CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP006580	Enterobacter ludwigii strain P101 chromosome, complete genome	2 crisprs	WYL,csa3,DinG,DEDDh,cas3,RT	0	3	10	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP006580_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP006580_1

1698944-1699144

Orphan

Consensus_repeat	Method
TGGTTCTGCCGGTGATGGACCTG	CRISPRCasFinder

3 spacers

The CRISPR arrays of NZ_CP006580_1

>merge|NZ_CP006580|1|1698944-1699144|CRISPRCasFinder
TTGTTCTGGCGGTGTCAGTCGTGCGCGGCCTGCTTCAGGATCCGGATAATAGTACCGGCGCAGTGGTGGGTGGTTCTGCCGGTGATGGACCTGGTGCGGCAGGTGACGGTTCTGCCGGCGACGGTACTGGTGCAGATGGTGATGGTTCTGCCGGTGATGGATCTGCCGCAACTGGTGATGGTTCTGCCGGTGATGACGCTG

>NZ_CP006580|1|1|1698944-1699144|CRISPRCasFinder
TTGTTCTGGCGGTGTCAGTCGTG	CGCGGCCTGCTTCAGGATCCGGATAATAGTACCGGCGCAGTGGTGGG
TGGTTCTGCCGGTGATGGACCTG	GTGCGGCAGGTGACGGTTCTGCCGGCGACGGTAC
TGGTGCAGATGGTGATGGTTCTG	CCGGTGATGGATCTGCCGCAACTGGTGA
TGGTTCTGCCGGTGATGACGCTG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP006580.1\|WP_025203542.1\|1695799_1696660_+\|S49-family-peptidase	unknown	unknown	gnl\|CDD\|132933
NZ_CP006580.1\|WP_025203555.1\|1706105_1707179_+\|tail-protein	unknown	unknown	gnl\|CDD\|226814
NZ_CP006580.1\|WP_025203549.1\|1700142_1700361_+\|DUF2635-domain-containing-protein	unknown	unknown	gnl\|CDD\|378516
NZ_CP006580.1\|WP_131631874.1\|1707175_1707805_+\|phage-baseplate-assembly-protein	unknown	unknown	gnl\|CDD\|226819
NZ_CP006580.1\|WP_025203548.1\|1699552_1700140_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006580.1\|WP_025203538.1\|1691213_1691807_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006580.1\|WP_025203547.1\|1699214_1699556_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006580.1\|WP_025203545.1\|1697748_1698807_+\|major-capsid-protein	unknown	unknown	gnl\|CDD\|377147
NZ_CP006580.1\|WP_025203536.1\|1689722_1690382_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006580.1\|WP_025203554.1\|1704738_1706109_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226681
NZ_CP006580.1\|WP_049866877.1\|1702230_1702563_+\|phage-tail-assembly-protein	unknown	unknown	gnl\|CDD\|378397
NZ_CP006580.1\|WP_025203541.1\|1694129_1695803_+\|phage-portal-protein	unknown	unknown	gnl\|CDD\|377468
NZ_CP006580.1\|WP_042866847.1\|1696697_1697261_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|368199
NZ_CP006580.1\|WP_025203537.1\|1690632_1690920_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006580.1\|WP_080271899.1\|1693897_1694128_+\|phage-head-tail-adapter-protein	unknown	unknown	gnl\|CDD\|376942
NZ_CP006580.1\|WP_025203553.1\|1702668_1704669_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|222880
NZ_CP006580.1\|WP_049866876.1\|1691748_1693863_+\|terminase	unknown	unknown	gnl\|CDD\|368649
NZ_CP006580.1\|WP_042866310.1\|1697263_1697668_+\|head-decoration-protein	unknown	unknown	gnl\|CDD\|376964
NZ_CP006580.1\|WP_025203551.1\|1701860_1702229_+\|phage-tail-protein	unknown	unknown	gnl\|CDD\|378457
NZ_CP006580.1\|WP_025203550.1\|1700357_1701851_+\|tail-protein	unknown	unknown	gnl\|CDD\|226821

Protein	Function_ID	Function_description	E-value
NZ_CP006580.1\|WP_025203542.1\|1695799_1696660_+\|S49-family-peptidase	gnl\|CDD\|132933	cd07022, S49_Sppa_36K_type, Signal peptide peptidase A (SppA) 36K type, a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV) 36K type: SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Members in this subfamily are all bacterial and include sohB peptidase and protein C. These are sometimes referred to as 36K type since they contain only one domain, unlike E. coli SppA that also contains an amino-terminal domain. Site-directed mutagenesis and sequence analysis have shown these SppAs to be serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad and not the usual Ser-His-Asp catalytic triad found in the majority of serine proteases.	2.50836e-100
NZ_CP006580.1\|WP_025203555.1\|1706105_1707179_+\|tail-protein	gnl\|CDD\|226814	COG4379, COG4379, Mu-like prophage tail protein gpP [General function prediction only].	2.91431e-107
NZ_CP006580.1\|WP_131631874.1\|1707175_1707805_+\|phage-baseplate-assembly-protein	gnl\|CDD\|226819	COG4384, COG4384, Mu-like prophage protein gp45 [Function unknown].	6.70326e-49
NZ_CP006580.1\|WP_025203549.1\|1700142_1700361_+\|DUF2635-domain-containing-protein	gnl\|CDD\|378516	pfam10948, DUF2635, Protein of unknown function (DUF2635). This is a family of phage proteins with unknown function.	7.91781e-13
NZ_CP006580.1\|WP_025203545.1\|1697748_1698807_+\|major-capsid-protein	gnl\|CDD\|377147	pfam03864, Phage_cap_E, Phage major capsid protein E. Major capsid protein E is involved with the stabilisation of the condensed form of the DNA molecule in phage heads.	1.70203e-55
NZ_CP006580.1\|WP_025203554.1\|1704738_1706109_+\|hypothetical-protein	gnl\|CDD\|226681	COG4228, COG4228, Mu-like prophage DNA circulation protein [General function prediction only].	2.58756e-62
NZ_CP006580.1\|WP_025203541.1\|1694129_1695803_+\|phage-portal-protein	gnl\|CDD\|377468	pfam05136, Phage_portal_2, Phage portal protein, lambda family. This protein forms a hole, or portal, that enables DNA passage during packaging and ejection. It also forms the junction between the phage capsid and the tail proteins.	1.48188e-104
NZ_CP006580.1\|WP_042866847.1\|1696697_1697261_+\|hypothetical-protein	gnl\|CDD\|368199	pfam04931, DNA_pol_phi, DNA polymerase phi. This family includes the fifth essential DNA polymerase in yeast EC:2.7.7.7. Pol5p is localized exclusively to the nucleolus and binds near or at the enhancer region of rRNA-encoding DNA repeating units.	0.00160229
NZ_CP006580.1\|WP_080271899.1\|1693897_1694128_+\|phage-head-tail-adapter-protein	gnl\|CDD\|376942	pfam02831, gpW, gpW. gpW is a 68 residue protein known to be present in phage particles. Extracts of phage-infected cells lacking gpW contain DNA-filled heads, and active tails, but no infectious virions. gpW is required for the addition of gpFII to the head, which is, in turn, required for the attachment of tails. Since gpFII and tails are known to be attached at the connector, gpW is also likely to assemble at this site. The addition of gpW to filled heads increases the DNase resistance of the packaged DNA, suggesting that gpW either forms a plug at the connector to prevent ejection of the DNA, or binds directly to the DNA. The large number of positively charged residues in gpW (its calculated pI is 10.8) is consistent with a role in DNA interaction.	2.78599e-08
NZ_CP006580.1\|WP_025203553.1\|1702668_1704669_+\|hypothetical-protein	gnl\|CDD\|222880	PHA02564, V, virion protein; Provisional.	1.81959e-18
NZ_CP006580.1\|WP_049866876.1\|1691748_1693863_+\|terminase	gnl\|CDD\|368649	pfam05876, Terminase_GpA, Phage terminase large subunit (GpA). This family consists of several phage terminase large subunit proteins as well as related sequences from several bacterial species. The DNA packaging enzyme of bacteriophage lambda, terminase, is a heteromultimer composed of a small subunit, gpNu1, and a large subunit, gpA, products of the Nu1 and A genes, respectively. Terminase is involved in the site-specific binding and cutting of the DNA in the initial stages of packaging. It is now known that gpA is actively involved in late stages of packaging, including DNA translocation, and that this enzyme contains separate functional domains for its early and late packaging activities.	2.07143e-157
NZ_CP006580.1\|WP_042866310.1\|1697263_1697668_+\|head-decoration-protein	gnl\|CDD\|376964	pfam02924, HDPD, Bacteriophage lambda head decoration protein D.	1.61258e-16
NZ_CP006580.1\|WP_025203551.1\|1701860_1702229_+\|phage-tail-protein	gnl\|CDD\|378457	pfam10618, Tail_tube, Phage tail tube protein. This bacterial family of proteins contains phage tail tube proteins related to the Mu phage tail tube protein M. Bacteriophage Mu has an eicosahedral head and contractile tail. The tail is composed of an outer sheath and an inner tube.	8.32148e-36
NZ_CP006580.1\|WP_025203550.1\|1700357_1701851_+\|tail-protein	gnl\|CDD\|226821	COG4386, COG4386, Mu-like prophage tail sheath protein gpL [General function prediction only].	2.83775e-171
NZ_CP006580.1\|WP_049866877.1\|1702230_1702563_+\|phage-tail-assembly-protein	gnl\|CDD\|378397	pfam10109, Phage_TAC_7, Phage tail assembly chaperone proteins, E, or 41 or 14. This is family of various Myoviridae bacteriophage tail assembly chaperone, or TAC, proteins.	1.05393e-08

>NZ_CP006580.1|WP_025203545.1|1697748_1698807_+|major-capsid-protein
MDHQFNIYDTMTLVEVVPNLMTSQNFLLDKFFPNVIESDTEFVAIDVDVGRRRMAPFCSPLVAGKLVESRRYQTNIFKPPYIKDKRVPDLRKPIRRQIGEQIGGNIPASDKAALNMMLEMGDQVDVLNRRQEWMAANAMMTGTITVVGEGLDPEVIDFQRDPALTIALSGGDKWPQAVAAGATNNKPTQDIERWQTMILQKSGAVATDLIFTNASWNAFRLDTTVKDNAITFPAMSPYGNQVDAGARVELGAVYKGRWGQFDLWLYNDWFIDPVDDVEKPMVTDGAVIMSGPNLMGTRAYGAILDPDFDYGALAYAPKTWTEKDPAQRFLLMQSAPLVIPSRVNAALCATVV
>NZ_CP006580.1|WP_042866310.1|1697263_1697668_+|head-decoration-protein
MVEVIGDNPCTPRMQSYTYVPDQLIAGNLQLVTDTVDIGGADPLVRGSILGQITATGVYVLSVQTATDGSEVPSAVLVDNVNPGGATVRGGIYELGIFNQNRITFDSSWTLPALKTALRPFSIFLRDSLQAPAS
>NZ_CP006580.1|WP_042866847.1|1696697_1697261_+|hypothetical-protein
MEEDNQDDPELEDDKQPQGKTRGRRVDDNPDDPDNDPDAGDDPEDPGSPDKQGRKAKKAKAKSRRVDDDPDADGDDDDGDDHVDDPDDKQARMDERTRCARIFGSPHAADNTALAASLAFNTGMSSAAAIQVMANTNPQVSAPAARRINLDERMRAENLPKLKQDTRQQGGLNTLISQYQKLSGRGK
>NZ_CP006580.1|WP_025203542.1|1695799_1696660_+|S49-family-peptidase
MNLPHLAQRVFNTPLMLHPLKAEIVMTALMERFGIARVSAGAWSDEDEKPFRRKGKEAGYDVLEGIAVIPVHGTLVQKLGSLRPYSGMTGYDGIRQSFLNALHDPEVTAICLDVDSPGGEVGGCFDLVDLIYACRGKKPIHAILTESAYSAAYAIASAADRIVVPRTGGVGSIGCIVIHCDWSQRIEKEGLQVSIITFGDRKAETNSLRPLSDQARAGIQAEVDAAGVLFVDTVARNRGLAASVVRNTQAACLLAEEGVRLGFADAVLSPDDAFYELLTTTGVSHV
>NZ_CP006580.1|WP_025203541.1|1694129_1695803_+|phage-portal-protein
MTKITLLGPDGHPLPPKALPPSGRSRTSALVGNRGIAYDAADVNSDQLANWRPSLWSPDNEINPYRDRIVSRTRDLVRNDGWGAGIITRTQDNVIGPSFRPVLSPDYRALAHISGNSAFDIGWAKEYKRAVEAAWRSWVSDPGRWCDVERQLTVSQQLRLAFRHKLVDGDALGYLQYRPDRLGYGKAKFATTLQIIDPDRLSNPQQMMDLKYMRGGVEIDDDGAPVYYHIREAHMGDWWSAPETVIWQRIPRETRWGRPVIVHDFDHDRGAQHRGVGILTPIVQRMKMLTKYDQSELEAAVLNAVFGAYLKSPFDPGVAAEAMGDTAADVANAEGWSSYQDARGDYYSDNRLMMNHGVGIMKLWPSEEIGTVDAARPNSNFADFENAMLRNLAAATGLSAQQISQDWSEVNYSSARAAMLEAWKTLNRRREDFGSGFAQPVLVAFMEELHEFSDLPLPRNAPDFAEARAAYSRARWMGPGRGWVDPVAEKKGVILGLDAGISTMEQEVAESMGADWEEVVDQRSFEINYFKEKGMPPPSWAQANVMAPDTIKDPEEE
>NZ_CP006580.1|WP_080271899.1|1693897_1694128_+|phage-head-tail-adapter-protein
MTPDQLRAALTAAQSAYTDLMTGQMGVSFSYAQGDGTRSVTYKPASLDNLNQFIRQLQQALGICPCPRSRYQRFRY
>NZ_CP006580.1|WP_049866876.1|1691748_1693863_+|terminase
MSTNTLPASESLSLTLRKTDRLAVSVRKGWTPPPRISVPDWADKYRKLAKESGSTSGSWETATVEIARGPMLAATESGVHIITVMCCTQLMKTALLENLFGYFAHLDPCPILLLQPKEAAAEQFSKERITPMLRVTPVLRKLVGGNKQKNSKETLLYKSFTGGFLALAGAGSPDNLARRPVRVILADEVDKYPVTREGDPIALAEERTATFGLNWLSIRACSPTVEDESRIADSYADSDQRRASVECPHCTHRQFPDFFKHVHWTKDDDGRHRPETARLHCESCGVAWSEGDRLRSLKTIRWHQTRTFECCGVRQSPLMEYENVWRDDDGTAVDQVWSWSADDRHAVYRARCRCCGALPVSNVHAGFQASKLFSPWQKDKPSDIAGKYLKAKGDPDKEQAWWNTQMGLPHRPVHGKAVQLDVLLARREVYGAEVPDGVAVLTAGIDTQDNRLEIEVVGWGRDEESWSIAYDVIEGDLETPEPWERLDAYLQQIWRRADGRGFVIKAACHDSGGSHSQKVYDFAKARLARRIWAIKGESARNGKRSPVWPNKQPTSRSKKSYRPVILGVNSAKDSVRGRLHIETPGPGYMHYPSDRDMGWFEQLLSERLVVKEISGHRFTVWELPGGKANEGLDCRVYAYAALHGLMHIGFKLNATAESVIANPENLLPPPAAPEEKHSLRLPGAELPVTPEKTKKLPLHKRLAR
>NZ_CP006580.1|WP_025203538.1|1691213_1691807_+|hypothetical-protein
MNQADFARLHGVSRKTITMWKSRGWVIFSGDDIDADASNALIEKYRKTVNHPKSKKTGTPGKKGKTGPVSSLPLATVSGLDPEASLSDIAEKFIQENGAELSLDEARRVKENYLALLTKLEFQQKDGQLIELEQAEKVLFDCFRAQRDSWLNWPARVAPLMAADLDVPADRMTEVLAEHVHKHITSLGEPEFNAAED
>NZ_CP006580.1|WP_025203537.1|1690632_1690920_+|hypothetical-protein
MITINRNGIKTVFERYGDGRVIVSSEYEIPGDETVTPVVKFSEVIMMTAAIPRQFLNENGRSNFNLAKAFLRCHRASHVEAINSALSRHGYPPAG
>NZ_CP006580.1|WP_025203536.1|1689722_1690382_+|hypothetical-protein
MANLQDLRNTLSGIRKQIPFATAQALTSVARQIEQGEKKGMQRQLQNPTPFTVNAVRSTAARKTNLMAKVFVMDTAASYLDPFEFGGLHKLNGNALLNPKNVRLNKFGNLARNKMTQLKARPDVFIGTVTTKYGQKVNGVWQRKKALKGKKGKKRLKRSPNGTRRERQKQRPPKLLIRFGNALEVKEHLNYFDRANKMAEALMPSALSQAMAEALRTAK
>NZ_CP006580.1|WP_025203547.1|1699214_1699556_+|hypothetical-protein
MGPVDWDKKLLAPLQGVFGESVEYRPRHGTPFTITGIFDRAYTVDIEPIDDNGPTVNTTRPVLGVRDSAFSSPPEQGDMLYIPRVKTLFKVADVQPDSHGGSRLELNRVKVTQ
>NZ_CP006580.1|WP_025203548.1|1699552_1700140_+|hypothetical-protein
MNSALLREMAVIALRGNTLAEHRVYSPRDWATREDSYPLILVQTVHEQKFSRGRNSPQFDTVTTLQIAARLEEFDGEQFDDGAMKAQLNLERVKEEIERAVINSYEITRRIQQFKHVRSQLSLTPEGEGHFGQLIIEMDIEYFQGPDDFYPIGGDELEELYLEIAMPDGTTRPGLDITFPPQPPAQPTPDPEPGE
>NZ_CP006580.1|WP_025203549.1|1700142_1700361_+|DUF2635-domain-containing-protein
MFVKPAPGRMIRHPDKGTFLPENGAEVPDNAIFWRNRLRDGDVIRAGKSKPSASTGKQSGKSAGEPGKEPDA
>NZ_CP006580.1|WP_025203550.1|1700357_1701851_+|tail-protein
MSGEIDSNILTPLFWATIDNSQANSAQAVQRTLLIGQMLSAGSAAASIAVPCGSAQMAIELAGAGSMLAEMARVYMDNDTAGDVYLLPLADGANDAAATGSIAISAVPTANGVLSLYIAGTRVPVTLITTDTVEVIGTDIAAAINAMTSLPVTAESAVASGTATVTLTAKNKGDIGNTIDLRLNYQGTAGGEQTPAGLGIALTAMSGGAGTPDMTDGLASLKDKAFDFIVLPYSDTTSLDTLKLFMNDNTGRWSYQKQIYGHVFATGTGTYGQLTATGEARNNQHESLMGVYDSPSPAYLWSAAYTGAVAGSLRTDPGRPVQTLPVYSVLAPPVISRFDQPERNNLLHSGIASYTVQDDGTVQIENLITTYQKNAYGAPDNSYLEVETLFTLMYVTRDLKTLITSKFGRMKLVDDGTRFRAGAPMVTPKIIKGELLSRYTQLEFDGYVQDSNAFAAGLQVTKSKVNPNRVDVLWDGILVNQLRIVALINQFRLQPAA
>NZ_CP006580.1|WP_025203551.1|1701860_1702229_+|phage-tail-protein
MSDNLLAGTAYVSVDGTTIMVGGQFKYATGRVKRESLIGMDGIHGYKETFVTPYISCQVRDAGNTVLSDYNDMTNVTLVVELANGKTLTGAGMWTTDAQEVDSEEALFTVKWEGMTGSVKES
>NZ_CP006580.1|WP_049866877.1|1702230_1702563_+|phage-tail-assembly-protein
MTDIYELPDKETITLSQPVSVGKGLMEYHEIILKEPTLDEVDNFYQEREKHKSALAGMGLLISLVSGVPRPAVRKLSYRDYKRCEVWLTRFLTWEPPEEDETSSDDSVQI
>NZ_CP006580.1|WP_025203553.1|1702668_1704669_+|hypothetical-protein
MAANRFDFELVAKDEASATIKELDDTIAKMLPNLDKAGKKIQMGGRKSTEGLDDLNARLDKMGALAKNSVQYFGDMVPPMRLVSELSGKYGGAIAKIGLGGAVAYGAGQAIASVAGSMKDAAEDAYKLSVQAKDAGMSVHDLTQVAGSMRILGSDTDKARASVESLSRTLTDSMNDRNSTVTGVLNQIGVSIVKKDDHTADTMATLEKLAEVFPTIGAQKQRTVADTLGLTPEMLALLREGVHYKDLLAKSDKLGLTVSDDTVQKLSGLNDALNEISASWEGLKNRTKNGLADKLMSDFTVGGHKILKSGVKDGLEGISDLFQHGDLTGLSHALGFISTADAEKLRRIQGDKKLYNSLSRRERGAVDAGFMTDAVRKRYDERYRATDEASQLQQDMNIVTHQGNSGAPPVNNTLFDQPRNNALGLRNHNPVNLRSASNETGKVFAGKSGTFSRFGSDEDGLAAASRQLFLYGDRGKHSLQDVIKTFAPSSENNVDAYIQDVARDSGFKPGENIDLHSPDVLKRLLPAMIKHEQGTQPFSQKDIDTGIHDAIFDPRWSGKRDPDYLMAQRNQPFGYGADDATADPRRREESVPDYLQARRSQAQTNEQTGIITPDQTAELTKALREIVAQAGKDGKTQLEVTLTGTSGEQKRVLVPFGARVTTSMSS
>NZ_CP006580.1|WP_025203554.1|1704738_1706109_+|hypothetical-protein
MTLIHDAAAAASDALFGPSGDSWKWSEHLHKASFRGVPFAVEGGDGSYGRRQAVHQYPYRDQAWVEDIGRSTRKFTLRGFLVQSSRLYTAPDVMTQRDSLIAACETGSAGTLVHPTLGELTVSVPDGGLKISDTLAGNVFPFTLTVIESGLRVFAITSSADAASTVQTSWLSVAAEAAGSFIGEIHGTLNWFSGTMKTLHNTADFWARSVTSTLHSASNLGNSLHNTFSRDTSGRYYHGPYSGTSPSGVVQATLAATTQNTRAVEASLGSLLQDTTPETYASDTLNVINNLQQAITSPADCVNTMQTLSGFTDPQWHPPGGGAVVSGIAVRFFTVLSAGAMADAAAHVPLRSYDDAIALLDAVSDTLDSAMLSAGDNGEDRLYEALMVLRSQTVSLLRDRGASLAPLVQQRFGASLPALYLASRLYQDAGRSDSLTDMVDPVHPAFMPHTFKALSE
>NZ_CP006580.1|WP_025203555.1|1706105_1707179_+|tail-protein
MSDELTLEVSGREISGWDQVRVTRSTEHLPSDFSLSLMDYYPGSGEKQLVTPGEACVVRLGNDPVVTGYIDRWSSAIGPSRHEVHASGRGKCQDLVDCSAIWPNNVIENATPLQIAQKLAAPYGIRVGTDVTDLQNVPQFSLNWGESSQEVIDRMMRWAALLYYDLPDGSLFLTRVSTRKAASGVAVGQNIQAAWYDSSCDGRYSDYTGISMPTTAVTEISPGDGYASVTLATAADPEMAAMRYRNLVTLIESTLNTYGAAQQYINWEMNRRFGRSRVLHVTVDSWRDTDGKLWEPNTLIPVTAPQLNLDNDAWLLGEITFQKDERGTTAEMVLMPPQAFMVEPYQFYSNIMELNYK
>NZ_CP006580.1|WP_131631874.1|1707175_1707805_+|phage-baseplate-assembly-protein
MREPIYLTLLKKLGELEGRVRVLYRKSMMAFTTGKVTAMNDAGGVQALQYQHPVEVRGSTPRMAEFGFSSGLPEGTEVLIACIGGDRSSGIVIATNNSAYRHSGLTPGETVIYNQWGQFVKLTESGIEVQANGQAVDVKQATQVTIEATAGVMMKTPLLQCTGDIQDNCEGNTTTLKSLREAYIRHDHDLEGVQSGSSTKTTDPTGDKP

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Crispr_ID: NZ_CP006580_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP006580_2

2609949-2610131

Unclear

Consensus_repeat	Method
CGGCTCTTAAGCCGAATGGAAACGGC	CRISPRCasFinder

3 spacers

DEDDh

The CRISPR arrays of NZ_CP006580_2

>merge|NZ_CP006580|2|2609949-2610131|CRISPRCasFinder
CGGCTCTTAAGCCGAATGGAAACGGCGTAATCGCCGAATCGGAAGAACCCGCGCAAACAGTGGATTCGGCTTTTAAGCCGAATGGAAACGGCTCTCAGGCCGAATGCAAACGGCTCTTAAGCCGAATGGAAACGGCCCATGAGCCGAATCCTGGAAACGGCTCTCAAGCCGAATCTATTCTCT

>NZ_CP006580|2|2|2609949-2610131|CRISPRCasFinder
CGGCTCTTAAGCCGAATGGAAACGGC	GTAATCGCCGAATCGGAAGAACCCGCGCAAACAGTGGATT
CGGCTTTTAAGCCGAATGGAAACGGC	TCTCAGGCCGAATGCAAA
CGGCTCTTAAGCCGAATGGAAACGGC	CCATGAGCCGAATCCTGGAAA
CGGCTCTCAAGCCGAATCTATTCTCT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP006580.1\|WP_025204049.1\|2610650_2610932_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006580.1\|WP_158407510.1\|2604740_2604914_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006580.1\|WP_025204041.1\|2605541_2605745_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006580.1\|WP_131631880.1\|2614845_2615046_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006580.1\|WP_025204037.1\|2604097_2604763_-\|exodeoxyribonuclease-X	DEDDh	cd06127_DEDDh_CAS-I	gnl\|CDD\|181186
NZ_CP006580.1\|WP_025204055.1\|2612801_2613065_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006580.1\|WP_025204054.1\|2612442_2612799_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006580.1\|WP_025204047.1\|2609228_2609474_+\|DUF4222-domain-containing-protein	unknown	unknown	gnl\|CDD\|372855
NZ_CP006580.1\|WP_025204057.1\|2613551_2613908_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006580.1\|WP_025204051.1\|2611132_2611924_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274755
NZ_CP006580.1\|WP_131631879.1\|2605218_2605410_-\|DUF1482-family-protein	unknown	unknown	gnl\|CDD\|369331
NZ_CP006580.1\|WP_025204058.1\|2613897_2614290_+\|class-I-tRNA-ligase-family-protein	unknown	unknown	gnl\|CDD\|273058
NZ_CP006580.1\|WP_025204052.1\|2611920_2612169_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006580.1\|WP_025204050.1\|2610918_2611140_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006580.1\|WP_025204044.1\|2608019_2608403_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|238045
NZ_CP006580.1\|WP_025204043.1\|2607102_2607783_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006580.1\|WP_042866419.1\|2612149_2612446_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006580.1\|WP_025204046.1\|2608750_2609215_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|368819
NZ_CP006580.1\|WP_025204045.1\|2608508_2608751_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_CP006580.1\|WP_025204042.1\|2606800_2607085_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP006580.1\|WP_025204037.1\|2604097_2604763_-\|exodeoxyribonuclease-X	gnl\|CDD\|181186	PRK07983, PRK07983, exodeoxyribonuclease X; Provisional.	2.11422e-116
NZ_CP006580.1\|WP_025204051.1\|2611132_2611924_+\|hypothetical-protein	gnl\|CDD\|274755	TIGR03734, PRTRC_parB, PRTRC system ParB family protein. A novel genetic system characterized by six major proteins, included a ParB homolog and a ThiF homolog, is designated PRTRC, or ParB-Related,ThiF-Related Cassette. It is often found on plasmids. This protein family the member related to ParB, and is designated PRTRC system ParB family protein.	2.30195e-09
NZ_CP006580.1\|WP_025204044.1\|2608019_2608403_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	4.79474e-16
NZ_CP006580.1\|WP_025204058.1\|2613897_2614290_+\|class-I-tRNA-ligase-family-protein	gnl\|CDD\|273058	TIGR00398, Methionine--tRNA_ligase, methionine--tRNA ligase. The methionyl-tRNA synthetase (metG) is a class I amino acyl-tRNA ligase. This model appears to recognize the methionyl-tRNA synthetase of every species, including eukaryotic cytosolic and mitochondrial forms. The UPGMA difference tree calculated after search and alignment according to this model shows an unusual deep split between two families of MetG. One family contains forms from the Archaea, yeast cytosol, spirochetes, and E. coli, among others. The other family includes forms from yeast mitochondrion, Synechocystis sp., Bacillus subtilis, the Mycoplasmas, Aquifex aeolicus, and Helicobacter pylori. The E. coli enzyme is homodimeric, although monomeric forms can be prepared that are fully active. Activity of this enzyme in bacteria includes aminoacylation of fMet-tRNA with Met; subsequent formylation of the Met to fMet is catalyzed by a separate enzyme. Note that the protein from Aquifex aeolicus is split into an alpha (large) and beta (small) subunit; this model does not include the C-terminal region corresponding to the beta chain. [Protein synthesis, tRNA aminoacylation].	0.000194087
NZ_CP006580.1\|WP_025204047.1\|2609228_2609474_+\|DUF4222-domain-containing-protein	gnl\|CDD\|372855	pfam13973, DUF4222, Domain of unknown function (DUF4222). This short protein is likely to be of phage origin. For example it is found in the Enterobacteria phage YYZ-2008. It is largely found in enteric bacteria. The molecular function of this protein is unknown.	3.59682e-09
NZ_CP006580.1\|WP_025204046.1\|2608750_2609215_+\|hypothetical-protein	gnl\|CDD\|368819	pfam06254, YdaT_toxin, Putative bacterial toxin ydaT. YdaT_toxin is a family of putative bacterial toxins that are neutralized by the putative antitoxin YdaS, UniProtKB:P76063, family pfam144549.	2.80187e-07
NZ_CP006580.1\|WP_025204045.1\|2608508_2608751_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	1.72025e-12
NZ_CP006580.1\|WP_131631879.1\|2605218_2605410_-\|DUF1482-family-protein	gnl\|CDD\|369331	pfam07358, DUF1482, Protein of unknown function (DUF1482). This family consists of several Enterobacterial proteins of around 60 residues in length. The function of this family is unknown.	4.20628e-11

>NZ_CP006580.1|WP_025204047.1|2609228_2609474_+|DUF4222-domain-containing-protein
MRSDQEIIERARAVLQRNTANAPAERRAEILPGRKYRAHRGGMVTLINRSQTRVTYLREGYSEICEISCREFDRKFSEVQS
>NZ_CP006580.1|WP_025204046.1|2608750_2609215_+|hypothetical-protein
MEINYTQILPLLIAWADGADPDSRIRGRESVGDEITRAAARLGIAGGLESPDTVRALHNNQQRIFRWAAAETAAQQRKIAALYPAIIDALPEGLSAQLLASDSLQYRALQVAERSVKTAMKEFVRANKAIAIQELLAERRNEGAGSLPESCMYH
>NZ_CP006580.1|WP_025204045.1|2608508_2608751_+|helix-turn-helix-transcriptional-regulator
MNNISKERVALKLTQEALANRLGWRQSRLSNYENGIRKPGLGDCRRIVEALNLFGGDCTLDSIFPPVVRQNTNSVEKGAD
>NZ_CP006580.1|WP_025204044.1|2608019_2608403_-|helix-turn-helix-domain-containing-protein
MNMNQQIASRLKAAREKKGISQKMLADRCGWAQSRIGNYESGARTIGLDDAVALADALGVSPVELVFGSESGNLRKLNDQQIQLLDLYNQLPDKEQENMLLAFSRRLKDLDEWVDKYIQHRDKSKDI
>NZ_CP006580.1|WP_025204043.1|2607102_2607783_-|hypothetical-protein
MTNAIKQIFDTDGEPMMEVVVNSDCSAVDMEAIHAEALEEYDARNTLYVYAPGDAAREVWNQMTPIEQTVSVELRHAEALEMNLFEDRIAAAGKLMFKHGEESAIEACHAEALELNDEIDDGKTMDMYHKWNTAPAAQIRRDMLAAAHSEALVMNEGIELVLRIISAMGGSEGAGDAAGGCLYRDGFNEINYLVSVALTLYARREEAHAEALELNEPSCFSGVLAL
>NZ_CP006580.1|WP_025204042.1|2606800_2607085_-|hypothetical-protein
MTTYSGKNVLALAAEIAETAYQMASTQGINPKDARLALELASRVFIGNKESSETLAKKVSDEILNLQAVMIRNPDIGVHLEKLIIAADRLLEEK
>NZ_CP006580.1|WP_025204041.1|2605541_2605745_-|hypothetical-protein
MTVNISIAVINVISFCPVIECSECEIIVCPFDRHYADRLAKAMAEYNEAYQNLKNKEDNLRAVRRHG
>NZ_CP006580.1|WP_131631879.1|2605218_2605410_-|DUF1482-family-protein
MTPLFALVLTICSGSTDCTDLIEGVYETKAECSHIIYEERYLNAGYYPVDGILHSGAVTASDN
>NZ_CP006580.1|WP_158407510.1|2604740_2604914_-|hypothetical-protein
MDSFFDENLLPAGLSGGESGDELTVMTSELSQQEANADFKTERQAIKAGMYDYISNY
>NZ_CP006580.1|WP_025204037.1|2604097_2604763_-|exodeoxyribonuclease-X
MTIFRIIDTETCGFEGGIVEIASVDVIDGGLPVNPMSDYVKPDRPIGFGAMAIHHITEEMVADKPSVGAVVGRYQTVQLFVAHNAQFDRGVLPDMGGQWLCTWKLAARMWPDLESHANQYLRYALGLNPRVPEHLHAHRALYDCYVTAALFSRIYTESGWSVEEMLEISNQPILLRTMRKGKYAGKTYEEIARIDSGYLSWILTTDMDDNIKHTARHWLKG
>NZ_CP006580.1|WP_025204049.1|2610650_2610932_+|hypothetical-protein
MVKKNTANTGPTVFEFLAENPDLTTGEIARAQGKSMASVAGILAQLGNTGRIIRTGVRDGNPTWRVNDMPHGCSNPVRRMFEQLLKECRHASR
>NZ_CP006580.1|WP_025204050.1|2610918_2611140_+|hypothetical-protein
MHRVENPVCPTCGNTVEMFFKETYWAGSAQIRCVGHHHIGMGYSLGSKQWASEELLRRWQELTDQVKQEQNNG
>NZ_CP006580.1|WP_025204051.1|2611132_2611924_+|hypothetical-protein
MAKNSIDAYGASGKSNVLSFEPEKLHLVTDKSHPLYDERIHLPISEAMVLNIMDQGVLEPIIVWKDPENGLSCVVDGRQRVRHTLEANIRLQAAGRETLKVPAVTKRGSAVRMAQAMISANEIRQADTPVGRAKKMADVLERGHDEDDLALMFGVSIQTVRATLALLDTTQAVRDAVESGTVTFTQARQLASFTPEEQREKVRELEVATAGTTGHEKSRRQRQVLGETKPRMKSRKDITNALETASGEYAAALRWVLGEEETA
>NZ_CP006580.1|WP_025204052.1|2611920_2612169_+|hypothetical-protein
MSNLLLLKCTKDTEGWWTEGEMYPARVVAGGFVLVGDDEELDGEGWSAAPMEYREDGSVLYQVGGINGDVLFEEAANDTQNS
>NZ_CP006580.1|WP_042866419.1|2612149_2612446_+|hypothetical-protein
MTLRTVKPEGPFVLMTFDGDDILFDDRGIVMINGKPKQINVTRLYLERDLGENKVKYWTLNIDEAKKFNTLDEATTQLCKLINPHSIKIRQISQESAQ
>NZ_CP006580.1|WP_025204054.1|2612442_2612799_+|hypothetical-protein
MSNIDKQALREELSNPAVGSNAHLRKLALALLDELEVAENRIAELEATKVKITLPESFHPDGDIDCPLVINEYEIIEAIVAADCKPIAVCPRCKCELDLSHKHDGAHYCHAAGTDKGE
>NZ_CP006580.1|WP_025204055.1|2612801_2613065_+|hypothetical-protein
MAKLTKKEQAWIDELQEVLDRCPSPKKIGFYTIGDPSIALYDLRRVDEVMAELQRRSSSDWCTAVQALGAGFNETIDLPSPVESTAG
>NZ_CP006580.1|WP_025204057.1|2613551_2613908_+|hypothetical-protein
MSTIKTERLTKILSETQAVISECNSRGVHGSVEVNSRLFENVLMELLWHRAAMLQGADGNSHVVPGGLRLALSNAGIAAPESDELLFATHEKYVQMLVTWVKDRKPFQPAQQEGAGGR
>NZ_CP006580.1|WP_025204058.1|2613897_2614290_+|class-I-tRNA-ligase-family-protein
MDDNSDNIIQLVQPKREEERLLDIVVTDNKTATQKHCPHHLCQISEANRTLLCQQCGAYLDPFELILSRSRNGENIVRDIKKLYMRRDELRESVASLEREEKNAKARLRSARTAILFAENDLKNTEQGVK
>NZ_CP006580.1|WP_131631880.1|2614845_2615046_+|hypothetical-protein
MTEDEDMDRICLEIGKAVIALQQRGRYVCVGEIFSYLSDERFDENTIPRRGVLSRAMNLLTTELDD

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Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP006580_2	2.3\|2610085\|21\|NZ_CP006580\|CRISPRCasFinder	2610085-2610105	21	MK416007	Klebsiella phage ST405-OXA48phi1.2, complete genome	6655-6675	2	0.905
NZ_CP006580_1	1.3\|1699094\|28\|NZ_CP006580\|CRISPRCasFinder	1699094-1699121	28	NC_007336	Cupriavidus pinatubonensis JMP134 megaplasmid, complete sequence	97433-97460	5	0.821
NZ_CP006580_1	1.2\|1699037\|34\|NZ_CP006580\|CRISPRCasFinder	1699037-1699070	34	LN997843	Streptomyces reticuli genome assembly TUE45, plasmid : II	685853-685886	6	0.824
NZ_CP006580_1	1.3\|1699094\|28\|NZ_CP006580\|CRISPRCasFinder	1699094-1699121	28	NZ_CP017105	Rhizobium gallicum strain IE4872 plasmid pRgalIE4872d, complete sequence	3411-3438	6	0.786
NZ_CP006580_1	1.3\|1699094\|28\|NZ_CP006580\|CRISPRCasFinder	1699094-1699121	28	CP006880	Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602c, complete sequence	3463-3490	6	0.786
NZ_CP006580_1	1.3\|1699094\|28\|NZ_CP006580\|CRISPRCasFinder	1699094-1699121	28	NZ_CP021914	Sagittula sp. P11 plasmid unnamed1, complete sequence	100918-100945	6	0.786
NZ_CP006580_1	1.3\|1699094\|28\|NZ_CP006580\|CRISPRCasFinder	1699094-1699121	28	NZ_CP014690	Gluconobacter albidus strain TMW2.1191 plasmid pGS1191_1, complete sequence	173962-173989	6	0.786

1. spacer 2.3|2610085|21|NZ_CP006580|CRISPRCasFinder matches to MK416007 (Klebsiella phage ST405-OXA48phi1.2, complete genome) position: , mismatch: 2, identity: 0.905

ccatgagccgaatcctggaaa	CRISPR spacer
tcatgagccgaatcctggaat	Protospacer
.*******************

2. spacer 1.3|1699094|28|NZ_CP006580|CRISPRCasFinder matches to NC_007336 (Cupriavidus pinatubonensis JMP134 megaplasmid, complete sequence) position: , mismatch: 5, identity: 0.821

ccggtgatggatctgccgcaactggtga	CRISPR spacer
cagctgatggctctgccgcaactgctgc	Protospacer
* * ****** ************* **

3. spacer 1.2|1699037|34|NZ_CP006580|CRISPRCasFinder matches to LN997843 (Streptomyces reticuli genome assembly TUE45, plasmid : II) position: , mismatch: 6, identity: 0.824

gtgcggcaggtgacggttctgccggcgacggtac-	CRISPR spacer
ctgcggccggtgccggttctgccgg-gacggctcc	Protospacer
 ****** **** ************ *****. *

4. spacer 1.3|1699094|28|NZ_CP006580|CRISPRCasFinder matches to NZ_CP017105 (Rhizobium gallicum strain IE4872 plasmid pRgalIE4872d, complete sequence) position: , mismatch: 6, identity: 0.786

ccggtgatggatctgccgcaactggtga	CRISPR spacer
aaggtgatggatcggccgcaattggcaa	Protospacer
  *********** *******.***..*

5. spacer 1.3|1699094|28|NZ_CP006580|CRISPRCasFinder matches to CP006880 (Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602c, complete sequence) position: , mismatch: 6, identity: 0.786

ccggtgatggatctgccgcaactggtga	CRISPR spacer
aaggtgatggatcggccgcaattggcaa	Protospacer
  *********** *******.***..*

6. spacer 1.3|1699094|28|NZ_CP006580|CRISPRCasFinder matches to NZ_CP021914 (Sagittula sp. P11 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.786

ccggtgatggatctgccgcaactggtga	CRISPR spacer
gcccagatggatctggcgcaactgatga	Protospacer
 *   ********** ********.***

7. spacer 1.3|1699094|28|NZ_CP006580|CRISPRCasFinder matches to NZ_CP014690 (Gluconobacter albidus strain TMW2.1191 plasmid pGS1191_1, complete sequence) position: , mismatch: 6, identity: 0.786

ccggtgatggatctgccgcaactggtga	CRISPR spacer
gccgtgcaggatctgccgcaactggtcc	Protospacer
 * ***  ******************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

753431 : 821212

Erwinia_phage(26.83%)

integrase,tRNA,holin,plate,transposase,tail

attL 753205:753219|attR 818543:818557

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
753205:753219	attL	NA	NA	NA	NA
WP_014171702.1\|753431_754991_+	HAMP domain-containing protein	A0A2H4J162	uncultured_Caudovirales_phage	8.4e-12	31.1
WP_025202965.1\|754987_755482_-	PadR family transcriptional regulator	NA	NA	NA	NA
WP_025202966.1\|755628_756393_+	siderophore-interacting protein	NA	NA	NA	NA
WP_025202967.1\|756393_757563_-	DNA repair protein	NA	NA	NA	NA
WP_025202968.1\|757843_758419_-	phage repressor protein CI	A0A218M4J1	Erwinia_phage	5.2e-68	64.4
WP_025202969.1\|758706_759045_+	DUF5347 domain-containing protein	A0A218M4I7	Erwinia_phage	6.4e-42	75.7
WP_020883596.1\|759112_759340_+	DUF2732 family protein	A0A0M3UL87	Salmonella_phage	6.4e-14	62.7
WP_020883597.1\|759339_759561_+	TraR/DksA family transcriptional regulator	Q6K1F5	Salmonella_virus	2.1e-25	75.0
WP_042866230.1\|759568_761764_+	replication endonuclease	A0A218M4H2	Erwinia_phage	0.0e+00	74.4
WP_020883599.1\|761873_762314_+	DinI-like family protein	A0A218M4I0	Erwinia_phage	1.0e-52	76.6
WP_020883600.1\|762437_762641_+\|tail	tail X family protein	A0A218M4L8	Erwinia_phage	1.8e-23	74.6
WP_014171693.1\|762631_762853_+	primosomal protein	A0A218M4L5	Erwinia_phage	9.3e-26	76.4
WP_020883601.1\|762836_763346_+	lysozyme	A0A218M4K3	Erwinia_phage	3.0e-75	82.1
WP_080271896.1\|763324_763756_+	protein lysB	O80310	Escherichia_phage	2.6e-32	56.9
WP_072126476.1\|763655_763901_+\|holin	holin	S4TNY4	Salmonella_phage	1.1e-27	74.7
WP_042866232.1\|763863_764331_+\|tail	phage tail protein	A0A218M4K6	Erwinia_phage	4.1e-47	58.8
WP_032678996.1\|764440_765082_+\|plate	phage baseplate assembly protein V	A0A0M4S6F6	Salmonella_phage	9.2e-90	77.9
WP_014171687.1\|765078_765429_+\|plate	baseplate assembly protein	A0A0M4RE59	Salmonella_phage	1.5e-38	69.8
WP_025202974.1\|765434_766343_+\|plate	baseplate assembly protein	A0A0F7LCQ9	Escherichia_phage	9.8e-130	79.5
WP_025202975.1\|766335_766866_+\|tail	phage tail protein I	Q37841	Escherichia_phage	1.8e-91	87.5
WP_025202976.1\|766877_768959_+\|tail	tail protein	S4TP62	Salmonella_phage	2.7e-98	53.7
WP_025202977.1\|768960_769392_+\|tail	tail fiber assembly protein	B6SCW7	Bacteriophage	1.1e-17	40.0
WP_025202978.1\|769707_770895_+\|tail	phage tail sheath protein	A0A0F7LBW9	Escherichia_phage	8.8e-187	81.8
WP_025202979.1\|770906_771425_+\|tail	phage major tail tube protein	A0A218M4J0	Erwinia_phage	1.3e-78	79.7
WP_025202980.1\|771481_771790_+\|tail	phage tail assembly protein	A0A0F7LDQ8	Escherichia_phage	2.0e-26	71.3
WP_014171679.1\|771822_771942_+\|tail	GpE family phage tail protein	O80316	Escherichia_phage	2.8e-13	87.2
WP_025202981.1\|771934_774382_+\|tail	phage tail tape measure protein	Q7Y4C8	Escherichia_virus	4.8e-147	39.8
WP_014171677.1\|774393_774858_+\|tail	phage tail protein	O80317	Escherichia_phage	2.8e-56	67.9
WP_025202982.1\|774854_776009_+	phage late control D family protein	A0A0M5M5V5	Salmonella_phage	1.3e-129	61.5
WP_025202983.1\|776076_776277_+	late control protein B	A0A2I8TV89	Erwinia_phage	6.3e-21	76.8
WP_025202984.1\|776558_777065_+	G/U mismatch-specific DNA glycosylase	NA	NA	NA	NA
WP_020883616.1\|777147_778995_-	RNA polymerase sigma factor RpoD	A0A2I7SAT0	Vibrio_phage	8.4e-35	33.7
WP_025202985.1\|779145_780891_-	DNA primase	A0A0K1LMQ9	Caulobacter_phage	2.1e-75	38.5
WP_001144069.1\|781005_781221_-	30S ribosomal protein S21	NA	NA	NA	NA
WP_020883618.1\|781457_782471_+\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	6.3e-109	58.6
WP_020883619.1\|782511_783129_-	urease accessory protein UreG	NA	NA	NA	NA
WP_025202997.1\|783138_783813_-	urease accessory protein UreF	NA	NA	NA	NA
WP_020883621.1\|783812_784352_-	hypothetical protein	NA	NA	NA	NA
WP_025202998.1\|784361_784826_-	urease accessory protein UreE	NA	NA	NA	NA
WP_025202999.1\|784835_786539_-	urease subunit alpha	NA	NA	NA	NA
WP_025203000.1\|786531_786846_-	urease subunit beta	NA	NA	NA	NA
WP_003862556.1\|786856_787159_-	urease subunit gamma	NA	NA	NA	NA
WP_025203001.1\|787169_787997_-	urease accessory protein UreD	NA	NA	NA	NA
WP_020883628.1\|789658_790273_-	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA
WP_025203002.1\|790380_790749_+	bifunctional dihydroneopterin aldolase/7,8-dihydroneopterin epimerase	NA	NA	NA	NA
WP_014171656.1\|790856_791678_+	undecaprenyl-diphosphate phosphatase	NA	NA	NA	NA
WP_025203003.1\|791688_792930_-	multifunctional CCA addition/repair protein	A0A0F6YPT7	Sinorhizobium_phage	3.5e-93	52.0
WP_025203004.1\|792991_793612_-	SH3 domain-containing protein	NA	NA	NA	NA
WP_025203005.1\|793841_795143_+	inorganic triphosphatase	NA	NA	NA	NA
WP_131631856.1\|795160_798019_+	bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase	NA	NA	NA	NA
WP_020883633.1\|798059_799490_+	bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE	A0A1B1IUK5	uncultured_Mediterranean_phage	5.7e-39	28.6
WP_020883634.1\|799585_799882_-	accessory factor UbiK family protein	NA	NA	NA	NA
WP_014171649.1\|800255_800909_+	3,4-dihydroxy-2-butanone-4-phosphate synthase	A0A2H4PQS2	Staphylococcus_phage	1.6e-44	44.7
WP_014171648.1\|800976_801750_-	zinc transporter ZupT	NA	NA	NA	NA
WP_020883636.1\|801946_802735_+	4,5-DOPA dioxygenase extradiol	NA	NA	NA	NA
WP_014171646.1\|802804_803965_-	glutathionylspermidine synthase family protein	B2ZXR7	Ralstonia_phage	5.4e-88	44.2
WP_014171645.1\|803967_804633_-	DUF1190 family protein	A0A173GEW8	Erwinia_phage	2.4e-40	48.5
WP_020883637.1\|804823_806302_-	outer membrane channel protein TolC	NA	NA	NA	NA
WP_025203007.1\|806506_807139_+	ADP-ribose diphosphatase	NA	NA	NA	NA
WP_014833293.1\|807135_807558_+	DUF1249 family protein	NA	NA	NA	NA
WP_014171641.1\|807585_808413_+	3',5'-cyclic-AMP phosphodiesterase	NA	NA	NA	NA
WP_025203008.1\|808412_808994_+	esterase YqiA	NA	NA	NA	NA
WP_020883640.1\|809022_810915_+	DNA topoisomerase IV subunit B	G3M9Z3	Bacillus_virus	1.0e-91	34.5
WP_025203009.1\|811124_812315_+\|integrase	tyrosine-type recombinase/integrase	Q7M297	Enterobacteria_phage	2.7e-103	47.9
WP_025203010.1\|812744_813701_+	recombinase	A0A222YXF2	Escherichia_phage	4.5e-125	69.5
WP_025203011.1\|813711_814071_+	plasmid stabilization protein	A0A222YWJ6	Escherichia_phage	2.1e-14	43.9
WP_025203012.1\|814254_814938_+	hypothetical protein	NA	NA	NA	NA
WP_071842177.1\|815276_815567_+	hypothetical protein	NA	NA	NA	NA
WP_025203014.1\|815641_816010_-	DUF937 domain-containing protein	NA	NA	NA	NA
WP_162149467.1\|816022_816454_-	DUF3761 domain-containing protein	NA	NA	NA	NA
WP_131631857.1\|816768_816897_-	hypothetical protein	NA	NA	NA	NA
WP_025203015.1\|817330_818200_-	DUF4868 domain-containing protein	NA	NA	NA	NA
WP_025203016.1\|818208_818724_-	hypothetical protein	NA	NA	NA	NA
818543:818557	attR	NA	NA	NA	NA
WP_025203017.1\|818872_820117_-	chromosome partitioning protein ParA	Q9MC01	Enterobacteria_phage	1.7e-71	60.5
WP_131631858.1\|820368_821212_+\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	4.4e-23	50.0

DBSCAN-SWA_2

854143 : 882939

Acidithiobacillus_phage(33.33%)

integrase,plate,transposase

attL 842637:842655|attR 884125:884143

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
842637:842655	attL	NA	NA	NA	NA
WP_025203042.1\|854143_855481_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_025203043.1\|855484_856018_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_025203044.1\|856017_857232_-	type VI secretion system-associated FHA domain protein TagH	NA	NA	NA	NA
WP_025203045.1\|857234_858233_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_025203046.1\|859965_860397_-\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_025203047.1\|860403_861882_-	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_025203048.1\|861906_862410_-	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_131631863.1\|862916_863306_-	hypothetical protein	NA	NA	NA	NA
WP_025203050.1\|863416_864112_-	aquaporin Z	NA	NA	NA	NA
WP_025203051.1\|864693_866490_-	penicillin-binding protein activator	NA	NA	NA	NA
WP_025203052.1\|866551_867064_-	hypothetical protein	NA	NA	NA	NA
WP_025203053.1\|867247_867610_+	DUF1311 domain-containing protein	NA	NA	NA	NA
WP_025203054.1\|867835_868333_+	outer membrane beta-barrel protein	NA	NA	NA	NA
WP_025203055.1\|868639_869383_-	ATP-binding protein	K4HZD4	Acidithiobacillus_phage	2.5e-54	44.2
WP_025203056.1\|869393_870923_-\|transposase	IS21 family transposase	K4I413	Acidithiobacillus_phage	8.3e-121	46.1
WP_131631902.1\|871226_872721_+\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_131631903.1\|872886_874378_+\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_025203060.1\|874801_875419_-	hypothetical protein	NA	NA	NA	NA
WP_131631864.1\|875469_875841_-	hypothetical protein	NA	NA	NA	NA
WP_025203061.1\|876074_876713_-	hypothetical protein	NA	NA	NA	NA
WP_025203062.1\|876709_877369_-	DUF2913 family protein	NA	NA	NA	NA
WP_025203063.1\|877578_878082_+	DUF2165 domain-containing protein	NA	NA	NA	NA
WP_025203064.1\|878330_878897_-\|integrase	tyrosine-type recombinase/integrase	A0A2L1IV36	Escherichia_phage	2.6e-48	50.8
WP_155404639.1\|879446_879599_+	hypothetical protein	NA	NA	NA	NA
WP_025203065.1\|879677_879938_+	hypothetical protein	NA	NA	NA	NA
WP_155404638.1\|880075_880213_+	hypothetical protein	NA	NA	NA	NA
WP_025203066.1\|880563_880968_+	IS66 family insertion sequence hypothetical protein	Q6H9S5	Enterobacteria_phage	5.0e-25	69.5
WP_025203067.1\|880964_881315_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	8.9e-39	66.0
WP_025203068.1\|881346_882939_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	4.2e-176	62.0
884125:884143	attR	NA	NA	NA	NA

DBSCAN-SWA_3

890312 : 925427

Pseudomonas_phage(31.43%)

integrase,capsid,head,plate,terminase,transposase,tail

attL 890565:890580|attR 930016:930031

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_025203076.1\|890312_891080_-	DNA adenine methylase	A2I2Y7	Vibrio_virus	3.4e-99	67.2
890565:890580	attL	NA	NA	NA	NA
WP_025203077.1\|891173_891443_+	hypothetical protein	NA	NA	NA	NA
WP_025203078.1\|891465_891678_-	hypothetical protein	NA	NA	NA	NA
WP_025203079.1\|891745_892324_-\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	5.4e-57	58.1
WP_049866865.1\|892323_893451_-\|tail	tail fiber protein	K7PHC9	Enterobacteria_phage	2.9e-30	72.1
WP_025203081.1\|893447_894032_-	DUF2313 domain-containing protein	F6MIL7	Haemophilus_phage	7.4e-30	38.2
WP_025203082.1\|894028_895099_-\|plate	baseplate J/gp47 family protein	A0A0M3LQN4	Mannheimia_phage	5.5e-79	43.9
WP_025203083.1\|895109_895460_-	hypothetical protein	A0A2H4JDR8	uncultured_Caudovirales_phage	3.1e-31	61.2
WP_025203084.1\|895578_896247_-\|plate	phage baseplate assembly protein	A0A0M3LPA3	Mannheimia_phage	8.2e-41	41.1
WP_025203085.1\|896239_897340_-\|tail	tail protein	A0A2H4J9E6	uncultured_Caudovirales_phage	9.0e-77	40.9
WP_025203086.1\|897323_898643_-	DNA circulation protein	A0A0M3LQ21	Mannheimia_phage	7.1e-28	27.2
WP_025203087.1\|898642_901162_-	hypothetical protein	A0A0M3LPB6	Mannheimia_phage	2.4e-48	31.4
WP_025203088.1\|901299_901680_-\|tail	phage tail assembly protein	NA	NA	NA	NA
WP_025203089.1\|901691_902063_-	hypothetical protein	A0A0M3LRV6	Mannheimia_phage	1.2e-25	50.8
WP_025203090.1\|902074_903463_-\|tail	tail sheath protein	B7SDP8	Haemophilus_phage	5.2e-90	42.5
WP_049866866.1\|903459_904398_-	DUF1834 family protein	B7SDP7	Haemophilus_phage	1.7e-07	58.0
WP_025203092.1\|904397_904832_-	DUF1320 domain-containing protein	B7SDP4	Haemophilus_phage	2.3e-20	37.0
WP_025203093.1\|904835_905744_-\|head	head protein	A0A2H4J778	uncultured_Caudovirales_phage	6.4e-105	60.9
WP_025203094.1\|905755_906271_-	hypothetical protein	A0A2H4JCL7	uncultured_Caudovirales_phage	6.8e-11	43.0
WP_025203095.1\|906267_907317_-	hypothetical protein	A0A0M5N0Q6	Ralstonia_phage	5.6e-68	47.2
WP_025203096.1\|907572_908058_-	phage virion morphogenesis protein	B7SDZ4	Pseudomonas_virus	4.3e-07	33.3
WP_025203097.1\|908050_909310_-\|capsid	minor capsid protein	A0A0M4UTA3	Ralstonia_phage	1.7e-63	41.9
WP_025203098.1\|909296_910877_-	DUF935 domain-containing protein	A0A125RNC0	Pseudomonas_phage	1.7e-132	48.1
WP_025203099.1\|910876_912547_-\|terminase	phage terminase large subunit	Q6TM76	Pseudomonas_phage	2.9e-196	64.0
WP_025203100.1\|912623_912848_+	hypothetical protein	NA	NA	NA	NA
WP_025203101.1\|912819_913566_-	hypothetical protein	NA	NA	NA	NA
WP_025203102.1\|913609_913801_-	hypothetical protein	NA	NA	NA	NA
WP_025203103.1\|913793_914294_-	DUF1804 family protein	L7P7Y5	Pseudomonas_phage	6.6e-43	50.9
WP_025203104.1\|914295_914523_-	hypothetical protein	NA	NA	NA	NA
WP_025203105.1\|914519_914774_-	hypothetical protein	NA	NA	NA	NA
WP_025203106.1\|914763_914958_-	hypothetical protein	NA	NA	NA	NA
WP_025203107.1\|914950_915190_-	hypothetical protein	NA	NA	NA	NA
WP_025203108.1\|915186_915663_-	hypothetical protein	F6MIJ9	Haemophilus_phage	1.5e-33	44.6
WP_025203109.1\|915745_916195_-	hypothetical protein	A0A2D1GNW5	Pseudomonas_phage	1.7e-26	44.4
WP_025203110.1\|916191_916590_-	regulatory protein GemA	H6V8M4	Pseudomonas_phage	7.3e-21	44.3
WP_025203111.1\|916589_916793_-	hypothetical protein	NA	NA	NA	NA
WP_158407495.1\|916789_916939_-	hypothetical protein	NA	NA	NA	NA
WP_025203113.1\|917348_917726_-	hypothetical protein	A0A1B0VBU7	Salmonella_phage	2.1e-33	53.3
WP_025203114.1\|917750_918032_-	hypothetical protein	A0A077KAZ4	Edwardsiella_phage	5.9e-33	81.6
WP_025203115.1\|918034_918331_-	hypothetical protein	NA	NA	NA	NA
WP_025203116.1\|918327_918792_-	hypothetical protein	NA	NA	NA	NA
WP_025203117.1\|918788_919118_-	hypothetical protein	Q9MCR3	Enterobacteria_phage	4.3e-11	41.3
WP_025203118.1\|919114_919399_-	hypothetical protein	NA	NA	NA	NA
WP_080271863.1\|919476_919881_-	hypothetical protein	A0A1X9SG60	Bacillus_phage	1.1e-21	53.6
WP_025203120.1\|919958_920150_-	hypothetical protein	A0A2D1GNV5	Pseudomonas_phage	1.9e-11	60.3
WP_025203121.1\|920293_920920_-	DUF3164 family protein	A0A2D1GNM4	Pseudomonas_phage	3.8e-72	64.9
WP_025203122.1\|920936_921161_-	hypothetical protein	NA	NA	NA	NA
WP_025203123.1\|921171_921489_-	hypothetical protein	NA	NA	NA	NA
WP_025203124.1\|921498_922392_-	AAA family ATPase	A0A2D1GNS0	Pseudomonas_phage	3.6e-92	58.1
WP_025203125.1\|922408_924454_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	A0A2D1GNK9	Pseudomonas_phage	8.6e-182	49.5
WP_025203126.1\|924456_924705_-	DNA-binding protein	A0A2D1GNH1	Pseudomonas_phage	1.2e-34	84.1
WP_025203127.1\|924869_925427_+	hypothetical protein	A0A2D1GNR8	Pseudomonas_phage	1.2e-42	56.4
930016:930031	attR	NA	NA	NA	NA

DBSCAN-SWA_4

1153279 : 1160746

Enterobacteria_phage(33.33%)

tRNA,integrase

attL 1146297:1146309|attR 1159039:1159051

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1146297:1146309	attL	NA	NA	NA	NA
WP_025203283.1\|1153279_1154797_+\|tRNA	lysine--tRNA ligase	A0A2K9L3L6	Tupanvirus	2.9e-86	37.3
WP_025203284.1\|1154836_1155379_-	isopentenyl-diphosphate Delta-isomerase	NA	NA	NA	NA
WP_162149472.1\|1155517_1156282_+	peptidoglycan DD-metalloendopeptidase family protein	A0A7K9	Microcystis_virus	2.9e-10	37.0
WP_025203286.1\|1156600_1157827_+\|integrase	tyrosine-type recombinase/integrase	Q7M297	Enterobacteria_phage	1.3e-145	61.9
WP_025203287.1\|1158130_1158796_+	hypothetical protein	NA	NA	NA	NA
WP_025203288.1\|1159003_1159201_+	AlpA family transcriptional regulator	A0A1V0E8E5	Vibrio_phage	1.7e-07	49.1
1159039:1159051	attR	NA	NA	NA	NA
WP_042866809.1\|1159308_1160169_+	ORF6N domain-containing protein	Q8W644	Enterobacteria_phage	1.7e-51	60.3
WP_025203289.1\|1160173_1160746_+	antirepressor protein	A0A1W6JPH8	Morganella_phage	1.9e-54	59.6

DBSCAN-SWA_5

1179147 : 1185523

Stx2-converting_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_025203313.1\|1179147_1179876_+	DUF3800 domain-containing protein	Q19UP3	Mannheimia_phage	4.5e-16	29.6
WP_025203066.1\|1179907_1180312_+	IS66 family insertion sequence hypothetical protein	Q6H9S5	Enterobacteria_phage	5.0e-25	69.5
WP_025203067.1\|1180308_1180659_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	8.9e-39	66.0
WP_025203068.1\|1180690_1182283_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	4.2e-176	62.0
WP_158407501.1\|1182599_1182749_-	hypothetical protein	NA	NA	NA	NA
WP_131631871.1\|1183418_1183988_+	recombinase family protein	A0A0F7LA37	Escherichia_phage	1.1e-22	36.3
WP_000537152.1\|1184387_1184672_+\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_080271869.1\|1184668_1185523_+\|transposase	IS3 family transposase	U5P429	Shigella_phage	4.4e-79	55.8

DBSCAN-SWA_6

1651238 : 1737829

Escherichia_phage(20.0%)

integrase,head,capsid,tRNA,plate,terminase,portal,tail

attL 1656303:1656319|attR 1684862:1684878

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014171074.1\|1651238_1652654_+\|tRNA	glutamate--tRNA ligase	NA	NA	NA	NA
WP_042866304.1\|1652698_1653091_-	putative DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_014171072.1\|1653092_1653455_-	putative DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_025203504.1\|1654079_1656269_+	sensor domain-containing phosphodiesterase	NA	NA	NA	NA
1656303:1656319	attL	NA	NA	NA	NA
WP_025203505.1\|1656313_1657501_-	NupC/NupG family nucleoside CNT transporter	NA	NA	NA	NA
WP_020883097.1\|1657851_1659090_+	Mn(2+) uptake NRAMP transporter MntH	NA	NA	NA	NA
WP_014171067.1\|1659151_1659499_-	DUF2502 domain-containing protein	NA	NA	NA	NA
WP_025203506.1\|1659626_1660625_-	L-glyceraldehyde 3-phosphate reductase	NA	NA	NA	NA
WP_025203507.1\|1660809_1662468_+	indolepyruvate decarboxylase	NA	NA	NA	NA
WP_025203508.1\|1662468_1663704_-	ion channel protein	NA	NA	NA	NA
WP_014171063.1\|1663909_1664875_+	glucokinase	NA	NA	NA	NA
WP_025203509.1\|1664907_1665639_-	response regulator transcription factor	A0A2R2ZGH8	Clostridioides_phage	4.2e-14	25.1
WP_025203510.1\|1665652_1667350_-	sensor histidine kinase	NA	NA	NA	NA
WP_025203511.1\|1667736_1668975_+	alanine transaminase	NA	NA	NA	NA
WP_099458937.1\|1669027_1669099_-	membrane protein YpdK	NA	NA	NA	NA
WP_025203512.1\|1669453_1670374_-	kdo(2)-lipid IV(A) palmitoleoyltransferase	A0A1W6JP29	Morganella_phage	3.7e-76	54.7
WP_025203513.1\|1670657_1671134_-	WbuC family cupin fold metalloprotein	NA	NA	NA	NA
WP_071842227.1\|1671308_1671983_+	DNA-binding protein	NA	NA	NA	NA
WP_025203514.1\|1672212_1673385_+\|integrase	site-specific integrase	G3CFG6	Escherichia_phage	3.6e-185	77.9
WP_071842188.1\|1673368_1673551_-	helix-turn-helix domain-containing protein	G3CFG7	Escherichia_phage	2.2e-17	69.5
WP_158407503.1\|1673558_1673720_-	hypothetical protein	A0A1B5FPC2	Escherichia_phage	1.2e-11	68.9
WP_025203516.1\|1674108_1674333_-	hypothetical protein	A0A286S2B3	Klebsiella_phage	1.7e-14	52.7
WP_025203517.1\|1674329_1674539_-	hypothetical protein	NA	NA	NA	NA
WP_049866905.1\|1674538_1675285_-	hypothetical protein	B1GS65	Salmonella_phage	1.6e-13	46.8
WP_025203519.1\|1675590_1675947_-	hypothetical protein	NA	NA	NA	NA
WP_025203520.1\|1676141_1676558_-	hypothetical protein	NA	NA	NA	NA
WP_158407504.1\|1676558_1676777_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_158407505.1\|1676820_1677066_+	DUF1589 domain-containing protein	NA	NA	NA	NA
WP_025203522.1\|1677731_1678388_-	helix-turn-helix domain-containing protein	K7PLZ5	Enterobacterial_phage	1.0e-64	57.3
WP_025203523.1\|1678484_1678703_+	hypothetical protein	NA	NA	NA	NA
WP_025203524.1\|1678706_1679564_+	hypothetical protein	Q8W644	Enterobacteria_phage	1.8e-61	46.2
WP_025203525.1\|1679560_1679953_+	restriction alleviation protein, Lar family	NA	NA	NA	NA
WP_025203526.1\|1680187_1680661_-	hypothetical protein	NA	NA	NA	NA
WP_071842190.1\|1681767_1683384_+	DEAD/DEAH box helicase	A0A286N2P9	Klebsiella_phage	2.3e-246	74.2
WP_025203529.1\|1683396_1684362_+	DNA primase	A0A286N2Q0	Klebsiella_phage	3.6e-154	81.3
WP_025203530.1\|1684520_1685336_+	antitermination protein	A0A1B5FPA5	Escherichia_phage	2.0e-97	63.1
1684862:1684878	attR	NA	NA	NA	NA
WP_025203531.1\|1686439_1687423_+	hypothetical protein	NA	NA	NA	NA
WP_025205582.1\|1687607_1687922_+	hypothetical protein	NA	NA	NA	NA
WP_025203533.1\|1688267_1688489_+	hypothetical protein	NA	NA	NA	NA
WP_158407506.1\|1688488_1688665_+	hypothetical protein	NA	NA	NA	NA
WP_158407507.1\|1688661_1688838_+	hypothetical protein	NA	NA	NA	NA
WP_025203534.1\|1688907_1689099_+	hypothetical protein	NA	NA	NA	NA
WP_025203535.1\|1689231_1689717_+	hypothetical protein	NA	NA	NA	NA
WP_025203536.1\|1689722_1690382_+	hypothetical protein	A0A1B0Z000	Pseudomonas_phage	9.4e-05	23.1
WP_025203537.1\|1690632_1690920_+	hypothetical protein	NA	NA	NA	NA
WP_025203538.1\|1691213_1691807_+	hypothetical protein	NA	NA	NA	NA
WP_049866876.1\|1691748_1693863_+\|terminase	terminase	K4I3Y9	Acidithiobacillus_phage	9.7e-96	36.3
WP_080271899.1\|1693897_1694128_+\|head,tail	phage head-tail adapter protein	NA	NA	NA	NA
WP_025203541.1\|1694129_1695803_+\|portal	phage portal protein	A0A291AUL8	Sinorhizobium_phage	1.7e-95	35.6
WP_025203542.1\|1695799_1696660_+	S49 family peptidase	A0A2I6TC87	Escherichia_phage	4.4e-47	37.8
WP_042866847.1\|1696697_1697261_+	hypothetical protein	NA	NA	NA	NA
WP_042866310.1\|1697263_1697668_+\|head	head decoration protein	A0A067ZIL6	Vibrio_phage	4.0e-06	32.1
WP_025203545.1\|1697748_1698807_+\|capsid	major capsid protein	A0A059WRQ2	Vibrio_phage	1.0e-40	31.3
WP_025203547.1\|1699214_1699556_+	hypothetical protein	NA	NA	NA	NA
WP_025203548.1\|1699552_1700140_+	hypothetical protein	NA	NA	NA	NA
WP_025203549.1\|1700142_1700361_+	DUF2635 domain-containing protein	NA	NA	NA	NA
WP_025203550.1\|1700357_1701851_+\|tail	tail protein	B5TK67	Pseudomonas_phage	2.5e-98	43.1
WP_025203551.1\|1701860_1702229_+\|tail	phage tail protein	NA	NA	NA	NA
WP_049866877.1\|1702230_1702563_+\|tail	phage tail assembly protein	NA	NA	NA	NA
WP_025203553.1\|1702668_1704669_+	hypothetical protein	Q858G0	Salmonella_phage	2.7e-18	38.3
WP_025203554.1\|1704738_1706109_+	hypothetical protein	NA	NA	NA	NA
WP_025203555.1\|1706105_1707179_+\|tail	tail protein	M1PVV2	Vibrio_phage	2.3e-40	31.1
WP_131631874.1\|1707175_1707805_+\|plate	phage baseplate assembly protein	Q8W617	Enterobacteria_phage	3.4e-12	31.2
WP_025203557.1\|1707801_1708239_+	hypothetical protein	B5TK74	Pseudomonas_phage	5.4e-17	57.0
WP_025203558.1\|1708240_1709416_+\|plate	baseplate J/gp47 family protein	B5TK75	Pseudomonas_phage	2.3e-30	30.4
WP_042866311.1\|1709412_1709976_+	DUF2313 domain-containing protein	A0A0M3LQE1	Mannheimia_phage	5.9e-08	33.1
WP_025203560.1\|1711312_1711822_+\|tail	tail fiber assembly protein	A0A077SK10	Escherichia_phage	2.9e-14	35.3
WP_025203561.1\|1711866_1712787_-	hypothetical protein	NA	NA	NA	NA
WP_025203562.1\|1713717_1714233_+	DUF2165 domain-containing protein	NA	NA	NA	NA
WP_148296960.1\|1714281_1714545_-	DinI-like family protein	NA	NA	NA	NA
WP_025203563.1\|1714555_1714798_-	DinI family protein	K7PKM2	Enterobacterial_phage	3.4e-29	82.3
WP_020883107.1\|1715058_1715988_-	formate/nitrite transporter family protein	E7DYY8	Enterobacteria_phage	1.7e-140	85.1
WP_020883108.1\|1716303_1717056_+	phospholipid-binding lipoprotein MlaA	NA	NA	NA	NA
WP_020883109.1\|1717119_1718448_-	long-chain fatty acid transporter FadL	NA	NA	NA	NA
WP_014171053.1\|1718820_1719105_+	YfcZ/YiiS family protein	NA	NA	NA	NA
WP_025203564.1\|1719344_1720655_+	acetyl-CoA C-acyltransferase FadI	NA	NA	NA	NA
WP_025203565.1\|1720654_1722802_+	fatty acid oxidation complex subunit alpha FadJ	NA	NA	NA	NA
WP_014171048.1\|1723011_1723497_+	phosphohistidine phosphatase SixA	NA	NA	NA	NA
WP_014171047.1\|1723545_1724097_-	endonuclease SmrB	NA	NA	NA	NA
WP_014171046.1\|1724242_1725175_+	50S ribosomal protein L3 N(5)-glutamine methyltransferase	NA	NA	NA	NA
WP_025203566.1\|1725235_1726321_+	chorismate synthase	A0A291AU41	Pandoravirus	1.6e-86	46.9
WP_014171044.1\|1726323_1727148_+	penicillin-insensitive murein endopeptidase	NA	NA	NA	NA
WP_014171043.1\|1727147_1727957_+	TSUP family transporter	NA	NA	NA	NA
WP_020883114.1\|1727956_1728502_+	elongation factor P hydroxylase	NA	NA	NA	NA
WP_020883115.1\|1728515_1728794_+	YfcL family protein	NA	NA	NA	NA
WP_025203567.1\|1728844_1730842_-\|tRNA	bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC	NA	NA	NA	NA
WP_014171039.1\|1731000_1732218_+	beta-ketoacyl-ACP synthase I	NA	NA	NA	NA
WP_025203568.1\|1732424_1733603_+	MFS transporter	NA	NA	NA	NA
WP_025203569.1\|1733680_1734685_-	flagella biosynthesis regulator Flk	NA	NA	NA	NA
WP_025203570.1\|1734799_1735936_+	4-phosphoerythronate dehydrogenase PdxB	A0A2R8FDS8	Brazilian_cedratvirus	7.2e-21	27.3
WP_014171035.1\|1736003_1737017_+	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_025203571.1\|1737016_1737829_+\|tRNA	tRNA pseudouridine(38-40) synthase TruA	NA	NA	NA	NA

DBSCAN-SWA_7

2597760 : 2642759

Escherichia_phage(15.38%)

integrase,tRNA,plate,terminase,tail

attL 2605250:2605266|attR 2645238:2645254

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_025204030.1\|2597760_2598696_-\|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	A0A0U2S5Z2	Escherichia_phage	2.2e-140	94.9
WP_025204032.1\|2599150_2600176_+	hypothetical protein	NA	NA	NA	NA
WP_025204033.1\|2600181_2601390_+	hypothetical protein	NA	NA	NA	NA
WP_025204034.1\|2601380_2602628_-\|integrase	site-specific integrase	A0A0U2JGI6	Escherichia_phage	5.1e-169	68.8
WP_071842196.1\|2602629_2602842_-	DUF1233 family excisionase	A0A0U2RY08	Escherichia_phage	2.8e-19	62.0
WP_025204036.1\|2603228_2604092_-	ATP-binding protein	A0A1B1P9H8	Acinetobacter_phage	2.3e-59	52.4
WP_025204037.1\|2604097_2604763_-	exodeoxyribonuclease X	A0A0H4IT92	Pseudoalteromonas_phage	3.2e-13	29.7
WP_158407510.1\|2604740_2604914_-	hypothetical protein	NA	NA	NA	NA
WP_131631879.1\|2605218_2605410_-	DUF1482 family protein	NA	NA	NA	NA
2605250:2605266	attL	NA	NA	NA	NA
WP_025204041.1\|2605541_2605745_-	hypothetical protein	NA	NA	NA	NA
WP_025204042.1\|2606800_2607085_-	hypothetical protein	A0A0U2S618	Escherichia_phage	1.2e-06	37.6
WP_025204043.1\|2607102_2607783_-	hypothetical protein	NA	NA	NA	NA
WP_025204044.1\|2608019_2608403_-	helix-turn-helix domain-containing protein	K7PH71	Enterobacterial_phage	6.8e-16	62.3
WP_025204045.1\|2608508_2608751_+	helix-turn-helix transcriptional regulator	K7PMD5	Enterobacterial_phage	1.3e-15	60.6
WP_025204046.1\|2608750_2609215_+	hypothetical protein	NA	NA	NA	NA
WP_025204047.1\|2609228_2609474_+	DUF4222 domain-containing protein	NA	NA	NA	NA
WP_049866883.1\|2609470_2610637_+	hypothetical protein	K7PLZ7	Enterobacterial_phage	3.9e-30	50.4
WP_025204049.1\|2610650_2610932_+	hypothetical protein	NA	NA	NA	NA
WP_025204050.1\|2610918_2611140_+	hypothetical protein	NA	NA	NA	NA
WP_025204051.1\|2611132_2611924_+	hypothetical protein	A4JX52	Burkholderia_virus	1.1e-63	51.5
WP_025204052.1\|2611920_2612169_+	hypothetical protein	S4TVX5	Salmonella_phage	1.6e-10	43.1
WP_042866419.1\|2612149_2612446_+	hypothetical protein	NA	NA	NA	NA
WP_025204054.1\|2612442_2612799_+	hypothetical protein	NA	NA	NA	NA
WP_025204055.1\|2612801_2613065_+	hypothetical protein	S4TNB5	Salmonella_phage	5.1e-31	72.4
WP_025204057.1\|2613551_2613908_+	hypothetical protein	NA	NA	NA	NA
WP_025204058.1\|2613897_2614290_+\|tRNA	class I tRNA ligase family protein	A0A193GYM6	Enterobacter_phage	7.2e-37	61.5
WP_131631880.1\|2614845_2615046_+	hypothetical protein	NA	NA	NA	NA
WP_025204060.1\|2615323_2615479_+	type I toxin-antitoxin system Hok family toxin	A0A1I9LJU7	Stx_converting_phage	1.4e-12	80.4
WP_131631881.1\|2615862_2616048_+	hypothetical protein	NA	NA	NA	NA
WP_025204062.1\|2616193_2616799_+	hypothetical protein	A0A0M4RU10	Salmonella_phage	4.7e-43	48.8
WP_131631909.1\|2616810_2617053_+	hypothetical protein	Q8W639	Enterobacteria_phage	1.1e-24	75.9
WP_025204064.1\|2617049_2617673_+	hypothetical protein	Q8HA89	Salmonella_phage	3.6e-83	70.1
WP_025204065.1\|2618957_2619320_+	hypothetical protein	NA	NA	NA	NA
WP_025204066.1\|2619477_2619693_+	hypothetical protein	NA	NA	NA	NA
WP_025204067.1\|2620285_2621290_+\|integrase	site-specific integrase	A0A159B6J3	Gordonia_phage	4.3e-09	29.1
WP_025204068.1\|2621534_2622137_+	hypothetical protein	NA	NA	NA	NA
WP_025204069.1\|2622117_2623422_+\|terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	4.0e-148	60.9
WP_049866884.1\|2623495_2624827_+	DUF4055 domain-containing protein	A0A0H5AWC7	Pseudomonas_phage	4.6e-83	40.5
WP_025204071.1\|2624937_2625699_+	hypothetical protein	A0A0H5AWD1	Pseudomonas_phage	7.1e-57	56.2
WP_025204072.1\|2625710_2626832_+	hypothetical protein	W6EBZ8	Rhizobium_phage	8.2e-94	52.6
WP_025204074.1\|2627207_2627600_+	hypothetical protein	NA	NA	NA	NA
WP_025204075.1\|2627602_2628298_+	hypothetical protein	NA	NA	NA	NA
WP_025204076.1\|2628297_2628909_+	hypothetical protein	NA	NA	NA	NA
WP_131631882.1\|2628908_2629130_+	hypothetical protein	NA	NA	NA	NA
WP_025204078.1\|2629190_2630732_+\|tail	tail protein	B3GAJ6	uncultured_virus	1.1e-101	45.6
WP_025204079.1\|2630774_2631209_+	hypothetical protein	NA	NA	NA	NA
WP_025204080.1\|2631223_2631613_+	hypothetical protein	NA	NA	NA	NA
WP_158407511.1\|2631612_2631774_+	hypothetical protein	NA	NA	NA	NA
WP_025204081.1\|2631782_2632229_+	hypothetical protein	NA	NA	NA	NA
WP_025204082.1\|2632288_2632639_-	hypothetical protein	NA	NA	NA	NA
WP_025204083.1\|2632859_2633159_-	DUF3761 domain-containing protein	NA	NA	NA	NA
WP_131631883.1\|2633346_2633682_+	hypothetical protein	NA	NA	NA	NA
WP_025204085.1\|2636053_2637025_+	hypothetical protein	NA	NA	NA	NA
WP_025204086.1\|2637017_2638139_+	hypothetical protein	NA	NA	NA	NA
WP_049866885.1\|2638135_2638831_+	hypothetical protein	B3GAJ7	uncultured_virus	4.9e-20	37.9
WP_025204088.1\|2638833_2639217_+	hypothetical protein	NA	NA	NA	NA
WP_025204089.1\|2639213_2640338_+\|plate	baseplate protein	B3GAJ9	uncultured_virus	3.4e-55	41.5
WP_131631910.1\|2640385_2641000_+	hypothetical protein	NA	NA	NA	NA
WP_080271901.1\|2641226_2642759_+\|tail	tail fiber protein	K7PHC9	Enterobacteria_phage	2.2e-25	63.0
2645238:2645254	attR	NA	NA	NA	NA

DBSCAN-SWA_8

3434841 : 3487008

Rhizobium_phage(20.0%)

plate,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014169450.1\|3434841_3435291_-\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_071842202.1\|3435688_3436072_-	hypothetical protein	NA	NA	NA	NA
WP_108648620.1\|3436158_3436473_-	hypothetical protein	NA	NA	NA	NA
WP_014169449.1\|3436534_3437518_-	hypothetical protein	NA	NA	NA	NA
WP_025204507.1\|3437522_3439985_-	type VI secretion system tip protein VgrG	NA	NA	NA	NA
WP_025204508.1\|3439989_3440514_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_025204509.1\|3440549_3441632_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_025204510.1\|3441595_3443365_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_025204512.1\|3443798_3444650_-	hypothetical protein	NA	NA	NA	NA
WP_025204513.1\|3444678_3446286_-	type VI secretion system protein TssA	NA	NA	NA	NA
WP_025204514.1\|3446686_3450058_-	type VI secretion protein VasK	NA	NA	NA	NA
WP_025204515.1\|3450050_3451259_-	hypothetical protein	NA	NA	NA	NA
WP_032418592.1\|3451261_3451525_-	PAAR domain-containing protein	R9U4D0	Rhizobium_phage	8.8e-07	50.0
WP_025204517.1\|3451556_3452333_-	hypothetical protein	NA	NA	NA	NA
WP_025204518.1\|3452473_3453277_-	hypothetical protein	NA	NA	NA	NA
WP_025204519.1\|3453285_3455715_-	hypothetical protein	Q4ZE13	Staphylococcus_virus	9.3e-34	38.0
WP_025204520.1\|3455730_3458088_-	type VI secretion system tip protein VgrG	NA	NA	NA	NA
WP_025204521.1\|3458084_3460754_-	type VI secretion system ATPase TssH	K4FB40	Cronobacter_phage	3.0e-94	32.8
WP_025204522.1\|3460916_3461408_-	Hcp family type VI secretion system effector	NA	NA	NA	NA
WP_025204523.1\|3461410_3463090_-	OmpA family protein	NA	NA	NA	NA
WP_025204524.1\|3463089_3463779_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_025204525.1\|3463775_3465125_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_025204526.1\|3465138_3466686_-	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_025204527.1\|3466719_3467220_-	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_025204528.1\|3467930_3468200_+	DUF4942 domain-containing protein	NA	NA	NA	NA
WP_025204529.1\|3468762_3470391_-	peptide ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_014169445.1\|3470660_3471320_+\|protease	FtsH protease modulator YccA	A0A2H4JFM9	uncultured_Caudovirales_phage	2.9e-46	53.9
WP_020884782.1\|3471408_3471738_+	sulfurtransferase TusE	NA	NA	NA	NA
WP_020884783.1\|3471734_3472016_-	acylphosphatase	NA	NA	NA	NA
WP_020884784.1\|3472027_3472816_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_025204530.1\|3472826_3473384_-	kinase inhibitor	NA	NA	NA	NA
WP_032677819.1\|3473559_3474750_+	23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI	NA	NA	NA	NA
WP_013097248.1\|3474810_3475128_+	heat shock protein HspQ	NA	NA	NA	NA
WP_160890496.1\|3475162_3475633_-	CoA-binding protein	NA	NA	NA	NA
WP_025204533.1\|3475751_3476414_+	DUF2057 family protein	NA	NA	NA	NA
WP_020884788.1\|3476494_3476953_+	methylglyoxal synthase	NA	NA	NA	NA
WP_025204534.1\|3477012_3479067_-	DNA helicase IV	A7KV33	Bacillus_phage	1.4e-17	27.9
WP_025204535.1\|3479190_3479637_+	YccF domain-containing protein	NA	NA	NA	NA
WP_020884791.1\|3479656_3481819_+	TIGR01666 family membrane protein	NA	NA	NA	NA
WP_020884792.1\|3481775_3482402_-	TfoX/Sxy family DNA transformation protein	NA	NA	NA	NA
WP_025204536.1\|3482619_3483129_+	cell division inhibitor SulA	NA	NA	NA	NA
WP_020884794.1\|3483483_3484539_+	porin OmpA	NA	NA	NA	NA
WP_014169429.1\|3484608_3485061_-	macrodomain Ter protein MatP	NA	NA	NA	NA
WP_025204537.1\|3485247_3487008_+\|protease	Lon protease family protein	NA	NA	NA	NA

DBSCAN-SWA_9

4037797 : 4107296

Enterobacteria_phage(31.25%)

integrase,tRNA,protease,terminase,portal,tail

attL 4030666:4030681|attR 4096594:4096609

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
4030666:4030681	attL	NA	NA	NA	NA
WP_025204790.1\|4037797_4040773_-	hypothetical protein	Q5G8V6	Enterobacteria_phage	2.3e-34	49.3
WP_025204791.1\|4040818_4044373_-	DUF1983 domain-containing protein	O64335	Escherichia_phage	0.0e+00	77.9
WP_025204792.1\|4044432_4045050_-\|tail	tail assembly protein	K7PGY0	Enterobacteria_phage	4.1e-71	66.8
WP_025204793.1\|4045046_4045766_-	peptidase P60	K7PGR2	Enterobacteria_phage	3.9e-121	82.1
WP_025204794.1\|4045767_4046523_-\|tail	phage minor tail protein L	K7PGX3	Enterobacteria_phage	2.6e-112	72.1
WP_025204795.1\|4046522_4046879_-\|tail	phage tail protein	K7P7G7	Enterobacteria_phage	1.6e-22	47.4
WP_025204796.1\|4046939_4050077_-\|tail	phage tail tape measure protein	E4WL33	Enterobacteria_phage	4.8e-184	42.6
WP_042866553.1\|4050060_4050390_-\|tail	phage tail assembly protein T	A5LH37	Enterobacteria_phage	9.3e-22	54.5
WP_025204798.1\|4050386_4050785_-\|tail	phage minor tail protein G	A0A291AWW5	Escherichia_phage	4.0e-11	36.8
WP_025204799.1\|4050844_4051597_-\|tail	phage tail protein	A0A2I6TC77	Escherichia_phage	1.7e-90	67.6
WP_025204800.1\|4051607_4052009_-\|tail	phage tail protein	K7PHM6	Enterobacterial_phage	1.4e-56	75.2
WP_131631887.1\|4052005_4052590_-\|tail	phage tail protein	M9NZH5	Enterobacteria_phage	4.8e-69	69.6
WP_025204802.1\|4052600_4052876_-	hypothetical protein	K7PH55	Enterobacterial_phage	3.1e-26	72.5
WP_025204803.1\|4052859_4053195_-	DUF2190 family protein	K7PJY3	Enterobacterial_phage	2.1e-29	57.9
WP_025204804.1\|4053263_4055207_-\|protease	Clp protease ClpP	K7PKX4	Enterobacterial_phage	0.0e+00	84.1
WP_025204805.1\|4055217_4056723_-\|portal	phage portal protein	K7PHM5	Enterobacterial_phage	2.0e-244	81.8
WP_025204806.1\|4056719_4056935_-	hypothetical protein	A5LH28	Enterobacteria_phage	1.7e-24	78.6
WP_025204807.1\|4056931_4059034_-\|terminase	phage terminase large subunit family protein	K7PH52	Enterobacterial_phage	0.0e+00	83.6
WP_025204808.1\|4059033_4059522_-	DUF1441 family protein	K7PJY2	Enterobacterial_phage	2.0e-65	80.7
WP_131631912.1\|4059731_4059944_-	hypothetical protein	NA	NA	NA	NA
WP_025204810.1\|4059970_4060156_-	hypothetical protein	NA	NA	NA	NA
WP_025204811.1\|4060155_4060380_-	hypothetical protein	NA	NA	NA	NA
WP_025204812.1\|4060748_4060991_+	hypothetical protein	NA	NA	NA	NA
WP_025204813.1\|4061080_4061986_-	hypothetical protein	NA	NA	NA	NA
WP_025204814.1\|4063102_4063939_-	antitermination protein	A0A1B5FPA5	Escherichia_phage	5.0e-120	75.7
WP_025204815.1\|4064023_4064947_-	hypothetical protein	F1C596	Cronobacter_phage	2.9e-60	48.9
WP_025204816.1\|4064990_4065383_-	single-stranded DNA-binding protein	NA	NA	NA	NA
WP_025204817.1\|4065379_4067509_-	DUF927 domain-containing protein	A0A1W6JPG0	Morganella_phage	1.2e-186	58.0
WP_049866891.1\|4067519_4067969_-	hypothetical protein	A0A1B5FPB4	Escherichia_phage	5.6e-17	42.9
WP_025204818.1\|4067961_4068249_-	host cell division inhibitor Icd-like protein	A0A2H4JGW3	uncultured_Caudovirales_phage	4.6e-17	51.1
WP_025204819.1\|4068442_4068775_+	hypothetical protein	NA	NA	NA	NA
WP_025204820.1\|4068854_4069472_-	hypothetical protein	H6WRU8	Salmonella_phage	1.8e-21	45.0
WP_025204821.1\|4069577_4069775_-	AlpA family transcriptional regulator	A0A1V0E8E5	Vibrio_phage	3.0e-07	45.5
WP_025204822.1\|4069930_4070953_-	hypothetical protein	NA	NA	NA	NA
WP_025204823.1\|4071268_4072456_-\|integrase	tyrosine-type recombinase/integrase	Q7M297	Enterobacteria_phage	1.1e-123	55.4
WP_025204824.1\|4072977_4073676_+	EAL domain-containing protein	NA	NA	NA	NA
WP_014168952.1\|4075228_4075861_+	fimbria biosynthesis transcriptional regulator FimZ	NA	NA	NA	NA
WP_020885153.1\|4075912_4076437_-	fimbria assembly protein	NA	NA	NA	NA
WP_020885154.1\|4076446_4077454_-	type 1 fimbrin D-mannose specific adhesin FimH	NA	NA	NA	NA
WP_020885155.1\|4077446_4080008_-	fimbrial biogenesis usher protein	NA	NA	NA	NA
WP_020885156.1\|4080022_4080715_-	type 1 fimbria chaperone FimC	NA	NA	NA	NA
WP_020885157.1\|4080749_4081295_-	type 1 fimbrial protein subunit FimI	NA	NA	NA	NA
WP_020885158.1\|4081362_4081926_-	type 1 fimbrial protein subunit FimA	NA	NA	NA	NA
WP_014168945.1\|4082236_4083103_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	A0A249XZQ2	Enterococcus_phage	2.5e-29	33.9
WP_014168944.1\|4083104_4083317_+	ribosome-associated protein YbcJ	NA	NA	NA	NA
WP_014168943.1\|4083537_4085037_+	PTS transporter subunit EIIC	NA	NA	NA	NA
WP_014168942.1\|4085121_4086138_+	Mal regulon transcriptional regulator MalI	NA	NA	NA	NA
WP_025204825.1\|4086210_4086732_+	metal-dependent hydrolase	NA	NA	NA	NA
WP_020885161.1\|4086810_4088196_-\|tRNA	cysteine--tRNA ligase	M1PG92	Moumouvirus	8.7e-45	34.5
WP_014168939.1\|4088370_4088865_+	peptidylprolyl isomerase B	NA	NA	NA	NA
WP_025204826.1\|4088868_4089591_+	UDP-2,3-diacylglucosamine diphosphatase	NA	NA	NA	NA
WP_013095921.1\|4089727_4089937_+	DUF1471 domain-containing protein	NA	NA	NA	NA
WP_020885164.1\|4090149_4090659_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	NA	NA	NA
WP_025204827.1\|4090655_4091723_+	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA
WP_025204828.1\|4091807_4092878_+\|tRNA	tRNA 2-selenouridine(34) synthase MnmH	NA	NA	NA	NA
WP_014168933.1\|4092949_4094095_-	porin	NA	NA	NA	NA
WP_025204829.1\|4094277_4096692_-	ABC transporter permease	NA	NA	NA	NA
4096594:4096609	attR	NA	NA	NA	NA
WP_014168931.1\|4096688_4097375_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	8.5e-33	36.4
WP_025206538.1\|4097345_4097969_+\|protease	multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1	NA	NA	NA	NA
WP_086532865.1\|4097958_4098768_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_025204830.1\|4098826_4099681_+	co-chaperone YbbN	NA	NA	NA	NA
WP_025204831.1\|4099730_4100513_-	iron export ABC transporter permease subunit FetB	NA	NA	NA	NA
WP_025204832.1\|4100505_4101177_-	iron ABC transporter ATP-binding protein FetA	G3M9Y6	Bacillus_virus	5.9e-23	33.3
WP_014168925.1\|4101394_4102309_+	SPFH/Band 7/PHB domain protein	NA	NA	NA	NA
WP_025204833.1\|4102305_4102764_+	NfeD family protein	NA	NA	NA	NA
WP_014168923.1\|4102754_4103165_-	Cu(I)-responsive transcriptional regulator	NA	NA	NA	NA
WP_025204834.1\|4103273_4105772_+	copper-exporting P-type ATPase CopA	A0A218MNH6	uncultured_virus	3.1e-109	37.0
WP_025204835.1\|4105822_4106617_+	conjugal transfer protein TraB	NA	NA	NA	NA
WP_020885175.1\|4106816_4107296_+\|tRNA	Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK	NA	NA	NA	NA

DBSCAN-SWA_10

4897780 : 4945894

Enterobacteria_phage(33.33%)

transposase,plate,integrase

attL 4894151:4894164|attR 4902317:4902330

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
4894151:4894164	attL	NA	NA	NA	NA
WP_025206271.1\|4897780_4899052_+\|integrase	integrase arm-type DNA-binding domain-containing protein	Q7M297	Enterobacteria_phage	1.0e-63	32.2
WP_025206272.1\|4899479_4900367_-	hypothetical protein	NA	NA	NA	NA
WP_025206273.1\|4900363_4901602_-	hypothetical protein	NA	NA	NA	NA
WP_025206274.1\|4901601_4902225_-	hypothetical protein	NA	NA	NA	NA
WP_025206275.1\|4902224_4905890_-	ATP-binding protein	NA	NA	NA	NA
4902317:4902330	attR	NA	NA	NA	NA
WP_025206276.1\|4906363_4909129_-	AAA family ATPase	NA	NA	NA	NA
WP_025206277.1\|4909121_4909691_-	hypothetical protein	NA	NA	NA	NA
WP_025206278.1\|4909680_4912101_-	ATPase	NA	NA	NA	NA
WP_025206280.1\|4913003_4913798_-	hypothetical protein	NA	NA	NA	NA
WP_025206281.1\|4913794_4914745_-	cation transporter	NA	NA	NA	NA
WP_025206282.1\|4914930_4915146_-	hypothetical protein	NA	NA	NA	NA
WP_025206283.1\|4915250_4915526_-	PerC family transcriptional regulator	NA	NA	NA	NA
WP_025206284.1\|4915515_4916211_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_025206285.1\|4916229_4916550_-	Dabb family protein	NA	NA	NA	NA
WP_049866896.1\|4916515_4917061_-	hypothetical protein	NA	NA	NA	NA
WP_158407516.1\|4917096_4917252_-	hypothetical protein	NA	NA	NA	NA
WP_025206286.1\|4917296_4918130_-\|transposase	IS5 family transposase	A0A0M5M147	Mycobacterium_phage	7.9e-33	37.3
WP_131631894.1\|4918534_4919059_-	hypothetical protein	NA	NA	NA	NA
WP_131631895.1\|4919052_4919340_-	hypothetical protein	NA	NA	NA	NA
WP_042866647.1\|4919685_4919952_-	PAAR repeat-containing protein	NA	NA	NA	NA
WP_025206289.1\|4919997_4920930_-	hypothetical protein	NA	NA	NA	NA
WP_025206290.1\|4920880_4922488_-	hypothetical protein	NA	NA	NA	NA
WP_025206291.1\|4922499_4923318_-	DUF4123 domain-containing protein	NA	NA	NA	NA
WP_025206292.1\|4923310_4925281_-	type VI secretion system tip protein VgrG	A0A077K8Q4	Ralstonia_phage	1.1e-27	25.3
WP_025206293.1\|4925426_4925945_-	Hcp family type VI secretion system effector	NA	NA	NA	NA
WP_042866649.1\|4926354_4927746_-	sel1 repeat family protein	NA	NA	NA	NA
WP_025206295.1\|4927745_4929164_-	membrane protein	NA	NA	NA	NA
WP_025206296.1\|4929209_4932707_-	type VI secretion system membrane subunit TssM	NA	NA	NA	NA
WP_042866243.1\|4932735_4934160_-	type VI secretion system protein TssA	NA	NA	NA	NA
WP_025203040.1\|4934159_4934702_-	hypothetical protein	NA	NA	NA	NA
WP_025206297.1\|4938847_4939624_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_025203042.1\|4939639_4940977_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_025203043.1\|4940980_4941514_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_025203044.1\|4941513_4942728_-	type VI secretion system-associated FHA domain protein TagH	NA	NA	NA	NA
WP_025206298.1\|4942730_4943729_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_025206299.1\|4943692_4945459_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_025206300.1\|4945462_4945894_-\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP006580

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection