CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NC_023063	Ehrlichia muris AS145, complete sequence	3 crisprs	DEDDh	1	0	0	0

Cas Category Instructions

Results visualization

1. NC_023063

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NC_023063_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_023063_1

63809-63894

Orphan

Consensus_repeat	Method
AGTAATAATGTTCCTAAAGATGGATC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_023063_1

>merge|NC_023063|1|63809-63894|CRISPRCasFinder
AGTAATAATGTTCCTAAAGATGGATCGGTTACATCGCAGATTAATCAACAGGCTGTAAGTAGTGATAATGTTCCTAAAGATGGATC

>NC_023063|1|1|63809-63894|CRISPRCasFinder
AGTAATAATGTTCCTAAAGATGGATC	GGTTACATCGCAGATTAATCAACAGGCTGTAAGT
AGTGATAATGTTCCTAAAGATGGATC

Protein	Signature genes	Signature genes Name	Protein_function
NC_023063.1\|WP_024071692.1\|56503_57754_+\|tyrosine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235645
NC_023063.1\|WP_024071702.1\|70844_72095_+\|citrate-synthase	unknown	unknown	gnl\|CDD\|99867
NC_023063.1\|WP_024071699.1\|65334_67737_+\|DUF3514-domain-containing-protein	unknown	unknown	gnl\|CDD\|314839
NC_023063.1\|WP_024071707.1\|77303_78548_+\|heme-biosynthesis-protein-HemY	unknown	unknown	gnl\|CDD\|273126
NC_023063.1\|WP_024071694.1\|59004_59373_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|173146
NC_023063.1\|WP_024071696.1\|61910_62810_-\|class-I-fructose-bisphosphate-aldolase	unknown	unknown	gnl\|CDD\|236431
NC_023063.1\|WP_024071689.1\|51677_53516_+\|ankyrin-repeat-domain-containing-protein	unknown	unknown	gnl\|CDD\|293786
NC_023063.1\|WP_024071695.1\|60598_61480_+\|protein-translocase-subunit-SecF	unknown	unknown	gnl\|CDD\|237275
NC_023063.1\|WP_024071693.1\|57797_58994_+\|5-aminolevulinate-synthase	unknown	unknown	gnl\|CDD\|236370
NC_023063.1\|WP_024071687.1\|50099_50897_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|376777
NC_023063.1\|WP_024071703.1\|72409_73612_+\|glutamate--cysteine-ligase	unknown	unknown	gnl\|CDD\|378081
NC_023063.1\|WP_024071706.1\|76530_77307_+\|hypothetical-protein	unknown	unknown	unknown
NC_023063.1\|WP_024071704.1\|73965_74970_-\|DNA-polymerase-III-subunit-delta	unknown	unknown	gnl\|CDD\|235834
NC_023063.1\|WP_024071701.1\|68590_70171_+\|glutamine-hydrolyzing-GMP-synthase	unknown	unknown	gnl\|CDD\|234614
NC_023063.1\|WP_024071691.1\|54778_56188_-\|type-I-glutamate--ammonia-ligase	unknown	unknown	gnl\|CDD\|181884
NC_023063.1\|WP_024071705.1\|75286_76519_+\|lipoprotein-releasing-ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|274034
NC_023063.1\|WP_024071708.1\|78553_78808_+\|DUF1467-family-protein	unknown	unknown	gnl\|CDD\|369320
NC_023063.1\|WP_024071700.1\|68029_68311_-\|hypothetical-protein	unknown	unknown	unknown
NC_023063.1\|WP_024071688.1\|50908_51625_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|213228
NC_023063.1\|WP_024071690.1\|53592_54570_-\|polyprenyl-synthetase-family-protein	unknown	unknown	gnl\|CDD\|223220

Protein	Function_ID	Function_description	E-value
NC_023063.1\|WP_024071692.1\|56503_57754_+\|tyrosine--tRNA-ligase	gnl\|CDD\|235645	PRK05912, PRK05912, tyrosyl-tRNA synthetase; Validated.	0
NC_023063.1\|WP_024071702.1\|70844_72095_+\|citrate-synthase	gnl\|CDD\|99867	cd06114, EcCS_like, Escherichia coli (Ec) citrate synthase (CS) GltA_like. CS catalyzes the condensation of acetyl coenzyme A (AcCoA) and oxalacetate (OAA) to form citrate and coenzyme A (CoA), the first step in the citric acid cycle (TCA or Krebs cycle). The overall CS reaction is thought to proceed through three partial reactions and involves both closed and open conformational forms of the enzyme: a) the carbanion or equivalent is generated from AcCoA by base abstraction of a proton, b) the nucleophilic attack of this carbanion on OAA to generate citryl-CoA, and c) the hydrolysis of citryl-CoA to produce citrate and CoA. There are two types of CSs: type I CS and type II CSs. Type I CSs are found in eukarya, gram-positive bacteria, archaea, and in some gram-negative bacteria and are homodimers with both subunits participating in the active site. Type II CSs are unique to gram-negative bacteria and are homohexamers of identical subunits (approximated as a trimer of dimers). Some type II CSs including EcCS are strongly and specifically inhibited by NADH through an allosteric mechanism. Included in this group is an NADH-insensitive type II Acetobacter acetii CS which has retained many of the residues used by EcCS for NADH binding.	0
NC_023063.1\|WP_024071699.1\|65334_67737_+\|DUF3514-domain-containing-protein	gnl\|CDD\|314839	pfam12027, DUF3514, Protein of unknown function (DUF3514). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are typically between 368 to 823 amino acids in length.	5.01718e-46
NC_023063.1\|WP_024071694.1\|59004_59373_-\|hypothetical-protein	gnl\|CDD\|173146	PRK14683, PRK14683, hypothetical protein; Provisional.	9.7258e-66
NC_023063.1\|WP_024071696.1\|61910_62810_-\|class-I-fructose-bisphosphate-aldolase	gnl\|CDD\|236431	PRK09250, PRK09250, class I fructose-bisphosphate aldolase.	1.2988e-168
NC_023063.1\|WP_024071689.1\|51677_53516_+\|ankyrin-repeat-domain-containing-protein	gnl\|CDD\|293786	sd00045, ANK, ankyrin repeats. Ankyrin repeats are one of the most abundant repeat motifs, and generally function as scaffolds for protein-protein interactions in processes including cell cycle, transcriptional regulation, signal transduction, vesicular trafficking, and inflammatory response. Although predominantly found in eukaryotic proteins, they are also found in some bacterial and viral proteins. Less is known of their physiological roles in prokaryotes. Some bacterial ANK proteins play key roles in microbial pathogenesis by mimicking or manipulating host function(s). The pathogen Providencia alcalifaciens N-formyltransferase ankyrin repeats function in small molecule binding and allosteric control. Ankyrin-repeat proteins have been associated with a number of human diseases.	0.000415312
NC_023063.1\|WP_024071695.1\|60598_61480_+\|protein-translocase-subunit-SecF	gnl\|CDD\|237275	PRK13022, secF, protein translocase subunit SecF.	4.11057e-102
NC_023063.1\|WP_024071693.1\|57797_58994_+\|5-aminolevulinate-synthase	gnl\|CDD\|236370	PRK09064, PRK09064, 5-aminolevulinate synthase; Validated.	0
NC_023063.1\|WP_024071687.1\|50099_50897_+\|ABC-transporter-permease	gnl\|CDD\|376777	pfam02405, MlaE, Permease MlaE. MlaE is a permease which in E. coli is a component of the Mla pathway, an ABC transport system that functions to maintain the asymmetry of the outer membrane. In NMB1965 it is involved in L-glutamate import into the cell. In Arabidopsis thaliana TGD1 it is involved in lipid transfer within the cell.	1.97573e-69
NC_023063.1\|WP_024071703.1\|72409_73612_+\|glutamate--cysteine-ligase	gnl\|CDD\|378081	pfam08886, GshA, Glutamate-cysteine ligase. This is a rare family of glutamate--cysteine ligases, EC:6.3.2.2, demonstrated first in Thiobacillus ferrooxidans and present in a few other Proteobacteria. It is the first of two enzymes for glutathione biosynthesis. It is also called gamma-glutamylcysteine synthetase. The structure of this family has been solved, and is similar to that of human glutathione synthetase and very different to gamma-glutamylcysteine synthetase from Escherichia coli.	0
NC_023063.1\|WP_024071704.1\|73965_74970_-\|DNA-polymerase-III-subunit-delta	gnl\|CDD\|235834	PRK06585, holA, DNA polymerase III subunit delta; Reviewed.	6.95866e-52
NC_023063.1\|WP_024071707.1\|77303_78548_+\|heme-biosynthesis-protein-HemY	gnl\|CDD\|273126	TIGR00540, TPR_hemY_coli, heme biosynthesis-associated TPR protein. Members of this protein family are uncharacterized tetratricopeptide repeat (TPR) proteins invariably found in heme biosynthesis gene clusters. The absence of any invariant residues other than Ala argues against this protein serving as an enzyme per se. The gene symbol hemY assigned in E. coli is unfortunate in that an unrelated protein, protoporphyrinogen oxidase (HemG in E. coli) is designated HemY in Bacillus subtilis. [Unknown function, General].	5.87817e-10
NC_023063.1\|WP_024071691.1\|54778_56188_-\|type-I-glutamate--ammonia-ligase	gnl\|CDD\|181884	PRK09469, glnA, glutamate--ammonia ligase.	0
NC_023063.1\|WP_024071705.1\|75286_76519_+\|lipoprotein-releasing-ABC-transporter-permease-subunit	gnl\|CDD\|274034	TIGR02212, releasing_system_transmembrane_protein_lolC., lipoprotein releasing system, transmembrane protein, LolC/E family. This model describes the LolC protein, and its paralog LolE found in some species. These proteins are homologous to permease proteins of ABC transporters. In some species, two paralogs occur, designated LolC and LolE. In others, a single form is found and tends to be designated LolC. [Protein fate, Protein and peptide secretion and trafficking].	1.70405e-140
NC_023063.1\|WP_024071708.1\|78553_78808_+\|DUF1467-family-protein	gnl\|CDD\|369320	pfam07330, DUF1467, Protein of unknown function (DUF1467). This family consists of several bacterial proteins of around 90 residues in length. The function of this family is unknown.	8.68693e-09
NC_023063.1\|WP_024071701.1\|68590_70171_+\|glutamine-hydrolyzing-GMP-synthase	gnl\|CDD\|234614	PRK00074, guaA, GMP synthase; Reviewed.	0
NC_023063.1\|WP_024071688.1\|50908_51625_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|213228	cd03261, ABC_Org_Solvent_Resistant, ATP-binding cassette transport system involved in resistant to organic solvents. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.	4.24315e-112
NC_023063.1\|WP_024071690.1\|53592_54570_-\|polyprenyl-synthetase-family-protein	gnl\|CDD\|223220	COG0142, IspA, Geranylgeranyl pyrophosphate synthase [Coenzyme metabolism].	9.3098e-90

>NC_023063.1|WP_024071696.1|61910_62810_-|class-I-fructose-bisphosphate-aldolase
MLVSNRIQDILGFYESENPGVKANLIRMLLHGKLAGSGKLLILPVDQGMEHGPTKSFSKNPQSYDPHYHFKLAIEGGFSAYAAPLGMLEAGASTYAGLIPLILKLNSSTLLSPKNSLDQVVTSSIKDALKLGCSAIGITIYPGSHNFFSMIRETRDLIAEAKAAGLAVVIWSYPRGNDISKQGETAIDIVAYAAHIAASLGANIIKVKLPTSHIERDSIPYDISSLEKRIEYIKLSCFARRRLVVFSGGETKTDEELFQEVQSIKLGGGDGSIIGRNSFQRSKSNAISMIEKIAKIYNN
>NC_023063.1|WP_024071695.1|60598_61480_+|protein-translocase-subunit-SecF
MVFLSGININFSKYRIYAVSCSGILMLVSILLVLLKGIYFGTDFAGGIIIELRADQIDTRNVNLKLQENGFIGFSVQGFKNNDKELMIRFKSEKNSNQLHAIEKIKGVLEEILGEVTYLKIDYVGPQVGYKQIFEGLCAIVLSLLGMFLYLWLRFQWSFALGGVLALIHDVVLTLGLISLCNIEFNLSSTAAILTVIGYSVNDSVVIYDRIRELLKKKIQRKLPDIINMSINATLSRTILTSGTTMLASIPLMLLCQGTVRELSIIVSFGIAVGTYSSIFIATTSLSNSISKA
>NC_023063.1|WP_024071694.1|59004_59373_-|hypothetical-protein
MSYIKNYKHFIYNIVGYLGEIVIIWFLKCKRYHIIKHRYKCVLGETDIIALKNKYLVFIEVKTSILGSEIPITNKQQKSIVRVAKYFITYHTKFEEYNIRFDLYFLSLSKGLIHIPHAWQEL
>NC_023063.1|WP_024071693.1|57797_58994_+|5-aminolevulinate-synthase
MVNYEEIFFNRIKHIKDEGRYREFTGFSRIPGQFPYAIECGVNNVVTLWCSNDYLGMGQNEHVILAIKNYSSSVGAGGTRNISGTTKEIIELEESLADLHKKPAALTFVCGYVANQTTISTLLSVIPDIVVFSDEKNHSSMIEGIRGSNRAKYIFKHNDVSHLEDLLKSVDISVPKIIIFESLYSMDGDVAPISKICDLADKYNAITYLDEVHAVGMYGNRGGGISEQENISDRITIIQGTLSKAFGVMGGYIAGSKNLVDVIRSFAPGFIFTTALSPLIASSARISVEHLKNSSIEREKQREVVSKVKESFSKVGINFVKTDTHIIPVIIGNSMACKNISQVLLKEYKIYIQSINYPTVPVGTERLRITPTPFHTDEMISELTQALVSVLRRFKIMG
>NC_023063.1|WP_024071692.1|56503_57754_+|tyrosine--tRNA-ligase
MKFKSQFLSVLYSRGYFNQCTNVSALDQLMAQQCIRVYIGFDCTAKSLHIGSLVQIMVLRYLQKFGHKPIVLLGDGTTKIGDPSGKDKSRVMLSANEIEENTLGICEVLKKFIVFGNGTHDALLVRNTEWLDDLNYIEFLRDIGKHFSVNNMLTFDSVRLRLEREQNLSFLEFNYMLLQSYDFVELNRRHNCLLQIGGSDQWGNIVSGVELGRKLKLPELFGLTTNLVLTSSGEKMGKTAQGAVWLDGSMYNPVDYWQYFRNVKDEDVGRFLKLFTELSLDEIKELELLQGHEINEAKKILATEATKICHGKQIAQSIANDALKVFEHNDDSGLSAFYVSKCDVELGLPIIKLLQISGMEKTSSSARRLINGRGCKINDVVLVDMNYKLSLKDFCNTYYVKLSCGKKRHLKIMLEE
>NC_023063.1|WP_024071691.1|54778_56188_-|type-I-glutamate--ammonia-ligase
MFLSIEDTLDYIKKNAINFIDLRFTGSNGKWHHITRSAETTDAQVLSAGINFDSSSIPGWQSIEKSDMILLPDISTAFIDPFSAQSTLVIICNIVDPYNQSPYSKDPRYTAQKASKYMLSTGIADKCYFGPEVEFFIFDNVQFHTGMYNSYFKIDSAEHDTPFQKREFSNSHRPKARGGYMPTPPTDSLHDIRSEMLTMFKEVGIIPLIHHHEVAASQCEVGFQHDELLLSADNVQKCKYIVNGVASSYGKTTTFMPKPVIQDNGSGMHCHQSLWKDNVNLFVNPDGSISETCLYYIGGIIKYGKAINAFANPSTNSYKRLVPHFEAPTWLTYSYENRSSAIRIPYASKNDTNAKRIEVRFPDPLANPYLCFSAQLMAGLYGIQNKVHPGPAIDKNLYSLDKTELQQLTSVASSLEEALECLDNNREFLLVGNVFTNDQIDSYINLKMLEAKDLQLHPHPIEFINYYNS
>NC_023063.1|WP_024071690.1|53592_54570_-|polyprenyl-synthetase-family-protein
MTNNFNNTFLQLKSLVQQDLEEMEFLISHQNDKHIALITEIIYHLIKSGGKRIRPIIFFIICKMLNCNNANKILIAAAIEFIHNATLLHDDVIDESDIRRGIKTSNFIWGNKASILVGDFLLAVSFQWLIECKDLNILSILSQTSNTIIVGEVQQMISSHDINLSKEKYIEIISAKTASLFGATCESAATLAQVTNKEKEALKNFGNNFGISFQIMDDILDYTASEEQFGKKLGNDLFTGKTTLPVIIAYQNATSKEKKFWDQISVNSNLEQAISYIKSHNAIEKSIDIATIYVNQAKSCLNIFAESNYKMHLNKLLDCILHRGY
>NC_023063.1|WP_024071689.1|51677_53516_+|ankyrin-repeat-domain-containing-protein
MLIIRKMAITQYTRPVLFSEILAHNVSFLKTLESLEAEDVLLLKDELGSVFYYLIMSLYDISGIQDNSINTIKDRLKTVLLRAIRQSSIDESQVAGCQATELREMSNKLKLAYQSVSNRVCETLLNIIGNETSQEETDPEVIQQCKIEMFDSVRRAVEILAGKINTAVAEQRISVQQVSEFLSSSNGSGDARLPGDMMSALVQLYFLIDESECADSSYLLVRTFLMSFSQYKLDAQGRNSMHYAVNMCNQRKQENFLCEIIQLLVYERIEMVGEPDNYGNNPMHYAACAPYMNYIVIQYFAKNAPLIFTQQNAHGDTPLHVMSYMYFISFAKVLSAYNVLYQNDMNKNLKPIVNNKMNINAIKCKLRISVQNQKMLVKEVKAYIVECIESYRLLLTMVSFDQLCEVKNSLGHTVYDIIHANMTSISNKNLEALFRDFSQVSSRLPIYDSRVDAQHALCVNLCFSDQYKIVGYNRFGHVLYALTKRMYDLMSCKFAAVSNAKATYEAIKNERGDFKFLFLLVLTLFLTLCVVNVVLGFKVKSIFGLEQGVYRSVLFSVISSVFFASVSLCCFLYAQYSNRINDEIMNQEERTIKSILLSHLDIEEIDIAKKIM
>NC_023063.1|WP_024071688.1|50908_51625_+|ATP-binding-cassette-domain-containing-protein
MNYISLSDLHVDFHGHRVLKGINLDIAYGESLVIVGESGSGKSVLTKTILGLITPTSGKVIVSGVDIRHNKSLIKNFGVLFQNCALFDSLTVCENIAFNLHYRFNRDKRLSRSIAASGLNLVGLSSDVLDRYPIELSGGMKKRIALARAIVSEPKIMILDEPTSGLDPIMSDVVNEIIIKCHKEFNLTVITITHDISSAFKIASKIAVLYDGKIIACESVRNIKNIDNQYVKDFICRS
>NC_023063.1|WP_024071687.1|50099_50897_+|ABC-transporter-permease
MRFLRLHLMPFCLLQTIGRYVISVVFNIGHSFIFFVKFIYNCFMPPYYYGVLLKQFIEIFFFSLPIVGITAMFTGAVLILQNSLIIHNDVSSDFASGIVVVAIVRELGPVLIGLIIAGRVGAAIAAEIGTMRITEQIDALFTLDTHPFKYLIVPRIVSAMIAMPMLIVCTDLIGAYGGYIVGSYQLGYTSEMYIKGVMQFLHVRDIILGLVKATVFGFIVSFMGCYSGYYCSGGARGVGLATTYVVVVSSMFIILFNYIITVFYS
>NC_023063.1|WP_024071699.1|65334_67737_+|DUF3514-domain-containing-protein
MLLLLSDINDEIMKAISRSSAKFSKKKKSKNKRINGELEQQEGRIASDVCETSVTSQQLTQQFSNLDIQSSIQKSIVVTEEAGLCTSNKKETKVKSDSILEDVEKLSGKPLRRNIRKELVLRDLSSTSSSMTSVTDTGTVKVKILCSEKERSREAENFEIKVPGLKEESSNKQNIKVESSSTVLQQTTKRKRWEKLTQSFVQESIIVREDTDAYTDNKEDTKVVSGDVITSYDKPSRRSDRKLKDAKEDLVSDASKSYIQAVKIALLDIKSMQKSKTSCVASHEETVNQSQNLEDKYLREGAKPKICVSQAYSSVVSCSKKLGVISLKEEGSSQERVCGDIKGGKIKSSAVPEGTMRLSDKPLRRNIRKKLVLRDLSSTNSSITSASYADSVKVTVLGLKEESSNGQDGKTCCLKDEELPQGQGKVTEISEMVGSVTHSGIDAGLSSTKLTTNTIEGGGELTSVKILPVKHLTTSPPVLFSAEQYSARECIMKFQSTVGCFVTMHTEYALSFMDMFDVCEDKRVVLKSGIENTLLTVTENLPLCVFIIKLGTLEHLLTRFCQFNMCNSLRYCASHFDNQEFIDSMIGKFLAADHSELTCPLVQLGTTFWGNNQSFQRQAVYKLHSRKFYMSLLDMCCKFACILNARERFAKEVVDFVVLSCITCFGQMYKVTRIAAKGCAVKLSYAVAFSRFSVKLRNAFRHLYSPQKNSVKEISGLKIPWNIIQICNREFHDTIKSHVKTNSMNFVVIASHLASFARKLLLDEEVLSLIRQDIDMYYEVVEKRYLTMGSGSSYSCQNLR
>NC_023063.1|WP_024071700.1|68029_68311_-|hypothetical-protein
MNEELSLDESLDSAMRYVEKGCKTKIDAKMKACIKNEVKSAIPELNKVLTPLITSALNAEQKTLSQNQQEELVKNFIAIMMPHMQKIMVASDQ
>NC_023063.1|WP_024071701.1|68590_70171_+|glutamine-hydrolyzing-GMP-synthase
MSRVAIIDFGSQFTQLLARRVRELNIYSEIFAHDVAFDRIKDSKAFILSGGPKSVFNLTEIPRIVHDIIELNERTSIPVLGVCYGLQLLSNYFKSTVVQSYGKEFGKATLNIVKGSEIIKDVWKVGEQASVWMSHADSVRDVPYGFEVIAHSVLNNTIAMISNEKRRIYGMQFHPEVYHTPDGIKLLSNFVKIADCKNSWTMDSFLDDQQNLIKKQVGNKKVIAALSGGVDSSVAAALTYRAIGDQLCCIFIDNGLLRYNEAEKVRQLFINQFKIPVTVVDKSSIFLNRLQSITDPEQKRKIIGKTFIEVFEEEANKIGDVEFLMQGTIYPDVIESGGPAEKESVTIKSHHNVGGLPDIMKLQLVEPLRFLFKDEVRLLGKKLGISNEILTRHPFPGPGLAIRIIGEITQEKVRMLQAADEIYIDLIKKYNLYDIIWQAFAVLLPVRTVGVMGDSRTYGYTCALRAVTSSDGMTAECFPFEVDLETKLIFYDFLKDVSNAIVNNVQGINRVVYDTTSKPPATIEWE
>NC_023063.1|WP_024071702.1|70844_72095_+|citrate-synthase
MIKEAVLELDDQRIKLPVLYDTNGNKAVDITSLYKDTGVLTYDPGFMSTAACESKITFIDGNKGILCYRGHNIVDLVNGNKSFVEIIYLLFYGVFPSSEDLQNFTLQISQEYTPPQVVYDVIKAFSQDSHPMAILMACFSALAAYYHDREADKDELKCAKLAVAKIASIVALIYRYITNQDFITADTKLSYSENFVHMMFDISSYKFTQVVAKALDIIFVLHADHEQNASTATVRLAGSAGADLFACLVAGTATLWGPAHGGANEAVINMLMTIEKPSNVKQFIQKVKDGSKTTRLMGFGHRVYKNYDPRAKMMCEICREVLNDLGIDDPLLEVAVELENIALQDSYFIERNLYPNVDFYSGIVLKAIGIPVKMFTTLFALARTSGWSAQWYEMVANKNYKICRPRQLYTGHITKI
>NC_023063.1|WP_024071703.1|72409_73612_+|glutamate--cysteine-ligase
MTIIVDTLNDIFRKYKLDIENWFSSKFAKYNPVLNVSVDLRISDYKIAPVDTNIFPAGYNNFTKQSQSYTSQLLREYIVNHINCRKVLIVAENHTRNLKYVDSLIALRNIVNNAGFIVEVGICNINQNVELISSTGHVINCLYLTNDNGVLQAGDGFIADLILLNNDMTSGIPKVLQNLKYQSIMPSLFLGWFNRSKSNHFSTYEKLSREFCENLKIDPWLISTLFSSCNNICFLNDQGVDSIANEVDVIINRVRSKFQLYNIKEQPYVFIKADNGTYGMGIVVAYCGDDVLTLNKKNRNKMKRIKDSKVVNSVIIQEGITTREIFNDYVAEPLVYFIGHTPSCYLYRYHAVKDRFSNLNSVGCDFIDVSYRQQDVLCWTIVSKMAALAAAIEMHDILNY
>NC_023063.1|WP_024071704.1|73965_74970_-|DNA-polymerase-III-subunit-delta
MKITSSKLYSFFNNPQSVNNILIYGNDYGKINMYKEKIINHVNINSDFTISNLDFPTVNKNPSTLFIELTTISMFCENKLIILVNGEKSISQELKHILNNNIGNNYVIITSGELSTDSTLRQYYDNSRNAASIGCYKDDNDNLTFIISDFLTKNKIHYNSITLQYLHNVLSQNCNALQPELEKLMLYIGNDKNLTTQNIQESLLTELDPVSEDLCVSIAEKNLENFTKFSDILLKNKFTPIALIRILIKYFLRLEYLIRTVKNGEPINQALKSIHPPIFFKSIPTIKKHISAISHSEVNNIIRKLVEIEIQCKKSDLNQEVIFKYYLTAMIISK
>NC_023063.1|WP_024071705.1|75286_76519_+|lipoprotein-releasing-ABC-transporter-permease-subunit
MWFKFELMLALRYLQSSSSGFLCSMITMLSVIGITLGVATLIIVMSVMNGFGEKLLNCVVGLNGHIAIYFNDNIDCDYHDITRLIKEIPGVKDAVSITENQAMIKSNSNVSGVIVRGIEKQDIERNDIIANNIVSGSIAEFNDGIAIGIKLAEILHVNYGDKLTIISSESISTVIGNIPRMKTYKVVAIFDVGMYEYDSTLVYMPLHASQLFFRYDNRVKSIEVSVLDINKSSEILNIIESKTNMKGEDWKMQQGSYFHALKIESNVMFFILTLIIIVATFNIISSLSILVQDKKGAIAIMRTLGVTRCGILRIFCMCGFFIGFIGTILGCIVGVVVSLNIDEIKSMLEKISDSNIFDPIIYFFDTLPSVLLVEDVVKISLLSLFLSLTAAMLPARKAACQDPADILRHE
>NC_023063.1|WP_024071706.1|76530_77307_+|hypothetical-protein
MVMRAVWGWFFMILIATSCSICAVFSYLDVKKDLAEFSQQYRKVMENDVRSVLVQVNQSLLNSYLSKQKENCPVQRIVTSENNDIISCSSEEWLAKLLLSVINLKEAFLGDISVKSIIYSIKPMLLKLDDNKINEAVAEIERLDSKKLTTFSRLKFSFKKIAHELQYLRSNMVQKVFFKWIVVKNQQDVLLHNLKEVEGYLDASLWSDALNFSKKELSSVAELELWIQQLEDIVSMEKNISVIYDQLSKYIIKLPGVS
>NC_023063.1|WP_024071707.1|77303_78548_+|heme-biosynthesis-protein-HemY
MITSVLIFVVVALIVGLWGIDCDGIIRIDWLGYDIEINILFALFIVAVIFLLLILLVRVIFCLSRCVYKYGRNLQSKKMTLLEQGYMYLNCGDIERAEKNIIKLGNFNHPSLFLLKGRVCFDNKRYTLAEKYFAQFTKVVPVIDTSLGVYLLSVIMQIQDQIQQLSLLRKMLEIFYKQSWSTIFKLEIYRISRDWSNAIEEMKKVMKLRISLPYNMQEMLSIFYYALAKQYYDLQKYDDGLKVLDNIKNCSQYHSTAVTLLKAQFYMDTDRKRKAVSILEHEYRTNPHPDIANFYLDIMQHNSNAVHKLYSFNTGYYFSIYLIAQDAINLGEYDAAMKYLNHSFKTQTYISLYFLILKLKVLSQDHSELLYWVDKITKDAIADKHWSCAKCKYTPTRWHYECDHCKGFNTIIWT
>NC_023063.1|WP_024071708.1|78553_78808_+|DUF1467-family-protein
MVIENIVFFIVSWWVILFLILPIKVKVSDNPVVGVASSAPIESYLFIKSIIATVTSALLTGLYVYLKIKGYIDFEYMYDLITFI

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NC_023063_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_023063_2

157159-157299

Orphan

Consensus_repeat	Method
CCTTGTTGGATGTCGGTTGTAAAGGTTGTATAAGTGGTTTTTA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_023063_2

>merge|NC_023063|2|157159-157299|CRISPRCasFinder
CCTTGTTGGATGTCGGTTGTAAAGGTTGTATAAGTGGTTTTTATTTAGTTTAATAATGTGTCCCGTGTTTCTGTAGTTGCTAAGTAAAAAAAGAGCTTCCTTGTTGGATGTCGGTTGTAAAGGTTGTATAAGTGGGTTTTA

>NC_023063|2|2|157159-157299|CRISPRCasFinder
CCTTGTTGGATGTCGGTTGTAAAGGTTGTATAAGTGGTTTTTA	TTTAGTTTAATAATGTGTCCCGTGTTTCTGTAGTTGCTAAGTAAAAAAAGAGCTT
CCTTGTTGGATGTCGGTTGTAAAGGTTGTATAAGTGGGTTTTA

Protein	Signature genes	Signature genes Name	Protein_function
NC_023063.1\|WP_024071775.1\|163971_164598_+\|hypothetical-protein	unknown	unknown	unknown
NC_023063.1\|WP_024071769.1\|153800_154001_-\|50S-ribosomal-protein-L35	unknown	unknown	gnl\|CDD\|234676
NC_023063.1\|WP_024071764.1\|149674_150943_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340927
NC_023063.1\|WP_024071762.1\|147370_148414_+\|Fe(3+)-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270260
NC_023063.1\|WP_024071765.1\|151172_151343_-\|Trm112-family-protein	unknown	unknown	gnl\|CDD\|225391
NC_023063.1\|WP_024071767.1\|152370_153414_-\|phenylalanine--tRNA-ligase-subunit-alpha	unknown	unknown	gnl\|CDD\|234780
NC_023063.1\|WP_024071781.1\|173176_174064_-\|succinate--CoA-ligase-subunit-alpha	unknown	unknown	gnl\|CDD\|180194
NC_023063.1\|WP_024071780.1\|169406_172070_+\|alanine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234701
NC_023063.1\|WP_024071778.1\|167321_168119_-\|glutamine-synthetase	unknown	unknown	gnl\|CDD\|223252
NC_023063.1\|WP_024071777.1\|165576_166368_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293837
NC_023063.1\|WP_024071779.1\|168125_169250_-\|phosphate-ABC-transporter-permease-subunit-PstC	unknown	unknown	gnl\|CDD\|223646
NC_023063.1\|WP_024071768.1\|153400_153775_-\|50S-ribosomal-protein-L20	unknown	unknown	gnl\|CDD\|179959
NC_023063.1\|WP_024071772.1\|157642_159058_-\|dihydrolipoyl-dehydrogenase	unknown	unknown	gnl\|CDD\|235798
NC_023063.1\|WP_024071770.1\|154359_154992_+\|DUF1013-domain-containing-protein	unknown	unknown	gnl\|CDD\|368812
NC_023063.1\|WP_024071774.1\|162518_163967_+\|hypothetical-protein	unknown	unknown	unknown
NC_023063.1\|WP_024071773.1\|159276_162033_+\|hypothetical-protein	unknown	unknown	unknown
NC_023063.1\|WP_024071763.1\|149165_149429_-\|30S-ribosomal-protein-S16	unknown	unknown	gnl\|CDD\|234588
NC_023063.1\|WP_024071771.1\|155371_156823_+\|transcription-termination-factor-Rho	unknown	unknown	gnl\|CDD\|236490
NC_023063.1\|WP_024071776.1\|164587_165127_+\|hypothetical-protein	unknown	unknown	unknown
NC_023063.1\|WP_024071766.1\|151678_152377_-\|SDR-family-NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|187615

Protein	Function_ID	Function_description	E-value
NC_023063.1\|WP_024071769.1\|153800_154001_-\|50S-ribosomal-protein-L35	gnl\|CDD\|234676	PRK00172, rpmI, 50S ribosomal protein L35; Reviewed.	1.14366e-17
NC_023063.1\|WP_024071764.1\|149674_150943_+\|MFS-transporter	gnl\|CDD\|340927	cd17369, MFS_ShiA_like, Shikimate transporter and similar proteins of the Major Facilitator Superfamily. This subfamily is composed of Escherichia coli shikimate transporter (ShiA), inner membrane metabolite transport protein YhjE, and other putative metabolite transporters. ShiA is involved in the uptake of shikimate, an aromatic compound involved in siderophore biosynthesis. It has been suggested that YhjE may mediate the uptake of osmoprotectants. The ShiA-like subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	7.08397e-96
NC_023063.1\|WP_024071762.1\|147370_148414_+\|Fe(3+)-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270260	cd13542, PBP2_FutA1_ilke, Substrate binding domain of ferric iron-binding protein, a member of the type 2 periplasmic binding fold superfamily. FutA1 is the periplasmic component of an ABC-type iron transporter and serves as the primary receptor in Synerchosystis species. The periplasmic iron binding protein plays an essential role in the iron uptake pathway of Gram-negative pathogenic bacteria and is critical for survival of these pathogens within the host. After binding iron with high affinity, FutA1 interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. The iron- and thiamine-binding proteins belong to the PBPI2 superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	2.8473e-142
NC_023063.1\|WP_024071765.1\|151172_151343_-\|Trm112-family-protein	gnl\|CDD\|225391	COG2835, COG2835, Uncharacterized conserved protein [Function unknown].	5.04732e-21
NC_023063.1\|WP_024071767.1\|152370_153414_-\|phenylalanine--tRNA-ligase-subunit-alpha	gnl\|CDD\|234780	PRK00488, pheS, phenylalanyl-tRNA synthetase subunit alpha; Validated.	0
NC_023063.1\|WP_024071781.1\|173176_174064_-\|succinate--CoA-ligase-subunit-alpha	gnl\|CDD\|180194	PRK05678, PRK05678, succinyl-CoA synthetase subunit alpha; Validated.	3.44486e-172
NC_023063.1\|WP_024071780.1\|169406_172070_+\|alanine--tRNA-ligase	gnl\|CDD\|234701	PRK00252, alaS, alanyl-tRNA synthetase; Reviewed.	0
NC_023063.1\|WP_024071778.1\|167321_168119_-\|glutamine-synthetase	gnl\|CDD\|223252	COG0174, GlnA, Glutamine synthetase [Amino acid transport and metabolism].	3.24889e-48
NC_023063.1\|WP_024071777.1\|165576_166368_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293837	cd16279, metallo-hydrolase-like_MBL-fold, uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo. Members of the MBL-fold metallohydrolase superfamily are mainly hydrolytic enzymes which carry out a variety of biological functions. The class B metal beta-lactamases (MBLs) for which this fold was named perform only a small fraction of the activities included in this superfamily.Activities carried out by superfamily members include class B beta-lactamases, hydroxyacylglutathione hydrolases, AHL (acyl homoserine lactone) lactonases, persulfide dioxygenases, flavodiiron proteins, cleavage and polyadenylation specificity factors such as the Int9 and Int11 subunits of Integrator, Sdsa1-like and AtsA-like arylsulfatases, 5'-exonucleases human SNM1A and yeast Pso2p, ribonuclease J and ribonuclease Z, cyclic nucleotide phosphodiesterases, insecticide hydrolases, and proteins required for natural transformation competence. Classical members of the superfamily are di-, or less commonly mono-, zinc-ion-dependent hydrolases, however the diversity of biological roles is reflected in variations in the active site metallo-chemistry. Some members of this subgroup are named as octanoyltransferase (also known as lipoate-protein ligase B).	2.07083e-75
NC_023063.1\|WP_024071779.1\|168125_169250_-\|phosphate-ABC-transporter-permease-subunit-PstC	gnl\|CDD\|223646	COG0573, PstC, ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism].	3.15197e-68
NC_023063.1\|WP_024071768.1\|153400_153775_-\|50S-ribosomal-protein-L20	gnl\|CDD\|179959	PRK05185, rplT, 50S ribosomal protein L20; Provisional.	4.52962e-62
NC_023063.1\|WP_024071772.1\|157642_159058_-\|dihydrolipoyl-dehydrogenase	gnl\|CDD\|235798	PRK06416, PRK06416, dihydrolipoamide dehydrogenase; Reviewed.	0
NC_023063.1\|WP_024071770.1\|154359_154992_+\|DUF1013-domain-containing-protein	gnl\|CDD\|368812	pfam06242, DUF1013, Protein of unknown function (DUF1013). Family of uncharacterized proteins found in Proteobacteria.	5.09661e-78
NC_023063.1\|WP_024071763.1\|149165_149429_-\|30S-ribosomal-protein-S16	gnl\|CDD\|234588	PRK00040, rpsP, 30S ribosomal protein S16; Reviewed.	1.25677e-42
NC_023063.1\|WP_024071771.1\|155371_156823_+\|transcription-termination-factor-Rho	gnl\|CDD\|236490	PRK09376, rho, transcription termination factor Rho; Provisional.	0
NC_023063.1\|WP_024071766.1\|151678_152377_-\|SDR-family-NAD(P)-dependent-oxidoreductase	gnl\|CDD\|187615	cd05357, PR_SDR_c, pteridine reductase (PR), classical (c) SDRs. Pteridine reductases (PRs), members of the SDR family, catalyzes the NAD-dependent reduction of folic acid, dihydrofolate and related compounds. In Leishmania, pteridine reductase (PTR1) acts to circumvent the anti-protozoan drugs that attack dihydrofolate reductase activity. Proteins in this subgroup have an N-terminal NAD-binding motif and a YxxxK active site motif, but have an Asp instead of the usual upstream catalytic Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs.	2.95534e-60

>NC_023063.1|WP_024071771.1|155371_156823_+|transcription-termination-factor-Rho
MLSGKRKRTRYVSRKSSTKNAVVQLEADVLNKEEDEVVKVELQEEIIEGRADDQVSGQEVKVLDLSELKKKTIEDLLKIAEDLGVVSNGRMLKQEIIFHLMKKVVSDGGAAIGGGVVEILSDGFGFLRSPEANYAASGDDVYISAGQIKKFNLRTGDIVSGEIRAPSEKERYFTLVKAHSINFTDMAKLQRYVHFDDLIPLYPEERILLECNDPISLNKKDISMRVIDIVAPLGKGQRALIVAPPRAGKTIILQQIAHSISVNHPDIELIVLLIGERPEEVTDMCRSVKGEVVSSTFDEPGYRHVQLAEIVIEKAKRMVEHKKNVVILLDSITRLARAYNSVIPSSGKVLTGGVDSNALQRPKRFFGAARNIENGGSLTIIATALIETGSKMDEVIFEEFKGTGNCEIILDRKISDKRVYPAIDISKSGTRKEDMLIDNVCLKKVWLLRRLLSSMGSVEAMEFLRDKLSITKDNNEFFDMMNS
>NC_023063.1|WP_024071770.1|154359_154992_+|DUF1013-domain-containing-protein
MSNSNVSLTHNHKESSSTLEDSGPLMPRAVAVWLVDNTILTFEQIAKFCNLHLLEVKGIADGEVAKGVVGCNPITMGQVTKEEIECCQNDPTRIPRLISYRNFKKSKKRAVRYTPVARRRDKPDAVAWILKYCPEMQDVCIAKLIGTTKSTITAIRNKEHWNSTNIKPRDPVLLGLCTQVDLDEAIMKAQIVAERERRVKNIRTNDFSVP
>NC_023063.1|WP_024071769.1|153800_154001_-|50S-ribosomal-protein-L35
MPKLKTKSSVKKRFSVTATGKIRSTQSAKRHGMTKRSKRSIRVQRGTTIMNSSDSRIVKLFMPYSR
>NC_023063.1|WP_024071768.1|153400_153775_-|50S-ribosomal-protein-L20
MARVKRGVTTRARHKKVIKLAKGYRGRSKNCYRIALQRVEKALQYAYRDRRNRKRFFRSLWIMRINAAARQYGLLYSDFIHGLSLANITLNRKILADMAVNHQDNFKQIVNLTKEALTKHRVVQ
>NC_023063.1|WP_024071767.1|152370_153414_-|phenylalanine--tRNA-ligase-subunit-alpha
MSYSNIYGLQTEATNRILSSSSLEELENVRLYYFGKSGIITTCLRNIAAVSNIEERKSIGSSINAICAELKSLINSQKEKLHKIQVNTQLMQDTVDISLPIRPKQIAKLHPISKTLHEVKHIFSSLGFKLSDGPELEDEFHVFDALNTHKYHPAREENDTFYLKTLVNQKRVVLRTHTSSVQIRVMQSNKGNYPIKIIAPGKVYRNDWDATHSPMFHQIEGLYIDKNVNMGHLKYCIHYFLKKFFGENIQIRFRNSYFPFTEPSAEVDIKSSNRDWIEILGCGIVHHNVLTNVNIDPDQYSGFAFGIGIERITMLKYNIGDLRKFYSNKLQWLAHHGFCFSNLITTC
>NC_023063.1|WP_024071766.1|151678_152377_-|SDR-family-NAD(P)-dependent-oxidoreductase
MLKTTHQKGALITGGARRLGRAISIFLAANGYDIAIHYNTSKEHALQTKDIIEKLCNRKCILIQADLTEFDSLNFLIEKTFQLIPHCNCIINNASVFYKNTLMNTSIKDFTNHYNLHIRAPLFLTQYFAKKCITIGNVINMIDVMVIKDSTKHFIYTMSKKSLLDLTKFTAVELFPKIKVNAIGPKMISNNFLDNVNYHNILDNPEVKTILTRIAELLDINNNETGTVNFIQ
>NC_023063.1|WP_024071765.1|151172_151343_-|Trm112-family-protein
MFDHKILEILVCPLTRDKLQYNKDTNELISQRAKLAFPIRNGIPIMLIDEARKLEE
>NC_023063.1|WP_024071764.1|149674_150943_+|MFS-transporter
MNLKRAVLSTIMCNTLVWYDYVLFGNLVSVISKLFFPAEDRYFSLIMTFSIFAVGFLMRPFGASIFGYIGDKYGRKAALTLSIIAISVPITFISILPTYEKIGILSPILLIICRLMQGISLGGEAGNATFLIEHSKKGKNIGFFGSFETLSAVLGSIIALFMILLSQYFTGENFEVWGWRIPFVIGLLLGLVSVYIRRITGESPAYDTHKESNNLSQSPFLELFKKYKRPLVLATCIDCIENCSFHIFMVFFITFIKEFSDIHLSFNASSISIIESFNIMICGVLNVFFGYISDYVGRRKVMLIASISLFCVAIPVFWLLSQDSYIALIIAYLIFVIPFSATLGPASGAMSELFPTKVRYTGFGLSRNIASAISGGMAPVVCTWLIRATGLTFIPGVYVMFWAVVAIVALCQIRKKDVYADW
>NC_023063.1|WP_024071763.1|149165_149429_-|30S-ribosomal-protein-S16
MSVKIRLARFGAKKRPFYRVVVADSRVARDGKFIESLGFYNPMLPKEHELFVKVKVDRLKYWLSVGAQATDRVSWFIKKGIINIEAV
>NC_023063.1|WP_024071762.1|147370_148414_+|Fe(3+)-ABC-transporter-substrate-binding-protein
MIRLITCFSIIAVIMLAFNFFTKRQQVQNSGQEVRVYSSRKEELLHSLFEQFTKETGINVQYINDEAAQLINRMENEGTATSADVFLTADAVNLILAKKNGLLQPVQSEVLNQAIPSKYRDSDGFWFGLTKRARVIVYNKDVIEESELSTYEYLANTKWKDKILIRSSSSPYNQSLIAFMIANNGIENTKIWIKGLVSNMARKPSGGDIDQIYAVAADEGSIAIVNSYYFGRIAASNKKSDQAAVKKLGIFFPNQETTGTMINISGGAVTKHAKNKQNAIRLLEFLASVKAQRVYAQVNQEYPVVEGVEISDVLKTFGVFKESNLPLQELEEHLTESVKIADECGWR
>NC_023063.1|WP_024071772.1|157642_159058_-|dihydrolipoyl-dehydrogenase
MTKHEFLIIGSGPGGYIAAIRAAQLGYDVAIVEQENTLGGICLNWGCIPTKSLLQSASIYHNIRKADIFGITIKDVKFDFNKVIERSRNVVDKLSNGISVLMKKNNIKVYHGTAKLLGNSTVTITDLSNKTINITSTHIILATGSKAKSIPGIDFDNNIVWNAKNAMIPDKLPESLLIIGSGAIGVEFASFYNTFGTQVTMVELKDNILPLEDHEISECMHNILSNKGIKIHTKSSVTKLEKFNNYAKIQVSNKIHLQVDKIILAAGVQPNSNNIGLENTQIKTDSAGFIITDQYCYTNEPGVYAIGDVAGPPCLAHKASHEAVLCVESIAVKENKITNSQHKVHPINKSNIPSCIFSIPQIASVGLTENQAQNQGYTTKIGKFNANCSGKAVAIDETEGFVKVIIDKSTGELLGAHMIGAEVTEMINGYVIGKQVEATDQDIISSIFPHPTLSEMIHEAVLSSDNSSLNS
>NC_023063.1|WP_024071773.1|159276_162033_+|hypothetical-protein
MKTLQKSIEMTVNETSSNQDGTQNKISILNAYSVNFVQRDNTIFSAYYVKRAFVGHDLICEIRHGNSTYHVKVNDDSILDRVVKNYLPGMLSVKGVDNDFLIIALSEGVLRGYKIKSTVSLKIYKVRYSPNITLFDMGKIPLSNSVNSLKEEVKYPVVLYQSRVDTVVIIGRVDNDDRAKLPDRFYVMWRMQYHDGKFQLIKPMTRGIKFNSKYLFKYSGYIGYGKYSDKLIMVSDFKRHLNLLYVGKYLSAGQKFFSSLYEISVDYNLNLNIAECLINHRYGCNLADSARYDIPMSGIDVISAVRNGEDTYVAYVGVVPDGKFKNDDQLVVVHSKAGNQLSIYDFMQIKEHIASLYVKHVENSIIITIVGLDNIIKYGIPELQLRSGNITHIDVIQFSRHEVTNIADFVHVVTQDVLLADAYAKVRTVEAKKTDNNYMAHMSFSIREVQSKDIFTTMQSHISTDSINMPVYEVTTPTSYMTTYDLLKESEGLQEVTSNLNSTARVNVEHMTTGSLPYVSSDSKKEIKKSTLYYGSHVIPSTTQSVILTTDSSTKSSVGNNTADFVGKVLVSTNHNHSTAKVNVEHMTTGSLPYVSSDSKKEIKKSTLYYGSHVIPSTTQSVILTTDSSTKSSVGNNTADFVGKVLVLTNHNHSTAKVNVEHMTTGSLPYVSSDSKKEIKKSTLYYGSHVIPSTTQSVILTTDSSTKSSVGDNTADFVGKVLVSTNHNHHVSSVTRIPAQSTTVKRAKFTTGKKYIGKASDVEYGVLNKKTNHKIRSTTRSSLRSKSTLRRHVFYDEDLETTNDYAVTGRLNFTTTSISRSESFFLTNDSISRNKTYPVNYNSSNHGLLVGGIFIVGLIIMLFVGVFYNKFGCNRLRRNLTRCMDRSSRGCNIPELQVFELSDMQEIVGIQIPNRIAY
>NC_023063.1|WP_024071774.1|162518_163967_+|hypothetical-protein
MSFFSEVSKNKVVISVGDNGAVILNIVNGAIRDKYFIKNEQDIDFSKVVSCIVECKKSRVYLVLNHSDQIYTEHVIPAYSRIIARSLVKMNLSKVIGDCEIGTAFLLTKPDALNKSWHYMVATSRLNKLSKKLLEIITDNLCNFYGILLFPIELSYLCDKLLKFQGKDNEGWTILIAYTKTNDFRQVVLYKGKIVHVSTIVMTEDEMLPSIIAGKVYQEISDTILYLAKFGYSKESVINLYIIASSDIKTSLLLFDFKNVDKSIFTPYELSKVLVLKQSSSIMSEFCDTVVLCAITEEKPLKIFHTKSTKLFYRIFFFNKYFIPSLLCFVLLMSLLNIAYMFNVNNSYDERIELLLSKEELVSRVEKMDQDAQVRQISEMYETIDVYKLLSADDFFSFDLILQLRKIDLQGFKINYLSFDTNSGGITVKLLLKFVEDKQFLYYFNDLKDKMIKEFEAYKVEVIDIAPNISESQKIVVVKLEK
>NC_023063.1|WP_024071775.1|163971_164598_+|hypothetical-protein
MNSKLLKRYCIIKVSVCIMLLFTLSMTLHYLYESNAYMAQHNSRIADEIQKLRFKIMNVHKHEAMLNDSGVLWQEISTSNIYSTFYENNLGTLISNLFKKYYLFNFQINISSPKVVSDMYNKQHINVIKRHIEIRFSSISDEQVFLFLNAIYHDISGYVKVISLSIEKKTDITNEVLQAALKGETIPIVRGSIVFELYNIVGRFVNEN
>NC_023063.1|WP_024071776.1|164587_165127_+|hypothetical-protein
MKISVILPIMVLYIMMFSTRCEAKKHGCLGLIYALNHCTNYTCEMDFFTDKIQYTVFGLRNNSCKFMEKDDSGLTLCYIPQEKLKVMSEYLVRVITSNLSVNTNKIEDVLFEVCNFYSTIQESLIPENEEVTEQNVSEIKHAAELKRRNINISKIKSIFFPDVDVLKLHTIYAQSQNME
>NC_023063.1|WP_024071777.1|165576_166368_+|MBL-fold-metallo-hydrolase
MKITILGCGSSGGVPIVGCKCDACSSSVRYNKRMRSSILVESKDTQLLVDTTPDLRFQALQNNLSSVDAVLYTHFHSDHCDGISDLQPFVPKHGLNSIPIYSDMNTLCLLTASNSYFFIPSAYTSTWKRCHHLTVNVIYHYKEFTIKDFRILAIRQLHGISDSNGFIFNDKVAYCTDVQSFPEESCKFLYNKKILILGCLKYDASFAHSHVDLCLDWIKEFKPEIAVLTHMSHYLEYYSLVDYVRSHSKDNIIVGYDGLQLNV
>NC_023063.1|WP_024071778.1|167321_168119_-|glutamine-synthetase
MLNYTLDYLSTKFNITPLIGIELEFYFDNINSNDISSLVTNIKERIYPFNCNITKEQDNLQYEIQTSTTTKIPNFILEINLIKEILADSIKHFGGSINFSAKPYLDKPGSAFHIHINLLDSNNNNLFSNQHDKMSDYLSYSIGGLCYLMKKHMIFFAPNHNSYLRYIHADIDTPTTISWGGNNRSASIRIPSTSTDPTKCRIEHRVPGADCNYNQAITSVLQGIIYGIEKKIQPPPKIYGISSDTQYKLEKLPLSLNEAVRYHIK
>NC_023063.1|WP_024071779.1|168125_169250_-|phosphate-ABC-transporter-permease-subunit-PstC
MIFVTILLSIALLIGNYHKAKLTFEDKFNMITSLNIVYPFIVCYSLYTQHLNIAFILVTFIILILILIAAYIDKEFLLLKLIMFSSVGLLSLVVICIVLCLTYESALFFSKIPLTDFLFGINWQPDSNIIDGKPVGSFGILPLLSGTLLIVIVAITIAVPLGLFSAIYISEYANKKIRYITNTILEILAGIPTVVYGYFAVVFLSPSIRSLAKYYNLNAQSENALVAGLVIGIMILPLITSLIENAIHSVPKTLRYGSMALGASRADTIWNIIIPYALPNIISAIILSISRVIGETMIVLMAAGITAHLSFNPLHAVTTITVQIATILTGDQNFNSIQTSSAYALGLTLFIITWLLNLLALHITKKATRSIKVH
>NC_023063.1|WP_024071780.1|169406_172070_+|alanine--tRNA-ligase
MIKNNLVSNLRKLFIDFFAKNGHQVFPSSPLMVTDDPSLLFTNAGMVQFKQMFIDSNNASIETAVSSQKCLRVGGKHNDLENVGYTNRHHTFFEMLGNFSFGHYFKEGAIEFAWNFITKELSLNKNKLYFTVYHDDQEAFDLWKKISGVSDNRIIKIKTNDNFWSMGNTGPCGPCSEIFYDYGDNVKGGLPGTLEEDGARFTEIWNLVFMQYDRKLDGELCALPKKCIDTGMGLERITAVMQGVYDNYDISLFKDLIEVSKKQSGDSTNELAHRVIADHVRSAAFLIAEGLTPGNEGRDYILRRIIRRAARYVYMLKYDGALMYQIFPTLIDEKSCGYMADYYPELLHAKDLIISVLKIEEENFRDTLVRALPLLEKELVNLSSGDVLSGDIAFKLYDTYGFPVDITLDVIKEKGVKFDEQGFYDNMRKQKERSRLNHSIKSDQQLKGKFWTDIKQYCGDTKFIGYERCNAIAKVVSIVHGHDKSTEVAHVEDKVDILLDITPFYAESGGQKGDIGTLRVVVRHEKELLDNNNVAEVINTKKILDTLYVHECVIKRGSIMVGDIISAEVDDERRKNLCANHSATHLLHYVLKSEIDNSIMQKGSLVSDDKLRFDFSYGMALTNEQLTLIEDKMYLLIRENSPVITDICDLKDAIAEGAVALFTEKYEEHGVRVVNIKNSKELCCGTHVKYTGEIGCFKIISEASVACGIRRIEAVTGQYAINYFRQQEKMLYSIAENIKTPIDNVLVQIDKLNKSNQELKQKLSDVYFSVIKLQGISAEKIGNIDFLYSSLSDVPIDIVKKFINRYLTDSGIILFSNVVDHNVIYTIGVGSSLHSKVKAVDFVKIIGSIMKSKGGGNAQLAQISGEYVKEVDIISHVKNKLISIFND
>NC_023063.1|WP_024071781.1|173176_174064_-|succinate--CoA-ligase-subunit-alpha
MSILVDSNTKVICQGFTGAHGTFHSEQAIAYGTNMVGGVTPGKGGTYHLNLPVFNTVKQAKLEVGANATVIYVPAPYAADAILEAIEAEIEIIVCITEGIPILDMVQVKRALVNSASILIGPNCPGIITPEECKIGIMPGYIHKRGHIGVISRSGTLTYEAVAQTTEVGLGQSTCIGIGGDPIHGMSFTDCMKLFINDPDTHGIIMIGEIGGSEEEEVAEFIKLSGTNKPIVGFIAGKTAPTGKRMGHAGAISSGTSGSAEGKIAAMKNAGIIIAETPAVIGRTMLEAMNNKTKS

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NC_023063_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_023063_3

968541-968635

Orphan

Consensus_repeat	Method
GTTCCATTATAACATTAGGAACATCTGGCCCAGGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_023063_3

>merge|NC_023063|3|968541-968635|CRISPRCasFinder
GTTCCATTATAACATTAGGAACATCTGGCCCAGGACCATGCTCCCGTAAATAGTTCAGATGTTCCATTATAACATTAGGAACATCTGGCCCAGGA

>NC_023063|3|3|968541-968635|CRISPRCasFinder
GTTCCATTATAACATTAGGAACATCTGGCCCAGGA	CCATGCTCCCGTAAATAGTTCAGAT
GTTCCATTATAACATTAGGAACATCTGGCCCAGGA

Protein	Signature genes	Signature genes Name	Protein_function
NC_023063.1\|WP_158407226.1\|953309_953588_-\|hypothetical-protein	unknown	unknown	unknown
NC_023063.1\|WP_024072367.1\|975302_976028_-\|DsbA-family-protein	unknown	unknown	gnl\|CDD\|372611
NC_023063.1\|WP_024072370.1\|977930_979169_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340877
NC_023063.1\|WP_144445939.1\|967564_967996_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|165123
NC_023063.1\|WP_024072356.1\|961508_961919_+\|hypothetical-protein	unknown	unknown	unknown
NC_023063.1\|WP_024072368.1\|976113_976626_-\|protein-export-chaperone-SecB	unknown	unknown	gnl\|CDD\|180234
NC_023063.1\|WP_024072364.1\|970753_971356_+\|riboflavin-synthase	unknown	unknown	gnl\|CDD\|236455
NC_023063.1\|WP_024072355.1\|960312_960885_+\|hypothetical-protein	unknown	unknown	unknown
NC_023063.1\|WP_144445938.1\|965861_966293_-\|hypothetical-protein	unknown	unknown	unknown
NC_023063.1\|WP_024072365.1\|971929_973333_-\|2-nitropropane-dioxygenase	unknown	unknown	gnl\|CDD\|240081
NC_023063.1\|WP_024072363.1\|970181_970535_-\|hypothetical-protein	unknown	unknown	unknown
NC_023063.1\|WP_024072369.1\|976746_977391_+\|Tim44-domain-containing-protein	unknown	unknown	gnl\|CDD\|214950
NC_023063.1\|WP_024072366.1\|973922_975188_+\|insulinase-family-protein	unknown	unknown	gnl\|CDD\|223685
NC_023063.1\|WP_024072359.1\|966691_967264_-\|hypothetical-protein	unknown	unknown	unknown
NC_023063.1\|WP_024072371.1\|979237_979846_-\|dTMP-kinase	unknown	unknown	gnl\|CDD\|237574
NC_023063.1\|WP_024072351.1\|955321_955651_+\|hypothetical-protein	unknown	unknown	unknown
NC_023063.1\|WP_158407227.1\|953604_953790_+\|hypothetical-protein	unknown	unknown	unknown
NC_023063.1\|WP_024072357.1\|962431_965836_+\|transcription-repair-coupling-factor	unknown	unknown	gnl\|CDD\|224118
NC_023063.1\|WP_024072372.1\|980105_981077_-\|ACP-S-malonyltransferase	unknown	unknown	gnl\|CDD\|223408
NC_023063.1\|WP_024072353.1\|957582_958986_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226406

Protein	Function_ID	Function_description	E-value
NC_023063.1\|WP_024072367.1\|975302_976028_-\|DsbA-family-protein	gnl\|CDD\|372611	pfam13462, Thioredoxin_4, Thioredoxin.	1.25387e-49
NC_023063.1\|WP_024072370.1\|977930_979169_-\|MFS-transporter	gnl\|CDD\|340877	cd17319, MFS_ExuT_GudP_like, Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily. This family is composed of predominantly bacterial transporters for hexuronate (ExuT), glucarate (GudP), galactarate (GarP), and galactonate (DgoT). They mediate the uptake of these compounds into the cell. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	7.92792e-12
NC_023063.1\|WP_144445939.1\|967564_967996_-\|hypothetical-protein	gnl\|CDD\|165123	PHA02756, PHA02756, hypothetical protein; Provisional.	0.000384762
NC_023063.1\|WP_024072368.1\|976113_976626_-\|protein-export-chaperone-SecB	gnl\|CDD\|180234	PRK05751, PRK05751, preprotein translocase subunit SecB; Validated.	1.55592e-55
NC_023063.1\|WP_024072364.1\|970753_971356_+\|riboflavin-synthase	gnl\|CDD\|236455	PRK09289, PRK09289, riboflavin synthase.	5.66235e-94
NC_023063.1\|WP_024072365.1\|971929_973333_-\|2-nitropropane-dioxygenase	gnl\|CDD\|240081	cd04730, NPD_like, 2-Nitropropane dioxygenase (NPD), one of the nitroalkane oxidizing enzyme families, catalyzes oxidative denitrification of nitroalkanes to their corresponding carbonyl compounds and nitrites. NDP is a member of the NAD(P)H-dependent flavin oxidoreductase family that reduce a range of alternative electron acceptors. Most use FAD/FMN as a cofactor and NAD(P)H as electron donor. Some contain 4Fe-4S cluster to transfer electron from FAD to FMN.	2.14083e-14
NC_023063.1\|WP_024072369.1\|976746_977391_+\|Tim44-domain-containing-protein	gnl\|CDD\|214950	smart00978, Tim44, Tim44 is an essential component of the machinery that mediates the translocation of nuclear-encoded proteins across the mitochondrial inner membrane. Tim44 is thought to bind phospholipids of the mitochondrial inner membrane both by electrostatic interactions and by penetrating the polar head group region.	5.17067e-36
NC_023063.1\|WP_024072366.1\|973922_975188_+\|insulinase-family-protein	gnl\|CDD\|223685	COG0612, PqqL, Predicted Zn-dependent peptidases [General function prediction only].	1.49879e-121
NC_023063.1\|WP_024072371.1\|979237_979846_-\|dTMP-kinase	gnl\|CDD\|237574	PRK13976, PRK13976, dTMP kinase.	6.50496e-131
NC_023063.1\|WP_024072372.1\|980105_981077_-\|ACP-S-malonyltransferase	gnl\|CDD\|223408	COG0331, FabD, (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism].	3.53726e-98
NC_023063.1\|WP_024072357.1\|962431_965836_+\|transcription-repair-coupling-factor	gnl\|CDD\|224118	COG1197, Mfd, Transcription-repair coupling factor (superfamily II helicase) [DNA replication, recombination, and repair / Transcription].	0
NC_023063.1\|WP_024072353.1\|957582_958986_+\|hypothetical-protein	gnl\|CDD\|226406	COG3889, COG3889, Predicted solute binding protein [General function prediction only].	8.0079e-05

>NC_023063.1|WP_144445939.1|967564_967996_-|hypothetical-protein
MLNSVGSNVLNNVVNGTSSATVGPNVVGNTENSYTAVQVVVVIGAAILLLLGLCCINYVCRYREHRVRRLRRMNYLREHGPGPDVPNVIMELDVVHNAQSRENQSQCVESSPFICNHGGQENGDTGDDHQVRPVFRLQGVFPR
>NC_023063.1|WP_024072359.1|966691_967264_-|hypothetical-protein
MASVTLGISNSVLLNNTVNTEGIVVLQQVFFRLSNIGTGVFVDAVNGTVRNSTNGTTTVSTVMNVSDNSSLSSTSSVDGQMFHHIIETCMALCLPALLFIAIVVYKRVSRYRGRVAQNRRAIRYLREHGPRPDVPDVIIALDVIHDAQNSEDQNQCVESRPFVRSHSCQENDDTDSQARSVFRLQEVFPR
>NC_023063.1|WP_144445938.1|965861_966293_-|hypothetical-protein
MIYNAISGTVENSNVTTISSTMLSTNGSSILNHRDNKIQTVIVVGLLLLTMLLVLAYCVLHYRDAGARRRNVLRYLQIYGPRPDVPNVIMELDVIHNAQSRENQNQCVESSPFICNHGGQENGDTGCNHQVRPVFRLQGMFPR
>NC_023063.1|WP_024072357.1|962431_965836_+|transcription-repair-coupling-factor
MSNTNKISNIPHTLEPLVIIKMYAQKLIHSAVYIVNKEIQLYNLASIFKFYIPNLEIIIFPAWDSIPYKKNSPHNSVMAERIKTLHSLITKCNDTPYIIISTINAIVQKVLHQNIILQSVLKIRSQQNITRDYIENYLIYHGYSQYSIVRDIGEFAIHNNVIDIFPITYKNPIRIHLHDNFIQSINFFNYQTQSIDNNSSLNEIFIYPTSEIIKQKENIDLFSKIYKTKASQDKNLLDTITSGKKYIGEENFLPLFYQEELQNIFNYIPQNTTLIFNDKLAKEIEEYNNQIYSHYRSQLSYQIPPHQLYINLKDFQTITKQFHKIEFSQSENTTNNLAMTHKNAHNTAFDVTIKIQTIPNFKILAQNKKIDIFEILAQYIQTICHTKKLIIACYSIGSLEYIQNRLRIFNIKLCKIENYQEIHSSHNIAILPIDHSFISKHTIVVAEHDLLNKQEIIGKSNISNIISNDTNIDIGDIVIHKDYGIGKIVELDTIKVFDSYHDFIKIEYYNSDKLFLPVENINLISKYGQQNANVILDKLGSTSWQQRKTKIKNHIKKIAKELLATEASRRLSTGKLFLPDENYKHFCNEFTYIETEDQLQAIKDMEHDLSSGRIMNRLICGDVGFGKTEIALRAAFLVASKNHQVAIIVPTTLLCRQHFIVFTERFKKFPNIKIKQLSKIVERSEIKRTKESLACGQVHIIIGTHAILAQDITFANLSLLIIDEEQQFGVKQKELLKKIKTSIHVISLSATPIPRTLYMSLCGIKDLSLIKTPPKNRVPVTTCTTYYDETIIKDAIIREHNRGGRVFYVCPQISNIESINDNLKKLLPEIKINIAHGQLPSSQLDTIMNDFFDGKFTILLTTSIIECGLDIPFANTIIIHDADMFGLAQLYQLKGRVGRSSIKGFSYFILSEKATNTSAKRLEIIQSIDSINSGFTLSLHDMDIRGFGNLVGEEQSGNIKDIGIELYQQMLEEELNTHNENPQDLDHINININVNIRIPEHYIKDIGLRMRVYKKIGNLKTKEDIDNYYIELTNKFGKLPSEVENLLNTIYIKQLCASIGICEVEQVKNTIILKIDSNTTVRQEILNYFINNPLTFKIQNNSILMLINNTCNCTISFIIHHISKINSLNKEALN
>NC_023063.1|WP_024072356.1|961508_961919_+|hypothetical-protein
MYTPRNRRGIFARFMAYIFNYTTRVLQWFGILSPPSITDTPSTHRETENDPQSSSTVEVTIQSPGNISCSSSDIEILQESDSEFLSDIEILSHESDLESDFEVVSECDVEVENEGSPSNSITNTALHPTQSNCRIM
>NC_023063.1|WP_024072355.1|960312_960885_+|hypothetical-protein
MRPSDLFVINSSLVQRIKHPQFSFSSMNHEESIKVKLFKFITPRNAMICFRFGLFNVVSVPVMLGFFPYYMYTKLYSENNPDYNGTSRIEYPIIIISITLLLVVFSLLFGVACVVVSIPMLLVSLLLLPFRKCCLPTVNQHHSEGNPHYKQTSTSDEDYDDSSSSEYSYSTAATECSLVLSEKTNMLHID
>NC_023063.1|WP_024072353.1|957582_958986_+|hypothetical-protein
MPNDTTNTFTSTNNAIATTNSTTSSSQFTTETTNSIISTILDTTSRVNSTLSNAISTAVDTISSLLQYVANTTTQFIYNTTNTTNLPTQTNNTYPTSHTTEPSSTITSVLTTTRDMISNPANNATSIASTVSNSSSTTTTTTNPFNSTTSSSNFITTNNTTASQDTDIQQLIQIFIACFAVLLLIIIIHHVNRPRSTQNIHRQRWQNRSIEEGILYQLPTAQSRSTTLTTEYALRLLDDACQDTASTTNNSQEDLTVEYALRLLDDACQDTASTTNNSQEDLTVEYALRLLDDACQDTASTTHNSQEDLTVEYALRLLDDACQDSASTTHNSQEDLTVEYALRLLDDACQDSASTTHNSQEDLTVEYALRLLDDACQDTASTTHNSQEDLTVEYALRLLDDACQDTASPSDNNQEEGHVALREALHPLNLTYQECEASLSTNRSSLPNNILSNNITSSCNNNKVIKN
>NC_023063.1|WP_024072351.1|955321_955651_+|hypothetical-protein
MPTSPNVSTSSPINATANTNELAFRITTYSLLCITALILLAITFYAIYKHKKKSGRNKGQNYTSTSDQSDDTIWTPKFFYLDDDNKLRISIRCEEYRDIREGRIPRVIE
>NC_023063.1|WP_158407227.1|953604_953790_+|hypothetical-protein
MRCEQYVDMSKYRLSRVIEEEEEVAEEETMEENNQAIQASIDSTISDVVIIHTNGAHKTLE
>NC_023063.1|WP_158407226.1|953309_953588_-|hypothetical-protein
MSSKNILWFKLRSHDVLVRVSVFFLFENSLYNTIIINISSTTKHTKHNKTCGRFCLSIVVSMGLLVGVLAVDVVMLDVLDDVGISYINFSIA
>NC_023063.1|WP_024072363.1|970181_970535_-|hypothetical-protein
MLNNSNSVVSYVERNLSNYNTSVMDITFDYPINKNEFFPRDFNNIGAGKDDFFVAAIIAFYVLTVVVVAGFMLWIQNRDIMRRNDYTKCLCRTSSMLERAETEQEVFATIISDNIKQ
>NC_023063.1|WP_024072364.1|970753_971356_+|riboflavin-synthase
MFKGIIENIGTVTQIDDIKGHDKRITIKPTNPNFLNETKIGDSIGCSGICLSVVELNNRCFVVDVSDATLSVTSATHWKEGTKINLEPALRMTDRIDGHFVQGHIDGIGKIISITSVNSSHNIEFYIPDSLLKYMIIKGSIAIDGVSLTINSISNEILSVNIIPHTWENTTFQYNKVNDTINIEADMLAKHLERLYNIKI
>NC_023063.1|WP_024072365.1|971929_973333_-|2-nitropropane-dioxygenase
MRKKIKKILISGKSVWPIIEGGKGIGVSDGRTAGAFAAASAVGTFSGACARLVDDNGEHVPLVYRGKTRLERHNELINYSIDAAVSQAKVAHEISKGLGRIHMNVLWEMGGVQRVLHGVLDKARGLIHGITCGAGMPYKLAEIASQYQVYYYPIVSSMRAFKILWQRSYQKFSKKLLGGVVYEDPWLAGGHNGLSNSESPDSPQDPFERVAAIRAYMNEVGLSDVVLIMAGGVWHLKDWELWLDNDLIGPIAFQFGTRPLLTQESPISSGWKKKLMSLKPGDVFLNKFSPTGFYSSAVKNEFIKELKERNARQIAFENEMTEKCTAELSIGGRGRKVYVHPEDKKLSESWMAMGYTDALKTPDNTLIFVTQNKSRSIREDQINCMGCLSHCKFSNWKDHGDYNTGIKPDVRSFCIQKTLQNIIAVDNHEYELMFSGHNAYKFVEDEFYRDGYIPTVKELVDRILTGY
>NC_023063.1|WP_024072366.1|973922_975188_+|insulinase-family-protein
MSPKITQLNNNFTIITDTMPHVESVSINIWINVGSRYENQAITGISHFLEHMAFKGTKTRTALDIAQIFDDIGGNFNAHTDREHTVYHVKTLKRDIKIAIEVLADIILNSQFPEEEIDKEKGVVLQEIYQTNDSPTSIIFDKYIEAAYPNQIFGKSILGTPESVNSLSKVDLHTYMSKYYHAGNMLLSVAGNILHEEVVDLVSKYFSHMKKSERKTADPSTYLSGEYRETRNLEQVHLVIGFPSVSYKDDQFYTIQILDSILGNGMSSRLFQKIREQLGLVYTISSFNSSYSDNGIFSIYAATDKGNLSQLLTTIASEVKNITTNLQENEVKRAKDKITSEILMSRESTNARAESLGYYYSHYNRYISKEELIKQISIITVTDIQNCINNLLGSNNKITLAAIGQIENLPSYNDIAQMFYI
>NC_023063.1|WP_024072367.1|975302_976028_-|DsbA-family-protein
MKVLVIGKLFFLFVVAFFFNFAFCSDDHKQELSQKFYSDTLVKSSDDITAQELLSLLPSDRFIGNTKAPVVIIEYASFSCMHCAHFTLNVFPELNRKYIRTGKVLYIFRNFPLDYISLKAAMLGTCYNTANSFFTYTKAVFSSIEALVTHYKDLGVLSNIAKVSNISDERFDKCINDEDIMNYIVQEKFVANRKLQVNATPVFFINGKKYDKPHDIESFSETIDELIILHPNYSLVKGDGS
>NC_023063.1|WP_024072368.1|976113_976626_-|protein-export-chaperone-SecB
MSCKLKVKGQYIKDLSFENPNSPQIFLMISKTPPEINISINVSSVSLPIKAQDQENEQSLDSKVEPLYEVTLQVNAEARVGTTVAFICEVKYCGVFCIEGYDVSNIQELSQEEMRKILLVSAPTVLFPFARELVFNITSRGGFPPLLLDIVDFGVMYESQMKQNDNNQDL
>NC_023063.1|WP_024072369.1|976746_977391_+|Tim44-domain-containing-protein
MVELAIYAFLAAFIFFRLYNSLGKTSGLQTTNHSQTISIIMEDTQKYDDDDADIDIESVMEACNENDKSIINYIKKKDSEFSLKHFVDGSVKAFEIIIKAFNEGNAHILSMLLDTNLYNSFVEEIENRKALGQLYKDIIVSIISHKITKLDLSGNIAYITVKFITEQINFVKDSDDNILQGSTSKINKIEDTWTFKKDTTLSNKKWYLSAIQSV
>NC_023063.1|WP_024072370.1|977930_979169_-|MFS-transporter
MRDVLNRKFLSWFLVSMFYAYQYILRVMPNIIGSMSMEKFKISAMAFGQFSGLYYIGYTLAHIPIGIFLDKYGPKIVLPICVVLTIMGLVPLLVSDVWLFSQIGRMITGIGSAGSALGLFKVASMYYGNRFVKMSGISIIIGLLGAMYGGLPVLSLLNKFGWETFFIVFIAVGAAMALLLYLCMLPYDQVANLDSNKSLCDKVKLVIFNKYIIIISLLAGFMVGPLEGFADGWVTSFLRAVGNIDKETSALLPSIIFIGVCTGAFILPYMLEDKSFNAWNILIISAFGMMIPFLILYINSSSIVLVTILFFLIGFFSAYQIIATCKVLSYVNDSVVALATAVNNMIVMAFGYFFHTAVSCVIVLLWDGKVMDAEPVYTKALMLKSMLFIPGGLLVGAIGFMSLKYLSRKESK
>NC_023063.1|WP_024072371.1|979237_979846_-|dTMP-kinase
MFITFEGIDGSGKTTQSRLLAEYLSEIYGINNVILTREPGGTLFNESVRDLLFQAQGLDNLSELLFFIAMRREHFAKVIKPSLIQKKIVICDRFIDSTIAYQGYGQGIDCGLISQLNDLVVDVYPDITFIIDVDINESFSRSCKNGYEFADLEFYYRVRDGFYNIVKKNPYRCHIITDKNNTYNIDSINFIHLKIIEVLQMV
>NC_023063.1|WP_024072372.1|980105_981077_-|ACP-S-malonyltransferase
MIFMFPGQGSQFVSMGKNIYDNFAVARYVFHEVDDILNKKLSKIMFEGPIENLTSTDNAQLALMVASIATLRSIEYILGKPIHLFENVKYMTGHSVGECIALCASGALTLYEVTQLLLVRSQAMYDAVPLGYGGMSALIGGNLSDVENVVKMAQEYGVCEIANDNCDGQVVVSGVKAALEKLPDLIKDTGIKKVVKLQVSGPFHSSLMNSACEKLQEFVESIRDIKMPLVKVVSNVSAREYTDCLTIRSLIAKQLVSRVCWRESILYIIKQGGTHFIEVGAGTTLSGLVKRISSDVSAVSVNTASCIDSVMQYFTVNTGLIDA

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NC_023063_2	2.1\|157202\|55\|NC_023063\|CRISPRCasFinder	157202-157256	55	NC_023063.1	1007239-1007293	0	1.0
NC_023063_2	2.1\|157202\|55\|NC_023063\|CRISPRCasFinder	157202-157256	55	NC_023063.1	1007506-1007560	0	1.0
NC_023063_2	2.1\|157202\|55\|NC_023063\|CRISPRCasFinder	157202-157256	55	NC_023063.1	1007640-1007694	0	1.0
NC_023063_2	2.1\|157202\|55\|NC_023063\|CRISPRCasFinder	157202-157256	55	NC_023063.1	1007774-1007828	1	0.982

1. spacer 2.1|157202|55|NC_023063|CRISPRCasFinder matches to position: 1007239-1007293, mismatch: 0, identity: 1.0

tttagtttaataatgtgtcccgtgtttctgtagttgctaagtaaaaaaagagctt	CRISPR spacer
tttagtttaataatgtgtcccgtgtttctgtagttgctaagtaaaaaaagagctt	Protospacer
*******************************************************

2. spacer 2.1|157202|55|NC_023063|CRISPRCasFinder matches to position: 1007506-1007560, mismatch: 0, identity: 1.0

tttagtttaataatgtgtcccgtgtttctgtagttgctaagtaaaaaaagagctt	CRISPR spacer
tttagtttaataatgtgtcccgtgtttctgtagttgctaagtaaaaaaagagctt	Protospacer
*******************************************************

3. spacer 2.1|157202|55|NC_023063|CRISPRCasFinder matches to position: 1007640-1007694, mismatch: 0, identity: 1.0

tttagtttaataatgtgtcccgtgtttctgtagttgctaagtaaaaaaagagctt	CRISPR spacer
tttagtttaataatgtgtcccgtgtttctgtagttgctaagtaaaaaaagagctt	Protospacer
*******************************************************

4. spacer 2.1|157202|55|NC_023063|CRISPRCasFinder matches to position: 1007774-1007828, mismatch: 1, identity: 0.982

tttagtttaataatgtgtcccgtgtttctgtagttgctaagtaaaaaaagagctt	CRISPR spacer
tttaatttaataatgtgtcccgtgtttctgtagttgctaagtaaaaaaagagctt	Protospacer
****.**************************************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage