CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NC_023076	Pseudomonas monteilii SB3101, complete genome	2 crisprs	cas3,WYL,csa3,DEDDh,DinG,PD-DExK	0	0	9	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NC_023076_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_023076_1

1820090-1820188

Orphan

Consensus_repeat	Method
GTAGGAGCGGGCTTGCCCGCGAAAGGGCT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_023076_1

>merge|NC_023076|1|1820090-1820188|CRISPRCasFinder
GTAGGAGCGGGCTTGCCCGCGAAAGGGCTCCCACAGGGACCGCCCAAGACTTGAAGCCTGTGCGGTCAAGGTAGGAGCGGGCTTGCCCGCGAAAGGGCT

>NC_023076|1|1|1820090-1820188|CRISPRCasFinder
GTAGGAGCGGGCTTGCCCGCGAAAGGGCT	CCCACAGGGACCGCCCAAGACTTGAAGCCTGTGCGGTCAAG
GTAGGAGCGGGCTTGCCCGCGAAAGGGCT

Protein	Signature genes	Signature genes Name	Protein_function
NC_023076.1\|WP_024086773.1\|1821873_1823781_+\|sugar-phosphate-isomerase/epimerase-and-4-hydroxyphenylpyruvate-domain-containing-protein	unknown	unknown	gnl\|CDD\|225726
NC_023076.1\|WP_024086778.1\|1831921_1842679_+\|heme-peroxidase	unknown	unknown	gnl\|CDD\|188653
NC_023076.1\|WP_024086769.1\|1811473_1812250_+\|trans-aconitate-2-methyltransferase	unknown	unknown	gnl\|CDD\|234970
NC_023076.1\|WP_024086770.1\|1812239_1812611_-\|DUF2784-domain-containing-protein	unknown	unknown	gnl\|CDD\|378502
NC_023076.1\|WP_024086774.1\|1823858_1824527_-\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|372616
NC_023076.1\|WP_013972050.1\|1809934_1811344_+\|amino-acid-permease	unknown	unknown	gnl\|CDD\|273797
NC_023076.1\|WP_023661945.1\|1807677_1808010_+\|EF-hand-domain-containing-protein	unknown	unknown	gnl\|CDD\|372618
NC_023076.1\|WP_023661575.1\|1818592_1820005_+\|amino-acid-decarboxylase	unknown	unknown	gnl\|CDD\|215475
NC_023076.1\|WP_013972058.1\|1820209_1821583_-\|MHS-family-MFS-transporter	unknown	unknown	gnl\|CDD\|340927
NC_023076.1\|WP_023661576.1\|1817466_1818411_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176109
NC_023076.1\|WP_038408539.1\|1842895_1843843_-\|IS110-family-transposase	unknown	unknown	gnl\|CDD\|376564
NC_023076.1\|WP_024086771.1\|1815213_1816605_+\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|274522
NC_023076.1\|WP_024086776.1\|1825933_1826797_-\|sensor-domain-containing-diguanylate-cyclase	unknown	unknown	gnl\|CDD\|143635
NC_023076.1\|WP_023663258.1\|1826963_1828292_-\|TolC-family-outer-membrane-protein	unknown	unknown	gnl\|CDD\|273829
NC_023076.1\|WP_023663259.1\|1828293_1829634_-\|HlyD-family-type-I-secretion-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|130902
NC_023076.1\|WP_024086775.1\|1824554_1825916_-\|chromate-efflux-transporter	unknown	unknown	gnl\|CDD\|273350
NC_023076.1\|WP_024086777.1\|1829640_1831377_-\|type-I-secretion-system-permease/ATPase	unknown	unknown	gnl\|CDD\|226969
NC_023076.1\|WP_015269943.1\|1808187_1809612_-\|PLP-dependent-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|224089
NC_023076.1\|WP_024086772.1\|1816702_1817413_+\|YebC/PmpR-family-DNA-binding-transcriptional-regulator	unknown	unknown	gnl\|CDD\|237084
NC_023076.1\|WP_013972053.1\|1812767_1813637_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|132382

Protein	Function_ID	Function_description	E-value
NC_023076.1\|WP_024086773.1\|1821873_1823781_+\|sugar-phosphate-isomerase/epimerase-and-4-hydroxyphenylpyruvate-domain-containing-protein	gnl\|CDD\|225726	COG3185, COG3185, 4-hydroxyphenylpyruvate dioxygenase and related hemolysins [Amino acid transport and metabolism / General function prediction only].	5.23459e-142
NC_023076.1\|WP_024086778.1\|1831921_1842679_+\|heme-peroxidase	gnl\|CDD\|188653	cd09821, An_peroxidase_bacterial_2, Uncharacterized bacterial family of heme peroxidases. Animal heme peroxidases are diverse family of enzymes which are not restricted to metazoans; members are also found in fungi, and plants, and in bacteria - like this family of uncharacterized proteins.	0
NC_023076.1\|WP_024086769.1\|1811473_1812250_+\|trans-aconitate-2-methyltransferase	gnl\|CDD\|234970	PRK01683, PRK01683, trans-aconitate 2-methyltransferase; Provisional.	1.27508e-121
NC_023076.1\|WP_024086770.1\|1812239_1812611_-\|DUF2784-domain-containing-protein	gnl\|CDD\|378502	pfam10861, DUF2784, Protein of Unknown function (DUF2784). This is a family of uncharacterized protein. The function is not known however it is conserved in Bacteria.	1.116e-35
NC_023076.1\|WP_024086774.1\|1823858_1824527_-\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|372616	pfam13489, Methyltransf_23, Methyltransferase domain. This family appears to be a methyltransferase domain.	1.99644e-12
NC_023076.1\|WP_013972050.1\|1809934_1811344_+\|amino-acid-permease	gnl\|CDD\|273797	TIGR01773, GABA_permease, gamma-aminobutyrate permease. GABA permease (gabP) catalyzes the translocation of 4-aminobutyrate (GABA) across the plasma membrane, with homologues expressed in Gram-negative and Gram-positive organisms. This permease is a highly hydrophobic transmembrane protein consisting of 12 transmembrane domains with hydrophilic N- and C-terminal ends. Induced by nitrogen-limited culture conditions in both Escherichia coli and Bacillus subtilis, gabP is an energy dependent transport system stimulated by membrane potential and has been observed adjacent and distant from other GABA degradation proteins. GabP is highly homologous to amino acid permeases from B. subtilis, E. coli, as well as to other members of the amino acid permease family (pfam00324). A member of the APC (amine-polyamine-choline) transporter superfamily, GABA permease possesses a "consensus amphiphatic region" (CAR) found to be evolutionarily conserved within this transport family. This amphiphatic region is located between helix 8 and cytoplasmic loop 8-9, forming a potential channel domain and suggested to play a significant role in ligand recognition and translocation. Unique to GABA permeases, a conserved cysteine residue (CYS-300, E.coli) located at the beginning of the amphiphatic domain, has been determined to be critical for catalytic specificity. [Transport and binding proteins, Amino acids, peptides and amines].	0
NC_023076.1\|WP_023661945.1\|1807677_1808010_+\|EF-hand-domain-containing-protein	gnl\|CDD\|372618	pfam13499, EF-hand_7, EF-hand domain pair.	0.000852009
NC_023076.1\|WP_023661575.1\|1818592_1820005_+\|amino-acid-decarboxylase	gnl\|CDD\|215475	PLN02880, PLN02880, tyrosine decarboxylase.	2.67252e-142
NC_023076.1\|WP_013972058.1\|1820209_1821583_-\|MHS-family-MFS-transporter	gnl\|CDD\|340927	cd17369, MFS_ShiA_like, Shikimate transporter and similar proteins of the Major Facilitator Superfamily. This subfamily is composed of Escherichia coli shikimate transporter (ShiA), inner membrane metabolite transport protein YhjE, and other putative metabolite transporters. ShiA is involved in the uptake of shikimate, an aromatic compound involved in siderophore biosynthesis. It has been suggested that YhjE may mediate the uptake of osmoprotectants. The ShiA-like subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	7.1829e-153
NC_023076.1\|WP_023661576.1\|1817466_1818411_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|176109	cd08417, PBP2_Nitroaromatics_like, The C-terminal substrate binding domain of LysR-type transcriptional regulators that involved in the catabolism of nitroaromatic/naphthalene compounds and that of related regulators; contains the type 2 periplasmic binding fold. This CD includes the C-terminal substrate binding domain of LysR-type transcriptional regulators involved in the catabolism of dinitrotoluene and similar compounds, such as DntR, NahR, and LinR. The transcription of the genes encoding enzymes involved in such degradation is regulated and expression of these enzymes is enhanced by inducers, which are either an intermediate in the metabolic pathway or compounds to be degraded. Also included are related LysR-type regulators clustered together in phylogenetic trees, including NodD, ToxR, LeuO, SyrM, TdcA, and PnbR. This substrate-binding domain shows significant homology to the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.36132e-58
NC_023076.1\|WP_038408539.1\|1842895_1843843_-\|IS110-family-transposase	gnl\|CDD\|376564	pfam01548, DEDD_Tnp_IS110, Transposase. Transposase proteins are necessary for efficient DNA transposition. This family includes an amino-terminal region of the pilin gene inverting protein (PIVML) and of members of the IS111A/IS1328/IS1533 family of transposases. The C-terminus is represented by family pfam02371.	3.53128e-22
NC_023076.1\|WP_024086771.1\|1815213_1816605_+\|FAD-dependent-oxidoreductase	gnl\|CDD\|274522	TIGR03329, Phn_aa_oxid, putative aminophosphonate oxidoreductase. This clade of sequences are members of the pfam01266 family of FAD-dependent oxidoreductases. Characterized proteins within this family include glycerol-3-phosphate dehydrogenase (1.1.99.5), sarcosine oxidase beta subunit (1.5.3.1) and a number of deaminating amino acid oxidases (1.4.-.-). These genes have been consistently observed in a genomic context including genes for the import and catabolism of 2-aminoethylphosphonate (AEP). If the substrate of this oxidoreductase is AEP itself, then it is probably acting in the manner of a deaminating oxidase, resulting in the same product (phosphonoacetaldehyde) as the transaminase PhnW (TIGR02326), but releasing ammonia instead of coupling to pyruvate:alanine. Alternatively, it is reasonable to suppose that the various ABC cassette transporters which are also associated with these loci allow the import of phosphonates closely related to AEP which may not be substrates for PhnW.	0
NC_023076.1\|WP_024086776.1\|1825933_1826797_-\|sensor-domain-containing-diguanylate-cyclase	gnl\|CDD\|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	7.67238e-54
NC_023076.1\|WP_023663258.1\|1826963_1828292_-\|TolC-family-outer-membrane-protein	gnl\|CDD\|273829	TIGR01844, Proteases_secretion_protein_PrtF, type I secretion outer membrane protein, TolC family. Members of this model are outer membrane proteins from the TolC subfamily within the RND (Resistance-Nodulation-cell Division) efflux systems. These proteins, unlike the NodT subfamily, appear not to be lipoproteins. All are believed to participate in type I protein secretion, an ABC transporter system for protein secretion without cleavage of a signal sequence, although they may, like TolC, participate also in the efflux of smaller molecules as well. This family includes the well-documented examples TolC (E. coli), PrtF (Erwinia), and AprF (Pseudomonas aeruginosa). [Protein fate, Protein and peptide secretion and trafficking, Transport and binding proteins, Porins].	3.20301e-80
NC_023076.1\|WP_023663259.1\|1828293_1829634_-\|HlyD-family-type-I-secretion-periplasmic-adaptor-subunit	gnl\|CDD\|130902	TIGR01843, Hemolysin_secretion_protein_D_plasmid, type I secretion membrane fusion protein, HlyD family. Type I secretion is an ABC transport process that exports proteins, without cleavage of any signal sequence, from the cytosol to extracellular medium across both inner and outer membranes. The secretion signal is found in the C-terminus of the transported protein. This model represents the adaptor protein between the ATP-binding cassette (ABC) protein of the inner membrane and the outer membrane protein, and is called the membrane fusion protein. This model selects a subfamily closely related to HlyD; it is defined narrowly and excludes, for example, colicin V secretion protein CvaA and multidrug efflux proteins. [Protein fate, Protein and peptide secretion and trafficking].	3.42905e-114
NC_023076.1\|WP_024086775.1\|1824554_1825916_-\|chromate-efflux-transporter	gnl\|CDD\|273350	TIGR00937, Chromate_transport_protein, chromate transporter, chromate ion transporter (CHR) family. Members of this family probably act as chromate transporters, and are found in Pseudomonas aeruginosa, Alcaligenes eutrophus, Vibrio cholerae, Bacillus subtilis, Ochrobactrum tritici, cyanobacteria and archaea. The protein reduces chromate accumulation and is essential for chromate resistance. [Transport and binding proteins, Anions].	1.28419e-58
NC_023076.1\|WP_024086777.1\|1829640_1831377_-\|type-I-secretion-system-permease/ATPase	gnl\|CDD\|226969	COG4618, ArpD, ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only].	0
NC_023076.1\|WP_015269943.1\|1808187_1809612_-\|PLP-dependent-aminotransferase-family-protein	gnl\|CDD\|224089	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism].	5.64316e-111
NC_023076.1\|WP_024086772.1\|1816702_1817413_+\|YebC/PmpR-family-DNA-binding-transcriptional-regulator	gnl\|CDD\|237084	PRK12378, PRK12378, YebC/PmpR family DNA-binding transcriptional regulator.	3.54959e-108
NC_023076.1\|WP_013972053.1\|1812767_1813637_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|132382	TIGR03339, phn_lysR, aminoethylphosphonate catabolism associated LysR family transcriptional regulator. This group of sequences represents a number of related clades with numerous examples of members adjacent to operons for the degradation of 2-aminoethylphosphonate (AEP) in Pseudomonas, Ralstonia, Bordetella and Burkholderia species. These are transcriptional regulators of the LysR family which contain a helix-turn-helix (HTH) domain (pfam00126) and a periplasmic substrate-binding protein-like domain (pfam03466). [Regulatory functions, DNA interactions].	1.27012e-133

>NC_023076.1|WP_023661575.1|1818592_1820005_+|amino-acid-decarboxylase
MTPEQFRQYGHQLIDLIADYRQSVGERPVMAQVEPGYLKAALPAQAPRQGEPFAAILDDVNQLVMPGLSHWQHPDFYGYFPSNGTLSSVLGDFLSTGLGVLGLSWQSSPALSELEETTLDWLRQLLGLSGQWSGVIQDTASTSTLVALICARERASDYALVRGGLQAQAKPLIVYVSAHAHSSVDKAALLAGFGRDNIRLIPTDERYALRPEALQVAIEQDLAAGNQPCAVVATTGTTATTALDPLRPIGEIAQAHGLWLHVDSAMAGSAMILPECRWMWDGIELADSLVVNAHKWLGVAFDCSIYYVRDPQHLIRVMSTNPSYLQSAVDGEVKNLRDWGIPLGRRFRALKLWFMLRSEGVEALQARLRRDLDNAQWLAGQIGAAAEWEVLAPVQLQTLCIRHRPAGLEGEALDAHTKGWAERLNASGDAYVTPATLDGRWMVRVSIGALPTEREHVEQLWARLQEVVKG
>NC_023076.1|WP_023661576.1|1817466_1818411_+|LysR-family-transcriptional-regulator
MNPAFASLSLAHLRTLDHLLQLKNLSHAAERLGVSQSALSRQLAHLREAFDDPLLVRQGRGYVLSEHAEALVEPLRQVLEELHALRQPAVFDPGRCERRFCLAASDYVAEHMLPLLVAALEREAPGVSLEYRTWQAGQYALLASGEIDLATTLFDESPPNLHGRLLGEDRAVCLMRNDHPLAAHGALSQADYLGHKHVRISGGGDKDSFIDRHLRAQGLQRRVSLEVPFFSATVQVIANSQALATVPEHIARQLCRLHDLAWRPLGFIDHSQRYWVVWHQRLQASAEHRWLRNRVFELWRQSQFGVQGGHAGLP
>NC_023076.1|WP_024086772.1|1816702_1817413_+|YebC/PmpR-family-DNA-binding-transcriptional-regulator
MGAQWKAKHKEAAANAKGKIMGKLSKEIQIAAKSGADPDMNPRLRLAIEQAKKASMTRETLERAIRKGAGLDGDAVQYSAVSYEGFAPHQVPLIVECLTDNVNRTVAQIRVLFRKGQLGASGSVAWDFNHVGLIEATPNGDADPEMAAIEAGAQDFEEGDEEGSTLFITDTTDLDAVQKALPEHGFTVTSAKIGYTPKNPVSAATLSAEALAEVEAFLEAIDENDDVQNVYVGLTD
>NC_023076.1|WP_024086771.1|1815213_1816605_+|FAD-dependent-oxidoreductase
MRPFWLQQALDSAQEAVCPPLQGDARCDVCIVGGGYTGLWTALMLKEAVPALDIVLIEADICGAGASGRNGGCALSWSAKYFTLERLFGVAEAVRLVRESERSIGEIGAFCAANGIDCDYRLDGTLYTATNAAQVGATDAVIAALEQKGINSFRRLPLQQLQRLAGSARHLEGWFSPAAATVQPGKLVRGLRRVALQRGVRIHEGTAMTGLEHGAPVQVRTAHGTVRADRVVLGLNAWMARAFPQFERSVAIVSSDMVITEPCPELLHQIGLDSGISVLDSRIFVHYYHNTSDGRLMLGKGGNTFAYGGRMLPVFDQPSPYRPLLRESLGGFFPALAQVPLAASWNGPSDRSVTGLPFFGRLNGQGNVFYGFGYSGSGVGPCHMGGQILSSLALGLDNPWTRSPLVKGPLGLFPPEPIRYLGSLMVRNAIRRKERAEDRGQRPRRLDVRLARFAAAAGKADKG
>NC_023076.1|WP_013972053.1|1812767_1813637_-|LysR-family-transcriptional-regulator
MSVSHAQLKAFHAVAVHGSFTRAAEKLFLTQPAVSDQVRKLEERFGVLLFHRNKRSVQLTDLGERLLGISQRLFACEAEAHELLQDSRALHTGSLVLAVDAPVHVLPQIARFCQRYPGIQVKIETGNTDESLARLFSYQADLALLGRDVDDERLHCLPLRRDPMVAFVSHQHPWASRGAISLADLDDTPLVLREPGSVTRQTLEEEMQRAGLRIRPAIQVEGREAAREAVVVGIGVGVVSAAEFGADARVCALPIVDCQRHLTETLVCLSEQRTRRVVATFLQMVEEGL
>NC_023076.1|WP_024086770.1|1812239_1812611_-|DUF2784-domain-containing-protein
MLYRLAADTLVLLHLLFILLVLFGGLLVLRWRPALLLHLPAMAWGLAVECLHLGCPLTTWENRMRSAAGDAGYQGGFVEHYIWPLIYPAGLTPHIQLLLGTFVLLLNLGIYSYVAWRWRRPSG
>NC_023076.1|WP_024086769.1|1811473_1812250_+|trans-aconitate-2-methyltransferase
MAWSATQYSQFEDERTRAVRDLLAAVPPRPVRHATDLGCGPGNSTEVLLQRYPDAQVTALDSDPDMIDKARERKRLCIPRVRTVIADIAGWTAPEPQDLILANASLQWVPDHASLYPHLVRQLSEGASLAVQTPDNLDEPAHRQLREIASQGPWAAKFADFQLPPRHNAAFYYDLLSPLCARVDVWRTTYHHPLAGGAEAVVEWFKGSALRPYLGRLEEQEQADFLQMYLQAMQRDYPPATDGKVLLPFPRLFVIATR
>NC_023076.1|WP_013972050.1|1809934_1811344_+|amino-acid-permease
MDATSTTTTAKSGHESKLSASLKSRHLTMMSIAGVIGGALFVGSGSVIHSAGPAAVLAYLAGGILVVLIMRMLGEMATSSPDTGSFSTYADRAIGRWAGFTIGWLYWWYWVILMAWEAYVAGKILHGFFPDVSVNVFVLATTLLLITVNFFNVKHYGEFEFWFALIKVIAIVCFLIVCTAAVLNIWQFGEVRGISHLTAEGFMPNGITTVIGALLGVMFAFLGAEIVTIAASEAKDPAAQIVKATNSVVWRVCLFYVGSIFLIVCLVPWNDPHLGVSGYGAYRRTLELLGVPYAELLMNFVVLTSVSSCLISGHYTASRMLFSLAQRGDAPSFFKITRAGTGVPVYAIMGSCAVAVVCALINFSETLRPKDVLETLMNTTGMIALLVYLVIAFSQLRMRRKLVAEGKEVRLKMWLFPWLTYLVIAFIVAALVTMAFMPDYQILVISTGIAAAIVVAMGVVHQIRTGKQH
>NC_023076.1|WP_015269943.1|1808187_1809612_-|PLP-dependent-aminotransferase-family-protein
MFELHPDSSTPLVNQIIDGLRELIDNQTLKPGAKVPSIRAFAASYSVSTFTVVEAYDRLVAQGLLVSRGNAGFFVNRAAGELLDPHNAEADTSRPTFNSEWYLQQIFEIRQLPFKPGCGWLPNDWMYEDGLRRGLRQVAGSPLELSGYGDPMGLMELRALTAQNLQQELSIVANPAQLMLTHGASQALDLAARTLVRPGDVVLVDDPGYPNLMSILRTQGATLVGVPRTPAGYDLNQLEQLLTHHRPTAFFTQPHLHSPTCSRTPLPQLHRLLQLASQHGFRLVENNLYADMVAEPQPCLASLDHLQQVVYVGSYSKSISPNVRVGYMLANPELMQKLLHLKMRSGLTTSQVMERVVYAAIIDGRWRKHLKRLRQRLAEAHQEVGRHLHRLGFELFIESDEGMYIWTRHPAIPDSAALLDDALEKGIMLGPGQLFMVDAKATGWMRFNVAFSTEPAMWELLEKVLVKHVRRGGV
>NC_023076.1|WP_023661945.1|1807677_1808010_+|EF-hand-domain-containing-protein
MGSVKVANTNLLDLPILLDYAEVDSNLDGKVSYAEVSRYFNGQLERLHFERAYLDEQHRLLEEKLKQVAQKFTYLQKKCLAFNDTNRDGYISFDEFKAALSKIPVAVELE
>NC_023076.1|WP_013972058.1|1820209_1821583_-|MHS-family-MFS-transporter
MAHSSSQAKKATASGWIGSALEYYDFFIYAQAAALIFPQIFFPNTDPKMAIIASLATYGVGYLARPVGAFVLGHWGDTRGRKNVLLLCMFLMGLSTMAVGLLPTYHDIGLLAPALLVVLRLVQGFAVAGEISGASSMIMEHAPFGRRGYYASFTLQGVQAGQVLAAAVFLPLAYFMPSEAFNDWGWRIPFLLSAFVLIAGFIIRKEVHETPAFVKEEKQDKVAKSPISEAFRHSWKHMVLVMFMALMNVIPVVATIFGAAYAVQPAYGIGFDKSVYLWIPVVGNIVAVLVIPFVGNLSDKIGRRPTMIAGCLGSGLLAFVYLYAISIQNVPLAFASSIVMWGMVYQGYNAVFPSFYPELFHTRYRVSAMAIAQNIGTMLTAMLPALFALVAPPGSDNIPLVVGSLAFFITCVCALAAYIAPETHRLAMEDLGNPDAKPMDKTAYEASRKGSFQAVSN
>NC_023076.1|WP_024086773.1|1821873_1823781_+|sugar-phosphate-isomerase/epimerase-and-4-hydroxyphenylpyruvate-domain-containing-protein
MQRSIATVSLSGTLPEKLEAIAAAGFDGVEIFENDLLYYAGSPRQVRQMCADLGIAITLFQPFRDFEGCRRDRLQKNLDRAERKFDMMQELGTDLVLVCSNVQADALGEEQLLVDDLRLLAEHAGKRGLRIGYEALAWGRHVNTYQQVWNLVRQADHPALGVILDSFHTLSLKGDPSAIRDIPGDKIFFVQMADAPILAMDVLEWSRHFRCFPGQGEMDMAGFLAPILATGYRGPLSLEIFNDGFRAAPPRQNAADGLRSLLYLEEHTRLRLEQEGTSIEPGVLFTPPAASAYGGVEFLEFAVDEAVGARLGSWLKRLGFADAGKHRSKEVQLLRQGDINIVLNAEPYSFGHNFFEAHGPSLCATALRVKDQQAALKRATAFRGQPFRGLVGPNECEVPAVRAPDGSLLYLVEQGTAGQTLYDTDFSLDKNATATGGLRRIDHMALALPAESLDSWVLFYKSLFDFEADDEVVLPDPYGLVKSRALRSQCGTLRLPLNISENRNTAIAHALSSYRGSGVHHIAFDCDDIFREVARAKLAGVPLLEIPLNYYDDLAARFDFDDEFLSELAYYNVLYDRDAQGGELFHVYTEPFEERFFFEIIQRKGGYAGYGAANVAVRLAAMAKARSGAARKPVL
>NC_023076.1|WP_024086774.1|1823858_1824527_-|class-I-SAM-dependent-methyltransferase
MRNPEDALLDSWQHNAQAWIDAVRSGSIESRRQVTDQAILLAILGRQPERVLDLGCGEGWLLRALGDRGVEAVGVDGDRALVDAARAAGSAEVHLASYAQLAAGQAYVGKDYDLICANFALLQQDIIPLLVAMNALLAPGGALVIQTLHPWSVADGDYQDGWREESFAGFGGDWQVMPWYFRTLASWLNALDMAGLRLVSLQEPQHPQSALPQSLLLVAERP
>NC_023076.1|WP_024086775.1|1824554_1825916_-|chromate-efflux-transporter
MTEHLQGAAEQTRGHISRIEALLFWLKLGFISFGGPAGQIAIMHQELVERRRWISERRFLHALNYCMLLPGPEAQQLATYIGWLMHRTWGGVIAGTLFVLPSLFILIGLSWVYLAWGEVPVVAGIFYGIKPAVTAIVVHAAHRIGTRALKNGWLWAIAAASFVAIFALDVPFPLIVLAAALLGHIGGRLLPGQFAPGGGHGATRASHGPAVIDDDTPAPEHARFSWGRLLGLLLVGAALWLLPMGVLMATFGWQGTLTQMGWFFTKAALLTFGGAYAVLPYVYQGAVGHYGWLSPTQMIDGLALGETTPGPLIMVVAFVGFVGGYLHPMFGTDQAFMAGAVAASLVTWFTFLPSFLFILAGGPLVESTHNELKFTAPLTGITAAVVGVILNLALFFGYHVLWPAGFDGRFDWPSALIALAAAVALFRYKRGVIQVLIACALAGLATHLLTGAQ
>NC_023076.1|WP_024086776.1|1825933_1826797_-|sensor-domain-containing-diguanylate-cyclase
MPVDLQALYPRLIHLMLDTVFVVDRGNQIIFVSDACEALLGYQACELIGTPITDYMHPDDLAITRASIVRVMSGQPHYDFRNRYIRKDGSIVHILWSASWSDEANARIGVARDITAQHQAEEELRFLAHHDPLTRLANRAMFNERLGTALVAARHHNHPLALLFIDINDFKDINDNHGHSVGDRVLCILARRLEGCVGATDTVARMGGDEFTVLLTDYASPKAIAEQVARILAAMAEPLGAEFAGIGAPSCSIGVARFPEDGNDADMLLRHADGDMYRIKRQRAAAS
>NC_023076.1|WP_023663258.1|1826963_1828292_-|TolC-family-outer-membrane-protein
MNRPCLMLCLLGLSVQASAMDLKQAWDLLQYQGPIYRAAVHEKEAGSENRAIGQAGLLPQINAVGYFNKVNGSQRQSGRDNDLDYDSKGANVRLRQPLFNKQKMAEYHQGQQRADYSVAVFDAKTQDAAVRLADAYFDVLLASETITLAKAKLNAFEEQLASAKRRMELGAGTITDIDESIARRDLAEADLIEAQDNLVNARRKLEEYIGETPESLTTLQPGFNTPPLMPGNLQDWLVKAQADSPLIHARRHNYELAEEEVKRARAGHWPTLDFVAGYTAGSSQSISELNQRNHYSSIGLELNIPLYSGGSTSALTRQASANSSKALDELDATRQEVISDTTREYRGVQSGALRIQALEKAVASNERSLLSARKGFREGGTSTNSDVLNAEELLFDARHDLFEAKLNYLMSRLRLASSVGSLGDDDIQQINDYLGPELVVSN
>NC_023076.1|WP_023663259.1|1828293_1829634_-|HlyD-family-type-I-secretion-periplasmic-adaptor-subunit
MQMTQHTELIPAEARNEIDLDIHRPARWGVWLVAAGFGGFLLWSGLAPLDAGVVATGTVKVSSNRKAVQHLTGGTVEAILVREGDVVKKGQEVVRLDALRAVAEQGAVSAQYIVSKTVENRLEAERDGRDQVTFDPALLKHYGGDPRLLAAMDLQQRLLDTRRAGLAGELSILEENLAATAVQLKGLQQVYGARASQIGFLNQELQGTRVLAAEGYVPRNRLLELERNNADLSAGQAENLNNIARARSQATEIKLRILQRQHDYLKEVESQLTDTAKENTTLADRLRALDYEVTHTVIRSPIDGMVQALSIATVGGIIQPGAKIMEVVPLDQPLQVDAMIPVQAIDKMVPGLDVDLAFPAFNHAKTPNIPGRVKTISADRLMDEESKQPYYLAQVEVTQDGMALLGSNHIRPGMPATVTIKTGERNLLSYLLKPMLERVDASFKEQ
>NC_023076.1|WP_024086777.1|1829640_1831377_-|type-I-secretion-system-permease/ATPase
MHKPPRTRSELADVLFRLRRSFFALAAFSGVINVMMLTPAIYMLQVYDRALVSRNVTTLTMLTLLVIGLFMLMSALEMVRTRVLIRVGNFLDMDLNRRIFSAAFERNLSRAGGNPAQALQDLTQVRQFLTGNGLFAFFDAPWTPIYLLVCYLIHPLLGLVTLIGSLILVGLAYLTEKATQKPLAEANQAALSSASYANNNLRNAEVIEAMGMLPAIGKRWFQGHLRILQMQTLASDRAAIISSTGRFVRITLQSVILGAGALLAIEGKITPGMMIACSILTGRALAPVEQVIAAWKQLQGSRSAWGRLNDLLHDYPQRPPSMSLQRPMGMLAVENVVAGAPGTSNSIVRGVSFSLVPGESLGIIGPSASGKSTLARLLVGVWPTQAGKVRLDGADIFTWNKAELGPWLGYLPQDVELFEGTIAENIARFAEVDSEAVIRAARSSGVHDMILRFPQGYDTRLAADGSPLSGGQKQRIALARALYGEPNLVVLDEPNANLDDVGEKALVDALAELKARGATVILISHRPNVLCAVDKVLMLRDGAVHMLGSRDEVFAALRKASVIPTATAAPLASVKVRE
>NC_023076.1|WP_024086778.1|1831921_1842679_+|heme-peroxidase
MADFSKSDLEFILQQIFIAEAHADGASLIDLLPNSQVPFGLRTVDGSYNNLVTGQSEFGAADNSFLRLLSPSFTGDYAGTGTVIDSQPRTISNLIVDQTANNPAAVEANGGAAPVISPGIDGVFGTADDTEVFFIPNVSPDVGLTAGFNAWMTFFGQFFDHGLDLVTKSSTDVVFIPLQPDDPLYVEGSPTNFMVLPRAVRTAGADGVVGTADDGQTNTTSPFVDQSQTYSSHPSHQVFLREYTLNAAGDPVATGRLITNRDLGADGRFGTADDGNGESGGMATWAVVKAQARDLLGINLTDADVHSVPLLATDPYGNFLRGPNGMPQVVMRVNNGADGIAGTADDVTTLVEGNRDAPISLANAVSTGHGFLDDIAHNAAPVIVNGVLQADADIAVGNAQPTGPGGNNLTYDNELLDAHYIAGDGRVNENIGLTAVHHVFHSEHNRLVQQTKDTLLAAGDLAFLNQWLIDDVAAIPTTPAEIAALVWDGERLFQAAKFGTEMQYQHLVFEEFARTIQPQIDEFLAPNGYDTSIDPAILAEFAHVVYRFGHSMLTETVDRYDPTFATVNDDPQLGLIAAFLNPLAFAGSGATADEAAGAIIRGVTRQLGNEIDEFVTEALRNNLLGLPLDLPALNIARGRDTGIPTLNEARREFYAMTGDSQLKPYISWADFADHLKHPASLINFIAAYGTHATITGADTEAAKRAAAVALVLGGDGAPADRLDFLNGTGAYANVTLAGADGIAGTADDITGVTVTGVDAIDFWVGGLAEKKMPFGGMLGSSFNFVFETQLEALQNGDRFYYLSRTAGMNFGTELENNSFAKLIMLNSDVTHLSNTVFLTPTFTLEVDQTKQFTGLGADGRADPTGGIMINGVEVVSQVIRDNPDTVGTDTNFLHYTGKDHVVLGGTAGNDIIISSEGDDTLYGDAGNDTLEGGAGNDAVLGGAGDDIITDSFGDNRLEGNDGNDVIVAGSMLAAGNLILGGNGQDFIITTEDISTTFGGQGDDFILGAKTNLPPTGNEGDDWIEKGTQDGAPGDNFAPLLGDEVVGNDIFVGGGGFDEMIGEGGDDIFVGSDAQDKMDGMSGFDWVTNKNDQVGVTVDLTLAALAQPHGNAPNQNTGIFNPVGASPASILDRFAEVEGVSGSNFADVLKGDNVDAVTILNHGGATGSALTNVALIRGLQQFLADAGLPTTGFATGNIMLGGNGSDLIEGRGGDDLIDGDKWLNVRIAVYAPGDVNHTGPEIASFDSMVDMIPFMLDRTYNPGQLKAVREILPGTSTGGAAFDTAVFSGVQSEYTVTQNTKGTLDTSDDVWTVTDNVAGRDGVDTLLHIERLQFADSQRVLVEGLNAQPVGSPTVTDNNGGAITVGDLLTVNVAGVRDADNISAGNPLGTLADRSVSYYWQFEATPGSGVFEDIILLPAGDLAFQSADGTTFKVSPDLAGLSLRVKAIYQDAHGTTEVLFSQPTTVVQPGAPVVPTPATPVVDATAGGAGLHMARSDLNFILEQIKIAEADANGADILSLLPNIRAPLGLRAVDGSNNNLMNLNGINNTEFGAADNVFPRVTDPVFNPAEGAPAGFFGPGSPAIPGSSYEQTSGPVFDSQPRTISNLIVDQTSNNPAAYATAYDPGADGVLNFGVEGNDDVLKDGVRIVASPGLDGQFGTDDDHDVYLFENTAADAGLSAPFNAWMTFFGQFFDHGLDLVTKGGSGTIYIPLQPDDPLYVEGGFTNFMVVTRATNQPGPDGVLGTADDIHEHTNTTSPFVDQNQTYSSHPSHQVFLRGYVLTDDGPIATGRLITNRDLGADGRYGTADDTEIGGMATWKVVKAQARDVLGINLTDADVDNVPLLATDAYGNFIKGPNGFPMVIMKGADGIAGTADDQQVEGNPLAPIDLTNAVRTGHQFLADIAHNAVPVFSNGALVPDADTDVGNAVPVNPQTGANLAYDNELLDAHYIAGDGRVNENIGLTAVHAIFHSEHNRLVAQTMDTVLDSGDLAFINEWLLNPVSALPANQAEIDALVWNGERLFQAAKFGTEMQYQHLVFEEFARTVQPRVDLFFAPTQVYDVDLDASIVAEFAHTVYRFGHSMLTETVDRFDVDFTVISDPASANPDQQLGLIAAFLNPLAYAASGVTPEDATSAIVRGVTRQAGNEIDEFVTEALRNNLLGLPLDLPAINIARGRDVGIPSLNAVRRDIYAQTGDTQLKPYTSWVDLVQHLKHPESLINFIAAYGTHSTITGATTLLEKRAAAMALVFGGDGAPADRLEFLNSTGAYANVTLPGKDGVLGTVDDLRAVTVTGVDAIDLWIGGLAEAKTPFGGMLGSTFNFVFENQMEKLQDGDRFYYLERTAGLSMNAELESNSFAKLIMANTSATHLPGLVFSDVGFYLEVDQSKQFNEGLGNADPLGENGEQVVFRDSPLTVGPDTNYIRYAGDQHIVLGGTNGDDILVSSEGDDTVWGDGGNDRIEGGDGNDQLRGGAGDDIISDMGGDDNIQGGDGNDVLHGGNGVNLIIGGFGNDFIVTGEDASEAIGGQGNDFILGSKANEQDMGNEGDDWIEKGTSDGAPGDNFDPLGNDPVIGNDVFIGGNENDKFNGEGGDDIMVGSLGFGDRYIGGSGYDWATFKGLAQGVTVDFSDRFFNVPPVPGSGASALVRFDIMEGLSGSAHGDFLRGDSETSATLPTNGANGSVLTNISLINGLSSLLAAGATFYDGGNIILGGSGSDLIEGRGGDDILDGDKWLNVRISVRANSDGTGPEIASFDSMEPMVPLMLNGTYNPGQLVIVREILNGTDSYDTAVYSGVASDYSVVVDGNSVIVTDSVAGRDGVDRLTGIERLQFSDSSQASGVGTAVNAGPTGSLVILDAATGVRDDTPVSGQLLRVTPLAVHDADNVSATNLTGAITGPVAYYWQVETLPGSGVYEDITFVAAGEVSRAVGTTYRVTDDVAGLNIRVRAVYQDTKGTLEIVDSAPNNAPTAGPTVTGLLVQNQTLTANPATIVDADGLSNPRFTFQWQSNRGTGWVDIAGAINSTFLLTQNQVGQNMRVVVSYVDDFGVQESIASDILDPVANVNDAPTGAVLISDTTPDQGQTLTALTGSIADLDGLGAFSFQWQQNIGGTFSNIAGATAATFTPGFEQGNRQLRVVVSYTDAFGTLESLTSAATAAVVPPAGVVLVGTAGANTLTGGAGNDTLSGLGGNDVLNGLGGADQLFGGDGNDILNGGNDPDSLDGGAGNDTLNGGLGADAMVGGAGNDTFVVDNLGDTVSEALNGGVDLVQTTLASYTLGANVENLTFTGAGNFTGTGNTLANTITGGAGNDLLDGGAGIDRLVGGLGDDTYVVDNAGDVVVEATAGGTDTVRATAASYTLGANVENLTYIGAGNFTGTGNGLANIITGAAGNDTLNGDGGNDQLLGGLGTDTLNGGAGDDTLDGGAGNDSLFGDTGNDNLQGGAGDDNLDGGNGVDVLQGGDGNDTLFGGVGNDTLQGGAGNDFLNGAAGNDTVVGGAGDDTMMASDGNDVFQFAAGFGNDLIINFDAVPQGGQDRLDISALNITAATFAANVTIADVGNDTLVSIGATDSIRLVGVADATTVTVADFNLAG
>NC_023076.1|WP_038408539.1|1842895_1843843_-|IS110-family-transposase
MAMVVADSKRLIGVDVAKAELVIWDDESAELIAIPNTKAAIKKWLKGLSGAMSVAIEATNIYHVLFTDLAFEFGHTIYVVDGYALSHYRKGVNVRAKTDAIDAQLLARYLKNEGQDLTPWAPPPAIYRQLLSLFRRRAGLVQARTSLSQGWANEPLLRAAFKTHLRAMQRLELLVEKMIKGLLEKAGLMPQVKRCMKVEGIGFLTAARLTATFQRGNFSGGDAFIAFLGMDLRIAQSGQKKGQSKLTKRGDPEARRLLHNAAMSACRTAVWKSYYEERLARGFSTTASLVMLARKLARVVFALLKSGDEYRSKAA

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Crispr_ID: NC_023076_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_023076_2

2887688-2887810

Orphan

Consensus_repeat	Method
GGCCTCTTCGCGGGTCAAACCCGCTCCCACAGGT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_023076_2

>merge|NC_023076|2|2887688-2887810|CRISPRCasFinder
GGCCTCTTCGCGGGTCAAACCCGCTCCCACAGGTACTGTACAGTCCTCAAGGGCGTTGGAGACCTGTGGGGAGCATCTACTGCCTGCACTGGCCTCTTCGCGGGTAAACCCGCTCCCACAGGT

>NC_023076|2|2|2887688-2887810|CRISPRCasFinder
GGCCTCTTCGCGGGTCAAACCCGCTCCCACAGGT	ACTGTACAGTCCTCAAGGGCGTTGGAGACCTGTGGGGAGCATCTACTGCCTGCAC
TGGCCTCTTCGCGGGTAAACCCGCTCCCACAGGT

Protein	Signature genes	Signature genes Name	Protein_function
NC_023076.1\|WP_024087209.1\|2875244_2878250_+\|phage-receptor	unknown	unknown	gnl\|CDD\|236624
NC_023076.1\|WP_024087216.1\|2896327_2897641_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372583
NC_023076.1\|WP_024087210.1\|2879228_2880320_+\|GGDEF-domain-containing-protein	unknown	unknown	gnl\|CDD\|143635
NC_023076.1\|WP_015270567.1\|2889698_2890820_-\|quinohemoprotein-amine-dehydrogenase-subunit-beta	unknown	unknown	gnl\|CDD\|211887
NC_023076.1\|WP_024087217.1\|2897779_2899072_-\|phenylethylamine-degradation-protein-PeaF	unknown	unknown	gnl\|CDD\|223717
NC_023076.1\|WP_015270568.1\|2891177_2892608_-\|quinohemoprotein-amine-dehydrogenase-maturation-protein	unknown	unknown	gnl\|CDD\|274848
NC_023076.1\|WP_024087218.1\|2899064_2899742_-\|peptidase-S8	unknown	unknown	gnl\|CDD\|173817
NC_023076.1\|WP_024087215.1\|2892657_2894223_-\|quinohemoprotein-amine-dehydrogenase-subunit-alpha	unknown	unknown	gnl\|CDD\|274849
NC_023076.1\|WP_024087219.1\|2899731_2901465_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224055
NC_023076.1\|WP_024087214.1\|2887886_2889560_-\|AMP-binding-protein	unknown	unknown	gnl\|CDD\|237145
NC_023076.1\|WP_015270558.1\|2870684_2872244_-\|threonine-ammonia-lyase,-biosynthetic	unknown	unknown	gnl\|CDD\|237111
NC_023076.1\|WP_024087212.1\|2883901_2887030_+\|multidrug-efflux-RND-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|273335
NC_023076.1\|WP_004375838.1\|2890852_2891176_-\|quinohemoprotein-amine-dehydrogenase-subunit-gamma	unknown	unknown	gnl\|CDD\|312520
NC_023076.1\|WP_013972837.1\|2878249_2879089_+\|DUF4434-family-protein	unknown	unknown	gnl\|CDD\|182155
NC_023076.1\|WP_003259966.1\|2872425_2872857_-\|PACE-efflux-transporter	unknown	unknown	gnl\|CDD\|226610
NC_023076.1\|WP_013972839.1\|2880436_2881735_-\|two-component-sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|236724
NC_023076.1\|WP_024087213.1\|2887091_2887667_+\|molybdenum-cofactor-guanylyltransferase-MobA	unknown	unknown	gnl\|CDD\|234725
NC_023076.1\|WP_003259958.1\|2881741_2882443_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NC_023076.1\|WP_024087211.1\|2882714_2883890_+\|efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|169982
NC_023076.1\|WP_013972847.1\|2894681_2896175_+\|aldehyde-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|143410

Protein	Function_ID	Function_description	E-value
NC_023076.1\|WP_024087209.1\|2875244_2878250_+\|phage-receptor	gnl\|CDD\|236624	PRK09782, PRK09782, bacteriophage N4 receptor, outer membrane subunit; Provisional.	0
NC_023076.1\|WP_024087216.1\|2896327_2897641_+\|hypothetical-protein	gnl\|CDD\|372583	pfam13372, Alginate_exp, Alginate export. This domain forms an 18-stranded beta-barrel pore which is likely to act as an alginate export channel.	0.000837979
NC_023076.1\|WP_024087210.1\|2879228_2880320_+\|GGDEF-domain-containing-protein	gnl\|CDD\|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	1.52689e-50
NC_023076.1\|WP_015270567.1\|2889698_2890820_-\|quinohemoprotein-amine-dehydrogenase-subunit-beta	gnl\|CDD\|211887	TIGR03907, QH_beta, quinohemoprotein amine dehydrogenase, beta subunit. Quinohemoprotein amine dehydrogenase is a three subunit enzyme with both a heme group and a cysteine tryptophylquinone group derived by post-translational modification of the gamma subunit. This model describes the beta subunit. This enzyme catalyzes oxidative deamination of primary aliphatic and aromatic amines (). [Energy metabolism, Amino acids and amines].	0
NC_023076.1\|WP_024087217.1\|2897779_2899072_-\|phenylethylamine-degradation-protein-PeaF	gnl\|CDD\|223717	COG0644, FixC, Dehydrogenases (flavoproteins) [Energy production and conversion].	6.26919e-16
NC_023076.1\|WP_015270568.1\|2891177_2892608_-\|quinohemoprotein-amine-dehydrogenase-maturation-protein	gnl\|CDD\|274848	TIGR03906, quino_hemo_SAM, quinohemoprotein amine dehydrogenase maturation protein. Members of this protein family are radical SAM enzymes responsible for post-translational modifications to the gamma subunit of quinohemoprotein amine dehydrogenases. Ono, et al. () suggest that this protein is responsible for intrapeptidyl thioether cross-linking rather than cysteine tryptophylquinone biogenesis in the gamma subunit. [Protein fate, Protein modification and repair].	0
NC_023076.1\|WP_024087218.1\|2899064_2899742_-\|peptidase-S8	gnl\|CDD\|173817	cd07492, Peptidases_S8_8, Peptidase S8 family domain, uncharacterized subfamily 8. This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.	1.54752e-17
NC_023076.1\|WP_024087215.1\|2892657_2894223_-\|quinohemoprotein-amine-dehydrogenase-subunit-alpha	gnl\|CDD\|274849	TIGR03908, QH_alpha, quinohemoprotein amine dehydrogenase, alpha subunit. Quinohemoprotein amine dehydrogenase is a three subunit enzyme with both a heme group and a cysteine tryptophylquinone group derived by post-translational modification of the gamma subunit. This model describes the beta subunit. This enzyme catalyzes oxidative deamination of primary aliphatic and aromatic amines (). [Energy metabolism, Amino acids and amines].	0
NC_023076.1\|WP_024087219.1\|2899731_2901465_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	1.63387e-136
NC_023076.1\|WP_024087214.1\|2887886_2889560_-\|AMP-binding-protein	gnl\|CDD\|237145	PRK12583, PRK12583, acyl-CoA synthetase; Provisional.	0
NC_023076.1\|WP_015270558.1\|2870684_2872244_-\|threonine-ammonia-lyase,-biosynthetic	gnl\|CDD\|237111	PRK12483, PRK12483, threonine dehydratase; Reviewed.	0
NC_023076.1\|WP_024087212.1\|2883901_2887030_+\|multidrug-efflux-RND-transporter-permease-subunit	gnl\|CDD\|273335	TIGR00915, Probable_aminoglycoside_efflux_pump, The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family. Proteins scoring above the trusted cutoff (1000) form a tight clade within the RND (Resistance-Nodulation-Cell Division) superfamily. Proteins scoring greater than the noise cutoff (100) appear to form a larger clade, cleanly separated from more distant homologs that include cadmium/zinc/cobalt resistance transporters. This family is one of several subfamilies within the scope of pfam00873. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Unknown substrate].	0
NC_023076.1\|WP_004375838.1\|2890852_2891176_-\|quinohemoprotein-amine-dehydrogenase-subunit-gamma	gnl\|CDD\|312520	pfam08992, QH-AmDH_gamma, Quinohemoprotein amine dehydrogenase, gamma subunit. Members of this family contain a cross-linked, proteinous quinone cofactor, cysteine tryptophylquinone, which is required for catalysis of the oxidative deamination of a wide range of aliphatic and aromatic amines. The domain assumes a globular secondary structure, with two short alpha-helices having many turns and bends.	1.05144e-47
NC_023076.1\|WP_013972837.1\|2878249_2879089_+\|DUF4434-family-protein	gnl\|CDD\|182155	PRK09936, PRK09936, DUF4434 family protein.	3.67037e-149
NC_023076.1\|WP_003259966.1\|2872425_2872857_-\|PACE-efflux-transporter	gnl\|CDD\|226610	COG4125, COG4125, Predicted membrane protein [Function unknown].	2.62035e-41
NC_023076.1\|WP_013972839.1\|2880436_2881735_-\|two-component-sensor-histidine-kinase	gnl\|CDD\|236724	PRK10604, PRK10604, sensor protein RstB; Provisional.	3.34747e-72
NC_023076.1\|WP_024087213.1\|2887091_2887667_+\|molybdenum-cofactor-guanylyltransferase-MobA	gnl\|CDD\|234725	PRK00317, mobA, molybdopterin-guanine dinucleotide biosynthesis protein MobA; Reviewed.	1.26195e-79
NC_023076.1\|WP_003259958.1\|2881741_2882443_-\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	1.01275e-81
NC_023076.1\|WP_024087211.1\|2882714_2883890_+\|efflux-RND-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|169982	PRK09578, PRK09578, MexX/AxyX family multidrug efflux RND transporter periplasmic adaptor subunit.	2.47986e-117
NC_023076.1\|WP_013972847.1\|2894681_2896175_+\|aldehyde-dehydrogenase-family-protein	gnl\|CDD\|143410	cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins. ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. Also included in this subfamily is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial, homotetramers that oxidize acetaldehyde and glycolaldehyde, as well as, the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Also included is the AldA aldehyde dehydrogenase of Aspergillus nidulans (locus AN0554), the aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) of Saccharomyces cerevisiae, and other similar sequences.	0

>NC_023076.1|WP_024087213.1|2887091_2887667_+|molybdenum-cofactor-guanylyltransferase-MobA
MPDALPPCSILILAGGRGQRMGGRDKGLVDWQGEPLVAHVQRVVRPLSDDLVISCNRNQKAYQAYADQLVGDAEADYPGPLAGVIAGLKVARHEWVVLLACDAPLVDRGLIEDLLHLAVTSDIAAMVRQGGYWQPMFSVLPRRVLPVLEQAWVAGERSLQKALLREAVQGLECVDDDRRLSNFNSPELLQG
>NC_023076.1|WP_024087212.1|2883901_2887030_+|multidrug-efflux-RND-transporter-permease-subunit
MPQFFIDRPVFAWVVALFILLAGALAIPQLPVAQYPNVAPPQVEIYAVYPGASAATMDESVVSLIEQELNGADNLLYFESQSSLGSATITATFAPGTNPDLAQVDVQNRLKVVESRLPRPVTQQGLQVEKVSTGFLLLATLTSEDGKLDETALSDILARNVMDEIRRLKGVGKAQLYGSERAMRIWIDPRKLIGFNLTPNDVAEAIAAQNAQVAPGSIGDLPTRGTQEITANVVVKGQLSTPEEFAGIVLRANPDGSTVTIGDVARVEIGAQEYQYGTRLNGKPATAFSVQLSPGANAMETATLVRAKMQDLARYFPEGVKYDIPYDTSPFVKVSIEQVINTLFEAMLLVFAVMFLFLQNLRYTLIPTLVVPVALMGTFAVMLAMGFSVNVLTLFGMVLAIGILVDDAIVVVENVERIMAEEGLPPKEATRKAMGQISGAIVGITLVLVAVFLPMAFMQGSVGVIYQQFSLSMAVSILFSAFLALSLTPALCATLLKPVAKGEHHERKGFFGWFNRRFEGMSNGYQRWVVQALKRSGRYLLVYALLLAVLGYGFSQLPTAFLPTEDQGYTITDIQLPPGASRMRTEQVAAQIEAHNAEEPGVGNTTLILGFSFSGSGQNAALAFTTLKDWSERGADDSAQSIADRATMAFTQLKDAVAYSVLPPPIDGLGESTGFEFRLQDRGGMGHAELMAARDELLANAGKSKVLTNVREASLAESPQVQLEIDRRQANALGVSFADIGSVLDVAVGSSYVNDFPNQGRMQRVVVQAEGDQRSQVEDLLKIHVRNDSGKMVPLGAFVQARWVSGPVQLTRYNGYPAVSISGEPAAGYSSGEAMAEIERLVAQLPAGAGLEWTGLSLQERLSGSQAPMLMALSLLVVFLCLAALYESWSIPTAVLLVVPLGVLGAVLAVTLRGMPNDVFFKVGLITLIGLSAKNAILIIEFAKSLVDQGVDAADAAVQAARLRLRPIVMTSLAFILGVVPLAIASGASSASQKAIGTGVIGGMLSATLAVVFVPVFFVVVMRLAGRRQAGKADTQAVTSDS
>NC_023076.1|WP_024087211.1|2882714_2883890_+|efflux-RND-transporter-periplasmic-adaptor-subunit
MSTTLPPRLRPLALLAFLSLSLAGCDDSAEQEEQAPTPQVRVETLQLQPLAISSELSGRILAPRTAEVRARVAGVVLKRVYREGSDVKQGDVLFLIDPAPFKADHDSARATLAKAEATLYQARLQEQRYRELVDDKAVSRQEYDNAKASYLQADAAVAEARAALERARLNLGYATVTAPISGRIGRAQVTEGALVGQNETTPLATIQQLDPIHADVTQSTRELNALRRALRAGELQQVGDGQARATLIQDDGSTYPLPGKLLFSDISVDPSTNQITLRSEFPNPDLDLLPGSYVRVRLEQAVQPKGLSVPQRAILRDSAGVPKVLVVDPQARVSDRQVVLGSAQGDRWIVSEGLAPGERVVVEGLQHVKAGDQVQVDNASGASPIAQHTGQ
>NC_023076.1|WP_003259958.1|2881741_2882443_-|response-regulator-transcription-factor
MPNIFLVEDDSALSELIASYLQRNDFHVQVIARGDHVLDEYRRQKPDLVILDLMLPGIDGLQLCRLLRQESQGLPILMLTARDDSHDQVLGLEMGADDYVTKPCEPRVLLARVRTLLRRSSVNEPRLDNDLILIGGLRIDLAERTVSWRGEEVELSSGEYNLLVVLARNAGEVLNRDRILQQLRGIEFNGTDRSVDVAISKLRRKFDDNAGEARKIKTVWGKGYLFSRVEWEC
>NC_023076.1|WP_013972839.1|2880436_2881735_-|two-component-sensor-histidine-kinase
MLKILVRLYLVIIVAYAGALLFIPDTIVGLFQDRFMAYNLDQAKGVQSLIVRQFRQAPREQWPAVEQELASDFAPLELQLLRMDQADLSEDEQARLEHGLYAVRIAEWGYYETVLAPLDKEWLVRLHSPPDPLDINVLSWGVTVLIGAAMLGCLLLWVWPHWRDLERLKETARRLGQGQMAERTHISPHSNIGELAGVFDTMASDLERHVNQQRELLNAVSHELRTPLTRLDFGLVLLFDEVPPASRKRLLELVGHVRELDELVLELLSYSRLYNADQARERVEVSLLELVDSVLGGFAEELDGRGIQWEVRAEGDLPRFVLDPRLTARAVQNLVRNAMRYCDESLLLRLRLEDDGACLVTVEDDGIGIPVEERERIFQPFYRLDRSRDRNTGGFGLGLAISRRAIEGQGGTLTVAQSALGGAQFRIRLPAG
>NC_023076.1|WP_024087210.1|2879228_2880320_+|GGDEF-domain-containing-protein
MFKTIEAHVRKQVAPAALRAEFRQHEFEAMRPFCLLVFCVSILIWLVFDLIVSFLGGQGFTWLSYLFITLLGSLTVVLRFTRRSHHFDVLNLLFIAAITLGMRLVIEGIPVAQRPVWLVLGVSTVLYAVSVLPVRRWSFFCAMAITWVVLNPFYHTRIEADALEGAMLFSYAVFLSGLVVYSYLQMRKAKLHNFYLSKVLLDQAYVDALTEIPNRRSFMAQAGHQLRLATAEQYLAMIDIDNFKRVNDRFGHDVGDEVLKRVALHIKASMAGYEFARLGGEEFAIFFQGLDQQGAEQRVAALCQRVREDVGEHPVTISIGLARVDQGDSLTTALVRADQALYEAKHSGKDRFVLWSARLAESD
>NC_023076.1|WP_013972837.1|2878249_2879089_+|DUF4434-family-protein
MRTFLALCLLALCLPASADQRLFYQPLNRDANVTPAQWQQLWHATVAQGGKTLIVQWSAYGDSDFGGARGWLADSLRSARAQGLQLVLGLYMDPAYYQRIDELDGEGLNSYWKAQLGRSLSQYRQLRQAWQLPVDGWYLPMELDDHHFREAERRDALHSQLQAFNRQLDKPLHISAFSAGKLSPRVNAAWLDQLAGLGLTVWWQDGAGTGRLPALVRQGYEQALPCRVGVVREAFRQVSAPGQAFRAEPAQPKLGAGCHAEAVFDLRYRPWARGVLPTN
>NC_023076.1|WP_024087209.1|2875244_2878250_+|phage-receptor
MKPRFSLTFTGLLLCSAALPCAASAPMTDFQRFTSYPFMERSYREAKKDNWAEVERLTRHVLGRVPNNDEARALLVEALAHQRRYKEAEALAEQLGDSPEHANALLELRLTWIEQDPPPASQVEQWLASSDGAQRVRLWQAYSLSLARFGGAARALDWLNHLPAQGDGQVLRLARANFAEQLRNWKETIEQLQPLAEQGQLPAQDWQRLANAYIQQVDEKGLKALLPSAPSPDAANQARLAMANRAIAVGHNQQAQRWLQALPTAELNQPEQRQQLWELAREGDDAPLVQRLSNELQRPCLETVDWLSLHDPQLAREQFKGCTASTAPRAYAVLKQRLYGDPPQPPQPRTAAEWEQRYRQSGDMAALEQTTFLLMQQGHDEHARQLLEQAYDRHQGRLAPSLLQRLGNLYARNDGPLDARRMLGLVPRVNATTRAQLLGRLAEAGQCDAVRQAVPATPSEPGQYRALGRCAMPDQPGEAVVYYQAAERLGDSGSRLPLAYALEAAGDSEAALPIWRTQPDSAWTDNARLTAARGALNAGDAQAARRYWDAAAHDSADDWALGAAIAQRQGDYQAALGFQRQALAHNPRADHYYAASSTAQLAGDSAQSSAWLAEAVRLAPDQPRYRADYGMRLAGSTDKTQRRQSIPYLERATHDFPEDYRLGETLALRYDEAEDSASARRELRRILDVEQDLVDGDDEYGSLEARKYRQRRAHENLSRRDTITLASTWSPAGTSTNDKFLDNGQRSGTSRRAQSQNVQLAMWDHALGEEPSRNGSTLSVYGRVLFGGQSRTDYAQSMGTGVGLRYKPFGQANLNLYAELYHQRQIDEEHYRGLSLGELLSPAKVGGNWGDLRHHAESSNDLLLRATASFLDQGDWRNDWRVDEDDWNERFLYLDAAWWTRAGDHAWLSRYQQGHAWKLPGSSPQTIMPYGFVEFSSQDPSNDWRQDARAGVGVRWQWWFDDDRYNAYRGSLKVRAEYQQSLGGNLYERANGVLVGAEMTF
>NC_023076.1|WP_003259966.1|2872425_2872857_-|PACE-efflux-transporter
MQGKARKIVQAILYEAIAVACVAPALELAFGAGMAQSTVLSVLMSGIAMSWNMAYNWVFERWEARQHRRERTFLRRLLHALGFEGGLVLILLPLVAYWLDVSLWAALLTNLALFVFFFVYAFVFQWGFDKVFDVPLSAQQAKC
>NC_023076.1|WP_015270558.1|2870684_2872244_-|threonine-ammonia-lyase,-biosynthetic
MTSFVSPRSTVTPQQLLSEQVRRILAAPVYDLAIETPLQAAPALSASLGNQVLLKREDLQPTFSFKIRGAYTRLSRLSTVQRERGVITASAGNHAQGVALAASHLGMKATIVMPTTTPSLKVEGVRSRGGHVVLHGESFPHALAHALKLADSEGATFVPPFDDPDVIAGQGTVAMEILRQRPGALDAIFVPVGGGGLIAGIAAYVKYLRPEVKVIGVEPEDSNCLQAAMAAGERVILPQVGTFADGVAVAQIGAHCFELCRHFVDEVVTVSSDELCAAIKDIYDDTRSITEPSGALAVAGIKKYVARDGVQGQTLVAIDSGANVNFDRLRHVAERAELGEQREAIIAVTIPEQPGSFRAFCQALGKRQITEFNYRYYPGKEARLFVGVQTHPLHDPREQLLASLREQGYSVLDLTDNELAKLHVRHTVGGHAAPGADERVLRFEFPERPGALLGFLERLGKRWNISLFHYRNHGAAEARVFAALEVPGDELAGLPLALDEMGYRYWDETDNPAYKLFLG
>NC_023076.1|WP_024087214.1|2887886_2889560_-|AMP-binding-protein
MPQPSYSQGNQDKPLLTQCIGDAFDTTVARFPDRDALVVRHQALRYTWQQLAEAVDQHARALMALGVQPGDRLGIWAPNCAEWCITQFASAKVGAILVNINPAYRSSELDYALGQSGCRWVICADAFKTSDYHAMLLGLVPGLAGGQPGALICERFPELRGVVSLAVAPPAGFLAWHDLQARAAAVSREALAERQAQLRCDDPINIQYTSGTTGFPKGATLSHSNILNNGYMVGESLGLTEHDRLVVPVPLYHCFGMVMANLGCMTHGSTLIYPNDAFDPLATLRAVAEEKATALYGVPTMFIAELDHPQRGEFDLSSLRTGIMAGATCPIEVMRRVIGEMHMAEVQIAYGMTETSPVSLQTGASDDLERRVTSVGRTQPRLENKVIDADGNTLPRGEIGELCTRGYSVMLGYWNNPKATAESIDEEGWMHTGDLAVMDEQGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGVPCSKYGEEIVAWVRLHPGHTASAEELRDWAKARIAHFKVPRYFRFVDEFPMTVTGKVQKFRMREISVEELSAR
>NC_023076.1|WP_015270567.1|2889698_2890820_-|quinohemoprotein-amine-dehydrogenase-subunit-beta
MKAGRCASLALTIAATACAGLVQAADTGPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGVLNRLAKYDLKQRKLIKAANLDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLPGGDMSTTTPQVFIR
>NC_023076.1|WP_004375838.1|2890852_2891176_-|quinohemoprotein-amine-dehydrogenase-subunit-gamma
MKHLKPLNNKARILEQAAAEDRVEEVMAMSAVAGCTATTDPGWEVDAFGGVSSLCQPMEADLYGCSDPCWWPAQVPDMMSTYQDWNAQASNSAEDWRNLGTVFPKDK
>NC_023076.1|WP_015270568.1|2891177_2892608_-|quinohemoprotein-amine-dehydrogenase-maturation-protein
MGALLNLVERNLHEVQVDADRMLFHIPSSSLFTADAVTGGIIDTLRQQGCSAEELMQRLGQRFAGSDIQDTLRELIALELVSDGSPLTPEIALKQVERTALNTVVLNVNTGCNLSCTYCYKEDLDKPSAGKKMSTATAEASVEMLLKESPDEQRYSVVFFGGEPLSNRPLIEHMVAYCERRFAEAGKQVEFIMTTNATLLNEEIVDWLNAHRFGLSISIDGPKTVHDRNRITVGGQGTYDVVRRKVDMLLSRYHSRPVGARVTLTRGITDVETIWNHLFNELGFAEVGFAPVTSGDMANFNLTGEELVQVFANMKALGRRYLEAALEHRNIGFSNLHQLITDIHEGHKKALPCGAGLKMLAVDHEGELNLCHRFTGSSLPTFGNVHQGVKQAQLNDFLSQRLDRSNTGCDSCRIRNLCSGGCYHESYARYGDPQHPTYHYCELMRDWVDFGIEVYSRIMAANPAFIDRYITPRKAH
>NC_023076.1|WP_024087215.1|2892657_2894223_-|quinohemoprotein-amine-dehydrogenase-subunit-alpha
MKTTRLRRHAGKLALVAAALLSTQAMAAEQGPSLLQNKCMGCHIPEGNDTYSRISHQRKTPEGWLMSIARMQVMHGLQISDDDRRTLVKYLADKQGLAPSETDGVRYAMERRLNTVEQFDTQLSETCGRCHSGARVALQRRPAKEWEHLVNFHLGQWPSLEYQAQARDRDWLPIALQQVVPDLAKRYPLESAAWAEWQKARPKADALPGQWAFSGHMLAKGDVRGVMSVTPDQGDTFKVEVKGAYADGTPFNGSGSAILYNGYEWRGNVKVGDANLRQVFAALDGEMKGRMFEAEHDERGLDFTAVKEGKARLLAVQPAFIKAGGESEITLVGSGLAGKPDLGASVEVTEVLEQTPTLVRVKARAAADAKPGQREVAIGALKGVNLAVYDKVEEVKVVPAFSIARIGENGASVPKVQGRFEAEAWGKDANGQPLRIGYLPASWKVEPFNERAVEDEDVKFAGKMQADGVFVPGGAGPNPERKMMTNNAGNLKVIATLADGGQTGEGHMIVTVQRWNNPPLP
>NC_023076.1|WP_013972847.1|2894681_2896175_+|aldehyde-dehydrogenase-family-protein
MLSELPILPATRAFLERKLKMRIGADWQDAASGRTLSFRNPATGEVLGEVPAAEAEDVDRAVRAARQAFDDSPWSRLRPRERQNLLWRLADLMERDARQLAELECLNNGKSAAVAQVMDVQLAIDFLRYMAGWATKIEGSTVEASMPLMPNDQFHGFVRREAVGVVGAIVAWNFPLLLACWKLGPALATGCTVVLKPADETPLSVLKLAELVDEAGYPAGVFNVVTGTGLNAGAALSRHPGVDKLTFTGSTEVGKLIGKAAMDNMTRVTLELGGKSPTIVMPDANLQEAAAGAATAIFFNQGQVCCAGSRLYVHRKHFDNVVADIAGIANGMKLGSGLDPAVQMGPLISAKQQDRVTGYIELGRELGATIACGGEGFGPGYFVKPTVIVDVDQRHRLVQEEIFGPVLVAMPFDDIDEVIGMANDNPYGLGASIWSNDLSAVHRMIPRIKSGSVWVNCHSALDPALPFGGYKMSGVGREMGAAAIDHYTELKSVLIKL
>NC_023076.1|WP_024087216.1|2896327_2897641_+|hypothetical-protein
MRHKLACTLALLFAAPITQAYELYNHDGTTLNADLEALFGAFHSDESFNLAGNRKPGSTAWQEGYVKYGLSGSQALADSGALYGAFNLLSSATWGDGDAAGLTLGDERRTAIEDLYLGWRSANLFPALGEDGVDISGGRQVVTLGDGFLIQGDPVNLGKVDLGANFDRGGAYYLAARKAFDRTAVLRLGGKQGWRSDLMWLKSDNHYQADTSLAVANLEHVADAGTVGLSWIRGLDVDQRYAQIMGLEHRDGMDTASLRGRGNLGVKDLELAAEYVTQDKTGGRENAWYLEGNWTFSELPWSPTATYRYSRFSEDFDPLFYGLSRGYGTWFQGEVAANYAGPFNSNSQVHHVALKGKPRDNLTVGALYFDFDTLDTDQGNLGGRELDLYVEWMVNDHLLISPLVGFYKPERSAANGGTQLGGRDTGTYMQLIVGTFF
>NC_023076.1|WP_024087217.1|2897779_2899072_-|phenylethylamine-degradation-protein-PeaF
MAEPRIVVLGAGPAGAATAIGLRRLGYAVTVVSEWRRFAAVEGVSQRVLDGLRHAGLGGALRQAAMPATRQVHWNGQQLHLNQEFLLDRQRFDRALRDDLQRAGVSVVEGRVREVVREVGHGIRLDDGQVLQADFLVEARGRQAPLAADRLRGPETVSLLNVWQAAPGAPASAVESLADGWAWMARLEDGRCYWQVTLDAAGLPGKAGLADYCAARRAGSVLVAELFDARALAPAEVHARSSTAILAGECVGQDWIRVGDAAMAVDPLSGNGIFQSLSSALQAPVVINTLLRRPERAGLARQFHQQRIEQLFLRFARIGRDFYGQEQGRVGQPFWARRQGWPDMQALHVAADWSAVRVERRPVLRDGLVDEAEVVVTADQPLGVWHLQGVELAPVVRGLRSGRPIEAVLSGLPGEQQMMVRRWLLEQGLV
>NC_023076.1|WP_024087218.1|2899064_2899742_-|peptidase-S8
MGTDVRVGVIDSGCTPEQASALLGARRFWLEDGQLREGDMLPDQLGHGSAVLAGLQREAGPVPVLLAQVFGAQASTSALQVAAALLWLVEAGVTLVNLSLGLQQDRPVLHQACAEALAAGVLLCASSPAQGGPVYPASYPGVIRVTGDARCAPGQWSWLGTRQADFGGYVGAGGRAGASLGCAALSGRIAALLRDEPGMGHQQVHDWLRHHAAFTGPERRGVGHG
>NC_023076.1|WP_024087219.1|2899731_2901465_-|ABC-transporter-ATP-binding-protein
MGGLFARLVESSDPVLMRQALAWLYGFVRPHRRAIGLLLGLSLGASLLALAQPWLVKTLIDEGLLAKDYQTLWHMAAIMIGAGLLGTVLAGVNRYLHTRLSGRILFALRDDLYRHLQQLSPTFYGRRRIGDILSRLDGDVAEIQRFAVDSLFSAVSAVIGLVGAVVLMLMLSWQLSLLLALLVPIEVLWLRWMRRKVAREVRNLRERSADVSSFLVETLPAMKFIQAAGQQGREAGRLDQLGQGYMRQLLKVQVTEFFTQAIPGTLTSWCRACAFLVGGWWVIQGTWQLGALIAFSTYMGMAVGPVQSLLGLYVAVQRMAVSLGRVMELKQEAVAVRPAANPQPVPDGPGELRLEGVSFAHEGRQGAVLNDVQVCVPGGLKVAISGASGVGKSTLIDLLQRFYDPDAGRILLDGTDLRELDLAALRRRIAVVSQDIVLFRGTLAQNLAYGVPEASREELERVVRLARLDSLVDSLPLGLDGLLGERGQQLSGGQKQRIAIARAVLQASAILVLDEATSAVDEATEREVIAAIDQLFAGRTRILISHRASTLADADLHLQLHAGQLQVLPEEVIRHGH

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

648255 : 656034

Thermobifida_phage(16.67%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013971076.1\|648255_649110_-	RNase adapter RapZ	A0A0R8VB27	Thermobifida_phage	6.2e-09	32.8
WP_015269060.1\|649112_649577_-	PTS IIA-like nitrogen regulatory protein PtsN	NA	NA	NA	NA
WP_003255135.1\|649589_649898_-	ribosome hibernation promoting factor	A0A0K1LP60	Escherichia_phage	4.4e-05	34.1
WP_015269061.1\|649977_651471_-	RNA polymerase factor sigma-54	NA	NA	NA	NA
WP_003257916.1\|651646_652372_-	LPS export ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	2.9e-23	27.0
WP_015269063.1\|652372_652897_-	lipopolysaccharide transport periplasmic protein LptA	NA	NA	NA	NA
WP_003257918.1\|652883_653456_-	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA
WP_024086339.1\|653464_653989_-	HAD family hydrolase	A0A140XBD6	Dickeya_phage	3.1e-27	47.8
WP_003257920.1\|654001_654976_-	KpsF/GutQ family sugar-phosphate isomerase	A0A2P0VNK5	Tetraselmis_virus	3.6e-37	33.1
WP_012270662.1\|655224_656034_+	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	4.5e-25	32.5

DBSCAN-SWA_2

1065591 : 1072951

Escherichia_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_024086458.1\|1065591_1066536_-	NAD-dependent epimerase/dehydratase family protein	A0A1V0SAI6	Catovirus	1.9e-38	31.9
WP_024086459.1\|1066598_1067711_-	acyltransferase	NA	NA	NA	NA
WP_024086460.1\|1067805_1068354_-	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A291LA62	Escherichia_phage	1.2e-50	55.4
WP_024086461.1\|1068353_1069244_-	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	2.7e-100	59.6
WP_024086462.1\|1069240_1070146_-	dTDP-4-dehydrorhamnose reductase	I7HXC9	Enterobacteria_phage	3.8e-25	33.4
WP_024086463.1\|1070142_1071219_-	dTDP-glucose 4,6-dehydratase	K7QJG5	Escherichia_phage	1.3e-99	52.1
WP_024086464.1\|1071928_1072951_-	UDP-glucose 4-epimerase GalE	A0A2K9L5H6	Tupanvirus	3.1e-87	49.2

DBSCAN-SWA_3

1580647 : 1645500

Leptospira_phage(20.0%)

protease,coat,integrase,transposase

attL 1570615:1570641|attR 1605313:1605339

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1570615:1570641	attL	NA	NA	NA	NA
WP_013971142.1\|1580647_1582180_-\|transposase	IS66-like element ISPpu15 family transposase	S5VTD3	Leptospira_phage	9.9e-82	34.9
WP_010951896.1\|1582198_1582555_-	IS66 family insertion sequence element accessory protein TnpB	S5VXZ8	Leptospira_phage	9.8e-17	41.2
WP_155252247.1\|1582846_1583548_-	DUF4760 domain-containing protein	NA	NA	NA	NA
WP_079278445.1\|1583555_1585046_+\|transposase	IS21 family transposase	NA	NA	NA	NA
WP_013970780.1\|1585038_1585839_+	ATPase	A0A2L1IVB6	Escherichia_phage	3.7e-32	35.5
WP_024086628.1\|1586180_1587818_-	malate dehydrogenase (quinone)	NA	NA	NA	NA
WP_024086629.1\|1588951_1589443_-	transcription elongation factor GreB	NA	NA	NA	NA
WP_024086630.1\|1589733_1590327_-	hypothetical protein	NA	NA	NA	NA
WP_024086631.1\|1590326_1594334_-	hypothetical protein	NA	NA	NA	NA
WP_024086632.1\|1594394_1594730_-	hypothetical protein	NA	NA	NA	NA
WP_024086633.1\|1594896_1596270_-\|integrase	site-specific integrase	NA	NA	NA	NA
WP_024086634.1\|1596775_1598140_+	hypothetical protein	NA	NA	NA	NA
WP_024086636.1\|1598859_1601367_-	ABC transporter permease	NA	NA	NA	NA
WP_003259775.1\|1601366_1602050_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	4.0e-35	37.9
WP_023663107.1\|1602060_1602666_+	arylesterase	NA	NA	NA	NA
WP_013971899.1\|1602724_1603015_+	hypothetical protein	NA	NA	NA	NA
WP_003259779.1\|1603126_1604104_+	L,D-transpeptidase family protein	NA	NA	NA	NA
WP_003259780.1\|1604236_1604488_-	hypothetical protein	NA	NA	NA	NA
WP_003259781.1\|1604997_1605279_+	N-acetyltransferase	NA	NA	NA	NA
WP_013971901.1\|1605409_1606486_-	3-deoxy-7-phosphoheptulonate synthase	A0A2I6UFP9	Klebsiella_phage	1.1e-82	50.5
1605313:1605339	attR	NA	NA	NA	NA
WP_024086637.1\|1606717_1607665_+	putative 2-dehydropantoate 2-reductase	NA	NA	NA	NA
WP_013971903.1\|1607789_1608287_+	universal stress protein	NA	NA	NA	NA
WP_013971904.1\|1608416_1609391_+	HTH-type transcriptional regulator CysB	NA	NA	NA	NA
WP_015269712.1\|1609532_1610267_-	phosphoadenylyl-sulfate reductase	NA	NA	NA	NA
WP_013971906.1\|1610433_1611780_-	aminodeoxychorismate synthase component I	S4VT78	Pandoravirus	5.0e-45	32.0
WP_013971907.1\|1611966_1612947_-	alpha-L-glutamate ligase-like protein	NA	NA	NA	NA
WP_013971908.1\|1612946_1614482_-	inactive transglutaminase family protein	NA	NA	NA	NA
WP_023662146.1\|1614487_1615024_-\|protease	ATP-dependent zinc protease	NA	NA	NA	NA
WP_013971909.1\|1615353_1616070_+	GntR family transcriptional regulator	NA	NA	NA	NA
WP_003259689.1\|1616066_1616957_+	methylisocitrate lyase	NA	NA	NA	NA
WP_013971911.1\|1617140_1618268_+	2-methylcitrate synthase	NA	NA	NA	NA
WP_015269715.1\|1618437_1621026_+	Fe/S-dependent 2-methylisocitrate dehydratase AcnD	NA	NA	NA	NA
WP_013971913.1\|1621159_1622350_+	2-methylaconitate cis-trans isomerase PrpF	NA	NA	NA	NA
WP_013971914.1\|1622504_1623989_+	2-methylcitrate dehydratase	NA	NA	NA	NA
WP_023661205.1\|1624165_1626775_-	bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase	NA	NA	NA	NA
WP_013971916.1\|1627145_1627661_+	DUF1289 domain-containing protein	NA	NA	NA	NA
WP_003256551.1\|1627791_1628148_-	6-carboxytetrahydropterin synthase QueD	NA	NA	NA	NA
WP_015269721.1\|1628201_1629281_-	patatin-like phospholipase family protein	NA	NA	NA	NA
WP_003256549.1\|1629561_1629873_+	PepSY domain-containing protein	NA	NA	NA	NA
WP_013971918.1\|1629872_1630187_+	PepSY domain-containing protein	NA	NA	NA	NA
WP_013971919.1\|1630187_1630856_+	response regulator transcription factor	NA	NA	NA	NA
WP_024086638.1\|1630852_1632172_+	sensor histidine kinase	NA	NA	NA	NA
WP_024086639.1\|1632514_1633669_+	HPP family protein	NA	NA	NA	NA
WP_013971922.1\|1633642_1634509_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_013971923.1\|1634689_1636579_+	propionyl-CoA synthetase	A0A2H4PQU7	Staphylococcus_phage	1.7e-54	29.5
WP_024086640.1\|1636687_1637758_-	cell division protein ZapE	NA	NA	NA	NA
WP_003256418.1\|1637916_1638342_+	DUF1810 domain-containing protein	A0A2H4UVK5	Bodo_saltans_virus	1.3e-10	37.6
WP_013971925.1\|1638343_1638586_-	hypothetical protein	NA	NA	NA	NA
WP_013971926.1\|1639014_1641402_-	hybrid sensor histidine kinase/response regulator	Q8QNA2	Ectocarpus_siliculosus_virus	4.9e-11	26.9
WP_013971927.1\|1641415_1641877_-	response regulator	NA	NA	NA	NA
WP_013971928.1\|1641892_1644142_-	GAF domain-containing protein	B5LWN8	Feldmannia_species_virus	6.2e-32	21.8
WP_024086641.1\|1644405_1644933_+\|coat	spore coat protein U domain-containing protein	NA	NA	NA	NA
WP_003256412.1\|1644963_1645500_+\|coat	spore coat protein U domain-containing protein	NA	NA	NA	NA

DBSCAN-SWA_4

2305317 : 2367469

Pseudomonas_phage(46.43%)

holin,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_024086930.1\|2305317_2306502_-	DUF3596 domain-containing protein	A0A1W6JTA0	Pseudomonas_phage	2.5e-125	59.4
WP_024086933.1\|2306886_2307363_-	hypothetical protein	A0A1B0VM52	Pseudomonas_phage	1.6e-35	50.0
WP_024086935.1\|2307598_2307973_-	hypothetical protein	NA	NA	NA	NA
WP_044039975.1\|2307969_2308365_-	DUF2591 domain-containing protein	A0A125RNP6	Pseudomonas_phage	3.3e-13	38.9
WP_024086937.1\|2308370_2308652_-	hypothetical protein	NA	NA	NA	NA
WP_024086938.1\|2308648_2308900_-	hypothetical protein	A0A2H4J399	uncultured_Caudovirales_phage	1.2e-40	96.4
WP_044039976.1\|2308896_2309088_-	hypothetical protein	NA	NA	NA	NA
WP_024086940.1\|2309602_2309902_+	hypothetical protein	NA	NA	NA	NA
WP_024086941.1\|2309949_2310999_-	hypothetical protein	NA	NA	NA	NA
WP_044039723.1\|2311012_2311399_-	hypothetical protein	A0A2H4J2C6	uncultured_Caudovirales_phage	8.9e-64	93.0
WP_024086943.1\|2311402_2311711_-	hypothetical protein	A0A2H4J1V6	uncultured_Caudovirales_phage	1.4e-43	92.2
WP_024086944.1\|2311791_2312373_-	hypothetical protein	J9Q748	Salmonella_phage	1.5e-14	29.6
WP_024086945.1\|2312479_2312953_+	hypothetical protein	NA	NA	NA	NA
WP_024086946.1\|2312925_2313522_-	hypothetical protein	NA	NA	NA	NA
WP_024086947.1\|2313496_2313862_-	hypothetical protein	A0A2H4J0L9	uncultured_Caudovirales_phage	2.0e-57	90.9
WP_004573813.1\|2313943_2314132_-	hypothetical protein	NA	NA	NA	NA
WP_024086948.1\|2314135_2314801_-	3'-5' exonuclease	A0A059VJT9	Pseudomonas_phage	1.6e-92	71.3
WP_024086949.1\|2314861_2315518_-	hypothetical protein	A0A059VFZ1	Pseudomonas_phage	1.2e-84	73.5
WP_004573816.1\|2315529_2316162_-	AAA family ATPase	A0A059VF62	Pseudomonas_phage	3.3e-84	72.6
WP_155252248.1\|2316170_2316317_-	hypothetical protein	NA	NA	NA	NA
WP_024086952.1\|2316604_2316835_-	hypothetical protein	K4PAA5	Pseudomonas_phage	5.7e-10	46.1
WP_024086953.1\|2316831_2317086_-	hypothetical protein	NA	NA	NA	NA
WP_044039979.1\|2317107_2317521_-	hypothetical protein	NA	NA	NA	NA
WP_024086955.1\|2317848_2318145_-	hypothetical protein	NA	NA	NA	NA
WP_044047313.1\|2318196_2318409_+	hypothetical protein	NA	NA	NA	NA
WP_024086956.1\|2318815_2319130_+	DUF1654 domain-containing protein	A0A2D1GND3	Pseudomonas_phage	3.3e-24	61.9
WP_054882089.1\|2319266_2319962_-	hypothetical protein	NA	NA	NA	NA
WP_024086958.1\|2319936_2320293_-	hypothetical protein	NA	NA	NA	NA
WP_024086959.1\|2320424_2320661_-	hypothetical protein	NA	NA	NA	NA
WP_024086960.1\|2320663_2321485_-	LexA family transcriptional regulator	H2BD63	Pseudomonas_phage	9.1e-50	44.0
WP_024086961.1\|2321575_2321785_+	hypothetical protein	NA	NA	NA	NA
WP_019751332.1\|2321815_2322022_+	hypothetical protein	NA	NA	NA	NA
WP_044039727.1\|2322355_2323213_+	transporter	Q8W644	Enterobacteria_phage	9.5e-50	42.7
WP_024086962.1\|2323209_2323578_+	hypothetical protein	NA	NA	NA	NA
WP_031324594.1\|2323574_2324480_+	helix-turn-helix domain-containing protein	A0A1B0VME0	Pseudomonas_phage	3.0e-54	70.9
WP_024086963.1\|2324466_2325273_+	hypothetical protein	A0A1B0VMD9	Pseudomonas_phage	2.5e-60	52.3
WP_015269578.1\|2325272_2325515_+	hypothetical protein	NA	NA	NA	NA
WP_024086964.1\|2325514_2325853_+	hypothetical protein	A0A2H4JG78	uncultured_Caudovirales_phage	3.0e-07	38.5
WP_024086965.1\|2325849_2326059_+	MarR family transcriptional regulator	NA	NA	NA	NA
WP_024086966.1\|2326055_2326250_+	hypothetical protein	NA	NA	NA	NA
WP_080676046.1\|2326210_2326771_+	hypothetical protein	A0A2H4J8S0	uncultured_Caudovirales_phage	2.9e-23	90.5
WP_013972400.1\|2326763_2327234_+	hypothetical protein	A0A2H4J106	uncultured_Caudovirales_phage	4.5e-62	69.9
WP_024086968.1\|2327230_2327545_+	hypothetical protein	A0A2H4J249	uncultured_Caudovirales_phage	1.7e-12	43.6
WP_024086969.1\|2327535_2328138_+	hypothetical protein	L7TH85	Pseudomonas_virus	9.6e-57	55.3
WP_024088021.1\|2328274_2328865_+	hypothetical protein	A0A059VF83	Pseudomonas_phage	3.7e-61	58.7
WP_023661594.1\|2329104_2329614_+	acyloxyacyl hydrolase	A0A2H4J0I5	uncultured_Caudovirales_phage	1.1e-88	100.0
WP_023661593.1\|2329857_2330097_+	hypothetical protein	NA	NA	NA	NA
WP_023661592.1\|2330098_2330281_-	hypothetical protein	NA	NA	NA	NA
WP_023661591.1\|2330385_2330709_+\|holin	phage holin, lambda family	A0A0A0YUH2	Pseudomonas_phage	2.5e-35	74.3
WP_024086972.1\|2330766_2330997_+	hypothetical protein	A0A2C9CY14	Yersinia_phage	5.9e-15	56.3
WP_024086973.1\|2331019_2331208_+	hypothetical protein	NA	NA	NA	NA
WP_024086974.1\|2331204_2331777_-	hypothetical protein	NA	NA	NA	NA
WP_024086975.1\|2331854_2332463_+	hypothetical protein	A0A0S2SYA5	Pseudomonas_phage	1.7e-93	80.2
WP_024086976.1\|2332494_2332971_+	DUF2280 domain-containing protein	A0A1B0VMH2	Pseudomonas_phage	1.6e-67	82.3
WP_024086977.1\|2332945_2334268_+	hypothetical protein	A0A1B0VP58	Pseudomonas_phage	4.0e-241	91.2
WP_080676047.1\|2334264_2335650_+	DUF4055 domain-containing protein	A0A0H5AWC7	Pseudomonas_phage	2.2e-181	67.8
WP_044039732.1\|2335649_2336726_+	hypothetical protein	A0A0H5BBX3	Pseudomonas_phage	3.9e-101	53.7
WP_024086979.1\|2336877_2337666_+	hypothetical protein	A0A0S2SY92	Pseudomonas_phage	1.1e-95	84.8
WP_044039734.1\|2337768_2338749_+	hypothetical protein	A0A0S2SYD2	Pseudomonas_phage	1.3e-164	90.5
WP_024086981.1\|2338797_2339094_+	hypothetical protein	A0A0H5BBX8	Pseudomonas_phage	1.9e-05	54.5
WP_024086982.1\|2339093_2339462_+	hypothetical protein	A0A0S2SYB7	Pseudomonas_phage	1.2e-25	54.3
WP_024086983.1\|2339463_2339850_+	hypothetical protein	A0A2H4IZB5	uncultured_Caudovirales_phage	1.1e-37	61.5
WP_024086984.1\|2339852_2340524_+	hypothetical protein	A0A2H4J0Q3	uncultured_Caudovirales_phage	7.4e-58	53.6
WP_024086985.1\|2340520_2340949_+	hypothetical protein	A0A2H4J5P1	uncultured_Caudovirales_phage	1.4e-70	95.7
WP_024086986.1\|2340991_2341651_+\|tail	phage tail protein	A0A0S2SYG8	Pseudomonas_phage	3.8e-83	71.4
WP_024086987.1\|2341660_2342044_+	hypothetical protein	A0A2H4IYQ5	uncultured_Caudovirales_phage	1.4e-37	56.7
WP_044039736.1\|2342106_2342358_+	phage protein	A0A2H4JBP7	uncultured_Caudovirales_phage	2.4e-30	80.2
WP_024086989.1\|2342361_2345787_+\|tail	phage tail tape measure protein	A0A2H4JA74	uncultured_Caudovirales_phage	1.7e-174	47.9
WP_024086990.1\|2345786_2346125_+\|tail	phage tail protein	A0A2H4JI07	uncultured_Caudovirales_phage	6.2e-45	73.2
WP_024086991.1\|2346134_2346884_+\|tail	phage minor tail protein L	A0A0S2SY57	Pseudomonas_phage	1.8e-121	77.1
WP_024086992.1\|2346886_2347642_+	C40 family peptidase	A0A2H4J1J7	uncultured_Caudovirales_phage	1.7e-119	76.1
WP_024086993.1\|2347667_2347829_+	hypothetical protein	NA	NA	NA	NA
WP_144084425.1\|2347818_2348070_-	hypothetical protein	NA	NA	NA	NA
WP_024086994.1\|2348279_2348717_+	hypothetical protein	NA	NA	NA	NA
WP_024086996.1\|2349136_2349424_-	hypothetical protein	NA	NA	NA	NA
WP_024086998.1\|2349673_2349973_-	hypothetical protein	NA	NA	NA	NA
WP_144084426.1\|2350061_2350523_-	Arc family DNA-binding protein	NA	NA	NA	NA
WP_024087000.1\|2350594_2350771_+	Arc family DNA-binding protein	A0A2H4J2A5	uncultured_Caudovirales_phage	5.9e-07	63.3
WP_024087001.1\|2350845_2351700_+	antirepressor	A0A2H4J0P1	uncultured_Caudovirales_phage	1.6e-60	59.8
WP_024087002.1\|2351696_2352272_+	hypothetical protein	G1D3R9	Mycobacterium_virus	3.9e-31	35.3
WP_024087003.1\|2352264_2352723_+	hypothetical protein	NA	NA	NA	NA
WP_024087004.1\|2353092_2353455_+	hypothetical protein	NA	NA	NA	NA
WP_024087005.1\|2353535_2353880_+	hypothetical protein	NA	NA	NA	NA
WP_024087006.1\|2353930_2354518_+\|tail	tail assembly protein	A0A2H4J1H0	uncultured_Caudovirales_phage	1.3e-69	69.1
WP_024087007.1\|2354776_2355295_+	hypothetical protein	A0A0H5ARR4	Pseudomonas_phage	7.5e-58	58.0
WP_024087008.1\|2355351_2363433_+	DUF1983 domain-containing protein	A0A2H4J8Z6	uncultured_Caudovirales_phage	0.0e+00	60.4
WP_024087009.1\|2363429_2363810_+	hypothetical protein	NA	NA	NA	NA
WP_024087011.1\|2364025_2364244_+	hypothetical protein	NA	NA	NA	NA
WP_024087012.1\|2364398_2365385_+	acyltransferase	A0A1R3Y5Q6	Salmonella_virus	1.1e-06	24.1
WP_024087013.1\|2365452_2365884_+	lysozyme	A0A0S2SYD0	Pseudomonas_phage	3.5e-53	74.6
WP_024087014.1\|2365880_2366393_+	DUF2514 family protein	NA	NA	NA	NA
WP_023662106.1\|2366638_2366845_+	hypothetical protein	A0A2H4JG60	uncultured_Caudovirales_phage	7.9e-11	60.0
WP_024087016.1\|2366964_2367273_+	hypothetical protein	A0A2H4JER5	uncultured_Caudovirales_phage	6.5e-33	68.4
WP_013972437.1\|2367262_2367469_+	hypothetical protein	A0A2H4J7A7	uncultured_Caudovirales_phage	2.9e-05	42.9

DBSCAN-SWA_5

2484480 : 2551944

uncultured_Caudovirales_phage(62.86%)

protease,holin,capsid,portal,tail,plate,terminase,head,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013973518.1\|2484480_2485434_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_003258793.1\|2485922_2486423_+	methylated-DNA--[protein]-cysteine S-methyltransferase	M1PFU9	Streptococcus_phage	9.8e-23	43.0
WP_013972544.1\|2486426_2486669_-	hypothetical protein	NA	NA	NA	NA
WP_013972545.1\|2486665_2487409_-	carbon-nitrogen hydrolase family protein	NA	NA	NA	NA
WP_015270245.1\|2487485_2488001_-	DUF3016 domain-containing protein	NA	NA	NA	NA
WP_013972547.1\|2488076_2488784_+	serine/threonine protein phosphatase	A0A2H4J0P0	uncultured_Caudovirales_phage	2.5e-64	51.1
WP_003258789.1\|2488749_2489364_-	LysE family translocator	NA	NA	NA	NA
WP_024087055.1\|2489564_2490383_-	AraC family transcriptional regulator	NA	NA	NA	NA
WP_024087056.1\|2490514_2490892_+	LysE family translocator	NA	NA	NA	NA
WP_024087057.1\|2490919_2492116_+	ATP-binding protein	NA	NA	NA	NA
WP_024088022.1\|2492102_2492423_+	STAS-like domain-containing protein	A0A2H4J4X6	uncultured_Caudovirales_phage	1.5e-11	39.3
WP_155252249.1\|2492436_2492961_+	hypothetical protein	NA	NA	NA	NA
WP_024087059.1\|2493153_2493774_-	LysE family translocator	NA	NA	NA	NA
WP_079278445.1\|2494710_2496201_+\|transposase	IS21 family transposase	NA	NA	NA	NA
WP_013970780.1\|2496193_2496994_+	ATPase	A0A2L1IVB6	Escherichia_phage	3.7e-32	35.5
WP_024087060.1\|2497196_2498009_-	antirepressor	A0A2H4JG39	uncultured_Caudovirales_phage	3.4e-33	73.5
WP_024087061.1\|2498285_2498954_-	helix-turn-helix transcriptional regulator	A0A1W6JNY2	Morganella_phage	1.1e-34	41.1
WP_024087062.1\|2499056_2499281_+	helix-turn-helix transcriptional regulator	A0A127KNT2	Pseudomonas_phage	2.9e-14	58.6
WP_024087063.1\|2499893_2500412_+	hypothetical protein	NA	NA	NA	NA
WP_024087064.1\|2500404_2500623_+	conjugal transfer protein TraR	NA	NA	NA	NA
WP_024087065.1\|2500612_2502823_+	toprim domain-containing protein	A0A2D1GN57	Marinobacter_phage	3.8e-183	46.0
WP_024087066.1\|2502819_2503185_+	hypothetical protein	NA	NA	NA	NA
WP_024087067.1\|2503697_2504045_+\|holin	holin	B5TK61	Pseudomonas_phage	3.8e-42	72.2
WP_024087068.1\|2504205_2504787_+	hypothetical protein	A0A2H4JG15	uncultured_Caudovirales_phage	3.1e-60	66.3
WP_024087069.1\|2504791_2506822_+\|terminase	phage terminase large subunit family protein	A0A2H4J898	uncultured_Caudovirales_phage	5.3e-309	80.5
WP_024087070.1\|2506823_2507030_+	hypothetical protein	A0A2H4JA19	uncultured_Caudovirales_phage	7.1e-20	72.1
WP_024087071.1\|2507026_2508520_+\|portal	phage portal protein	A0A2H4JFL5	uncultured_Caudovirales_phage	1.1e-215	76.3
WP_024087072.1\|2508516_2509683_+\|protease	Clp protease ClpP	A0A2H4JDI2	uncultured_Caudovirales_phage	2.9e-134	69.0
WP_024087073.1\|2509685_2510033_+\|head	head decoration protein	A0A2H4JF15	uncultured_Caudovirales_phage	4.4e-30	64.2
WP_024087074.1\|2510094_2511090_+\|capsid	major capsid protein	A0A2H4J890	uncultured_Caudovirales_phage	3.6e-133	70.0
WP_024087075.1\|2511092_2511407_+	hypothetical protein	A0A2H4J879	uncultured_Caudovirales_phage	2.2e-28	60.6
WP_024087076.1\|2511403_2512066_+	hypothetical protein	A0A2H4JBV1	uncultured_Caudovirales_phage	5.6e-74	63.8
WP_024087077.1\|2512058_2512589_+	hypothetical protein	A0A2H4J881	uncultured_Caudovirales_phage	5.9e-34	48.7
WP_024087078.1\|2512585_2513188_+\|plate	phage baseplate assembly protein V	A0A2H4JG06	uncultured_Caudovirales_phage	7.9e-51	65.7
WP_024087079.1\|2513230_2513500_+	hypothetical protein	NA	NA	NA	NA
WP_024087080.1\|2513502_2513829_+	hypothetical protein	A0A2H4JA09	uncultured_Caudovirales_phage	1.1e-33	64.8
WP_024087081.1\|2513825_2514806_+\|tail	tail fiber protein	Q37840	Escherichia_phage	2.9e-50	38.9
WP_024087082.1\|2514802_2515525_+\|tail	phage tail protein I	V5YTN0	Pseudomonas_phage	8.1e-18	38.1
WP_024087083.1\|2515521_2516208_+\|tail	phage tail protein	A2I2X8	Vibrio_virus	1.5e-18	37.0
WP_024087084.1\|2516210_2516975_+	hypothetical protein	NA	NA	NA	NA
WP_024087085.1\|2516998_2517463_+	hypothetical protein	A0A2H4J924	uncultured_Caudovirales_phage	9.5e-20	54.0
WP_024087086.1\|2517560_2518727_+\|tail	phage tail sheath family protein	A0A2H4J869	uncultured_Caudovirales_phage	2.1e-185	83.9
WP_024087087.1\|2518739_2519249_+\|tail	phage major tail tube protein	Q7M2A5	Pseudomonas_phage	1.6e-60	67.1
WP_024087088.1\|2519294_2519591_+\|tail	phage tail assembly protein	NA	NA	NA	NA
WP_024087089.1\|2519723_2522597_+\|tail	phage tail tape measure protein	A0A2H4JG00	uncultured_Caudovirales_phage	3.0e-63	32.5
WP_024087090.1\|2522606_2523452_+\|tail	phage tail protein	A0A2H4J875	uncultured_Caudovirales_phage	2.0e-76	53.9
WP_010953963.1\|2523426_2523633_+\|tail	phage tail protein	A0A2H4J9Z9	uncultured_Caudovirales_phage	2.5e-17	62.7
WP_024087091.1\|2523690_2524734_+	phage late control protein	A0A2H4JBF6	uncultured_Caudovirales_phage	8.6e-146	73.2
WP_024087092.1\|2524773_2525343_+	glycoside hydrolase family 19 protein	A0A2H4JHX4	uncultured_Caudovirales_phage	1.1e-62	66.0
WP_080676083.1\|2525696_2526053_+	IS66 family insertion sequence element accessory protein TnpB	S5VXZ8	Leptospira_phage	6.3e-16	40.2
WP_024086152.1\|2526071_2527589_+\|transposase	IS66 family transposase	S5VTD3	Leptospira_phage	3.3e-85	36.4
WP_144084428.1\|2528756_2529506_-	hypothetical protein	NA	NA	NA	NA
WP_024087097.1\|2531031_2531823_+	hypothetical protein	NA	NA	NA	NA
WP_044039987.1\|2532388_2532688_-	transcriptional regulator	NA	NA	NA	NA
WP_024087100.1\|2533138_2535565_-	autotransporter outer membrane beta-barrel domain-containing protein	NA	NA	NA	NA
WP_013972552.1\|2535657_2535933_-	peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA
WP_024087101.1\|2536134_2538090_-	acetoacetate--CoA ligase	NA	NA	NA	NA
WP_015270251.1\|2538234_2538714_-\|protease	serine protease inhibitor ecotin	NA	NA	NA	NA
WP_023660865.1\|2538769_2539540_-	3-hydroxybutyrate dehydrogenase	NA	NA	NA	NA
WP_023660864.1\|2539550_2540942_-	GntP family permease	NA	NA	NA	NA
WP_024087102.1\|2541211_2542594_-	AAA domain-containing protein	NA	NA	NA	NA
WP_024087103.1\|2542733_2543750_-	ABC transporter permease	NA	NA	NA	NA
WP_013972559.1\|2543749_2544808_-	microcin C ABC transporter permease YejB	NA	NA	NA	NA
WP_038409628.1\|2544804_2546733_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_003258780.1\|2546744_2547026_-	peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA
WP_013972561.1\|2547106_2548162_-	3-deoxy-7-phosphoheptulonate synthase	A0A1Z1LZD8	Serratia_phage	1.6e-83	47.7
WP_013972562.1\|2548717_2549269_-	YbhB/YbcL family Raf kinase inhibitor-like protein	NA	NA	NA	NA
WP_013972563.1\|2549317_2549626_-	hypothetical protein	NA	NA	NA	NA
WP_023660860.1\|2549772_2550738_-	deoxyribonuclease I	NA	NA	NA	NA
WP_013970357.1\|2550993_2551944_-\|transposase	IS110 family transposase	NA	NA	NA	NA

DBSCAN-SWA_6

2741095 : 2816373

Burkholderia_virus(14.29%)

plate,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013970357.1\|2741095_2742046_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_003260483.1\|2742348_2743260_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_024087170.1\|2743757_2744531_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_024087171.1\|2744596_2746054_-	amidase	NA	NA	NA	NA
WP_013972735.1\|2746050_2747361_-	MFS transporter	Q6JIH2	Burkholderia_virus	1.8e-84	42.2
WP_013972736.1\|2747444_2748620_-	amidohydrolase	NA	NA	NA	NA
WP_023662902.1\|2749248_2749950_-	SMI1/KNR4 family protein	NA	NA	NA	NA
WP_023662905.1\|2752168_2752735_-	hypothetical protein	NA	NA	NA	NA
WP_024087172.1\|2752734_2756949_-	type IV secretion protein Rhs	A0A2H4JFP5	uncultured_Caudovirales_phage	3.6e-33	37.3
WP_003260502.1\|2756955_2757423_-	DUF1795 domain-containing protein	NA	NA	NA	NA
WP_013972739.1\|2757458_2758043_-	hypothetical protein	NA	NA	NA	NA
WP_013972740.1\|2758053_2759910_-	type VI secretion system tip protein VgrG	A0A077K8Q4	Ralstonia_phage	2.4e-66	29.9
WP_024087173.1\|2760622_2762080_+	hypothetical protein	NA	NA	NA	NA
WP_003248391.1\|2762076_2762373_+	hypothetical protein	NA	NA	NA	NA
WP_024087174.1\|2762710_2763013_+	hypothetical protein	NA	NA	NA	NA
WP_023661188.1\|2763103_2763256_+	hypothetical protein	NA	NA	NA	NA
WP_155252251.1\|2763230_2763386_+	hypothetical protein	NA	NA	NA	NA
WP_024087175.1\|2763382_2763646_+	hypothetical protein	NA	NA	NA	NA
WP_044039768.1\|2764681_2765191_+	hypothetical protein	NA	NA	NA	NA
WP_080676051.1\|2765500_2766649_-	ADP-ribosylglycohydrolase	A0A1S6UB21	Serratia_phage	3.5e-55	43.4
WP_024087178.1\|2767405_2768155_+	hypothetical protein	NA	NA	NA	NA
WP_024087179.1\|2768219_2768759_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_013972748.1\|2768773_2770276_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_013972749.1\|2770302_2770785_+\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_013972750.1\|2770784_2772605_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_023661182.1\|2772568_2773639_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_024087180.1\|2773635_2776221_+	type VI secretion system ATPase TssH	A0A223W0B1	Agrobacterium_phage	4.8e-89	30.4
WP_013972753.1\|2776245_2776968_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_013972754.1\|2776964_2778308_+\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_023661181.1\|2778304_2779021_+	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_024087181.1\|2779051_2782855_+	ImcF-like family protein	NA	NA	NA	NA
WP_013972757.1\|2782851_2783760_+	type VI secretion system-associated protein TagF	NA	NA	NA	NA
WP_013972758.1\|2783756_2786252_+	type VI secretion system membrane subunit TssM	NA	NA	NA	NA
WP_013972759.1\|2786395_2786914_+	type VI secretion system tube protein Hcp	NA	NA	NA	NA
WP_013972760.1\|2787009_2788107_+	type VI secretion system protein TssA	NA	NA	NA	NA
WP_024087182.1\|2788261_2790778_+	excinuclease ABC subunit UvrA	A0A1B1IVR3	uncultured_Mediterranean_phage	2.8e-158	35.5
WP_024087183.1\|2790945_2791539_+	hypothetical protein	NA	NA	NA	NA
WP_024087184.1\|2791656_2792532_-	AEC family transporter	NA	NA	NA	NA
WP_023663517.1\|2792856_2794161_+	MFS transporter	NA	NA	NA	NA
WP_013972765.1\|2794268_2795231_-	D-glycerate dehydrogenase	M1NSB9	Streptococcus_phage	4.2e-22	30.0
WP_023663526.1\|2795242_2796535_-	MFS transporter	NA	NA	NA	NA
WP_024087185.1\|2796592_2797543_-	sugar kinase	NA	NA	NA	NA
WP_024087186.1\|2797535_2798324_-	TIM barrel protein	NA	NA	NA	NA
WP_024087187.1\|2798391_2799411_-	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_024087188.1\|2799683_2800928_-	cytochrome c	NA	NA	NA	NA
WP_015270510.1\|2800940_2802725_-	GMC family oxidoreductase	NA	NA	NA	NA
WP_024087189.1\|2802728_2803469_-	gluconate 2-dehydrogenase subunit 3 family protein	NA	NA	NA	NA
WP_024087190.1\|2803869_2804718_+	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_144084458.1\|2805475_2805964_+	hypothetical protein	NA	NA	NA	NA
WP_023662458.1\|2806174_2807503_+	hypothetical protein	NA	NA	NA	NA
WP_013972776.1\|2807535_2809767_+	hypothetical protein	NA	NA	NA	NA
WP_013972777.1\|2809782_2810256_+	curlin	NA	NA	NA	NA
WP_024087192.1\|2810272_2811718_+	curlin	NA	NA	NA	NA
WP_013972779.1\|2811943_2812591_+	DNA oxidative demethylase AlkB	NA	NA	NA	NA
WP_013972780.1\|2812758_2813046_+	hypothetical protein	NA	NA	NA	NA
WP_013972781.1\|2813142_2813757_+	DUF1282 domain-containing protein	NA	NA	NA	NA
WP_024087193.1\|2813776_2814037_-	DUF1652 domain-containing protein	NA	NA	NA	NA
WP_013972783.1\|2814221_2815151_-	DNA-3-methyladenine glycosylase	NA	NA	NA	NA
WP_013970357.1\|2815422_2816373_+\|transposase	IS110 family transposase	NA	NA	NA	NA

DBSCAN-SWA_7

3338958 : 3347652

uncultured_Caudovirales_phage(75.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003251184.1\|3338958_3339630_+	Bax inhibitor-1/YccA family protein	A0A2H4JFM9	uncultured_Caudovirales_phage	2.1e-105	91.0
WP_013973275.1\|3339864_3341244_+	uracil-xanthine permease	H9YQ34	environmental_Halophage	1.6e-27	51.1
WP_013973276.1\|3341428_3341821_+	sulfurtransferase complex subunit TusD	A0A2H4JA39	uncultured_Caudovirales_phage	9.3e-53	79.1
WP_024087386.1\|3341822_3342182_+	sulfurtransferase complex subunit TusC	A0A2H4J8C0	uncultured_Caudovirales_phage	1.6e-35	63.3
WP_013973278.1\|3342181_3342478_+	sulfurtransferase complex subunit TusB	A0A2H4JG28	uncultured_Caudovirales_phage	3.5e-28	63.6
WP_013973279.1\|3342474_3342810_+	TusE/DsrC/DsvC family sulfur relay protein	A0A2H4J8B6	uncultured_Caudovirales_phage	5.7e-43	76.6
WP_013973280.1\|3342806_3343811_+	glycosyl transferase family protein	A0A2H4JBY5	uncultured_Caudovirales_phage	8.3e-154	79.8
WP_013973281.1\|3343903_3344863_+	glutathione S-transferase family protein	NA	NA	NA	NA
WP_013973282.1\|3344979_3346371_-	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA
WP_003258877.1\|3346371_3347652_-\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	2.6e-96	54.4

DBSCAN-SWA_8

5493691 : 5541619

uncultured_Caudovirales_phage(20.0%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_144084463.1\|5493691_5494819_-\|transposase	transposase	NA	NA	NA	NA
WP_085982912.1\|5494843_5495993_+\|transposase	IS3 family transposase	U5P429	Shigella_phage	3.5e-100	65.2
WP_024086516.1\|5496127_5497108_+\|transposase	IS5-like element ISPa26 family transposase	A0A077K814	Ralstonia_phage	3.2e-94	56.7
WP_080676077.1\|5497404_5497743_+	hypothetical protein	NA	NA	NA	NA
WP_013974900.1\|5499062_5500898_-	glutamine--fructose-6-phosphate transaminase (isomerizing)	A7IW18	Paramecium_bursaria_Chlorella_virus	4.7e-131	43.2
WP_013974901.1\|5500901_5501678_-	DeoR family transcriptional regulator	NA	NA	NA	NA
WP_013974902.1\|5501985_5503353_-	UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase	A0A0N7G7I9	Chrysochromulina_ericina_virus	6.4e-32	35.0
WP_003260039.1\|5503474_5503894_-	F0F1 ATP synthase subunit epsilon	NA	NA	NA	NA
WP_013974904.1\|5503937_5505314_-	F0F1 ATP synthase subunit beta	NA	NA	NA	NA
WP_013974905.1\|5505341_5506202_-	F0F1 ATP synthase subunit gamma	NA	NA	NA	NA
WP_024088031.1\|5506250_5507795_-	F0F1 ATP synthase subunit alpha	NA	NA	NA	NA
WP_003260034.1\|5507816_5508353_-	F0F1 ATP synthase subunit delta	NA	NA	NA	NA
WP_003260032.1\|5508365_5508836_-	F0F1 ATP synthase subunit B	NA	NA	NA	NA
WP_003097235.1\|5508892_5509150_-	F0F1 ATP synthase subunit C	NA	NA	NA	NA
WP_003260030.1\|5509294_5510164_-	F0F1 ATP synthase subunit A	NA	NA	NA	NA
WP_008092225.1\|5510180_5510588_-	F0F1 ATP synthase subunit I	NA	NA	NA	NA
WP_003260029.1\|5510737_5511610_-	ParB/RepB/Spo0J family partition protein	I3NLC2	Bifidobacterium_phage	5.5e-13	33.5
WP_012274913.1\|5511619_5512411_-	ParA family protein	Q8JL10	Natrialba_phage	5.0e-21	35.3
WP_024087934.1\|5512429_5513080_-	16S rRNA (guanine(527)-N(7))-methyltransferase RsmG	NA	NA	NA	NA
WP_015268403.1\|5513076_5514969_-\|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	NA	NA	NA	NA
WP_013970244.1\|5515539_5516910_-\|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE	NA	NA	NA	NA
WP_013970245.1\|5516998_5518681_-	membrane protein insertase YidC	NA	NA	NA	NA
WP_080563709.1\|5518683_5518929_-	membrane protein insertion efficiency factor YidD	A0A2H4PQM5	Staphylococcus_phage	3.1e-14	52.2
WP_013970246.1\|5518921_5519326_-	ribonuclease P protein component	NA	NA	NA	NA
WP_003253163.1\|5519339_5519474_-	50S ribosomal protein L34	NA	NA	NA	NA
WP_024087935.1\|5520068_5521607_+	chromosomal replication initiator protein DnaA	NA	NA	NA	NA
WP_003260019.1\|5521647_5522751_+	DNA polymerase III subunit beta	B4UTW9	Rhizobium_phage	1.2e-57	36.8
WP_003260018.1\|5522766_5523870_+	DNA replication/repair protein RecF	NA	NA	NA	NA
WP_013970249.1\|5523874_5526295_+	DNA topoisomerase (ATP-hydrolyzing) subunit B	G3M9Z3	Bacillus_virus	1.4e-114	34.4
WP_079989986.1\|5527043_5528534_+\|transposase	IS21 family transposase	NA	NA	NA	NA
WP_013973271.1\|5528526_5529327_+	ATPase	A0A2L1IVB6	Escherichia_phage	2.2e-32	35.5
WP_010951431.1\|5530377_5530737_+	DNA binding protein	NA	NA	NA	NA
WP_024086416.1\|5531149_5532685_-\|transposase	IS66 family transposase	A0A218MNE7	uncultured_virus	2.3e-118	49.8
WP_133164862.1\|5532748_5533138_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_078464875.1\|5533080_5533401_-	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
WP_010951432.1\|5533774_5534617_+	TIGR04255 family protein	NA	NA	NA	NA
WP_031312598.1\|5534625_5535297_+	transcriptional regulator	NA	NA	NA	NA
WP_011953101.1\|5535920_5536169_+	hypothetical protein	NA	NA	NA	NA
WP_155252252.1\|5536479_5536839_+	hypothetical protein	NA	NA	NA	NA
WP_009684101.1\|5537073_5538561_+	SulP family inorganic anion transporter	A0A2H4J153	uncultured_Caudovirales_phage	2.4e-266	98.4
WP_012316922.1\|5538572_5539424_+	universal stress protein	A0A2H4J154	uncultured_Caudovirales_phage	1.9e-143	92.9
WP_009684099.1\|5539516_5540050_+	NUDIX domain-containing protein	A0A2H4J8B3	uncultured_Caudovirales_phage	2.4e-67	96.2
WP_009684098.1\|5540083_5541619_-\|transposase	IS66 family transposase	A0A218MNE7	uncultured_virus	1.6e-116	45.9

DBSCAN-SWA_9

5831891 : 5892685

Bacillus_phage(28.57%)

protease,holin,bacteriocin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003257436.1\|5831891_5832374_-\|protease	ATP-dependent zinc protease	NA	NA	NA	NA
WP_013970457.1\|5832483_5832885_+	RNA-binding protein S4	NA	NA	NA	NA
WP_023662013.1\|5833014_5833809_-	phosphatase PAP2 family protein	NA	NA	NA	NA
WP_013970459.1\|5833930_5834830_+	Hsp33 family molecular chaperone HslO	NA	NA	NA	NA
WP_013970460.1\|5835009_5836551_+	phosphoenolpyruvate carboxykinase	A0A2H4PQN1	Staphylococcus_phage	6.6e-126	46.9
WP_013970461.1\|5836765_5837206_+	thioesterase	NA	NA	NA	NA
WP_013970462.1\|5837261_5837744_-	hypothetical protein	NA	NA	NA	NA
WP_024087994.1\|5838061_5840407_-	FdhF/YdeP family oxidoreductase	NA	NA	NA	NA
WP_013970464.1\|5840412_5841243_-	formate dehydrogenase accessory sulfurtransferase FdhD	NA	NA	NA	NA
WP_013970465.1\|5841428_5841869_+	peptidoglycan-binding protein LysM	NA	NA	NA	NA
WP_003257447.1\|5841980_5842643_-	GMP/IMP nucleotidase	NA	NA	NA	NA
WP_013970466.1\|5842707_5843274_+	ADP compounds hydrolase NudE	NA	NA	NA	NA
WP_024087995.1\|5843270_5844089_+	3'(2'),5'-bisphosphate nucleotidase CysQ	NA	NA	NA	NA
WP_013970468.1\|5844260_5844716_-	thioesterase	NA	NA	NA	NA
WP_024087996.1\|5844715_5846122_-	sigma-54-dependent Fis family transcriptional regulator	W8CYM9	Bacillus_phage	3.9e-08	28.7
WP_024087997.1\|5846118_5847933_-	sensor histidine kinase	NA	NA	NA	NA
WP_013970471.1\|5847975_5848521_-	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A291LA62	Escherichia_phage	4.6e-50	53.9
WP_013970472.1\|5848800_5849907_+	agmatine deiminase	M1I1E2	Acanthocystis_turfacea_Chlorella_virus	4.3e-103	50.6
WP_013970473.1\|5850421_5852500_-	TonB-dependent siderophore receptor	NA	NA	NA	NA
WP_013970474.1\|5853005_5854325_+	OprD family porin	NA	NA	NA	NA
WP_013970475.1\|5854442_5856110_-	FMN-binding glutamate synthase family protein	NA	NA	NA	NA
WP_013970476.1\|5856225_5857614_-	HAMP domain-containing protein	NA	NA	NA	NA
WP_023661060.1\|5857615_5858335_-	response regulator	W8CYM9	Bacillus_phage	1.1e-30	34.1
WP_023661061.1\|5858475_5860773_+	TonB-dependent siderophore receptor	NA	NA	NA	NA
WP_013970481.1\|5861248_5861455_-	DUF3079 domain-containing protein	NA	NA	NA	NA
WP_003257464.1\|5861781_5862030_-	hypothetical protein	NA	NA	NA	NA
WP_013970482.1\|5862593_5862869_+	DUF3077 domain-containing protein	NA	NA	NA	NA
WP_024087998.1\|5863222_5864428_-	methyltransferase	NA	NA	NA	NA
WP_013970484.1\|5864552_5865242_-	ABC transporter permease	NA	NA	NA	NA
WP_013970485.1\|5865241_5865934_-	ABC transporter permease	NA	NA	NA	NA
WP_013970486.1\|5865988_5866741_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_003257472.1\|5866752_5867526_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	8.4e-21	32.0
WP_013970487.1\|5868191_5869577_+	GABA permease	NA	NA	NA	NA
WP_013970488.1\|5869758_5870202_-	hypothetical protein	NA	NA	NA	NA
WP_024087999.1\|5870259_5871240_-	polyphosphate kinase 2	NA	NA	NA	NA
WP_003257478.1\|5871613_5871886_-	oxidative damage protection protein	NA	NA	NA	NA
WP_013970490.1\|5871882_5872950_-	A/G-specific adenine glycosylase	NA	NA	NA	NA
WP_023661917.1\|5872946_5875193_-	AsmA family protein	NA	NA	NA	NA
WP_024088000.1\|5875498_5877160_+	OFA family MFS transporter	NA	NA	NA	NA
WP_003255736.1\|5877398_5877992_+	imidazoleglycerol-phosphate dehydratase HisB	NA	NA	NA	NA
WP_013970493.1\|5877992_5878631_+	imidazole glycerol phosphate synthase subunit HisH	NA	NA	NA	NA
WP_003257483.1\|5878631_5878892_+	DUF2164 domain-containing protein	NA	NA	NA	NA
WP_003257484.1\|5878919_5879657_+	1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase	NA	NA	NA	NA
WP_013970495.1\|5879667_5880438_+	imidazole glycerol phosphate synthase subunit HisF	NA	NA	NA	NA
WP_003257485.1\|5880555_5881734_-\|holin	choline ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.9e-24	36.2
WP_013970496.1\|5881730_5882576_-\|holin	choline ABC transporter permease subunit	NA	NA	NA	NA
WP_003257486.1\|5882660_5883608_-\|holin	choline ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_013970497.1\|5884061_5885438_+	L-serine ammonia-lyase	NA	NA	NA	NA
WP_015268639.1\|5885895_5887002_+	GlxA family transcriptional regulator	NA	NA	NA	NA
WP_003257487.1\|5887121_5887379_-	hypothetical protein	NA	NA	NA	NA
WP_013970499.1\|5887799_5888276_-	4-hydroxybenzoyl-CoA thioesterase	NA	NA	NA	NA
WP_013970500.1\|5888286_5889252_-	L-carnitine dehydrogenase	NA	NA	NA	NA
WP_024088001.1\|5889270_5890155_-	3-keto-5-aminohexanoate cleavage protein	NA	NA	NA	NA
WP_013970502.1\|5890276_5891221_-\|holin	choline ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_024088002.1\|5891368_5892313_+	GlxA family transcriptional regulator	NA	NA	NA	NA
WP_024088003.1\|5892433_5892685_-\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NC_023076

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection