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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP007052 Desulfurella acetivorans A63 plasmid unnamed, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP007051 Desulfurella acetivorans A63 chromosome, complete genome 3 crisprs cas6,cas8b2,cas7,cas5,cas3,cas4,cas1,cas2,DinG,c2c10_CAS-V-U3 0 5 1 0

Results visualization

1. NZ_CP007051
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP007051_1 545525-549853 Unclear NA
66 spacers
cas2,cas1,cas4,cas3,cas5,cas7,cas8b2,cas6

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP007051_2 659173-659971 Orphan NA
10 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP007051_3 1684621-1685334 Orphan NA
9 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP007051_1 1.18|546666|36|NZ_CP007051|PILER-CR,CRISPRCasFinder,CRT 546666-546701 36 NC_016585 Azospirillum lipoferum 4B plasmid AZO_p1, complete sequence 266044-266079 6 0.833
NZ_CP007051_1 1.66|549791|34|NZ_CP007051|CRISPRCasFinder,CRT 549791-549824 34 MK448573 Streptococcus satellite phage Javan610, complete genome 6677-6710 8 0.765
NZ_CP007051_1 1.66|549791|34|NZ_CP007051|CRISPRCasFinder,CRT 549791-549824 34 MK448570 Streptococcus satellite phage Javan608, complete genome 6676-6709 8 0.765
NZ_CP007051_1 1.28|547318|35|NZ_CP007051|PILER-CR,CRISPRCasFinder,CRT 547318-547352 35 MN693103 Marine virus AFVG_25M539, complete genome 9312-9346 9 0.743
NZ_CP007051_1 1.33|547641|36|NZ_CP007051|PILER-CR,CRISPRCasFinder,CRT 547641-547676 36 NZ_LR214986 Mycoplasma cynos strain NCTC10142 plasmid 13 217587-217622 9 0.75
NZ_CP007051_1 1.39|548032|35|NZ_CP007051|PILER-CR,CRISPRCasFinder,CRT 548032-548066 35 NZ_AP017978 Neochlamydia sp. S13 plasmid pS13, complete sequence 165443-165477 9 0.743
NZ_CP007051_1 1.66|549791|34|NZ_CP007051|CRISPRCasFinder,CRT 549791-549824 34 AP018319 Nostoc sp. HK-01 plasmid plasmid1 DNA, complete genome 189599-189632 9 0.735
NZ_CP007051_1 1.66|549791|34|NZ_CP007051|CRISPRCasFinder,CRT 549791-549824 34 KT895374 Bacillus phage vB_BpuM-BpSp, complete genome 166974-167007 10 0.706
NZ_CP007051_1 1.66|549791|34|NZ_CP007051|CRISPRCasFinder,CRT 549791-549824 34 NC_014502 Gloeothece verrucosa PCC 7822 plasmid Cy782203, complete sequence 43655-43688 11 0.676

1. spacer 1.18|546666|36|NZ_CP007051|PILER-CR,CRISPRCasFinder,CRT matches to NC_016585 (Azospirillum lipoferum 4B plasmid AZO_p1, complete sequence) position: , mismatch: 6, identity: 0.833

---taaaaaactaatcgatgaaatgataaaaatcggcgg	CRISPR spacer
gcttcaaaa---aatcgatgaaatgatgagaatcggcgg	Protospacer
   * ****   ***************.*.*********

2. spacer 1.66|549791|34|NZ_CP007051|CRISPRCasFinder,CRT matches to MK448573 (Streptococcus satellite phage Javan610, complete genome) position: , mismatch: 8, identity: 0.765

tgggtttttcaagaagttttacttgttttttttg	CRISPR spacer
tggttttttcaagtagttttacttgtagccatta	Protospacer
*** ********* ************  .. **.

3. spacer 1.66|549791|34|NZ_CP007051|CRISPRCasFinder,CRT matches to MK448570 (Streptococcus satellite phage Javan608, complete genome) position: , mismatch: 8, identity: 0.765

tgggtttttcaagaagttttacttgttttttttg	CRISPR spacer
tggttttttcaagtagttttacttgtagccatta	Protospacer
*** ********* ************  .. **.

4. spacer 1.28|547318|35|NZ_CP007051|PILER-CR,CRISPRCasFinder,CRT matches to MN693103 (Marine virus AFVG_25M539, complete genome) position: , mismatch: 9, identity: 0.743

tcattacatatttagatgaatctgttattaaacca	CRISPR spacer
ctattacatctttagatgattctgttagattagca	Protospacer
..******* ********* *******    * **

5. spacer 1.33|547641|36|NZ_CP007051|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR214986 (Mycoplasma cynos strain NCTC10142 plasmid 13) position: , mismatch: 9, identity: 0.75

gataacataaattttaaattattttgatttgtaatt	CRISPR spacer
tgcaaaataaattttgaattattttgatttttctta	Protospacer
 ..** *********.************** *  * 

6. spacer 1.39|548032|35|NZ_CP007051|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP017978 (Neochlamydia sp. S13 plasmid pS13, complete sequence) position: , mismatch: 9, identity: 0.743

gacgatttttactgttttattagtttttttatttt	CRISPR spacer
atagttttttacttttttattattttttttctgat	Protospacer
.  * ******** ******** ******* *  *

7. spacer 1.66|549791|34|NZ_CP007051|CRISPRCasFinder,CRT matches to AP018319 (Nostoc sp. HK-01 plasmid plasmid1 DNA, complete genome) position: , mismatch: 9, identity: 0.735

tgggttt---ttcaagaagttttacttgttttttttg	CRISPR spacer
---gttcataatcaataagttttccttgtttttttaa	Protospacer
   ***.    **** ******* *********** .

8. spacer 1.66|549791|34|NZ_CP007051|CRISPRCasFinder,CRT matches to KT895374 (Bacillus phage vB_BpuM-BpSp, complete genome) position: , mismatch: 10, identity: 0.706

tgggtttttcaagaagttttacttgttttttttg	CRISPR spacer
aaattttttcaacaagttttccttgtttcatatt	Protospacer
 .. ******** ******* *******. * * 

9. spacer 1.66|549791|34|NZ_CP007051|CRISPRCasFinder,CRT matches to NC_014502 (Gloeothece verrucosa PCC 7822 plasmid Cy782203, complete sequence) position: , mismatch: 11, identity: 0.676

tgggtttttcaagaagttttacttgttttttttg	CRISPR spacer
ttaaaaaatcaagcatttttacttgtttttttct	Protospacer
* ..    ***** * ****************. 

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1680558 : 1693619 12 Staphylococcus_phage(40.0%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage