\|681807_682680_+	hypothetical protein	A0A2H4J875	uncultured_Caudovirales_phage	1.3e-75	51.7
WP_003101635.1\|682654_682861_+	hypothetical protein	A0A2H4J9Z9	uncultured_Caudovirales_phage	2.3e-18	64.2
WP_023874876.1\|682918_683908_+	phage late control D family protein	A0A2H4JBF6	uncultured_Caudovirales_phage	1.4e-105	55.5
WP_003161924.1\|683940_684570_+	glycoside hydrolase family 19 protein	A0A125RNP1	Pseudomonas_phage	5.5e-87	78.5
WP_003121852.1\|684566_684929_+	hypothetical protein	H2BDA0	Pseudomonas_phage	4.2e-15	47.9
WP_003118919.1\|684925_685183_+	hypothetical protein	A0A125RNP3	Pseudomonas_phage	8.3e-18	64.6
WP_003113190.1\|685498_685993_+	hypothetical protein	A0A286S1Q8	Klebsiella_phage	1.4e-45	56.5
WP_003113189.1\|686004_686352_+	hypothetical protein	NA	NA	NA	NA
WP_003113188.1\|686381_686636_+	hypothetical protein	A0A2H4PI34	Pseudomonas_phage	6.3e-10	38.4
WP_003117970.1\|686682_688521_+\|tail	phage tail tape measure protein	A0A0S2SYD9	Pseudomonas_phage	3.4e-28	35.8
WP_003113186.1\|688513_688855_+\|tail	phage tail protein	Q6UAW6	Klebsiella_phage	1.4e-17	40.0
WP_023874877.1\|688862_689558_+\|tail	phage minor tail protein L	A0A1B0VNE0	Pseudomonas_phage	4.3e-69	50.2
WP_003113184.1\|689560_690331_+	hypothetical protein	A0A2D1GNP8	Pseudomonas_phage	4.2e-81	55.6
WP_023874878.1\|690385_690988_+\|tail	tail assembly protein	A0A1V0E8A0	Vibrio_phage	4.9e-53	57.3
WP_023874879.1\|691046_694661_+\|tail	phage tail protein	A0A0S2SYC5	Pseudomonas_phage	0.0e+00	54.9
WP_031627675.1\|694896_695685_+	hypothetical protein	NA	NA	NA	NA
WP_009315198.1\|695708_696800_+	hypothetical protein	A0A0S2SY45	Pseudomonas_phage	2.1e-46	36.6
WP_023085656.1\|696799_697135_+	hypothetical protein	NA	NA	NA	NA
WP_003118928.1\|697115_697346_+	hypothetical protein	A0A1W6JT87	Pseudomonas_phage	6.7e-19	65.3
WP_009315200.1\|697441_698494_+	hypothetical protein	A0A0H5AXZ9	Pseudomonas_phage	2.7e-62	52.5
WP_003113177.1\|698493_698796_+	hypothetical protein	A0A0H5B141	Pseudomonas_phage	4.4e-34	71.0
WP_003113176.1\|698792_699023_+	hypothetical protein	C8ZKF3	Pseudomonas_phage	8.2e-25	71.6
WP_003117978.1\|699440_700046_+	aminodeoxychorismate/anthranilate synthase component II	A0A0P0IKJ1	Acinetobacter_phage	2.1e-75	66.3
WP_003085203.1\|700047_701097_+	anthranilate phosphoribosyltransferase	A0A0N7IRD9	Acinetobacter_phage	1.8e-111	57.8
WP_003085205.1\|701093_701930_+	indole-3-glycerol phosphate synthase TrpC	A0A0P0IR83	Acinetobacter_phage	2.1e-70	56.9
WP_003085214.1\|701991_702636_-	cAMP-activated global transcriptional regulator CRP	NA	NA	NA	NA
WP_003085219.1\|702907_703330_+	OsmC family protein	NA	NA	NA	NA
WP_003085223.1\|703649_704444_+	adenosylmethionine decarboxylase	NA	NA	NA	NA
WP_003085224.1\|704498_705146_-	2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinone monooxygenase	NA	NA	NA	NA
WP_003085225.1\|705245_705584_-	histidine triad nucleotide-binding protein	NA	NA	NA	NA
WP_003121853.1\|705662_707144_+	AAA family ATPase	U5XJW0	Phormidium_phage	3.9e-67	33.8
WP_003161912.1\|707183_707984_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_003161911.1\|708044_709121_-	DUF805 domain-containing protein	NA	NA	NA	NA
WP_023874881.1\|709242_710211_-	nitronate monooxygenase	NA	NA	NA	NA
WP_003120828.1\|710227_710650_-	protoporphyrinogen oxidase HemJ	NA	NA	NA	NA
WP_023874882.1\|710940_711975_+	N-acetyl-gamma-glutamyl-phosphate reductase	NA	NA	NA	NA
WP_003085249.1\|711974_712694_+	hypothetical protein	NA	NA	NA	NA
WP_003120826.1\|712694_713117_+	polymer-forming cytoskeletal protein	NA	NA	NA	NA
WP_003085254.1\|713194_713545_+	iron-sulfur cluster insertion protein ErpA	A0A2H4N7M3	Lake_Baikal_phage	3.0e-26	53.2
WP_023874883.1\|713598_714690_-	anhydro-N-acetylmuramic acid kinase	NA	NA	NA	NA
WP_003129241.1\|714692_716036_-	peptidoglycan DD-metalloendopeptidase family protein	O03937	Lactobacillus_phage	3.0e-18	44.1
WP_003113167.1\|716320_717520_+\|tRNA	tyrosine--tRNA ligase	NA	NA	NA	NA

DBSCAN-SWA_2

1449926 : 1458955

Bacillus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003098558.1\|1449926_1450562_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	1.0e-40	52.3
WP_023436003.1\|1450607_1451501_+	peptidoglycan DD-metalloendopeptidase family protein	A0A0S2SXL7	Bacillus_phage	3.0e-06	34.3
WP_003113871.1\|1451605_1452610_+	RNA polymerase sigma factor RpoS	G8CLC7	Synechococcus_phage	7.0e-36	37.3
WP_003092272.1\|1453036_1453360_-	ferredoxin family protein	NA	NA	NA	NA
WP_003113873.1\|1453426_1455994_-	DNA mismatch repair protein MutS	A0A1V0SGG8	Hokovirus	3.2e-24	22.1
WP_021265158.1\|1456119_1457127_-	TolB family protein	NA	NA	NA	NA
WP_003092262.1\|1457274_1457781_+	CinA family protein	B5TK85	Pseudomonas_phage	8.1e-57	76.0
WP_003092260.1\|1457914_1458955_+	recombinase RecA	A0A0S2MVG1	Bacillus_phage	1.5e-113	59.5

DBSCAN-SWA_3

2569702 : 2576596

uncultured_Caudovirales_phage(83.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003097631.1\|2569702_2570983_+\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	8.2e-98	45.4
WP_003131135.1\|2570984_2572382_+	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA
WP_003097628.1\|2572386_2573361_-	glutathione S-transferase family protein	NA	NA	NA	NA
WP_023095480.1\|2573448_2574432_-	glycosyl transferase family protein	A0A2H4JBY5	uncultured_Caudovirales_phage	1.2e-141	74.0
WP_003090393.1\|2574428_2574764_-	TusE/DsrC/DsvC family sulfur relay protein	A0A2H4J8B6	uncultured_Caudovirales_phage	3.3e-38	69.4
WP_023875214.1\|2574760_2575066_-	sulfurtransferase complex subunit TusB	NA	NA	NA	NA
WP_003090389.1\|2575065_2575425_-	sulfurtransferase complex subunit TusC	A0A2H4J8C0	uncultured_Caudovirales_phage	1.4e-34	61.7
WP_003090387.1\|2575421_2575817_-	sulfurtransferase complex subunit TusD	A0A2H4JA39	uncultured_Caudovirales_phage	2.7e-47	72.1
WP_003090386.1\|2575927_2576596_-	Bax inhibitor-1/YccA family protein	A0A2H4JFM9	uncultured_Caudovirales_phage	1.5e-90	82.1

DBSCAN-SWA_4

3386706 : 3438356

Pseudomonas_phage(76.19%)

head,tail,terminase,integrase,lysis,capsid

attL 3381748:3381763|attR 3438083:3438098

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3381748:3381763	attL	NA	NA	NA	NA
WP_023875398.1\|3386706_3389442_-	hypothetical protein	H2BDC9	Pseudomonas_virus	0.0e+00	85.4
WP_023875399.1\|3389413_3389821_-	hypothetical protein	B5WZT7	Pseudomonas_phage	9.3e-72	97.8
WP_023875400.1\|3389825_3390314_-	DUF1833 family protein	B5WZT6	Pseudomonas_phage	9.1e-90	99.4
WP_023875401.1\|3390310_3390775_-	hypothetical protein	B5WZT5	Pseudomonas_phage	2.1e-88	99.4
WP_023875402.1\|3390771_3393525_-\|tail	tail tape measure protein	A0A0S2SYD9	Pseudomonas_phage	2.7e-90	39.9
WP_023875403.1\|3393869_3394232_-	lambda gpG-like protein	B5WZT2	Pseudomonas_phage	3.3e-60	98.3
WP_023875404.1\|3394241_3394736_-\|tail	major tail subunit	A0A1V0E8B3	Vibrio_phage	1.3e-46	56.8
WP_023875405.1\|3394923_3395295_-	DUF3168 domain-containing protein	B5WZT0	Pseudomonas_phage	5.5e-63	92.7
WP_015994276.1\|3395294_3395741_-	hypothetical protein	B5WZS9	Pseudomonas_phage	6.4e-66	100.0
WP_079279159.1\|3395733_3396348_-	methyltransferase domain-containing protein	B5WZS8	Pseudomonas_phage	5.9e-110	87.3
WP_041025632.1\|3396298_3397111_-	hypothetical protein	B5WZS7	Pseudomonas_phage	6.7e-162	98.9
WP_041025633.1\|3397107_3397677_-	hypothetical protein	B5WZS6	Pseudomonas_phage	2.1e-106	95.2
WP_144096430.1\|3397676_3397901_-	hypothetical protein	NA	NA	NA	NA
WP_023875411.1\|3397893_3398235_-\|head	phage head closure protein	B5WZS5	Pseudomonas_phage	4.2e-57	96.5
WP_015994271.1\|3398244_3398619_-\|head,tail	phage gp6-like head-tail connector protein	B5WZS4	Pseudomonas_phage	4.6e-65	100.0
WP_023875412.1\|3398615_3399620_-	hypothetical protein	B5WZS3	Pseudomonas_phage	7.6e-91	75.2
WP_023875414.1\|3400990_3401209_-	hypothetical protein	NA	NA	NA	NA
WP_023875415.1\|3401211_3401433_-	hypothetical protein	B5WZS0	Pseudomonas_phage	2.9e-19	89.5
WP_023875417.1\|3401495_3403499_-\|capsid	phage major capsid protein	S4TNE3	Salmonella_phage	8.2e-153	48.2
WP_023875419.1\|3403558_3405076_-\|terminase	terminase	B5WZR8	Pseudomonas_phage	1.5e-292	99.4
WP_023875420.1\|3405054_3405480_-	hypothetical protein	B5WZR7	Pseudomonas_phage	1.0e-73	99.3
WP_041025684.1\|3405637_3405991_-	HNH endonuclease	B5WZZ4	Pseudomonas_phage	4.3e-65	96.5
WP_023875423.1\|3406223_3406679_-\|lysis	lysis protein Rz	W6MYB3	Pseudomonas_phage	6.1e-64	93.6
WP_023875424.1\|3406671_3406920_-	hypothetical protein	A0A0H5AWC3	Pseudomonas_phage	1.3e-20	51.9
WP_023875426.1\|3407102_3407519_-	cell wall hydrolase	W6MVH4	Pseudomonas_phage	1.5e-77	98.6
WP_023875428.1\|3408562_3408961_-	antitermination protein Q	A0A1W6JTD2	Pseudomonas_phage	4.1e-32	52.0
WP_023875429.1\|3408957_3410091_-	hypothetical protein	A0A220IHC1	Escherichia_phage	2.0e-79	42.1
WP_023875430.1\|3410090_3410378_-	DUF3310 domain-containing protein	A0A0E3GMR1	Enterobacter_phage	3.4e-12	46.8
WP_023875431.1\|3410508_3410973_-	hypothetical protein	Q858D2	Salmonella_phage	9.7e-57	73.2
WP_023875432.1\|3410969_3411185_-	hypothetical protein	NA	NA	NA	NA
WP_023875433.1\|3411181_3411415_-	hypothetical protein	NA	NA	NA	NA
WP_158476993.1\|3411664_3412558_-	hypothetical protein	B4UTX2	Rhizobium_phage	3.9e-14	39.4
WP_023875435.1\|3412554_3412857_-	DUF1364 family protein	A0A1J0GVP4	Pseudoalteromonas_phage	2.2e-17	50.5
WP_023875436.1\|3412853_3413123_-	hypothetical protein	B5WZY5	Pseudomonas_phage	2.7e-19	54.7
WP_023875437.1\|3413119_3413521_-	hypothetical protein	A0A059VG13	Pseudomonas_phage	9.9e-34	52.8
WP_023875438.1\|3413513_3413744_-	hypothetical protein	NA	NA	NA	NA
WP_023875439.1\|3413736_3413952_-	hypothetical protein	A0A125RNK4	Pseudomonas_phage	9.0e-34	93.0
WP_031637374.1\|3414064_3415438_-	AAA family ATPase	A0A125RNK2	Pseudomonas_phage	2.4e-252	99.8
WP_023114260.1\|3415461_3416256_-	phage replication protein O domain	W6MYB0	Pseudomonas_phage	5.3e-47	65.8
WP_023114259.1\|3416633_3416822_-	hypothetical protein	B5WZX7	Pseudomonas_phage	3.6e-10	58.1
WP_023113651.1\|3416835_3417015_-	hypothetical protein	A0A0S2SYB8	Pseudomonas_phage	6.6e-14	66.1
WP_023875441.1\|3417115_3417826_+	LexA family transcriptional regulator	Q6J1N3	Burkholderia_virus	1.7e-31	38.4
WP_023875442.1\|3418276_3419446_+	glycosyltransferase	NA	NA	NA	NA
WP_023875443.1\|3419621_3419885_+	hypothetical protein	NA	NA	NA	NA
WP_023875444.1\|3419989_3420478_+	DUF1566 domain-containing protein	H2BDH2	Pseudomonas_virus	7.8e-73	86.4
WP_051429920.1\|3420673_3421180_+	hypothetical protein	A0A0A0YR68	Pseudomonas_phage	1.9e-29	48.3
WP_023875446.1\|3421217_3421574_+	four helix bundle protein	NA	NA	NA	NA
WP_079279161.1\|3421846_3422986_+	RNA-directed DNA polymerase	A0A0N7AE80	Bacillus_phage	8.5e-46	34.4
WP_034019825.1\|3423007_3423217_+	DUF551 domain-containing protein	B5WZX3	Pseudomonas_phage	9.1e-31	82.6
WP_023875448.1\|3423233_3423503_+	hypothetical protein	A0A2H4JGG9	uncultured_Caudovirales_phage	1.5e-17	57.1
WP_079279185.1\|3423988_3424501_+	hypothetical protein	J7I0S8	Pseudomonas_phage	1.5e-63	66.5
WP_023435938.1\|3424518_3424938_+	hypothetical protein	A0A0S2SY96	Pseudomonas_phage	2.1e-71	97.8
WP_023083004.1\|3424934_3425213_+	hypothetical protein	NA	NA	NA	NA
WP_023875451.1\|3425209_3425893_+	HNH endonuclease	A0A2I7R2R0	Vibrio_phage	5.6e-29	39.7
WP_023875452.1\|3425889_3426168_+	hypothetical protein	H2BDG8	Pseudomonas_virus	1.5e-17	61.1
WP_023875453.1\|3426287_3426965_+	DNA cytosine methyltransferase	A0A0H5AU88	Pseudomonas_phage	4.4e-90	71.6
WP_023875455.1\|3427309_3428101_+	single-stranded DNA-binding protein	A0A125RNR3	Pseudomonas_phage	2.2e-56	58.9
WP_023875456.1\|3428097_3428376_+	hypothetical protein	A0A0H5AW97	Pseudomonas_phage	1.1e-23	71.4
WP_023875457.1\|3428439_3429039_+	hypothetical protein	A0A0U4JEE7	Pseudomonas_phage	1.3e-109	99.0
WP_144096432.1\|3429201_3429426_+	hypothetical protein	A0A0S2SYB6	Pseudomonas_phage	1.3e-35	97.3
WP_144096434.1\|3430712_3430940_+	hypothetical protein	NA	NA	NA	NA
WP_023875460.1\|3430932_3431490_+	hypothetical protein	A0A1B0YZW8	Pseudomonas_phage	1.8e-81	86.6
WP_023875461.1\|3431482_3431836_+	hypothetical protein	A0A0U4K5D6	Pseudomonas_phage	1.7e-45	71.8
WP_023875462.1\|3431816_3432311_+	DUF1643 domain-containing protein	B5WZV8	Pseudomonas_phage	2.4e-98	99.4
WP_023875463.1\|3432355_3432673_+	hypothetical protein	A0A0U4JNZ9	Pseudomonas_phage	2.9e-52	94.3
WP_023875464.1\|3432876_3433362_+	hypothetical protein	A0A0A1IW26	Pseudomonas_phage	1.5e-89	99.4
WP_023875465.1\|3433364_3433637_+	hypothetical protein	A0A0A1IVN6	Pseudomonas_phage	6.3e-32	75.0
WP_123822976.1\|3433637_3433841_+	hypothetical protein	D4FUM8	Pseudomonas_phage	6.5e-34	100.0
WP_041025692.1\|3434367_3434607_+	hypothetical protein	B5WZV1	Pseudomonas_phage	3.8e-17	60.8
WP_023875468.1\|3434606_3434801_+	hypothetical protein	B5WZV0	Pseudomonas_phage	3.0e-28	87.5
WP_023875470.1\|3434781_3435237_+	hypothetical protein	A0A0U4IIZ7	Pseudomonas_phage	2.9e-82	99.3
WP_023875471.1\|3435518_3436736_+\|integrase	site-specific integrase	A0A125RNP5	Pseudomonas_phage	1.1e-229	98.8
WP_003111315.1\|3436766_3438356_+	ABC-F family ATPase	A0A2K9L0W2	Tupanvirus	5.9e-61	28.3
3438083:3438098	attR	NA	NA	NA	NA

DBSCAN-SWA_5

4654032 : 4714399

Pseudomonas_phage(92.86%)

portal,holin,protease,terminase,integrase,lysis

attL 4673935:4673960|attR 4714404:4714429

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_023112307.1\|4654032_4656225_+\|holin	phospholipase C, phosphocholine-specific	NA	NA	NA	NA
WP_023112308.1\|4656241_4656865_+	phospholipase C accessory protein PlcR	NA	NA	NA	NA
WP_003085828.1\|4656952_4658173_+	glycosyltransferase family 1 protein	NA	NA	NA	NA
WP_003085826.1\|4658176_4659136_-	DegV family protein	NA	NA	NA	NA
WP_003085824.1\|4659326_4660439_-	NADH:flavin oxidoreductase	NA	NA	NA	NA
WP_023875706.1\|4660479_4661070_-	TetR family transcriptional regulator	NA	NA	NA	NA
WP_003109429.1\|4661220_4661703_-	glutathione peroxidase	NA	NA	NA	NA
WP_003085816.1\|4661908_4662394_-	peptidylprolyl isomerase	NA	NA	NA	NA
WP_003109430.1\|4662362_4662701_+	DUF3565 domain-containing protein	NA	NA	NA	NA
WP_023875707.1\|4662700_4663885_+	acetate kinase	NA	NA	NA	NA
WP_003085813.1\|4663947_4666062_+	phosphate acetyltransferase	NA	NA	NA	NA
WP_003085811.1\|4666188_4667103_+	acyltransferase	NA	NA	NA	NA
WP_003085808.1\|4667172_4667886_-	OmpA family protein	NA	NA	NA	NA
WP_003085806.1\|4667991_4668633_-	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_023875708.1\|4668734_4669754_-	AraC family transcriptional regulator	NA	NA	NA	NA
WP_003134328.1\|4669878_4670712_+	metal-dependent hydrolase	NA	NA	NA	NA
WP_003085798.1\|4670846_4671788_-	alpha/beta hydrolase	A0A1D8EUH4	Mycobacterium_phage	4.4e-08	33.3
WP_023875709.1\|4671896_4672580_-	TetR family transcriptional regulator	NA	NA	NA	NA
WP_003109435.1\|4672667_4673546_+	hypothetical protein	NA	NA	NA	NA
4673935:4673960	attL	NA	NA	NA	NA
WP_023875710.1\|4674061_4674307_-	hypothetical protein	A0A1W6JT87	Pseudomonas_phage	3.9e-33	96.0
WP_023127387.1\|4674303_4674615_-	hypothetical protein	A0A1W6JTB1	Pseudomonas_phage	1.6e-52	100.0
WP_023875712.1\|4674614_4675598_-	hypothetical protein	A0A1W6JTA8	Pseudomonas_phage	1.1e-177	93.3
WP_023086976.1\|4675590_4675872_-	hypothetical protein	A0A1W6JTD4	Pseudomonas_phage	3.6e-46	100.0
WP_023875713.1\|4675871_4676432_-	hypothetical protein	A0A0U4JIY3	Pseudomonas_phage	2.5e-99	98.9
WP_003159486.1\|4676436_4676628_-	hypothetical protein	A0A1B0Z2L3	Pseudomonas_phage	7.0e-30	100.0
WP_023875714.1\|4676620_4677208_-	hypothetical protein	A0A1W6JT86	Pseudomonas_phage	7.8e-104	95.9
WP_023875715.1\|4677237_4678896_-	hypothetical protein	A0A0A0YRR5	Pseudomonas_phage	0.0e+00	98.0
WP_015980914.1\|4678892_4679297_-	hypothetical protein	A0A0A0YR47	Pseudomonas_phage	4.0e-67	100.0
WP_023875716.1\|4679308_4679854_-	hypothetical protein	A0A0A0YWE1	Pseudomonas_phage	4.7e-95	95.6
WP_023875717.1\|4679853_4680264_-	hypothetical protein	A0A1B0YZV0	Pseudomonas_phage	6.5e-65	97.0
WP_023875718.1\|4680266_4681964_-	hypothetical protein	A0A1B0YZV2	Pseudomonas_phage	0.0e+00	100.0
WP_023875719.1\|4681963_4682485_-	hypothetical protein	A0A1B0YZV5	Pseudomonas_phage	2.6e-98	100.0
WP_023875721.1\|4682524_4685008_-	tape measure protein	A0A1B0YZV6	Pseudomonas_phage	0.0e+00	99.3
WP_021205305.1\|4685110_4685413_-	hypothetical protein	A0A1W6JT80	Pseudomonas_phage	2.0e-47	98.0
WP_023875722.1\|4685474_4686116_-	prepilin-type N-terminal cleavage/methylation domain-containing protein	A0A1W6JT76	Pseudomonas_phage	5.5e-111	96.2
WP_023875724.1\|4686197_4686950_-	hypothetical protein	A0A1W6JT83	Pseudomonas_phage	1.4e-137	99.6
WP_015980908.1\|4686951_4687146_-	hypothetical protein	A0A1W6JT79	Pseudomonas_phage	1.5e-27	98.4
WP_010791969.1\|4687149_4687620_-	hypothetical protein	A0A1W6JT75	Pseudomonas_phage	2.2e-88	100.0
WP_010791970.1\|4687616_4687946_-	hypothetical protein	A0A1W6JT71	Pseudomonas_phage	3.1e-57	100.0
WP_003129701.1\|4687942_4688260_-	DUF2190 family protein	A0A1W6JT93	Pseudomonas_phage	4.6e-50	100.0
WP_019396609.1\|4688326_4690420_-\|protease	Clp protease ClpP	A0A1B0YZU0	Pseudomonas_phage	0.0e+00	98.7
WP_023875725.1\|4690379_4692026_-\|portal	phage portal protein	A0A0A0YUB7	Pseudomonas_phage	0.0e+00	99.8
WP_003159476.1\|4692025_4692241_-	hypothetical protein	A0A1B0YZU1	Pseudomonas_phage	8.5e-32	100.0
WP_023875726.1\|4692231_4694211_-\|terminase	phage terminase large subunit family protein	A0A1W6JT68	Pseudomonas_phage	0.0e+00	98.6
WP_023114595.1\|4694182_4694728_-	hypothetical protein	A0A1W6JT69	Pseudomonas_phage	3.1e-94	100.0
WP_023114596.1\|4694847_4695591_-	hypothetical protein	A0A1B0Z000	Pseudomonas_phage	1.1e-134	99.2
WP_023875727.1\|4695587_4696058_-\|lysis	lysis protein Rz	A0A1B0Z001	Pseudomonas_phage	1.4e-74	95.5
WP_023875728.1\|4696054_4696297_-	hypothetical protein	A0A0H5AWC3	Pseudomonas_phage	3.2e-19	51.9
WP_023875729.1\|4696293_4696911_-	glycoside hydrolase family 19 protein	A0A0U4JP23	Pseudomonas_phage	3.9e-106	92.2
WP_003129668.1\|4696907_4697240_-\|holin	phage holin, lambda family	A0A1B0YZZ1	Pseudomonas_phage	5.1e-44	100.0
WP_003098540.1\|4697439_4697622_+	type II toxin-antitoxin system HicA family toxin	A0A2H4JDU5	uncultured_Caudovirales_phage	2.5e-08	55.0
WP_023875730.1\|4697668_4698097_+	transcriptional regulator	Q7Y3V7	Yersinia_phage	1.0e-28	49.6
WP_004353175.1\|4698529_4698919_-	hypothetical protein	A0A1W6JTD2	Pseudomonas_phage	2.2e-70	99.2
WP_015648203.1\|4698915_4699194_-	hypothetical protein	A0A1W6JTC1	Pseudomonas_phage	2.3e-45	100.0
WP_023875731.1\|4699190_4699880_-	serine/threonine protein phosphatase	A0A0A0YWI7	Pseudomonas_phage	5.2e-131	97.8
WP_023124260.1\|4699876_4700248_-	hypothetical protein	A0A0A0YQ44	Pseudomonas_phage	2.7e-49	99.0
WP_023875733.1\|4700244_4701675_-	replicative DNA helicase	A0A0A0YUG7	Pseudomonas_phage	1.4e-258	96.2
WP_023875734.1\|4701671_4702460_-	ATP-binding protein	A0A0A0YRV1	Pseudomonas_phage	3.1e-148	100.0
WP_023875735.1\|4703313_4703544_-	hypothetical protein	A0A0A0YWI1	Pseudomonas_phage	5.9e-39	97.4
WP_023875736.1\|4703540_4704302_-	DNA-binding protein	A0A1W6JTB2	Pseudomonas_phage	1.1e-134	97.6
WP_023132433.1\|4704298_4704634_-	hypothetical protein	NA	NA	NA	NA
WP_010791989.1\|4704626_4704956_-	hypothetical protein	NA	NA	NA	NA
WP_023875737.1\|4704952_4705249_-	hypothetical protein	NA	NA	NA	NA
WP_010791991.1\|4705241_4705550_-	hypothetical protein	NA	NA	NA	NA
WP_023875738.1\|4705546_4705855_-	hypothetical protein	A0A1W6JTC0	Pseudomonas_phage	2.4e-40	83.3
WP_023875739.1\|4705851_4706130_-	hypothetical protein	A0A1W6JTC3	Pseudomonas_phage	1.9e-39	96.7
WP_019396628.1\|4706126_4706477_-	hypothetical protein	NA	NA	NA	NA
WP_079279166.1\|4707005_4707344_-	Cro/Cl family transcriptional regulator	A0A2H4J1L8	uncultured_Caudovirales_phage	2.2e-10	57.4
WP_019486516.1\|4707380_4708121_+	helix-turn-helix domain-containing protein	A0A1W6JTC8	Pseudomonas_phage	6.5e-55	66.2
WP_023875741.1\|4708186_4708579_+	response regulator transcription factor	A0A1W6JTA9	Pseudomonas_phage	6.5e-30	62.5
WP_041025642.1\|4708581_4708815_+	hypothetical protein	A0A0A0YQ28	Pseudomonas_phage	4.3e-37	98.7
WP_023875743.1\|4708914_4709169_+	hypothetical protein	A0A0A0YUF2	Pseudomonas_phage	1.1e-38	98.8
WP_003085692.1\|4709165_4710002_+	prohibitin family protein	A0A0A0YRT7	Pseudomonas_phage	1.0e-128	100.0
WP_023875744.1\|4710043_4710274_+	Arc family DNA-binding protein	A0A1W6JTB4	Pseudomonas_phage	1.2e-31	92.1
WP_003085687.1\|4710276_4710612_+	hypothetical protein	A0A1W6JTA6	Pseudomonas_phage	1.2e-53	99.1
WP_003085682.1\|4711833_4712025_+	hypothetical protein	A0A0A0YQ21	Pseudomonas_phage	9.2e-30	100.0
WP_023875747.1\|4712021_4712741_+	hypothetical protein	A0A1W6JTE0	Pseudomonas_phage	7.8e-122	92.5
WP_023121756.1\|4712733_4713063_+	hypothetical protein	A0A1W6JT94	Pseudomonas_phage	2.8e-58	100.0
WP_004353155.1\|4713205_4714399_+\|integrase	site-specific integrase	A0A1W6JTA0	Pseudomonas_phage	6.9e-208	96.3
4714404:4714429	attR	NA	NA	NA	NA

DBSCAN-SWA_6

5469349 : 5504573

Pseudomonas_phage(66.67%)

coat,integrase,tRNA

attL 5496318:5496377|attR 5507906:5507987

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003099340.1\|5469349_5469898_+\|coat	spore coat U domain-containing protein	NA	NA	NA	NA
WP_003135089.1\|5469928_5470462_+\|coat	spore coat U domain-containing protein	NA	NA	NA	NA
WP_023875998.1\|5470461_5471004_+\|coat	spore coat U domain-containing protein	NA	NA	NA	NA
WP_021264092.1\|5471022_5471811_+	molecular chaperone	NA	NA	NA	NA
WP_009316218.1\|5471827_5474203_+	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA
WP_003099330.1\|5474199_5475147_+\|coat	spore coat U domain-containing protein	NA	NA	NA	NA
WP_003099328.1\|5475148_5476522_-	MFS transporter	NA	NA	NA	NA
WP_023875999.1\|5476801_5477824_-	ferrochelatase	NA	NA	NA	NA
WP_004355228.1\|5477820_5478738_-	TIGR01777 family protein	NA	NA	NA	NA
WP_003094987.1\|5479151_5480135_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_023876000.1\|5480287_5481244_+	DUF523 and DUF1722 domain-containing protein	NA	NA	NA	NA
WP_003141623.1\|5481253_5482153_+	MerR family transcriptional regulator	Q9EYF2	Enterobacteria_phage	8.5e-17	39.1
WP_004355239.1\|5482149_5483595_+	deoxyribodipyrimidine photo-lyase	A0A167RC11	Powai_lake_megavirus	1.4e-45	28.0
WP_003094992.1\|5483720_5484242_-	acyloxyacyl hydrolase	A0A2H4J0I5	uncultured_Caudovirales_phage	1.0e-59	70.4
WP_003099300.1\|5484375_5485173_-	glutamate racemase	NA	NA	NA	NA
WP_009316212.1\|5485162_5485921_-	molybdopterin-synthase adenylyltransferase MoeB	NA	NA	NA	NA
WP_003114694.1\|5485914_5486745_-	peptide chain release factor N(5)-glutamine methyltransferase	NA	NA	NA	NA
WP_003099290.1\|5486746_5487829_-	peptide chain release factor 1	A0A0S4KWG0	Pseudomonas_phage	5.6e-07	48.3
WP_003095001.1\|5487846_5489115_-\|tRNA	glutamyl-tRNA reductase	NA	NA	NA	NA
WP_023876003.1\|5489258_5491031_+	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_003095005.1\|5491035_5491653_+	lipoprotein localization protein LolB	NA	NA	NA	NA
WP_009316211.1\|5491654_5492503_+	4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase	NA	NA	NA	NA
WP_003099281.1\|5492669_5493611_+	ribose-phosphate pyrophosphokinase	A0A1V0SHF7	Hokovirus	4.1e-46	35.4
WP_003095013.1\|5493727_5494342_+	50S ribosomal protein L25/general stress protein Ctc	NA	NA	NA	NA
WP_003099278.1\|5494382_5494967_+\|tRNA	aminoacyl-tRNA hydrolase	NA	NA	NA	NA
WP_023876004.1\|5495007_5496108_+	redox-regulated ATPase YchF	NA	NA	NA	NA
5496318:5496377	attL	NA	NA	NA	NA
WP_023084827.1\|5496426_5496864_-	hypothetical protein	NA	NA	NA	NA
WP_003162405.1\|5496910_5497918_-\|integrase	tyrosine-type recombinase/integrase	F1BUS9	Erwinia_phage	3.7e-77	47.1
WP_004352686.1\|5497914_5499207_-	hypothetical protein	Q56VN8	Pseudomonas_phage	1.8e-241	92.3
WP_023098115.1\|5499436_5500711_-	hypothetical protein	Q56VN9	Pseudomonas_phage	2.6e-200	87.3
WP_003114150.1\|5500714_5501071_-	DUF2523 domain-containing protein	Q56VP0	Pseudomonas_phage	7.9e-59	100.0
WP_023876005.1\|5501075_5502353_-	hypothetical protein	Q56VP1	Pseudomonas_phage	2.8e-45	56.0
WP_003125072.1\|5502500_5502749_-\|coat	phage coat protein B	Q56VP2	Pseudomonas_phage	2.0e-32	92.7
WP_003115979.1\|5502761_5503013_-	hypothetical protein	NA	NA	NA	NA
WP_003115130.1\|5503025_5503118_-	hypothetical protein	Q56VP4	Pseudomonas_phage	7.3e-09	100.0
WP_003140508.1\|5503134_5503569_-	hypothetical protein	Q56VP5	Pseudomonas_phage	3.8e-63	100.0
WP_041025660.1\|5503703_5504081_-	hypothetical protein	Q56VP6	Pseudomonas_phage	2.8e-62	98.4
WP_034044419.1\|5504378_5504573_-	hypothetical protein	Q56VP8	Pseudomonas_phage	1.1e-30	98.4
5507906:5507987	attR	NA	NA	NA	NA

DBSCAN-SWA_7

6029797 : 6118002

Pseudomonas_virus(79.55%)

portal,head,holin,tRNA,protease,tail,terminase,transposase,integrase,lysis,capsid,plate

attL 6060491:6060507|attR 6126651:6126667

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_019485018.1\|6029797_6031252_-\|tRNA	tRNA 4-thiouridine(8) synthase ThiI	NA	NA	NA	NA
WP_003096016.1\|6031588_6032998_+	glutamate--ammonia ligase	NA	NA	NA	NA
WP_023876104.1\|6033145_6033550_+	hypothetical protein	NA	NA	NA	NA
WP_003096022.1\|6033546_6035754_-	mechanosensitive ion channel family protein	NA	NA	NA	NA
WP_021204967.1\|6036041_6036563_+	DUF4124 domain-containing protein	NA	NA	NA	NA
WP_003096027.1\|6036559_6037132_+	DUF4124 domain-containing protein	NA	NA	NA	NA
WP_003096033.1\|6037402_6038479_+	nitrogen regulation protein NR(II)	Q8QKV7	Ectocarpus_siliculosus_virus	2.4e-05	21.8
WP_003104661.1\|6038481_6039912_+	nitrogen regulation protein NR(I)	NA	NA	NA	NA
WP_003096038.1\|6040868_6041336_-	hypothetical protein	NA	NA	NA	NA
WP_003096047.1\|6041334_6041796_+\|tRNA	tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL	NA	NA	NA	NA
WP_003096050.1\|6041854_6042346_-	protein-export chaperone SecB	NA	NA	NA	NA
WP_003096057.1\|6042382_6042637_-	glutaredoxin 3	V9QKN6	Rhizobium_phage	1.6e-13	43.4
WP_003096058.1\|6042638_6043058_-	rhodanese-like domain-containing protein	NA	NA	NA	NA
WP_003096060.1\|6043382_6044930_+	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	NA	NA	NA	NA
WP_003096062.1\|6045243_6046062_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_023876105.1\|6046211_6047498_+	murein hydrolase activator EnvC	G9BW84	Planktothrix_phage	2.9e-10	39.8
WP_003096067.1\|6047526_6048837_+	S41 family peptidase	A0A0R6PIZ1	Moraxella_phage	3.9e-26	29.0
WP_021263278.1\|6048836_6049610_+	divergent polysaccharide deacetylase family protein	NA	NA	NA	NA
WP_003141877.1\|6049678_6051160_+	hypothetical protein	NA	NA	NA	NA
WP_003096075.1\|6051200_6051956_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_003106330.1\|6052105_6052858_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_003111636.1\|6052948_6053695_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_003106334.1\|6053866_6054637_-	imidazole glycerol phosphate synthase subunit HisF	NA	NA	NA	NA
WP_003106336.1\|6054647_6055385_-	1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase	NA	NA	NA	NA
WP_003111635.1\|6055433_6055694_-	DUF2164 domain-containing protein	NA	NA	NA	NA
WP_023092720.1\|6055697_6056336_-	imidazole glycerol phosphate synthase subunit HisH	NA	NA	NA	NA
WP_003096088.1\|6056335_6056929_-	imidazoleglycerol-phosphate dehydratase HisB	NA	NA	NA	NA
WP_003135903.1\|6057089_6057488_+	acetyl-CoA sensor PanZ family protein	NA	NA	NA	NA
WP_011666785.1\|6057524_6057761_+	hypothetical protein	NA	NA	NA	NA
WP_023876106.1\|6057757_6058864_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_023876107.1\|6058957_6061210_+	AsmA family protein	NA	NA	NA	NA
6060491:6060507	attL	NA	NA	NA	NA
WP_003096098.1\|6061206_6062274_+	A/G-specific adenine glycosylase	NA	NA	NA	NA
WP_003096100.1\|6062317_6062590_+	oxidative damage protection protein	NA	NA	NA	NA
WP_003096102.1\|6062617_6063700_+	oxidoreductase	NA	NA	NA	NA
WP_003096148.1\|6063945_6064683_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_003110598.1\|6064841_6065531_+	DUF502 domain-containing protein	NA	NA	NA	NA
WP_003096153.1\|6065779_6066553_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	9.3e-20	31.1
WP_003096156.1\|6066567_6067320_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_003110597.1\|6067381_6068077_+	ABC transporter permease	NA	NA	NA	NA
WP_003096163.1\|6068073_6068766_+	ABC transporter permease	NA	NA	NA	NA
WP_023876108.1\|6068834_6070055_+	methyltransferase	NA	NA	NA	NA
WP_003110596.1\|6070453_6070924_+	MarR family transcriptional regulator	NA	NA	NA	NA
WP_003135917.1\|6070927_6072406_+	efflux transporter outer membrane subunit	NA	NA	NA	NA
WP_003110594.1\|6072420_6073605_+	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_003096173.1\|6073615_6075145_+	DHA2 family efflux MFS transporter permease subunit	NA	NA	NA	NA
WP_023876109.1\|6076116_6076842_+	AAA family ATPase	NA	NA	NA	NA
WP_023876111.1\|6077079_6078135_-\|portal	phage portal protein	Q9ZXM6	Pseudomonas_virus	3.2e-196	96.9
WP_041025719.1\|6078131_6079895_-\|terminase	terminase ATPase subunit family protein	Q9ZXM5	Pseudomonas_virus	0.0e+00	99.8
WP_023876113.1\|6080050_6080872_+\|capsid	GPO family capsid scaffolding protein	Q9ZXM4	Pseudomonas_virus	2.2e-128	99.3
WP_023091259.1\|6080907_6081924_+\|capsid	phage major capsid protein, P2 family	Q9ZXM3	Pseudomonas_virus	1.7e-191	99.4
WP_023083461.1\|6081929_6082631_+\|terminase	terminase endonuclease subunit	Q9ZXM2	Pseudomonas_virus	6.2e-124	98.7
WP_023876114.1\|6082734_6083196_+\|head	head completion/stabilization protein	Q9ZXM1	Pseudomonas_virus	3.6e-80	99.3
WP_003098378.1\|6083195_6083408_+\|tail	tail protein X	Q9ZXL9	Pseudomonas_virus	4.9e-32	94.1
WP_003098379.1\|6083432_6083786_+	hypothetical protein	Q9ZXL8	Pseudomonas_virus	6.0e-59	100.0
WP_016852027.1\|6083787_6084060_+\|holin	phage holin family protein	Q9ZXL7	Pseudomonas_virus	1.2e-38	98.9
WP_023876115.1\|6084056_6084863_+	DUF3380 domain-containing protein	Q9ZXL6	Pseudomonas_virus	5.4e-148	97.8
WP_041025663.1\|6084859_6085321_+\|lysis	LysB family phage lysis regulatory protein	Q9ZXL5	Pseudomonas_virus	9.0e-71	96.1
WP_023876117.1\|6085398_6085935_+\|tail	phage tail protein	Q9ZXL3	Pseudomonas_virus	4.6e-95	98.3
WP_023876119.1\|6085927_6086401_+	phage virion morphogenesis protein	Q9ZXL2	Pseudomonas_virus	8.0e-67	86.4
WP_144096448.1\|6086672_6087392_+	hypothetical protein	NA	NA	NA	NA
WP_023876121.1\|6088254_6088827_+\|plate	phage baseplate assembly protein V	Q9ZXL0	Pseudomonas_virus	7.4e-83	88.9
WP_022580424.1\|6088823_6089168_+\|plate	phage baseplate protein	Q9ZXK9	Pseudomonas_virus	1.6e-56	98.2
WP_023876122.1\|6089164_6090079_+\|plate	baseplate assembly protein	Q9ZXK8	Pseudomonas_virus	6.2e-164	99.3
WP_023876123.1\|6090078_6090615_+\|tail	phage tail protein I	Q9ZXK7	Pseudomonas_virus	3.1e-99	98.9
WP_023876124.1\|6090616_6093007_+	hypothetical protein	Q9ZXK6	Pseudomonas_virus	0.0e+00	88.8
WP_023876125.1\|6093058_6093520_+\|tail	tail fiber assembly protein	Q9ZXK5	Pseudomonas_virus	8.5e-37	53.9
WP_023876126.1\|6093610_6094786_+\|tail	phage tail sheath protein	Q9ZXK4	Pseudomonas_virus	3.0e-219	98.5
WP_016852040.1\|6094842_6095358_+\|tail	phage major tail tube protein	Q9ZXK3	Pseudomonas_virus	7.4e-90	94.7
WP_023876127.1\|6095411_6095750_+\|tail	phage tail assembly protein	Q9ZXK2	Pseudomonas_virus	1.2e-40	85.2
WP_003098394.1\|6095758_6095878_+\|tail	GpE family phage tail protein	Q9ZXK1	Pseudomonas_virus	1.8e-15	100.0
WP_023876128.1\|6095867_6098627_+\|tail	phage tail tape measure protein	Q9ZXK0	Pseudomonas_virus	0.0e+00	92.1
WP_015967206.1\|6098632_6099073_+\|tail	phage tail protein	Q9ZXJ9	Pseudomonas_virus	6.1e-77	100.0
WP_023876130.1\|6099069_6100347_+	phage late control D family protein	Q9ZXJ8	Pseudomonas_virus	6.0e-234	98.1
WP_079279176.1\|6100568_6101108_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_023876131.1\|6101230_6101764_+	hypothetical protein	NA	NA	NA	NA
WP_023876132.1\|6101943_6102168_-	hypothetical protein	Q9ZXJ5	Pseudomonas_virus	8.8e-32	94.6
WP_033993383.1\|6102485_6102827_-	helix-turn-helix transcriptional regulator	A0A2H4JFL3	uncultured_Caudovirales_phage	1.8e-20	46.4
WP_023876135.1\|6102911_6103124_+	DNA-binding protein	A0A2H4JE67	uncultured_Caudovirales_phage	1.1e-07	48.4
WP_031637512.1\|6103153_6103627_+	hypothetical protein	Q9ZXJ2	Pseudomonas_virus	3.3e-52	69.5
WP_023091244.1\|6103634_6103853_-	hypothetical protein	NA	NA	NA	NA
WP_023876137.1\|6103851_6104043_+	hypothetical protein	NA	NA	NA	NA
WP_023127762.1\|6104045_6104339_+	ogr/Delta-like zinc finger family protein	Q9ZXJ1	Pseudomonas_virus	3.2e-50	97.9
WP_023876138.1\|6104335_6104686_+	hypothetical protein	NA	NA	NA	NA
WP_023876140.1\|6104757_6104991_+	hypothetical protein	Q9ZXI9	Pseudomonas_virus	1.0e-38	98.7
WP_041025664.1\|6104987_6107708_+	toprim domain protein	Q9ZXI8	Pseudomonas_virus	0.0e+00	99.6
WP_023876142.1\|6107752_6108106_+	hypothetical protein	Q9ZXI7	Pseudomonas_virus	3.8e-61	98.3
WP_003098417.1\|6108117_6108324_+	TraR/DksA family transcriptional regulator	Q9ZXI6	Pseudomonas_virus	7.3e-33	100.0
WP_023114957.1\|6108627_6110313_+	hypothetical protein	L7TH64	Pseudomonas_virus	4.8e-287	90.8
WP_023114958.1\|6110323_6110512_+	hypothetical protein	Q38017	Pseudomonas_virus	7.0e-06	76.5
WP_023876143.1\|6110508_6110721_+	DUF4224 domain-containing protein	NA	NA	NA	NA
WP_023116822.1\|6110717_6111866_+	hypothetical protein	V9IQN0	Stenotrophomonas_phage	6.3e-73	40.8
WP_023114962.1\|6112332_6112839_+	type II toxin-antitoxin system death-on-curing family toxin	NA	NA	NA	NA
WP_023876144.1\|6115626_6116607_+\|integrase	integrase	NA	NA	NA	NA
WP_023876145.1\|6116603_6116837_+	hypothetical protein	NA	NA	NA	NA
WP_087819173.1\|6116863_6118002_-\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	7.7e-47	38.7
6126651:6126667	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NC_023019

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection