CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
NZ_CP006027	Escherichia coli O145:H28 str. RM13514 chromosome, complete genome	6 crisprs	DinG,cas3,DEDDh,c2c9_V-U4,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,RT,PrimPol,PD-DExK	7	19
NZ_CP006028	Escherichia coli O145:H28 str. RM13514 plasmid pO145-13514, complete sequence	0 crisprs	NA	0	1
NZ_CP006029	Escherichia coli O145:H28 str. RM13514 plasmid pRM13514, complete sequence	0 crisprs	DEDDh	0	1

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP006027_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP006027_1

2904191-2904322

Orphan

Consensus_repeat	Method
CTCGGTTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP006027_1

>merge|NZ_CP006027|1|2904191-2904322|CRISPRCasFinder
CTCGGTTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCTCCGGGTGCCGGATGCAGCGTGAACGCCTTATCCGGCCTACGACTCGGATTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGC

>NZ_CP006027|1|1|2904191-2904322|CRISPRCasFinder
CTCGGTTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGC	TCCGGGTGCCGGATGCAGCGTGAACGCCTTATCCGGCCTACGAC
TCGGATTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP006027.1\|WP_001400670.1\|2891317_2891941_-\|DUF1175-domain-containing-protein	unknown	unknown	gnl\|CDD\|225774
NZ_CP006027.1\|WP_001075170.1\|2901859_2904145_+\|ribonucleoside-diphosphate-reductase-subunit-alpha	unknown	unknown	gnl\|CDD\|181649
NZ_CP006027.1\|WP_001249109.1\|2877686_2880359_+\|phosphotransferase-RcsD	unknown	unknown	gnl\|CDD\|236726
NZ_CP006027.1\|WP_000176730.1\|2907902_2908781_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223656
NZ_CP006027.1\|WP_000179249.1\|2905508_2905763_+\|ferredoxin-like-diferric-tyrosyl-radical-cofactor-maintenance-protein-YfaE	unknown	unknown	gnl\|CDD\|182668
NZ_CP006027.1\|WP_000948724.1\|2909909_2911268_-\|glycerol-3-phosphate-transporter	unknown	unknown	gnl\|CDD\|236889
NZ_CP006027.1\|WP_000301025.1\|2905816_2906467_-\|lipopolysaccharide-kinase-InaA	unknown	unknown	gnl\|CDD\|182136
NZ_CP006027.1\|WP_000857279.1\|2911540_2913169_+\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-A	unknown	unknown	gnl\|CDD\|236847
NZ_CP006027.1\|WP_001220054.1\|2897411_2901164_-\|AIDA-I-family-autotransporter-adhesin-YfaL/EhaC	unknown	unknown	gnl\|CDD\|182059
NZ_CP006027.1\|WP_001281218.1\|2893774_2896402_-\|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-A	unknown	unknown	gnl\|CDD\|235502
NZ_CP006027.1\|WP_025404413.1\|2891937_2893626_-\|DUF2138-domain-containing-protein	unknown	unknown	gnl\|CDD\|227030
NZ_CP006027.1\|WP_001209871.1\|2913158_2914418_+\|glycerol-3-phosphate-dehydrogenase-subunit-GlpB	unknown	unknown	gnl\|CDD\|225617
NZ_CP006027.1\|WP_000876005.1\|2881225_2884075_-\|two-component-system-sensor-histidine-kinase-RcsC	unknown	unknown	gnl\|CDD\|182772
NZ_CP006027.1\|WP_000990768.1\|2896548_2897271_+\|bifunctional-3-demethylubiquinone-3-O-methyltransferase/2-octaprenyl-6-hydroxy-phenol-methylase	unknown	unknown	gnl\|CDD\|235350
NZ_CP006027.1\|WP_001061917.1\|2880375_2881026_+\|transcriptional-regulator-RcsB	unknown	unknown	gnl\|CDD\|182771
NZ_CP006027.1\|WP_001000396.1\|2914414_2915605_+\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-C	unknown	unknown	gnl\|CDD\|132422
NZ_CP006027.1\|WP_000779088.1\|2908825_2909905_-\|glycerophosphodiester-phosphodiesterase	unknown	unknown	gnl\|CDD\|236859
NZ_CP006027.1\|WP_000332037.1\|2904378_2905509_+\|ribonucleotide-diphosphate-reductase-subunit-beta	unknown	unknown	gnl\|CDD\|181647
NZ_CP006027.1\|WP_001225855.1\|2884349_2885126_-\|YfaP-family-protein	unknown	unknown	gnl\|CDD\|227021
NZ_CP006027.1\|WP_000660233.1\|2906547_2907738_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|341042

Protein	Function_ID	Function_description	E-value
NZ_CP006027.1\|WP_001400670.1\|2891317_2891941_-\|DUF1175-domain-containing-protein	gnl\|CDD\|225774	COG3234, COG3234, Uncharacterized protein conserved in bacteria [Function unknown].	1.01443e-139
NZ_CP006027.1\|WP_001075170.1\|2901859_2904145_+\|ribonucleoside-diphosphate-reductase-subunit-alpha	gnl\|CDD\|181649	PRK09103, PRK09103, ribonucleoside-diphosphate reductase subunit alpha.	0
NZ_CP006027.1\|WP_001249109.1\|2877686_2880359_+\|phosphotransferase-RcsD	gnl\|CDD\|236726	PRK10618, PRK10618, phosphotransfer intermediate protein in two-component regulatory system with RcsBC; Provisional.	0
NZ_CP006027.1\|WP_000176730.1\|2907902_2908781_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|223656	COG0583, LysR, Transcriptional regulator [Transcription].	1.04797e-45
NZ_CP006027.1\|WP_000179249.1\|2905508_2905763_+\|ferredoxin-like-diferric-tyrosyl-radical-cofactor-maintenance-protein-YfaE	gnl\|CDD\|182668	PRK10713, PRK10713, 2Fe-2S ferredoxin-like protein.	3.13987e-52
NZ_CP006027.1\|WP_000948724.1\|2909909_2911268_-\|glycerol-3-phosphate-transporter	gnl\|CDD\|236889	PRK11273, glpT, glycerol-3-phosphate transporter.	0
NZ_CP006027.1\|WP_000301025.1\|2905816_2906467_-\|lipopolysaccharide-kinase-InaA	gnl\|CDD\|182136	PRK09902, PRK09902, lipopolysaccharide kinase InaA.	1.32167e-158
NZ_CP006027.1\|WP_000857279.1\|2911540_2913169_+\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-A	gnl\|CDD\|236847	PRK11101, glpA, anaerobic glycerol-3-phosphate dehydrogenase subunit A.	0
NZ_CP006027.1\|WP_001220054.1\|2897411_2901164_-\|AIDA-I-family-autotransporter-adhesin-YfaL/EhaC	gnl\|CDD\|182059	PRK09752, PRK09752, AIDA-I family autotransporter YfaL.	0
NZ_CP006027.1\|WP_001281218.1\|2893774_2896402_-\|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-A	gnl\|CDD\|235502	PRK05560, PRK05560, DNA gyrase subunit A; Validated.	0
NZ_CP006027.1\|WP_025404413.1\|2891937_2893626_-\|DUF2138-domain-containing-protein	gnl\|CDD\|227030	COG4685, COG4685, Uncharacterized protein conserved in bacteria [Function unknown].	0
NZ_CP006027.1\|WP_001209871.1\|2913158_2914418_+\|glycerol-3-phosphate-dehydrogenase-subunit-GlpB	gnl\|CDD\|225617	COG3075, GlpB, Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism].	0
NZ_CP006027.1\|WP_000876005.1\|2881225_2884075_-\|two-component-system-sensor-histidine-kinase-RcsC	gnl\|CDD\|182772	PRK10841, PRK10841, two-component system sensor histidine kinase RcsC.	0
NZ_CP006027.1\|WP_000990768.1\|2896548_2897271_+\|bifunctional-3-demethylubiquinone-3-O-methyltransferase/2-octaprenyl-6-hydroxy-phenol-methylase	gnl\|CDD\|235350	PRK05134, PRK05134, bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG.	1.54094e-171
NZ_CP006027.1\|WP_001061917.1\|2880375_2881026_+\|transcriptional-regulator-RcsB	gnl\|CDD\|182771	PRK10840, PRK10840, transcriptional regulator RcsB; Provisional.	2.27775e-154
NZ_CP006027.1\|WP_001000396.1\|2914414_2915605_+\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-C	gnl\|CDD\|132422	TIGR03379, glycerol3P_GlpC, glycerol-3-phosphate dehydrogenase, anaerobic, C subunit. Members of this protein family are the membrane-anchoring, non-catalytic C subunit, product of the glpC gene, of a three-subunit, FAD-dependent, anaerobic glycerol-3-phosphate dehydrogenase. GlpC lasks classical hydrophobic transmembrane helices; Cole, et al suggest interaction with the membrane may involve amphipathic helices. GlcC has conserved Cys-containing motifs suggestive of iron-sulfur binding. This complex is found mostly in Escherichia coli and closely related species. [Energy metabolism, Anaerobic].	0
NZ_CP006027.1\|WP_000779088.1\|2908825_2909905_-\|glycerophosphodiester-phosphodiesterase	gnl\|CDD\|236859	PRK11143, glpQ, glycerophosphodiester phosphodiesterase; Provisional.	0
NZ_CP006027.1\|WP_000332037.1\|2904378_2905509_+\|ribonucleotide-diphosphate-reductase-subunit-beta	gnl\|CDD\|181647	PRK09101, nrdB, ribonucleotide-diphosphate reductase subunit beta; Reviewed.	0
NZ_CP006027.1\|WP_001225855.1\|2884349_2885126_-\|YfaP-family-protein	gnl\|CDD\|227021	COG4676, COG4676, Uncharacterized protein conserved in bacteria [Function unknown].	3.30839e-153
NZ_CP006027.1\|WP_000660233.1\|2906547_2907738_-\|MFS-transporter	gnl\|CDD\|341042	cd17489, MFS_YfcJ_like, Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily. This subfamily is composed of Escherichia coli membrane proteins, YfcJ and YhhS, Bacillus subtilis uncharacterized MFS-type transporter YwoG, and similar proteins. YfcJ and YhhS are putative arabinose efflux transporters. YhhS has been implicated glyphosate resistance. YfcJ-like arabinose efflux transporters belong to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.77475e-99

>NZ_CP006027.1|WP_001075170.1|2901859_2904145_+|ribonucleoside-diphosphate-reductase-subunit-alpha
MNQNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINSLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDAIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDLVPSIQDDGCESGACKI
>NZ_CP006027.1|WP_001220054.1|2897411_2901164_-|AIDA-I-family-autotransporter-adhesin-YfaL/EhaC
MRIIFLRKEYLSLLPSMIASLFSANGVAAAIDLCQGYDIKASCHASRQSLSGITQVWSIADGQWLVFSDMTNNASGGAVFLQQGAEFTLSPENETGMTLFANNTVSGEYNNGGAIFAKENSTLNLTDVIFSGNVAGGYGGAIYSSGTNDTGAIDLRVTNAVFRNNIANDGKGGAIYTINNDIYLSDDVFNNNQAYTSTSYSDGDGGAIDVTDNNSDSKHPSGYTIINNTAFTNNTAEGYGGAIYTNSATAPYLIDISVDDSYSQNGGVLVDENNSAAGYGDGPSSAAGGFMYLGLSEVTFDIADGKTLVIGNTENDGAVDSIAGTGVITKTGSGDLVLNADNNDFTGEMQIENGEVTLGRSNSLMNVGDTHCQDDPQDCYGLTIGSIDKYQNQAELNVGSTQQTFVHSLTGFQNGTLNIDAGGNVTVNQGSFAGTIEGAGQLTIAQNGSYVLAGAQSMALTGDIVVDAGAVLSLEGDAADLAALQDDPQSIVLNGGVLDLSDFATWQSGTSYNDGLAVSGSGGTVIGSQDVVDLAGGDNLHIGGDGKDGVYVVIDAGDGLVSLANNNSYLGTTQIASGTLMVSDNSQLGDTHYNRQVIFTDKPQESVMEITANVDTRSTTTEHGRDIEMRADGEVAVDAGVDTQWGALMADSSGQHQDEGSTLTKTGAGTLELTASGTTQSAVRVEEGTLKGDVADILPYASSLWVGDGATFVTGADQDIQSIDAISSGTIDISDGTVLRLTGQDTSVALNASLFNGDGTLVNATDGVTLTGELNTNLETDSLTYLSNVTVNGNLTNTSGAVSLQNGVAGDTLTVNGDYTGGGTLLFDSELNGDDSASDQLVLNGNTAGNTTVVVNSITGIGEPTSTGIKVVDFAADPTQFQNNAQFSLAGSGYVNMGAYDYTLVEDNNDWYLRSQEVTPPSPPDPDPTPDPDPTPDPDPTPAPEPTPAYQPVLNAKVGGYLNNLRAANQAFMMERRDHAGGDGQTLNLRVIGGDYHYTAAGQLAQHEDTSTVQLSGDLFSGRWGTDGEWMLGIVGGYSDNQGDSRSSMTGTRADNQNHGYAVGLTSSWFQHGKQKQGAWLDNWLQYAWFSNDVSEHEDGVDHYHSSGIIASLEAGYQWLPGRGVVIEPQAQVIYQGVQQDDFTAANRARVSQSQGDDIQTRLGLHSEWRTAVHVIPTLDLNYYHDPHSTEIEEDGSTISDDAVKQRGEIKVGVTGNISQRVSLRGSVAWQKGSDDFAQTAGFLSMTVKW
>NZ_CP006027.1|WP_000990768.1|2896548_2897271_+|bifunctional-3-demethylubiquinone-3-O-methyltransferase/2-octaprenyl-6-hydroxy-phenol-methylase
MNAEKSPVNHNVDHEEIAKFEAVASRWWDLEGEFKPLHRINPLRLGYIAERAGGLFGKKVLDVGCGGGILAESMAREGATVTGLDMGFEPLQVAKLHALESGIQVDYVQETVEEHAAKHAGQYDVVTCMEMLEHVPDPQSVVRACAQLVKPGGDVFFSTLNRNGKSWLMAVVGAEYILRMVPKGTHDVKKFIKPAELLGWVDQTSLKERHMTGLHYNPITNSFKLGPGVDVNYMLHTQNK
>NZ_CP006027.1|WP_001281218.1|2893774_2896402_-|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-A
MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWNKAYKKSARVVGDVIGKYHPHGDLAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAMRYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMATNIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKVYIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDGMRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRREVVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNVAAMLERAGDDAARPEWLEPEFGVRDGLYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYKELLDQIAELLRILGSADRLMEVIREELELVREQFGDKRRTEITANSADINLEDLITQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVSLIVPRGDGAILTATQNGYGKRTAVAEYPTKSRATKGVISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTAEDENVVGLQRVAEPVDEEDLDTIDGSAAEGDDEIAPEVDVDDEPEEE
>NZ_CP006027.1|WP_025404413.1|2891937_2893626_-|DUF2138-domain-containing-protein
MSGEKKAKGWRFYGLVGFGAIALLSAGVWALQYAGSGPEKTLSPLVVHNNLQIDLNEPDLFLDSDSLSQLPKDLLTIPFLHDVLSEDFVFYYQNHADRLGIEGSIRRIVYEHDLTLKDKLFSSLLDQPALAALWHDKQGHLSHYMVLIQRSGLSKLLEPLLFAATSDSQLNKTEISSIKINSETIPVYQLRYNGNNALMFATYQDKMLVFSSTDMLFKDDQQDTEATAIASDLLSGNKRWQASFGLEERAAEKTPVRQRIVASARLLGFGYQRLMPSFAGVRFEMGNDGWHSFLALNDESASVDASFDFTPVWNSMPAGATFCVAVPYSHGIAEEMLSLISQENDKLNGALDGAAGLCWYADSKLQTPLFVGQFDGTAEQAQLPGKLFTQNIGAHESKAPEGVLPVSQTQQGEAQIWRREVSSRYGQYPKAQAAQPDQLMSDYFFRVSLAMQNKTLLFSLDDTLVNNALQTLNKTRTAMVDVIPTDGIVPLYINPQGVAKLLRNETLTSLPKNLEPVFYNAAQTLLMPKLDALSQQPRYVMKLAQMEPGAAWQWLPITWQPL
>NZ_CP006027.1|WP_001400670.1|2891317_2891941_-|DUF1175-domain-containing-protein
MRNGLLALICWLCCVVAHSEMLNVEQSGLFRAWFVRIAQEQLRQGPSPRWYQQDCAGLVRFAANETLKVHDSKWLKSNGLSSQYLPPEMTLTPEQRQLAQNWNQGNGKTGPYVTAINLIQYNSQFIGQDINQALPGDMIFFDQGDAQHLMVWMGRYVIYHTGSATKTDNGMRAVSLQQLMTWKDTRWIPNDSNPNFIGIYRLNFLAR
>NZ_CP006027.1|WP_001225855.1|2884349_2885126_-|YfaP-family-protein
MRKIFLPLLLVALSPVAHSEGVQEVEIDAPLSGWHPAEGEDASFSQSINYPASSVNMADDQNISAQIRGKIKNYAAAGKVQQGRLVVNGASMPQRIESDGSFARPYIFTEGSNSVQVISPDGQSRQKMQFYSTPGTGTIRARLRLVLSWDTDNTDLDLHVVTPDGEHAWYGNTVLKNSGALDMDVTTGYGPEIFAMPAPVHGRYQVYINYYGGRSETELTTAQLTLITDEGSVNEKQETFIVPMRNAGELTLVKSFDW
>NZ_CP006027.1|WP_000876005.1|2881225_2884075_-|two-component-system-sensor-histidine-kinase-RcsC
MKYLASFRTTLKASRYMFRALALVLWLLIAFSSVFYIVNALHQRESEIRQEFNLSSDQAQRFIQRTSDVMKELKYIAENRLSAENGVLSPRGRETQADVPAFEPLFADSDCSAMSNTWRGSLESLAWFMRYWRDNFSAAYDLNRVFLIGSDNLCMANFGLRDMPVERDTALKALHERINKYRNAPQDDSGSNLYWISEGPRPGVGYFYALTPVYLANRLQALLGVEQTIRMENFFLPGTLPMGVTILDENGHTLISLTGPESKIKGDPRWMQERSWFGYTEGFRELVLKKNLPPSSLSIVYSVPVDKVLERIRMLILNAILLNVLAGAALFTLARMYERRIFIPAESDALRLEEHEQFNRKIVASAPVGICILRTADGVNILSNELAHTYLNMLTHEDRQRLTQIICGQQVNFVDVLTSNNTNLQISFVHSRYRNENVAICVLVDVSSRVKMEESLQEMAQAAEQASQSKSMFLATVSHELRTPLYGIIGNLDLLQTKELPKGVDRLVTAMNNSSSLLLKIISDILDFSKIESEQLKIEPREFSPREVMNHITANYLPLVVRKQLGLYCFIEPDVPVALNGDPMRLQQVISNLLSNAIKFTDTGCIVLHVRADGDYLSIRVRDTGVGIPAKEVVRLFDPFFQVGTGVQRNFQGTGLGLAICEKLISMMDGDISVDSEPGMGSQFTVRIPLYGAQYPQKKGVEGLSCKRCWLAVRNASLCQFLETSLQRSGIVVTTYEGQEPTPEDVLITDEVVSKKWQGRAVVTFCRRHIGIPLEKAPGEWVHSVAAPHELPALLARIYLIEMESDDPANALPSTGKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLSKNHIDIVLSDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTLDVIKQTLTVYAERVRKSRES
>NZ_CP006027.1|WP_001061917.1|2880375_2881026_+|transcriptional-regulator-RcsB
MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPADKD
>NZ_CP006027.1|WP_001249109.1|2877686_2880359_+|phosphotransferase-RcsD
MRQKETTATTRFSLLPGSITRFFLLLIIVLLVTMGVMVQSAVNAWLKDKSYQIVDITHAIQKRVDTWRYVTWQIYDNIAATTSPSSGEGLQETRLKQDVYYLEKPRRKTEALIFGSHDNSTLEMTQRMSTYLDTLWGAENVPWSMYYLNGQDNSLVLISTLPLKDLTSGFKESTVSDIVDSRRAEMLQQANALDERESFSNMRRLAWQNGHYFTLRTTFNQPGHLATVVAFDLPINDLIPPGMPLDSFRLEPDATATGDNDNEKEGTDSVSIHFNSTKIEISSALNSTDMRLVWQVPYGTLLLDTLQNILLPLLLNIGLLALALFGYTTFRHFSSRSTESLPNTAVNNELRILRAINEEIVSLLPLGLLVHDQESNRTVISNKIADHLLPHLNLQNITTMAEQHQGIIQATINNELYEIRMFRSQVAPRTQIFIIRDQDREVLVNKKLKQAQRLYEKNQQGRMTFMKNIGDALKEPAQSLAESAAKLNAPESKQLANQADVLVRLVDEIQLANMLADDSWKSETVLFSVQDLIDEVVPSVLPAIKRKGLQLLINNHLKAHDMRRGDRDALRRILLLLMQYAVTSTQLGKITLEVDQDESSEDRLTFRILDTGEGVSIHEMDNLHFPFINQTQNDRYGKADPLAFWLSDQLARKLGGHLNIKTRDGLGTRYSVHIKMLAADPEVEEEEERLLDDVCVMVDVTSAEIRNIVTRQLENWGATCITPDERLISQDYDIFLTDNPSNLTASGLLLSDDESGVREIGPGQLCVNFNMSNAMQEAVLQLIEVQLAQEEVTESPLGGDENAQLHASGYYALFVDTVPDDVKRLYTEAATSDFAALAQTAHRLKGVFAMLNLVPGKQLCETLEHLIREKDVPGIEKYISDIDSYVKSLL
>NZ_CP006027.1|WP_000332037.1|2904378_2905509_+|ribonucleotide-diphosphate-reductase-subunit-beta
MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDLSNFQL
>NZ_CP006027.1|WP_000179249.1|2905508_2905763_+|ferredoxin-like-diferric-tyrosyl-radical-cofactor-maintenance-protein-YfaE
MASVTLRITGTQLLCQDEHPSLLAALESHNVAVEYQCREGYCGSCRTRLVAGQVDWIAEPLAFIQPGEILPCCCRAKGDIEIEL
>NZ_CP006027.1|WP_000301025.1|2905816_2906467_-|lipopolysaccharide-kinase-InaA
MAVSAKHDEFNHWWATEGDWVEEPNYRRNGMSGVQCVERNGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVTEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSINRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRRRLRRDKAINHDFRQLEKYLEPIPKADWEQVKAYYYAM
>NZ_CP006027.1|WP_000660233.1|2906547_2907738_-|MFS-transporter
MKEKLWTKDFWAITIISFIIFFVFYVLLTLLPIYISDRLQASPDKAGLLVTLFLIAAIVIRPFAGQWVSKYSNKTILVLSSLAFLVVTALYPFCHSIESLLFIRVLHGITFGVITTVKGTISARLIPASRRGEGISFFSLAMGLAMVVGPWIGLNMARWEAFNMAFWLCTGVAAVGIILSLIMTVPPVISHADGSKPKMGFAAMFDRAALPFAMVTFFMTFSYAGVSAFLALYARELNLMSAASNFLLCYAIFLMICRTFTGNVCDKKGPKYVVYPCLLFFTVGLVVLGYTQGSVMMVVSCALIGIGYGSVTPVFQTQIISSVEPHKIGVANSLFFNAMDAGLALGACVMGMMVAHTGYQMIYLLGALLVVVAGGVYALQMKGKSGVALVVAKEIH
>NZ_CP006027.1|WP_000176730.1|2907902_2908781_+|LysR-family-transcriptional-regulator
MTLTQIHTLLAVLDYGGFTEASKRLFMTQSAVSQAIATLEQELGVEILIRERRKALQLTDAGSRIASHLRAITREVNAVKEIAEQEKHNPTRTLRIGCFPSACACILPGIIRYFETYHPQIKIIPYEENSSEIIDSVQNETIDAGFVHFPVTGMYSVPVYQDKFTVVLPDAHPLAKNNAISVEELVGEPLIISKGRYELSIMALFKEKNITPVIKYEFNHPDTAISFIRQGLGIALLPELTLKAVAGELCSVPLEPTFYRQISLLVKEAPVEGSPLFLLQMCMETLVVKGIL
>NZ_CP006027.1|WP_000779088.1|2908825_2909905_-|glycerophosphodiester-phosphodiesterase
MKLTLKNLSMAIMMSTIVMGSSAMAADSNEKIVIAHRGASGYLPEHTLPAKAMAYAQGADYLEQDLVMTKDDHLVVLHDHYLDRVTDVADRFPDRARKDGRYYAIDFTLDEIKSLKFTEGFDIENGKKVQTYPGRFPMGKSDFRVHTFEEEIEFVQGLNHSTGKNIGIYPEIKAPWFHHQEGKDIAAKTLEVLKKYGYTGKDDKVYLQCFDADELKRIKNELEPKMGMDLNLVQLIAYTDWNETQQKQPDGSWVNYNYDWMFKPGVMKQVAEYADGIGPDYHMLIEETSQPGNIKLTGMVQDAQQNKLVVHPYTVRSDKLPEYTTDVNQLYDALYNKAGVNGLFTDFPDKAVKFLHKDN
>NZ_CP006027.1|WP_000948724.1|2909909_2911268_-|glycerol-3-phosphate-transporter
MLSIFKPAPHKARLPAAEIDPTYRRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKAEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFFYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEKRRHQELLQKRNGG
>NZ_CP006027.1|WP_000857279.1|2911540_2913169_+|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-A
MKTRDSQSSDVIIIGGGATGAGIARDCALRGLRVILVERHDIATGATGRNHGLLHSGARYAVTDAESARECISENQILKRIARHCVEPTNGLFITLQEDDLSFQATFIRACEEAGISAEAIDPQQARIIEPAVNPALIGAVKVPDGTVDPFRLTAANMLDAKEHGAVILTAHEVTGLIREGATVCGVRVRNHLTGETQALHAPVVVNAAGIWGQHIAEYADLRIRMFPAKGSLLIMDHRINQHVINRCRKPSDADILVPGDTISLIGTTSLRIDYNEIDDNRVTAEEVDILLREGEKLAPVMAKTRILRAYSGVRPLVASDDDPSGRNVSRGIVLLDHAERDGLDGFITITGGKLMTYRLMAEWATDAVCRKLGNTRPCTTADLALPGSQEPAEVTLRKVISLPAPLRGSAVYRHGDRTPAWLSEGRLHRSLVCECEAVTAGEVQYAVENLNVNSLLDLRRRTRVGMGTCQGELCACRAAGLLQRFNVTTSAQSIEQLSTFLNERWKGVQPIAWGDALRESEFTRWVYQGLCGLEKEQKDAL
>NZ_CP006027.1|WP_001209871.1|2913158_2914418_+|glycerol-3-phosphate-dehydrogenase-subunit-GlpB
MRFDTIIMGGGLAGLLCGLQLQKHGLRCAIVTRGQSALHFSSGSLDLLSHLPDGQAVTDIHSGLESLRQQAPAHPYSLLGPQRVLDLACQAQALIAESGAQLQGSVELAHQRVTPLGTLRSTWLSSPEVPVWPLPAKKICVVGISGLMDFQAHLAAASLRELGLAVETAEIELPELDVLRNNATEFRAVNIARFLDNEENWPLLLDALIPVANTCEMILMPACFGLADDKLWRWLNEKLPCSLMLLPTLPPSVLGIRLQNQLQRQFVRQGGVWMPGDEVKKVTCKNGVVNEIWTRNHADIPLRPRFAVLASGSFFSGGLVAERNGIREPILGLDVLQTATRGEWYKGDFFAPQPWQQFGVTTDKTLRPSQAGQTIENLFAIGSVLGGFDPIAQGCGGGVCAVSALHAAQQIAQRAGGQQ
>NZ_CP006027.1|WP_001000396.1|2914414_2915605_+|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-C
MNDTSFENCIKCTVCTTACPVSWVNPGYPGPKQAGPDGERLRLKDGALYDEALKYCINCKRCEVACPSDVKIGDIIQRARAKYDTTRPSLRNFVLSHTDLMGSVSTPFAPIVNTATSLKPVRQLLDAALKIDHRRTLPKYSFGTFRRWYRSVAAQQAQYKDQVAFFHGCFVNYNHPQLGKDLIKVLNAMGTGVQLLSKEKCCGVPLIANGFTDKARKQAITNVESIREAVGVKGIPVIATSSTCTFALRDEYPEVLNVDNKGLRDHIELATRWLWRKLDEGKTLPLKPLPLKVVYHTPCHMEKMGWTLYTLELLRNIPGLELTVLDSQCCGIAGTYGFKKENYPTSQAIGAPLFRQIEESGADLVVTDCETCKWQIEMSTSLRCEHPITLLAQALA

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Crispr_ID: NZ_CP006027_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP006027_2

2985523-2985648

Orphan

Consensus_repeat	Method
TGTCGGATGCGGCGTAAACGCCTTATCCGACCTAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP006027_2

>merge|NZ_CP006027|2|2985523-2985648|CRISPRCasFinder
TGTCGGATGCGGCGTAAACGCCTTATCCGACCTACAGTTCTAACCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTAAACGCCTTATCCGACCTAC

>NZ_CP006027|2|2|2985523-2985648|CRISPRCasFinder
TGTCGGATGCGGCGTAAACGCCTTATCCGACCTAC	AGTTCTAACCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAACGGC
TGTCGGATGCGGCGTAAACGCCTTATCCGACCTAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP006027.1\|WP_000262113.1\|2984869_2985358_-\|colicin-V-production-protein	unknown	unknown	gnl\|CDD\|182773
NZ_CP006027.1\|WP_001283590.1\|2989509_2990322_-\|tRNA-pseudouridine(38-40)-synthase-TruA	unknown	unknown	gnl\|CDD\|234577
NZ_CP006027.1\|WP_000118404.1\|2987697_2988612_-\|acetyl-CoA-carboxylase,-carboxyltransferase-subunit-beta	unknown	unknown	gnl\|CDD\|235547
NZ_CP006027.1\|WP_000737621.1\|2980601_2981384_-\|histidine-ABC-transporter-substrate-binding-protein-HisJ	unknown	unknown	gnl\|CDD\|185334
NZ_CP006027.1\|WP_000364335.1\|2988767_2989427_-\|DedA-family-protein	unknown	unknown	gnl\|CDD\|182775
NZ_CP006027.1\|WP_000699113.1\|2991400_2992537_-\|4-phosphoerythronate-dehydrogenase-PdxB	unknown	unknown	gnl\|CDD\|185335
NZ_CP006027.1\|WP_000965518.1\|2979825_2980512_-\|histidine-ABC-transporter-permease-HisQ	unknown	unknown	gnl\|CDD\|185089
NZ_CP006027.1\|WP_000748251.1\|2981604_2982387_-\|lysine/arginine/ornithine-ABC-transporter-substrate-binding-protein-ArgT	unknown	unknown	gnl\|CDD\|184972
NZ_CP006027.1\|WP_000127796.1\|2993627_2994806_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|183487
NZ_CP006027.1\|WP_001028352.1\|2976303_2977197_+\|TIGR01777-family-protein	unknown	unknown	gnl\|CDD\|224015
NZ_CP006027.1\|WP_000817178.1\|2995080_2996301_-\|beta-ketoacyl-ACP-synthase-I	unknown	unknown	gnl\|CDD\|181184
NZ_CP006027.1\|WP_000334220.1\|2983315_2984833_-\|amidophosphoribosyltransferase	unknown	unknown	gnl\|CDD\|236427
NZ_CP006027.1\|WP_000825700.1\|2982651_2983221_-\|flavin-prenyltransferase-UbiX	unknown	unknown	gnl\|CDD\|235677
NZ_CP006027.1\|WP_000615820.1\|2992635_2993631_+\|flagella-biosynthesis-regulator-Flk	unknown	unknown	gnl\|CDD\|182670
NZ_CP006027.1\|WP_001289160.1\|2990321_2991335_-\|aspartate-semialdehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|181205
NZ_CP006027.1\|WP_001293604.1\|2978331_2979105_-\|histidine-ABC-transporter-ATP-binding-protein-HisP	unknown	unknown	gnl\|CDD\|182592
NZ_CP006027.1\|WP_000569958.1\|2979112_2979829_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|185029
NZ_CP006027.1\|WP_000157003.1\|2985707_2986370_-\|cell-division-protein-DedD	unknown	unknown	gnl\|CDD\|236940
NZ_CP006027.1\|WP_000156141.1\|2977244_2978135_-\|recombination-promoting-nuclease-RpnB	unknown	unknown	gnl\|CDD\|182117
NZ_CP006027.1\|WP_000584555.1\|2986359_2987628_-\|bifunctional-tetrahydrofolate-synthase/dihydrofolate-synthase	unknown	unknown	gnl\|CDD\|182774

Protein	Function_ID	Function_description	E-value
NZ_CP006027.1\|WP_000262113.1\|2984869_2985358_-\|colicin-V-production-protein	gnl\|CDD\|182773	PRK10845, PRK10845, colicin V production protein; Provisional.	9.93182e-101
NZ_CP006027.1\|WP_001283590.1\|2989509_2990322_-\|tRNA-pseudouridine(38-40)-synthase-TruA	gnl\|CDD\|234577	PRK00021, truA, tRNA pseudouridine(38-40) synthase TruA.	1.01352e-148
NZ_CP006027.1\|WP_000118404.1\|2987697_2988612_-\|acetyl-CoA-carboxylase,-carboxyltransferase-subunit-beta	gnl\|CDD\|235547	PRK05654, PRK05654, acetyl-CoA carboxylase carboxyltransferase subunit beta.	0
NZ_CP006027.1\|WP_000737621.1\|2980601_2981384_-\|histidine-ABC-transporter-substrate-binding-protein-HisJ	gnl\|CDD\|185334	PRK15437, PRK15437, histidine ABC transporter substrate-binding protein HisJ; Provisional.	0
NZ_CP006027.1\|WP_000364335.1\|2988767_2989427_-\|DedA-family-protein	gnl\|CDD\|182775	PRK10847, PRK10847, DedA family protein.	8.76489e-156
NZ_CP006027.1\|WP_000699113.1\|2991400_2992537_-\|4-phosphoerythronate-dehydrogenase-PdxB	gnl\|CDD\|185335	PRK15438, PRK15438, erythronate-4-phosphate dehydrogenase PdxB; Provisional.	0
NZ_CP006027.1\|WP_000965518.1\|2979825_2980512_-\|histidine-ABC-transporter-permease-HisQ	gnl\|CDD\|185089	PRK15135, PRK15135, histidine ABC transporter permease HisQ.	1.2108e-150
NZ_CP006027.1\|WP_000748251.1\|2981604_2982387_-\|lysine/arginine/ornithine-ABC-transporter-substrate-binding-protein-ArgT	gnl\|CDD\|184972	PRK15010, PRK15010, lysine/arginine/ornithine ABC transporter substrate-binding protein ArgT.	3.42159e-173
NZ_CP006027.1\|WP_000127796.1\|2993627_2994806_-\|MFS-transporter	gnl\|CDD\|183487	PRK12382, PRK12382, putative transporter; Provisional.	0
NZ_CP006027.1\|WP_001028352.1\|2976303_2977197_+\|TIGR01777-family-protein	gnl\|CDD\|224015	COG1090, COG1090, Predicted nucleoside-diphosphate sugar epimerase [General function prediction only].	1.20568e-179
NZ_CP006027.1\|WP_000817178.1\|2995080_2996301_-\|beta-ketoacyl-ACP-synthase-I	gnl\|CDD\|181184	PRK07967, PRK07967, beta-ketoacyl-ACP synthase I.	0
NZ_CP006027.1\|WP_000334220.1\|2983315_2984833_-\|amidophosphoribosyltransferase	gnl\|CDD\|236427	PRK09246, PRK09246, amidophosphoribosyltransferase; Provisional.	0
NZ_CP006027.1\|WP_000825700.1\|2982651_2983221_-\|flavin-prenyltransferase-UbiX	gnl\|CDD\|235677	PRK06029, PRK06029, UbiX family flavin prenyltransferase.	1.80215e-125
NZ_CP006027.1\|WP_000615820.1\|2992635_2993631_+\|flagella-biosynthesis-regulator-Flk	gnl\|CDD\|182670	PRK10715, flk, flagella biosynthesis regulator Flk.	1.69496e-154
NZ_CP006027.1\|WP_001289160.1\|2990321_2991335_-\|aspartate-semialdehyde-dehydrogenase	gnl\|CDD\|181205	PRK08040, PRK08040, putative semialdehyde dehydrogenase; Provisional.	0
NZ_CP006027.1\|WP_001293604.1\|2978331_2979105_-\|histidine-ABC-transporter-ATP-binding-protein-HisP	gnl\|CDD\|182592	PRK10619, PRK10619, histidine ABC transporter ATP-binding protein HisP.	0
NZ_CP006027.1\|WP_000569958.1\|2979112_2979829_-\|ABC-transporter-permease	gnl\|CDD\|185029	PRK15069, PRK15069, histidine ABC transporter permease HisM.	1.46536e-161
NZ_CP006027.1\|WP_000157003.1\|2985707_2986370_-\|cell-division-protein-DedD	gnl\|CDD\|236940	PRK11633, PRK11633, cell division protein DedD; Provisional.	1.56555e-127
NZ_CP006027.1\|WP_000156141.1\|2977244_2978135_-\|recombination-promoting-nuclease-RpnB	gnl\|CDD\|182117	PRK09857, PRK09857, recombination-promoting nuclease RpnA.	4.15016e-145
NZ_CP006027.1\|WP_000584555.1\|2986359_2987628_-\|bifunctional-tetrahydrofolate-synthase/dihydrofolate-synthase	gnl\|CDD\|182774	PRK10846, PRK10846, bifunctional folylpolyglutamate synthase/ dihydrofolate synthase; Provisional.	0

>NZ_CP006027.1|WP_000262113.1|2984869_2985358_-|colicin-V-production-protein
MVWIDYAIIAVIAFSSLVSLIRGFVREALSLVTWGCAFFVASHYYTYLSVWFTGFEDELVRNGIAIAVLFIATLIVGAIVNFVIGQLVEKTGLSGTDRVLGVCFGALRGVLIVAAILFFLDSFTGVSKSEDWSKSQLIPQFSFIIRWFFDYLQSSSSFLPRA
>NZ_CP006027.1|WP_000334220.1|2983315_2984833_-|amidophosphoribosyltransferase
MCGIVGIAGVMPVNQSIYDALTVLQHRGQDAAGIITIDANNCFRLRKANGLVSDVFEARHMQRLQGNMGIGHVRYPTAGSSSASEAQPFYVNSPYGITLAHNGNLTNAHELRKKLFEEKRRHINTTSDSEILLNIFASELDNFRHYPLEADNIFAAIAATNRLIRGAYACVAMIIGHGMVAFRDPNGIRPLVLGKRDIDENRTEYMVASESVALDTLGFDFLRDVAPGEAIYITEEGQLFTRQCADNPVSNPCLFEYVYFARPDSFIDKISVYSARVNMGTKLGEKIAREWEDLDIDVVIPIPETSCDIALEIARILGKPYRQGFVKNRYVGRTFIMPGQQLRRKSVRRKLNANRAEFRDKNVLLVDDSIVRGTTSEQIIEMAREAGAKKVYLASAAPEIRFPNVYGIDMPSATELIAHGREVDEIRQIIGADGLIFQDLNDLIDAVRAENPDIQQFECSVFNGVYVTKDVDQGYLDFLDTLRNDDAKAVQRQNEVENLEMHNEG
>NZ_CP006027.1|WP_000825700.1|2982651_2983221_-|flavin-prenyltransferase-UbiX
MKRLIVGISGASGAIYGVRLLQVLRDVTDIETHLVMSQAARQTLSLETDFSLREVQALADVTHDARDIAASISSGSFQTLGMVILPCSIKTLSGIVHSYTDGLLTRAADVVLKERRPLVLCVRETPLHLGHLRLMTQAAEIGAVIMPPVPAFYHRPQSLDDVINQTVNRVLDQFAITLPEDLFARWQGA
>NZ_CP006027.1|WP_000748251.1|2981604_2982387_-|lysine/arginine/ornithine-ABC-transporter-substrate-binding-protein-ArgT
MKKSILALSLLVGLSAAASSYAALPETVRIGTDTTYAPFSSKDAKGDFVGFDIDLGNEMCKRMQVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKRQQEIAFSDKLYAADSRLIAAKGSPIQPTLDSLKGKHVGVLQGSTQEAFANETWRSKGVDVVAYANQDLVYSDLAAGRLDAALQDEVAASEGFLKQPAGKDFAFAGSSVKDKKYFGDGTGVGLRKDDAELTAAFNKALGELRQDGTYDKMAKKYFDFNVYGD
>NZ_CP006027.1|WP_000737621.1|2980601_2981384_-|histidine-ABC-transporter-substrate-binding-protein-HisJ
MKKLVLSLSLVLAFSSATAAFAAIPQNIRIGTDPTYAPFESKNSQGELVGFDIDLAKELCKRINTQCTFVENPLDALIPSLKAKKIDAIMSSLSITEKRQQEIAFTDKLYAADSRLVVAKNSDIQPTVESLKGKRVGVLQGTTQETFGNEHWAPKGIEIVSYQGQDNIYSDLTAGRIDAAFQDEVAASEGFLKQPVGKDYKFGGPSVKDEKLFGVGTGMGLRKEDNELREALNKAFAEMRADGTYEKLAKKYFDFDVYGG
>NZ_CP006027.1|WP_000965518.1|2979825_2980512_-|histidine-ABC-transporter-permease-HisQ
MLYGFSGVILQGALVTLELAISSVVLAVIIGLIGAGGKLSQNRLSGLIFEGYTTLIRGVPDLVLMLLIFYGLQIALNTVTEAMGVGQIDIDPMVAGIITLGFIYGAYFTETFRGAFMAVPKGHIEAATAFGFTRGQVFRRIMFPAMMRYALPGIGNNWQVILKSTALVSLLGLEDVVKATQLAGKSTWEPFYFAIVCGVIYLVFTTVSNGVLLFLERRYSVGVKRADL
>NZ_CP006027.1|WP_000569958.1|2979112_2979829_-|ABC-transporter-permease
MIEILHEYWKPLLWTDGYRFTGVAITLWLLILSVVIGGVLALFLAIGRVSSNKYIQFPIWLFTYIFRGTPLYVQLLVFYSGMYTLEIVKGTEFLNAFFRSGLNCTVLALTLNTCAYTTEIFAGAIRSVPHGEIEAARAYGFSTFKMYRCIILPSALRIALPAYSNEVILMLHSTALAFTATVPDLLKIARDINAATYQPFTAFGIAAVLYLIISYVLISLFRRAEKRWLQHVKPSSTH
>NZ_CP006027.1|WP_001293604.1|2978331_2979105_-|histidine-ABC-transporter-ATP-binding-protein-HisP
MSENKLNVIDLHKRYGEHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQLKVADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKHEARERAVKYLAKVGIDERAQGKYPVHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSTHVIFLHQGKIEEEGAPEQLFGNPQSPRLQQFLKGSLK
>NZ_CP006027.1|WP_000156141.1|2977244_2978135_-|recombination-promoting-nuclease-RpnB
MTISTTSTPHDAVFKSFLRHPDTARDFIDIHLPAPLRKLCDLTTLKLEPNSFIDEDLRQYYSDLLWSVKTQEGVGYIYVVIEHQSKPEELMAFRMMRYSIAAMQNHLDAGYKELPLVIPMLFYHGCRSPYPYSLCWLDEFAEPAIARKIYSSAFPLVDITVVPDDEIMQHRKMALLELIQKHIRQRDLLGLVDQIVSLLVTGNTNDRQLKALFNYVLQTGDAQRFRAFIGEIAERAPQEKEKLMTIADRLREEGAMQGKHEEALRIAQEMLEKGFDHEVILTLTRLSPDDLIAQSH
>NZ_CP006027.1|WP_001028352.1|2976303_2977197_+|TIGR01777-family-protein
MNIVITGGTGLIGRHLIPRLQELGHQITVMTRNPQKASSVLGPRVTLWQGLADQSNLNGVDAVINLAGEPIADKRWTHEQKERLCQSRWNITQKLVDLINASDTPPSVLISGSATGYYGDLGEVVVTEEEPPHNEFTHKLCARWEEIACRAQSDKTRVCLLRTGVVLAPDGGILGKMLPPFRLGLGGPIGSGRQYLAWIHIDDMVNGILWLLDNELRGPFNMVSPYPVRNEQFAHALGHALHRPAILRVPATAIRLLMGESSVLVLGGQRALPKRLEEAGFAFRWYDLEEALADVVR
>NZ_CP006027.1|WP_000157003.1|2985707_2986370_-|cell-division-protein-DedD
MASKFQNRLVGTIVLVALGVIVLPGLLDGQKKHYQDEFAAIPLVPKAGDRDEPDMMPAATQALPTQPPEGAAEEVRAGDAAAPSLDPATIAANNTEFEPEPAPVVPPKPKPVEPPKPKVEAPPAPKPEPKPVVEEKAAPTGKAYVVQLGALKNADKVNEIVGKLRGAGYRVYTSPSTPVQGKITRILVGPDASKDKLKGSLGELKQLSGLSGVVMGYTPN
>NZ_CP006027.1|WP_000584555.1|2986359_2987628_-|bifunctional-tetrahydrofolate-synthase/dihydrofolate-synthase
MIIKRTPQAASPLASWLSYLENLHSKTIDLGLERVSQVAARLGVLKPAPFVFTVAGTNGKGTTCRTLESILMAAGYKVGVYSSPHLVRYTERVRVQGKELPESAHTASFAEIESARGDISLTYFEYGTLSALWLFKQAQLDVVILEVGLGGRLDATNIVDADVAVVTSIALDHTDWLGPDRESIGREKAGIFRSEKPAIVGEPEMPSTIADVAQEKGALLQRRGVEWNYSVTDHDWAFSDAHGTLENLPLPLVPQPNAATALAALRASGLEVSENAIRDGIASAILPGRFQIVSESPRVIFDVAHNPHAAEYLTGCMKALPKNGRVLAVIGMLHDKDIAGTLAWLKSVVDDWYCAPLEGPRGATAEQLLEHLGNGKSFDSVAQAWDAAMADAKAEDTVLVCGSFHTVAHVMEVIDARRSGGK
>NZ_CP006027.1|WP_000118404.1|2987697_2988612_-|acetyl-CoA-carboxylase,-carboxyltransferase-subunit-beta
MSWIERIKSNITPTRKASIPEGVWTKCDSCGQVLYRAELERNLEVCPKCDHHMRMTARNRLHSLLDEGSLVELGSELEPKDVLKFRDSKKYKDRLASAQKETGEKDALVVMKGTLYGMPVVAAAFEFAFMGGSMGSVVGARFVRAVEQALEDNCPLICFSASGGARMQEALMSLMQMAKTSAALAKMQERGLPYISVLTDPTMGGVSASFAMLGDLNIAEPKALIGFAGPRVIEQTVREKLPPGFQRSEFLIEKGAIDMIVRRPEMRLKLASILAKLMNLPAPNPEAPREGVVVPPVPDQEPEA
>NZ_CP006027.1|WP_000364335.1|2988767_2989427_-|DedA-family-protein
MDLIYFLIDFILHIDVHLAELVAEYGVWVYAILFLILFCETGLVVTPFLPGDSLLFVAGALASLETNDLNVHMMVVLMLIAAIVGDAVNYTIGRLFGEKLFSNPNSKIFRRSYLDKTHQFYEKHGGKTIILARFVPIVRTFAPFVAGMGHMSYRHFAAYNVIGALLWVLLFTYAGYFFGTIPMVQDNLKLLIVGIIVVSILPGVIEIIRHKRAAARAAK
>NZ_CP006027.1|WP_001283590.1|2989509_2990322_-|tRNA-pseudouridine(38-40)-synthase-TruA
MSDQQQPPVYKIALGIEYDGSKYYGWQRQNEVRSVQEKLEKALSQVANEPITVFCAGRTDAGVHGTGQVVHFETTAQRKDAAWTLGVNANLPGDIAVRWVKAVPDDFHARFSATARRYRYIIYNHRLRPAVLSKGVTHFYEPLDAERMHRAAQCLLGENDFTSFRAVQCQSRTPWRNVMHINVTRHGPYVVVDIKANAFVHHMVRNIVGSLMEVGAHNQPESWIAELLAAKDRTLAAATAKAEGLYLVAVDYPDRYDLPKPPMGPLFLAD
>NZ_CP006027.1|WP_001289160.1|2990321_2991335_-|aspartate-semialdehyde-dehydrogenase
MSEGWNIAVLGATGAVGEALLETLAERQFPVGEIYALARNESAGEQLRFGGKTITVQDAAEFDWTQAQLAFFVAGKEATAAWVEEATNSGCLVIDSSGLFALEPDVPLVVPEVNPFVLTDYRNRNVIAVPDSLTCQLLAALKPLIDQGGLSRISVTSLISASAQGKKAVEALAGQSAKLLNGIPIDEEDFFGRQLAFNMLPLLPDSEGSVREERRIVDEVRKILQDEGLMISASVVQAPVFYGHAQMVNFEALRPLAAEEARDAFVQGEDIVLSEENEFPTQVGDASGTPHLSVGCVRNDYGMPEQVQFWSVADNVRFGGALMAVKIAEKLVQEYLY
>NZ_CP006027.1|WP_000699113.1|2991400_2992537_-|4-phosphoerythronate-dehydrogenase-PdxB
MKILVDENMPYARDLFSRLGEVIAVPGRPIPVAQLADADALMVRSVTKVNESLLAGKPIKFVGTATAGTDHVDEAWLKQAGIGFSAAPGCNAIAVVEYVFSSLLMLAERDGFSLHERTVGIVGVGNVGRRLQARLEALGIKTLLCDPPRADRGDEGDFRSLDELVQRADILTFHTPLFKDGPYKTLHLADEKLIRSLKPGAILINACRGAVVDNTALLTCLNEGQKLSVVLDVWEGEPELNVELLTKVDIGTPHIAGYTLEGKARGTTQVFEAYSKFIGHEQHVALDTLLPAPEFGRITLHGPLDQPTLKRLVHLVYDVRRDDAPLRKVAGIPGEFDKLRKNYLERREWSSLYVICDDASAASLLCKLGFNAVHHPAR
>NZ_CP006027.1|WP_000615820.1|2992635_2993631_+|flagella-biosynthesis-regulator-Flk
MIQPISGPPPGQPPGQGDNLPSGAGNQPLSSQQRTSLESLMTKVTSLTQQQRAELWAGIRHDIGLSGDSPLLSRHFPAAEHNLAQRLLAAQKSHSARQLLAQLGEYLRLGNNRQAVTDYIRHNFGQTPLNQLSPEQLKTILTLLQEGKMVIPQPQQREATDRPLLPAEHNALKQLVTKLAAATGEPSKQIWQSMLELSGVKDGELIPAKLFNHLVTWLQARQTLSQQNTPTLESLQMTLKQPLDASELAALSAYIQQKYGLSAQSSLSSAQAEDILNQLYQRRVKGIDPRDMQPLLNPFPPMMDTLQNMATRPALWILLVAIILMLVWLVR
>NZ_CP006027.1|WP_000127796.1|2993627_2994806_-|MFS-transporter
MTAVSQTETRSSANFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHELGYGNTMVGISVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGGALLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWRLGIVGPKHSGKVMSWNGMAIYGALAVGAPLGLLIHSHYGFAALALTTMALPLLAWACNGTVRKVPALAGERPSLWSVVGLIWKPGSGLALQGVGFAVIGTFVSLYFASKGWAMAGFTLTAFGGAFVVMRVMFGWMPDRFGGVKVAIVSLLVETVGLLLLWQAPGAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIALGVSGPLAGMLATTFGYSSVFLAGAISAVLGIIVTILSFRRG
>NZ_CP006027.1|WP_000817178.1|2995080_2996301_-|beta-ketoacyl-ACP-synthase-I
MKRAVITGLGIVSSIGNNQQEVLASLREGRSGITFSQELKDSGMRSHVWGNVKLDTTGLIDRKVVRFMSDASIYAFLSMEQAIADAGLSPEAYQNNPRVGLIAGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVSACLATPFKIHGVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELCWEMACEFDAMGALSTKYNDTPEKASRTYDAHRDGFVIAGGGGMVVVEELEHALARGAHIYAEIVGYGATSDGADMVAPSGEGAVRCMKMAMHGVDTPIDYLNSHGTSTPVGDVKELAAIREVFGDKSPAISATKAMTGHSLGAAGVQEAIYSLLMLEHGFIAPSINIEELDEQAAGLNIVTETTDRELTTVMSNSFGFGGTNATLVMRKLKD

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Crispr_ID: NZ_CP006027_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP006027_3

3270616-3270739

Orphan

Consensus_repeat	Method
TGTCGGATGCGGCGTGAACGCCATATCCGACCT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP006027_3

>merge|NZ_CP006027|3|3270616-3270739|CRISPRCasFinder
TGTCGGATGCGGCGTGAACGCCATATCCGACCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCT

>NZ_CP006027|3|3|3270616-3270739|CRISPRCasFinder
TGTCGGATGCGGCGTGAACGCCATATCCGACCT	GGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGC
TGTCGGATGCGGCGTGAACGCCTTATCCGACCT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP006027.1\|WP_000331707.1\|3268210_3268597_-\|Fe-S-cluster-assembly-scaffold-IscU	unknown	unknown	gnl\|CDD\|183087
NZ_CP006027.1\|WP_000553451.1\|3271658_3272462_+\|inositol-1-monophosphatase	unknown	unknown	gnl\|CDD\|236753
NZ_CP006027.1\|WP_000423257.1\|3276222_3277113_-\|DNA-binding-transcriptional-regulator-HcaR	unknown	unknown	gnl\|CDD\|182137
NZ_CP006027.1\|WP_001241357.1\|3269950_3270439_-\|Fe-S-cluster-assembly-transcriptional-regulator-IscR	unknown	unknown	gnl\|CDD\|236777
NZ_CP006027.1\|WP_001124889.1\|3281388_3282372_-\|sugar-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|380540
NZ_CP006027.1\|WP_001295373.1\|3268624_3269839_-\|cysteine-desulfurase	unknown	unknown	gnl\|CDD\|184450
NZ_CP006027.1\|WP_000940019.1\|3270799_3271540_-\|tRNA-(cytosine(32)/uridine(32)-2'-O)-methyltransferase-TrmJ	unknown	unknown	gnl\|CDD\|185069
NZ_CP006027.1\|WP_001400503.1\|3262396_3263173_-\|enhanced-serine-sensitivity-protein-SseB	unknown	unknown	gnl\|CDD\|183229
NZ_CP006027.1\|WP_000982994.1\|3273651_3274932_+\|stationary-phase-inducible-protein-CsiE	unknown	unknown	gnl\|CDD\|236932
NZ_CP006027.1\|WP_001299515.1\|3272606_3273461_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223999
NZ_CP006027.1\|WP_001124469.1\|3265055_3265391_-\|ISC-system-2Fe-2S-type-ferredoxin	unknown	unknown	gnl\|CDD\|131062
NZ_CP006027.1\|WP_001080102.1\|3279124_3279445_+\|bifunctional-3-phenylpropionate/cinnamic-acid-dioxygenase-ferredoxin-subunit	unknown	unknown	gnl\|CDD\|170182
NZ_CP006027.1\|WP_025380539.1\|3265392_3267243_-\|Fe-S-protein-assembly-chaperone-HscA	unknown	unknown	gnl\|CDD\|235360
NZ_CP006027.1\|WP_000133553.1\|3263315_3264599_-\|aminopeptidase-PepB	unknown	unknown	gnl\|CDD\|235330
NZ_CP006027.1\|WP_000244203.1\|3274923_3276063_-\|3-phenylpropionate-MFS-transporter	unknown	unknown	gnl\|CDD\|236856
NZ_CP006027.1\|WP_000523616.1\|3264843_3265044_-\|Fe-S-cluster-assembly-protein-IscX	unknown	unknown	gnl\|CDD\|170660
NZ_CP006027.1\|WP_000384413.1\|3267259_3267775_-\|co-chaperone-HscB	unknown	unknown	gnl\|CDD\|179914
NZ_CP006027.1\|WP_000028953.1\|3267870_3268194_-\|iron-sulfur-cluster-assembly-protein-IscA	unknown	unknown	gnl\|CDD\|181914
NZ_CP006027.1\|WP_001276076.1\|3278606_3279125_+\|3-phenylpropionate/cinnamic-acid-dioxygenase-subunit-beta	unknown	unknown	gnl\|CDD\|236647
NZ_CP006027.1\|WP_000211172.1\|3277248_3278610_+\|aromatic-ring-hydroxylating-dioxygenase-subunit-alpha	unknown	unknown	gnl\|CDD\|176890

Protein	Function_ID	Function_description	E-value
NZ_CP006027.1\|WP_000331707.1\|3268210_3268597_-\|Fe-S-cluster-assembly-scaffold-IscU	gnl\|CDD\|183087	PRK11325, PRK11325, scaffold protein; Provisional.	3.13648e-99
NZ_CP006027.1\|WP_000553451.1\|3271658_3272462_+\|inositol-1-monophosphatase	gnl\|CDD\|236753	PRK10757, PRK10757, inositol-1-monophosphatase.	0
NZ_CP006027.1\|WP_000423257.1\|3276222_3277113_-\|DNA-binding-transcriptional-regulator-HcaR	gnl\|CDD\|182137	PRK09906, PRK09906, DNA-binding transcriptional regulator HcaR; Provisional.	1.15773e-177
NZ_CP006027.1\|WP_001241357.1\|3269950_3270439_-\|Fe-S-cluster-assembly-transcriptional-regulator-IscR	gnl\|CDD\|236777	PRK10857, PRK10857, Fe-S cluster assembly transcriptional regulator IscR.	1.63613e-111
NZ_CP006027.1\|WP_001124889.1\|3281388_3282372_-\|sugar-ABC-transporter-substrate-binding-protein	gnl\|CDD\|380540	cd06317, PBP1_ABC_sugar_binding-like, periplasmic sugar-binding domain of uncharacterized ABC-type transport systems. Periplasmic sugar-binding domain of uncharacterized ABC-type transport systems that share homology with a family of pentose/hexose sugar-binding proteins of the type 1 periplasmic binding protein superfamily, which consists of two domains connected by a three-stranded hinge. The substrate specificity of this group is not known, but it is predicted to be involved in the transport of sugar-containing molecules and chemotaxis.	3.59427e-111
NZ_CP006027.1\|WP_001295373.1\|3268624_3269839_-\|cysteine-desulfurase	gnl\|CDD\|184450	PRK14012, PRK14012, IscS subfamily cysteine desulfurase.	0
NZ_CP006027.1\|WP_000940019.1\|3270799_3271540_-\|tRNA-(cytosine(32)/uridine(32)-2'-O)-methyltransferase-TrmJ	gnl\|CDD\|185069	PRK15114, PRK15114, tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ; Provisional.	0
NZ_CP006027.1\|WP_001400503.1\|3262396_3263173_-\|enhanced-serine-sensitivity-protein-SseB	gnl\|CDD\|183229	PRK11611, PRK11611, enhanced serine sensitivity protein SseB; Provisional.	1.13482e-176
NZ_CP006027.1\|WP_000982994.1\|3273651_3274932_+\|stationary-phase-inducible-protein-CsiE	gnl\|CDD\|236932	PRK11564, PRK11564, stationary phase inducible protein CsiE; Provisional.	0
NZ_CP006027.1\|WP_001299515.1\|3272606_3273461_+\|alpha/beta-hydrolase	gnl\|CDD\|223999	COG1073, COG1073, Hydrolases of the alpha/beta superfamily [General function prediction only].	5.14742e-37
NZ_CP006027.1\|WP_001124469.1\|3265055_3265391_-\|ISC-system-2Fe-2S-type-ferredoxin	gnl\|CDD\|131062	TIGR02007, 2Fe-2S_ferredoxin, ferredoxin, 2Fe-2S type, ISC system. This family consists of proteobacterial ferredoxins associated with and essential to the ISC system of 2Fe-2S cluster assembly. This family is closely related to (but excludes) eukaryotic (mitochondrial) adrenodoxins, which are ferredoxins involved in electron transfer to P450 cytochromes. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	2.60952e-69
NZ_CP006027.1\|WP_001080102.1\|3279124_3279445_+\|bifunctional-3-phenylpropionate/cinnamic-acid-dioxygenase-ferredoxin-subunit	gnl\|CDD\|170182	PRK09965, PRK09965, 3-phenylpropionate dioxygenase ferredoxin subunit; Provisional.	6.92601e-61
NZ_CP006027.1\|WP_025380539.1\|3265392_3267243_-\|Fe-S-protein-assembly-chaperone-HscA	gnl\|CDD\|235360	PRK05183, hscA, chaperone protein HscA; Provisional.	0
NZ_CP006027.1\|WP_000133553.1\|3263315_3264599_-\|aminopeptidase-PepB	gnl\|CDD\|235330	PRK05015, PRK05015, aminopeptidase B; Provisional.	0
NZ_CP006027.1\|WP_000244203.1\|3274923_3276063_-\|3-phenylpropionate-MFS-transporter	gnl\|CDD\|236856	PRK11128, PRK11128, 3-phenylpropionate MFS transporter.	0
NZ_CP006027.1\|WP_000523616.1\|3264843_3265044_-\|Fe-S-cluster-assembly-protein-IscX	gnl\|CDD\|170660	PRK10721, PRK10721, hypothetical protein; Provisional.	9.45894e-40
NZ_CP006027.1\|WP_000384413.1\|3267259_3267775_-\|co-chaperone-HscB	gnl\|CDD\|179914	PRK05014, hscB, co-chaperone HscB; Provisional.	1.92468e-95
NZ_CP006027.1\|WP_000028953.1\|3267870_3268194_-\|iron-sulfur-cluster-assembly-protein-IscA	gnl\|CDD\|181914	PRK09502, iscA, iron-sulfur cluster assembly protein IscA.	1.60892e-70
NZ_CP006027.1\|WP_001276076.1\|3278606_3279125_+\|3-phenylpropionate/cinnamic-acid-dioxygenase-subunit-beta	gnl\|CDD\|236647	PRK10069, PRK10069, 3-phenylpropionate/cinnamic acid dioxygenase subunit beta.	1.40333e-78
NZ_CP006027.1\|WP_000211172.1\|3277248_3278610_+\|aromatic-ring-hydroxylating-dioxygenase-subunit-alpha	gnl\|CDD\|176890	cd08881, RHO_alpha_C_NDO-like, C-terminal catalytic domain of the oxygenase alpha subunit of naphthalene 1,2-dioxygenase (NDO) and related aromatic ring hydroxylating dioxygenases. C-terminal catalytic domain of the oxygenase alpha subunit of naphthalene 1,2-dioxygenase (NDO) and related Rieske-type non-heme iron aromatic ring-hydroxylating oxygenases (RHOs, also known as aromatic ring hydroxylating dioxygenases). This domain binds non-heme Fe(II). RHOs utilize non-heme Fe(II) to catalyze the addition of hydroxyl groups to the aromatic ring, an initial step in the oxidative degradation of aromatic compounds. RHOs are composed of either two or three protein components, and are comprised of an electron transport chain (ETC) and an oxygenase. The ETC transfers reducing equivalents form the electron donor to the oxygenase component, which in turn transfers electrons to the oxygen molecules. The oxygenase components are oligomers, either (alpha)n or (alpha)n(beta)n. The alpha subunits are the catalytic components and have an N-terminal domain, which binds a Rieske-like 2Fe-2S cluster, and a C-terminal domain which binds the non-heme Fe(II). The Fe(II) is co-ordinated by conserved His and Asp residues. Proteins belonging to this subgroup include the terminal oxygenase alpha subunits of biphenyl dioxygenase, cumene dioxygenase from Pseudomonas fluorescens IP01, ethylbenzene dioxygenase, naphthalene 1,2-dioxygenase, nitrobenzene dioxygenase from Comamonas sp. strain JS765, toluene 2,3-dioxygenase from Pseudomonas putida F1, dioxin dioxygenase of Sphingomonas sp. Strain RW1, and the polycyclic aromatic hydrocarbons (PAHs)degrading ring-hydroxylating dioxygenase from Sphingomonas CHY-1. This subfamily belongs to the SRPBCC (START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC) domain superfamily of proteins that bind hydrophobic ligands. SRPBCC domains have a deep hydrophobic ligand-binding pocket.	4.93197e-87

>NZ_CP006027.1|WP_001241357.1|3269950_3270439_-|Fe-S-cluster-assembly-transcriptional-regulator-IscR
MRLTSKGRYAVTAMLDVALNSEAGPVPLADISERQGISLSYLEQLFSRLRKNGLVSSVRGPGGGYLLGKDASSIAVGEVISAVDESVDATRCQGKGGCQGGDKCLTHALWRDLSDRLTGFLNNITLGELVNNQEVLDVSGRQHTHDAPRTRTQDAIDVKLRA
>NZ_CP006027.1|WP_001295373.1|3268624_3269839_-|cysteine-desulfurase
MKLPIYLDYSATTPVDPRVAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLVGADPREIVFTSGATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQRNGIIDLKELEAAMRDDTILVSIMHVNNEIGVVQDIAAIGEMCRARGIIYHVDATQSVGKLPIDLSQLKVDLMSFSGHKIYGPKGIGALYVRRKPRVRIEAQMHGGGHERGMRSGTLPVHQIVGMGEAYRIAKEEMATEMERLRGLRNRLWNGIKDIEEVYLNGDLEHGAPNILNVSFNYVEGESLIMALKDLAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYTIELVRKSIGRLRDLSPLWEMYKQGVDLNSIEWAHH
>NZ_CP006027.1|WP_000331707.1|3268210_3268597_-|Fe-S-cluster-assembly-scaffold-IscU
MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAIADYKSKREAK
>NZ_CP006027.1|WP_000028953.1|3267870_3268194_-|iron-sulfur-cluster-assembly-protein-IscA
MSITLSDSAAARVNTFLANRGKGFGLRLGVRTSGCSGMAYVLEFVDEPTPEDIVFEDKGVKVVVDGKSLQFLDGTQLDFVKEGLNEGFKFTNPNVKDECGCGESFHV
>NZ_CP006027.1|WP_000384413.1|3267259_3267775_-|co-chaperone-HscB
MDYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSLHGFDLASEQHTVRDTAFLMEQLELREELDEIEQAKDEARLESFIKRVKKMFDTRHQLMVEQLDNETWDAAADTVRKLRFLDKLRSSAEQLEEKLLDF
>NZ_CP006027.1|WP_025380539.1|3265392_3267243_-|Fe-S-protein-assembly-chaperone-HscA
MALLQISEPGLSAAPHQRRLAAGIDLGTTNSLVATVRSGQAETLADHEGRHLLPSVVHYQQQGHSVGYDARTNAALDTANTISSVKRLMGRSLADIQQRYPHLPYQFQASENGLPMIETAAGLLNPVRVSADILKALAARATEALAGELDGVVITVPAYFDDAQRQGTKDAARLAGLHVLRLLNEPTAAAIAYGLDSGQEGVIAVYDLGGGTFDISILRLSRGVFEVLATGGDSALGGDDFDHLLADYIREQAGIPDRSDNRVQRELLDAAIAAKIALSDADSVTVNVAGWQGEISREQFNELIAPLVKRTLLACRRALKDAGVEADEVLEVVMVGGSTRVPLVRERVGEFFGRPPLTSIDPDKVVAIGAAIQADILVGNKPDSEMLLLDVIPLSLGLETMGGLVEKVIPRNTTIPVARAQDFTTFKDGQTAMSIHVMQGERELVQDCRSLARFALRGIPALPAGGAHIRVTFQVDADGLLSVTAMEKSTGVEASIQVKPSYGLTDSEIASMIKDSMSYAEQDVKARMLAEQKVEAARVLESLHGALVADAALLSAAERQVIDDAAAHLSEVAQGDDIDAIEQAIKNVDKQTQDFAARRMDQSVRRALKGHSVDEV
>NZ_CP006027.1|WP_001124469.1|3265055_3265391_-|ISC-system-2Fe-2S-type-ferredoxin
MPKIVILPHQDLCPDGAVLEANSGETILDAALRNGIEIEHACEKSCACTTCHCIVREGFDSLPESSEQEDDMLDKAWGLEPESRLSCQARVTDEDLVVEIPRYTINHAREH
>NZ_CP006027.1|WP_000523616.1|3264843_3265044_-|Fe-S-cluster-assembly-protein-IscX
MGLKWTDSREIGEALYDAYPDLDPKTVRFTDMHQWICDLEDFDDDPQASNEKILEAILLVWLDEAE
>NZ_CP006027.1|WP_000133553.1|3263315_3264599_-|aminopeptidase-PepB
MTEAMKITLSTQPADARWGEKATYSINNDGIILHLNGADDLGLIQRAARKIDGLGIKHVQLSGEGWDVDRCWAFWQGYKAPKGTRKVEWPDLDDAQRQELDNRLMIIDWVRDTINAPAEELGPSQLAQRAVDLISNVAGDRVTYRITKGEDLREQGYMGLHTVGRGSERSPVLLALDYNPTGDKEAPVYACLVGKGITFDSGGYSIKQTAFMDSMKSDMGGAATVTGALAFAITRGLNKRVKLFLCCADNLISGNAFKLGDIITYRNGKKVEVMNTDAEGRLVLADGLIDASAQKPELIIDAATLTGAAKTALGNDYHALFSFDDALAGRLLASASQENEPFWRLPLAEFHRSQLPSNFAELNNTGSAAYPAGASTAAGFLSHFVENYQQGWLHIDCSATYRKAPVEQWSAGATGLGVRTIANLLTA
>NZ_CP006027.1|WP_001400503.1|3262396_3263173_-|enhanced-serine-sensitivity-protein-SseB
MSETKNELEDLLEKAATEPAHRPAFFRTLLESTVWVPGTAAQGEAVVEDSALDLQHWEKEDGTSVIPFFTSLEALQQAVEDEQAFVVMPVRTLFEMTLGETLFLNAKLPTGKEFMPREISLLIGEEGNPLSSQEILEGGESLILSEVAEPPAQMIDSLTTLFKTIKPVKRAFICSIKENEEAQPNLLIGIEADGDVEEIIQAAGSVATDTLPADEPIDICQVKKGEKGISHFITEHIAPFYERRWGGFLRDFKQNRII
>NZ_CP006027.1|WP_000940019.1|3270799_3271540_-|tRNA-(cytosine(32)/uridine(32)-2'-O)-methyltransferase-TrmJ
MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNKGNKAE
>NZ_CP006027.1|WP_000553451.1|3271658_3272462_+|inositol-1-monophosphatase
MHPMLNIAVRAARKAGNLIAKNYETPDAVEASQKGSNDFVTNVDKAAEAVIIDTIRKSYPQHTIITEESGELEGTDQDVQWVIDPLDGTTNFIKRLPHFAVSIAVRIKGRTEVAVVYDPMRNELFTATRGQGAQLNGYRLRGSTARDLDGTILATGFPFKAKQYATTYINIVGKLFNECADFRRTGSAALDLAYVAAGRVDGFFEIGLRPWDFAAGELLVREAGGIVSDFTGGHNYMLTGNIVAGNPRVVKAMLANMRDELSDALKR
>NZ_CP006027.1|WP_001299515.1|3272606_3273461_+|alpha/beta-hydrolase
MALPVNKRVPKILFILFVVAFCVYLVPRVAINFFYYPDDKIYGPDPWSAESVEFTAKDGTRLQGWFIPSSTGPADNAIATIIHAHGNAGNMSAHWPLVSWLPERNFNVFMFDYRGFGKSKGTPSQAGLLDDTQSAINVVRHRSDVNPQRLVLFGQSIGGANILAVIGQGDREGIRAVILDSTFASYATIANQMIPGSGYLLDESYSGENYIASVSPIPLLLIHGKADHVIPWQHSEKLYSLAKEPKRLILIPDGEHIDAFSDRHGDVYREQMVDFILSALNPQN
>NZ_CP006027.1|WP_000982994.1|3273651_3274932_+|stationary-phase-inducible-protein-CsiE
MMPTLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLESA
>NZ_CP006027.1|WP_000244203.1|3274923_3276063_-|3-phenylpropionate-MFS-transporter
MVLQSTRWLALGYFTYFFSYGIFLPFWSVWLKGIGLTPETIGLLLGAGLVARFLGSLLIAPRVSDPSRLISALRVLALLTLLFAVAFWAGAHVAWLMLVMIGFNLFFSPLVPLTDALANTWQKQFPLDYGKVRLWGSVAFVIGSALTGKLVTMFDYRVILVLLTLGVASMLLGFLIRPTIQPQGASRQQESTGWSAWLALVRQNWRFLACVCLLQGAHAAYYGFSAIYWQAAGYSASAVGYLWSLGVVAEVIIFALSNKLFRRCSARDMLLISAICGVVRWGIMGATTALPWLIVVQILHCGTFTVCHLAAMRYIAARQGSEVIRLQAVYSAVAMGGSIAIMTVFAGFLYQYLGHGVFWVMALVALPAMFLRPKVVPSC
>NZ_CP006027.1|WP_000423257.1|3276222_3277113_-|DNA-binding-transcriptional-regulator-HcaR
MELRHLRYFVAVAQALNFTRAAEKLHTSQPSLSSQIRDLENCVGVPLLVRDKRKVALTAAGECFLQDALAILEQAENAKLRARKIVQEDRQLTIGFVPSAEVNLLPKVLPMFRLRQPDTLIELVSLITTQQEEKIRRGELDVGLMRHPVYSPEIDYLELFDEPLVVVLPVDHPLAHEKEITAAQLDGVNFVSTDPAYSGSLAPIVKAWFAQENSQPNIVQVATNILVTMNLVGMGLGVTLIPGYMNNFNTGQVVFRPIAGNVPSIALLMAWKKGEMKPALRDFIAIVQERLASVTA
>NZ_CP006027.1|WP_000211172.1|3277248_3278610_+|aromatic-ring-hydroxylating-dioxygenase-subunit-alpha
MTTPSDLNIYQLIDTQNGRVTPRIYTDPDIYQLELERIFGRCWLFLAHESQIPKPGDFFNTYMGEDAVVVVRQKDGSIKAFLNQCRHRAMRVSYADCGNTRAFTCPYHGWSYGINGELIDVPLEPRAYPQGLCKSHWGLNEVPCVESYKGLIFGNWDTSAPGLRDYLGDIAWYLDGMLDRREGGTEIVGGVQKWVINCNWKFPAEQFASDQYHALFSHASAVQVLGAKDDGSDKRLGDGQTARPVWETAKDALQFGQDGHGSGFFFTEKPDANVWVDGAVSSYYRETYAEAEQRLGEVRALRLAGHNNIFPTLSWLNGTATLRVWHPRGPDQVEVWAFCITDKAASDEVKAAFENSATRAFGPAGFLEQDDSENWCEIQKLLKGHRARNSKLCLEMGLGQEKRRDDGIPGITNYIFSETAARGMYQRWADLLSSESWQEVLDKTAAYQQEVMK
>NZ_CP006027.1|WP_001276076.1|3278606_3279125_+|3-phenylpropionate/cinnamic-acid-dioxygenase-subunit-beta
MSAQVSLELHHRISQFLFHEASLLDDWKFRDWLAQLDEEIRYTMRTTVNAQTRDRRKGVQPPTTWIFNDTKDQLERRIARLETGMAWAEEPPSRTRHLISNCQVSETDIPNVFAVRVNYLLYRAQKERDETFYVGTRFDKVRRLEDDNWRLLERDIVLDQAVITSHNLSVLF
>NZ_CP006027.1|WP_001080102.1|3279124_3279445_+|bifunctional-3-phenylpropionate/cinnamic-acid-dioxygenase-ferredoxin-subunit
MNRIYACPVADVPEGEALRIDTSPVIALFNVGGEFYAINDRCSHGNASMSEGYLEDDATVECPLHAASFCLKTGKALCLPATDPLTTYPVHVEGGDIFIDLPEAQP
>NZ_CP006027.1|WP_001124889.1|3281388_3282372_-|sugar-ABC-transporter-substrate-binding-protein
MPKKMRTTRNLLLMATLLGSALFARAADKEMTIGAIYLDTQGYYAGVRQGVQDAAKDSSVQVQLIETNAQGDISKESTFVDTLVARNVDAIILSAVSENGSSRTVRRASEAGIPVICYNTCINQKGVDKYVSAYLVGDPLEFGKKLGNAAADYFIANKIDQPKIAVINCEAFEVCVQRRKGFEEVLKARVPGAQIVANQEGTVLDKAISVGEKLIISTPDLNAIMGESGGATLGAVKAVRNQNQAGKIAVFGSDMTTEIAQELENNQVLKAVVDISGKKMGNAVFAQTLKVINKQADGEKVIQVPIDLYTKTEDGKQWLATHVDGLP

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Crispr_ID: NZ_CP006027_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP006027_4

3498233-3498627

TypeI-E

I-E

Consensus_repeat	Method
CGGTTTATCCCCGCTGGCGCGGGGAACTC	CRISPRCasFinder
CGGTTTATCCCCGCTGGCGCGGGGAACTC	CRT
CGGTTTATCCCCGCTGGCGCGGGGAACTC	PILER-CR

6 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

The CRISPR arrays of NZ_CP006027_4

>merge|NZ_CP006027|4|3498233-3498627|CRISPRCasFinder,CRT,PILER-CR
GGGTGTTCTACCGCAGGGGCGGGGAATTCTAAGTGATATCCATCATCGCATCCAGTGCGCCCGGTTTATCCCCGCTGGCGCGGGGAACTCGAGACCTGCCATGAGGTGGATTTATCAGTCGGCGGTTTATCCCCGCTGGCGCGAGGAACTCTGCACGAAAAATGGCAGGCTTGCCAGCATCCTCGGTTTATCCCCGCTGGCGCGGGGAACTCGACCCACGCACACACTGCGCGCAGCCCTGATTCGGTTTATCCCCGCTGACGCGGGGAACTCGATTTTTTCCGCTTCTGACAAATGGTTTTTATCGGTTTATCCCCGCTGGCGCGGGGAACTCTTGATGAAGCGGCGCGTGTTATAGCTGATGGCCGGTTTATCCCCGCTGGCGCGGGGAACTC

>NZ_CP006027|4|4|3498233-3498627|CRISPRCasFinder
GGGTGTTCTACCGCAGGGGCGGGGAATTC	TAAGTGATATCCATCATCGCATCCAGTGCGCC
CGGTTTATCCCCGCTGGCGCGGGGAACTC	GAGACCTGCCATGAGGTGGATTTATCAGTCGG
CGGTTTATCCCCGCTGGCGCGAGGAACTC	TGCACGAAAAATGGCAGGCTTGCCAGCATCCT
CGGTTTATCCCCGCTGGCGCGGGGAACTC	GACCCACGCACACACTGCGCGCAGCCCTGATT
CGGTTTATCCCCGCTGACGCGGGGAACTC	GATTTTTTCCGCTTCTGACAAATGGTTTTTAT
CGGTTTATCCCCGCTGGCGCGGGGAACTC	TTGATGAAGCGGCGCGTGTTATAGCTGATGGC
CGGTTTATCCCCGCTGGCGCGGGGAACTC

>NZ_CP006027|4|1|3498233-3498627|CRT
GGGTGTTCTACCGCAGGGGCGGGGAATTC	TAAGTGATATCCATCATCGCATCCAGTGCGCC
CGGTTTATCCCCGCTGGCGCGGGGAACTC	GAGACCTGCCATGAGGTGGATTTATCAGTCGG
CGGTTTATCCCCGCTGGCGCGAGGAACTC	TGCACGAAAAATGGCAGGCTTGCCAGCATCCT
CGGTTTATCCCCGCTGGCGCGGGGAACTC	GACCCACGCACACACTGCGCGCAGCCCTGATT
CGGTTTATCCCCGCTGACGCGGGGAACTC	GATTTTTTCCGCTTCTGACAAATGGTTTTTAT
CGGTTTATCCCCGCTGGCGCGGGGAACTC	TTGATGAAGCGGCGCGTGTTATAGCTGATGGC
CGGTTTATCCCCGCTGGCGCGGGGAACTC

>NZ_CP006027|4|1|3498294-3498627|PILER-CR
CGGTTTATCCCCGCTGGCGCGGGGAACTC	GAGACCTGCCATGAGGTGGATTTATCAGTCGG
CGGTTTATCCCCGCTGGCGCGAGGAACTC	TGCACGAAAAATGGCAGGCTTGCCAGCATCCT
CGGTTTATCCCCGCTGGCGCGGGGAACTC	GACCCACGCACACACTGCGCGCAGCCCTGATT
CGGTTTATCCCCGCTGACGCGGGGAACTC	GATTTTTTCCGCTTCTGACAAATGGTTTTTAT
CGGTTTATCCCCGCTGGCGCGGGGAACTC	TTGATGAAGCGGCGCGTGTTATAGCTGATGGC
CGGTTTATCCCCGCTGGCGCGGGGAACTC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP006027.1\|WP_000281400.1\|3499951_3500551_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|273869
NZ_CP006027.1\|WP_001246103.1\|3493607_3493931_-\|DUF3561-family-protein	unknown	unknown	gnl\|CDD\|371891
NZ_CP006027.1\|WP_000517476.1\|3493102_3493414_-\|cell-division-protein-FtsB	unknown	unknown	gnl\|CDD\|179156
NZ_CP006027.1\|WP_001050400.1\|3502793_3504302_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|236613
NZ_CP006027.1\|WP_001173673.1\|3493980_3494586_-\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|179661
NZ_CP006027.1\|WP_000312398.1\|3499018_3499936_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NZ_CP006027.1\|WP_001290641.1\|3508549_3510262_-\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	unknown	unknown	gnl\|CDD\|237402
NZ_CP006027.1\|WP_024221755.1\|3498732_3499017_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	cd09648_cas2_CAS-I-E	gnl\|CDD\|236930
NZ_CP006027.1\|WP_000490426.1\|3497174_3498212_+\|alkaline-phosphatase-isozyme-conversion-aminopeptidase	unknown	unknown	gnl\|CDD\|182299
NZ_CP006027.1\|WP_000752798.1\|3502318_3502801_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09670_cse2gr11_CAS-I-E	gnl\|CDD\|187801
NZ_CP006027.1\|WP_000372392.1\|3496014_3496923_-\|sulfate-adenylyltransferase-subunit-CysD	unknown	unknown	gnl\|CDD\|235375
NZ_CP006027.1\|WP_000568924.1\|3490848_3491898_-\|tRNA-pseudouridine(13)-synthase-TruD	unknown	unknown	gnl\|CDD\|234884
NZ_CP006027.1\|WP_000064440.1\|3501238_3502306_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	cd09646_cas7_CAS-I-E	gnl\|CDD\|273843
NZ_CP006027.1\|WP_000246160.1\|3492373_3493084_-\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
NZ_CP006027.1\|WP_001090340.1\|3494585_3496013_-\|sulfate-adenylyltransferase-subunit-CysN	unknown	unknown	gnl\|CDD\|235349
NZ_CP006027.1\|WP_000433160.1\|3504716_3507383_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|182031
NZ_CP006027.1\|WP_000039862.1\|3507741_3508476_-\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NZ_CP006027.1\|WP_001258268.1\|3500537_3501212_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|273842
NZ_CP006027.1\|WP_001295182.1\|3490106_3490868_-\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732
NZ_CP006027.1\|WP_001219242.1\|3491894_3492374_-\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851

Protein	Function_ID	Function_description	E-value
NZ_CP006027.1\|WP_000281400.1\|3499951_3500551_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|273869	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1974 from Chlorobium tepidum, is found in the Ecoli subtype of CRISPR/Cas regions and is designated Cse3 (CRISPR/Cas Subtype Ecoli protein 3). The representative of this family from Thermus thermophilus HB8 (TTHB192) has been crystallized and found to have a structure consisting of two domains with opposing parallel beta-sheets known as a beta-sheet platform. This structure is similar to those found in the Sex-lethal protein and poly(A)-binding protein. This structure is consistent with an RNA-binding function.	1.81669e-101
NZ_CP006027.1\|WP_001246103.1\|3493607_3493931_-\|DUF3561-family-protein	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	3.44794e-52
NZ_CP006027.1\|WP_000517476.1\|3493102_3493414_-\|cell-division-protein-FtsB	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	5.55235e-62
NZ_CP006027.1\|WP_001050400.1\|3502793_3504302_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|236613	PRK09693, PRK09693, Cascade antiviral complex protein; Validated.	0
NZ_CP006027.1\|WP_001173673.1\|3493980_3494586_-\|adenylyl-sulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	7.34447e-148
NZ_CP006027.1\|WP_000312398.1\|3499018_3499936_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	4.53526e-158
NZ_CP006027.1\|WP_001290641.1\|3508549_3510262_-\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0
NZ_CP006027.1\|WP_024221755.1\|3498732_3499017_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	4.492e-63
NZ_CP006027.1\|WP_000490426.1\|3497174_3498212_+\|alkaline-phosphatase-isozyme-conversion-aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
NZ_CP006027.1\|WP_000752798.1\|3502318_3502801_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187801	cd09670, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	1.51297e-33
NZ_CP006027.1\|WP_000372392.1\|3496014_3496923_-\|sulfate-adenylyltransferase-subunit-CysD	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
NZ_CP006027.1\|WP_000568924.1\|3490848_3491898_-\|tRNA-pseudouridine(13)-synthase-TruD	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
NZ_CP006027.1\|WP_000064440.1\|3501238_3502306_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	8.03918e-152
NZ_CP006027.1\|WP_000246160.1\|3492373_3493084_-\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	2.38724e-119
NZ_CP006027.1\|WP_001090340.1\|3494585_3496013_-\|sulfate-adenylyltransferase-subunit-CysN	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
NZ_CP006027.1\|WP_000433160.1\|3504716_3507383_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|182031	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3.	0
NZ_CP006027.1\|WP_000039862.1\|3507741_3508476_-\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	3.61111e-137
NZ_CP006027.1\|WP_001258268.1\|3500537_3501212_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|273842	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is part of the ECOLI subtype CRISPR/Cas locus, and now characterized as part of the CASCADE complex of that system. It shares a small N-terminal homology region with members of several other CRISPR/Cas subtypes, and we view the families that share this region as being Cas5.	2.51923e-102
NZ_CP006027.1\|WP_001295182.1\|3490106_3490868_-\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	1.92279e-150
NZ_CP006027.1\|WP_001219242.1\|3491894_3492374_-\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	1.56248e-104

>NZ_CP006027.1|WP_000490426.1|3497174_3498212_+|alkaline-phosphatase-isozyme-conversion-aminopeptidase
MFSALRHRTAALALGVCFILPVHASSPKPGDFANTQARHIATFFPGRMTGTPAEMLSADYIRQQFQQMGYRSDIRTFNSRYIYTARDNRKSWHNVTGSTVIAAHEGKAPQQIIIMAHLDTYAPLSDADADANLGGLTLQGMDDNAAGLGVMLELAERLKNTPTEYGIRFVATSGEEEGKLGAENLLKRMSDTEKKNTLLVINLDNLIVGDKLYFNSGVKTPEAVRKLTRDRALAIARSHGIAATTNPGLNKNYPKGTGCCNDAEIFDKAGIAVLSVEATNWNLGNKDGYQQRAKTAAFPAGNSWHDVRLDNQQHIDKALPGRIERRCRDVMRIMLPLVKELAKAS
>NZ_CP006027.1|WP_000372392.1|3496014_3496923_-|sulfate-adenylyltransferase-subunit-CysD
MDQKRLTHLRQLEAESIHIIREVAAEFSNPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYEFRDRTAKAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWHNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMIDDNRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESNAQTLPEIIEEMLVSTTSERQGRVIDRDQAGSMELKKRQGYF
>NZ_CP006027.1|WP_001090340.1|3494585_3496013_-|sulfate-adenylyltransferase-subunit-CysN
MNTALAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLMDYSEETFTRIREDYLTFAGQLPGNLDIRFVPLSALEGDNVASQSESMPWYSGPTLLEVLETVEIQRVVDAQPMRFPVQYVNRPNLDFRGYAGTLASGRVEVGQRVKVLPSGVESNVARIVTFDGDREEAFAGEAITLVLTDEIDISRGDLLLAADEALPAVQSASVDVVWMAEQPLSPGQSYDIKIAGKKTRARVDGIRYQVDINNLTQREVENLPLNGIGLVDLTFDEPLVLDRYQQNPVTGGLIFIDRLSNVTVGAGMVHEPVSQATAAPSEFSAFELELNALVRRHFPHWGARDLLGDK
>NZ_CP006027.1|WP_001173673.1|3493980_3494586_-|adenylyl-sulfate-kinase
MALHDENVVWHSHPVTVQQRELHHGHRGVVLWFTGLSGSGKSTVAGALEEALHKLGVSTYLLDGDNVRHGLCSDLGFSDADRKENIRRVGEVANLMVEAGLVVLTAFISPHRAERQMVRERVGEGRFIEVFVDTPLAICEARDPKGLYKKARAGELRNFTGIDSVYEAPESAEIHLNGEQLVTNLVQQLLDLLRQNDIIRS
>NZ_CP006027.1|WP_001246103.1|3493607_3493931_-|DUF3561-family-protein
MRNSHNITLTNNDSLTEDEETTWSLPGAVVGFISWLFALAMPMLIYGSNTLFFFIYTWPFFLALMPVAVVVGIALHSLMDGKLRYSIVFTLMTVGIMFGALFMWLLG
>NZ_CP006027.1|WP_000517476.1|3493102_3493414_-|cell-division-protein-FtsB
MGKLTLLLLAILVWLQYSLWFGKNGIHDYTRVNDDVAAQQATNAKLKARNDQLFAEIDDLNGGQEALEERARNELSMTRPGETFYRLVPDASKRAQSAGQNNR
>NZ_CP006027.1|WP_000246160.1|3492373_3493084_-|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MATTHLDVCAVVPAAGFGRRMQTECPKQYLSIGNQTILEHSVYALLAHPRVKRVVIAISPGDSRFAQLSLANHPQITVVDGGDERADSVLAGLKAAGDAQWVLVHDAARPCLHQDDLARLLALSETSRTGGILAAPVRDTMKRAEPGKNAIAHTVDRNGLWHALTPQFFPRELLHDCMTRALNEGATITDEASALEYCGFHPQLVEGRADNIKVTRPEDLALAEFYLTRTIHQENT
>NZ_CP006027.1|WP_001219242.1|3491894_3492374_-|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLIKATK
>NZ_CP006027.1|WP_000568924.1|3490848_3491898_-|tRNA-pseudouridine(13)-synthase-TruD
MIEFDNLTYLHGKPQGTGLLKANPEDFVVVEDLGFEPDGEGEHILVRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDLSAFQLEGCQVLEYARHKRKLRLGALKGNAFTLVLREVSNRDDVEQRLIDICVKGVPNYFGAQRFGIGGSNLQGALRWAQTNTPVRDRNKRSFWLSAARSALFNQIVAERLKKADVNQVVDGDALQLAGRGSWFVATTEELAELQRRVNDKELMITAALPGSGEWGTQREALAFEQAAVAAETELQALLVREKVEAARRAMLLYPQQLSWNWWDDVTVEIRFWLPAGSFATSVVRELINTTGDYAHIAE
>NZ_CP006027.1|WP_001295182.1|3490106_3490868_-|5'/3'-nucleotidase-SurE
MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFENGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLDGHKHYDTAAAVTCSILRALCKEPLRTGRILNINVPDLPLDQIKGIRVTRCGTRHPADQVIPQQDPRGNTLYWIGPPGGKCDAGPGTDFAAVDEGYVSITPLHVDLTAHSAQDVVSDWLNSVGVGTQW
>NZ_CP006027.1|WP_024221755.1|3498732_3499017_-|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MSMLVVVTENVPPRLRGRLAIWLLEVRAGVYVGDVSAKIREMIWEQISGLAEEGNVVMAWATNTESGFEFQTFGVNRRTPVDLDGLRLVSFLPF
>NZ_CP006027.1|WP_000312398.1|3499018_3499936_-|type-I-E-CRISPR-associated-endonuclease-Cas1
MAWLPLNPIPLKDRVSMIFLQYGQIDVIDGAFVLIDKTGIRTHIPVGSVACIMLEPGTRVSHAAVRLAAQVGTLLVWVGEAGIRVYASGQPGGARSDKLLYQAKLALDEDLRLKVVRKMFELRFGEPAPARRSVEQLRGIEGSRVRATYALLAKQYGVTWNGRRYDPKDWEKGDTVNQCISAATSCLYGVTEAAILAAGYVPAIGFVHTGKPLSFVYDIADIIKFDTVVPKAFEIARRNPGEPDREVRLACRDIFRSSKTLAKLIPLIEDVLAAGEIQPPAPPEDAQPVAIPLPVSLGDAGHRSS
>NZ_CP006027.1|WP_000281400.1|3499951_3500551_-|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSKVIIARAWSRDLYQLHQGLWHLFPNRPDAARDFLFHVEKRNTPEGCHVLLQSAQMPVSTAVATVIKTKQVEFQLQVGVPLYFRLRANPIKTILDNQKRLDSKGNIKRCRVPLIKEAEQIAWLQRKLGNAARVEDVHPISERPQYFSGDGKSGKIQTVCFEGVLTINDAPALIDLVQQGIGPAKSMGCGLLSLAPL
>NZ_CP006027.1|WP_001258268.1|3500537_3501212_-|type-I-E-CRISPR-associated-protein-Cas5/CasD
MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQFAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKALLNYEPVGGDIYSEESVTGDHLKFTARDEPMITLPRQFASREWYVIKGGMDVSQ
>NZ_CP006027.1|WP_000064440.1|3501238_3502306_-|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MSNFINIHVLISHSPSCLNRDDMNMQKDAIFGGKRRVRISSQSLKRAMRKSDYYAQNIGESSLRTIHLAQLRDVLRQKLGERFDQKIIDKTLALLSGKLVDEAEKISADAVTPWVVGEIAWFCEQVAKAEADNLDDKKLLKVLKEDIAAIRVNLQQGVDIALSGRMATSGMMSELGKVDGAMSIAHAITTHQVDSDIDWFTAVDDLQEQGSAHLGTQEFSSGVFYRYANINLAQLQENLGGASREQALEIATHVVHMLATEVPGAKQRTYAAFNPADMVMVNFSDMPLSMANAFEKAVKAKDGFLQPSIQAFNQYWDRVANGYGLNGAAAQFSLSDVDPITAQVKQMPTLEQLKS
>NZ_CP006027.1|WP_000752798.1|3502318_3502801_-|type-I-E-CRISPR-associated-protein-Cse2/CasB
MADEIDAMALYRAWQQLDNGACAQIRRVSEPDELRDIPAFYRLVQPFGWENPRHQQALLRMVFCLSAGKNVIRHQDKKPEQTTGISLGRALANSGRINERRIFQLIRADRTADMVQLRRLLTHAEPVLDWPLMARMLTWWGKRERQQLLEDFVLTTNKNA
>NZ_CP006027.1|WP_001050400.1|3502793_3504302_-|type-I-E-CRISPR-associated-protein-Cse1/CasA
MNLLIDNWIPVRPRNGGKVQIINLQSLYCSRDQWRLSLPRDDMELAALALLVCIGQIIAPAKDDVEFRHRIMNPLTEDEFQQLIAPWIDMFYLNHAEHPFMQTKGVKANDVTPMEKLLAGVSGATNCAFVNQPGQGEALCGGCTAIALFNQANQAPGFGGGFKSGLRGGTPITTFVRGIDLRSTVLLNVLTIPRLQKQFPNESHTENQPTWIKPVKPNESVPASSIGFVRGLFWQPAHIELCDPIGIGKCSCCGQESNLRYTGFLKEKFTFTVNGLWPHPHSPCLVTVKKGEVEEKFLAFTTSAPSWTQISRVVVDKIIQNENGNRVAAVVNQFRNIAPQSPLELIMGGYRNNQASILERRHDVLMFNQGWQQYGNVINEIVTVGLGYKTALRKALYTFAEGFKNKDFKGAGVSVHETAERHFYRQSELLIPDVLANVNFSQADEVIADLRDKLHQLCEMLFNQSVAPYAHHPKLISTLALARATLYKHLRELKPQGGPSNG
>NZ_CP006027.1|WP_000433160.1|3504716_3507383_-|CRISPR-associated-helicase/endonuclease-Cas3
MEPFKYICHYWGKSSKSLTKGNDIHLLIYHCLDVAAVADCWWDQSVVLQNTFCRNEMLSKQRVKAWLLFFIALHDIGKFDIRFQYKSAESWLKLNPATPSLNGPSTQMCRKFNHGAAGLYWFNQDSLSEQSPGDFFSFFDAAPHPYESWFPWVEAVTGHHGFILHSQDQDKSRWEMPASLASYAAQDKQAREEWISVLEALFLTPAGLSINDIPPDCSSLLAGFCSLADWLGSWTTTDTFLFKEDAPSGIQAVRTYFQDRQQDACRVLALSGLVSNKRRYDGVHALLDNGYQPRQLQVLVDALPTAPGLTVIEAPTGSGKTETALAYAWKLIDQQLAESVIFALPTQATANAMLSRMEANASRLFTSPNLILAHGNSRFNHLFQSIKSRAFTEQGQEEAWVQCCQWLSQSNKKVFLGQIGVCTIDQVLISVLPVKHRFIRGLGIGRSVLIVDEVHAYDTYMNGLLEAVLKAQADVGGSVILLSATLPMKQKQKVLDTYGLHTDPVENNSAYPLINWRGVNGAQRFDLLAHPEQLPPRFSIQPEPIYLADMLPDLTMLERMIAAANAGAQVCLICNLVDVAQLCFQRLKELNDTQVDIDLFHARFTLNDRREKENRVISNFGKNGERNVGRILVATQVVEQSLDVDFDWLITQHCPADLLFQRLGRLHRHHRKYRPAGFEIPLATVLLPDGEGYGRHEHIYSNVRVMWRTQQHIEELNGASLFFPDAYRQWLDSIYDDAEMDEPEWVIKGMDKFESAECEKRFKARKVLQWAEEYSLQDNDETILAVTRDGEMSLPLLPYVQTSSGKQLLDGQVYEDLSHEQQYEALALNRVNVPFTWKRSFSEVVDEDGLLWLEGKQNQDGWFWQGNSIVITYTGDEGMTRVIPANPK
>NZ_CP006027.1|WP_000039862.1|3507741_3508476_-|phosphoadenosine-phosphosulfate-reductase
MSKLDLNALNELPKVDRILALAETNAQLEKLDAEGRVAWALDNLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYRFIDELTDKLKLNLKVYRATESAAWQEARYGKLWEQGVEGIEKYNDINKVEPMNRALKELNAQTWFAGLRREQSGSRANLPVLAIQRGVFKVLPIIDWDNRTIYQYLQKHGLKYHPLWDEGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>NZ_CP006027.1|WP_001290641.1|3508549_3510262_-|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit
MSEKHPGPLVVEGKLADAERMKLESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAEQKLEPRHAMLLRCRLPGGVITTKQWQAIDKFAADNTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGVETFKAEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDDNWHLTLFIENGRILDYPGRPLKTGLLEIAKIHKGDFRITANQNLIIAGVPESEKAKIERIAKESGLMNAVTPQRENSMACVSFPTCPLAMAEAERFLPSFIDNIDNLMAKHGVSDEHIVMRVTGCPNGCGRAMLAEVGLVGKAPGRYNLHLGGNRIGTRIPRMYKENITEPEILASLDELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDLWD

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Crispr_ID: NZ_CP006027_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP006027_5

3524112-3524323

Unclear

I-E

Consensus_repeat	Method
GCGGTTTATCCCCGCTGGCGCGGGGAACTC	CRISPRCasFinder
GCGGTTTATCCCCGCTGGCGCGGGGAACTC	CRT

3 spacers

The CRISPR arrays of NZ_CP006027_5

>merge|NZ_CP006027|5|3524112-3524323|CRISPRCasFinder,CRT
GTGGTTTATCCCCACTGGCGCGGGGAACTTGAGCCCTGCCAGAATGGGGCCTCTTTTGTACCCGGTTTATCCCCGCTGCCGCGGGGAACACATTTACTGATTGTACCAGGTAGGAAAAGATCGCGGTTTATCCCCGCTGGCGCGGGGAACTCATGATTGTCGATTTTTTCCGACAGGATTTTGCGGTTTATCCCCGCTGGCGCGGGGAACTC

>NZ_CP006027|5|5|3524112-3524323|CRISPRCasFinder
GTGGTTTATCCCCACTGGCGCGGGGAACTT	GAGCCCTGCCAGAATGGGGCCTCTTTTGTAC
CCGGTTTATCCCCGCTGCCGCGGGGAACAC	ATTTACTGATTGTACCAGGTAGGAAAAGATC
GCGGTTTATCCCCGCTGGCGCGGGGAACTC	ATGATTGTCGATTTTTTCCGACAGGATTTT
GCGGTTTATCCCCGCTGGCGCGGGGAACTC

>NZ_CP006027|5|2|3524112-3524323|CRT
GTGGTTTATCCCCACTGGCGCGGGGAACTT	GAGCCCTGCCAGAATGGGGCCTCTTTTGTAC
CCGGTTTATCCCCGCTGCCGCGGGGAACAC	ATTTACTGATTGTACCAGGTAGGAAAAGATC
GCGGTTTATCCCCGCTGGCGCGGGGAACTC	ATGATTGTCGATTTTTTCCGACAGGATTTT
GCGGTTTATCCCCGCTGGCGCGGGGAACTC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP006027.1\|WP_000581937.1\|3533584_3533833_-\|type-II-toxin-antitoxin-system-antitoxin-MazE	unknown	unknown	gnl\|CDD\|182082
NZ_CP006027.1\|WP_001164566.1\|3520753_3522031_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|349949
NZ_CP006027.1\|WP_001116197.1\|3514358_3514934_+\|glycerol-3-phosphate-responsive-antiterminator	unknown	unknown	gnl\|CDD\|224865
NZ_CP006027.1\|WP_000109526.1\|3514081_3514342_+\|ferredoxin-family-protein	unknown	unknown	gnl\|CDD\|225289
NZ_CP006027.1\|WP_024221756.1\|3525505_3526108_+\|LemA-family-protein	unknown	unknown	gnl\|CDD\|224618
NZ_CP006027.1\|WP_000059279.1\|3518125_3519580_-\|FAD-binding-oxidoreductase	unknown	unknown	gnl\|CDD\|223354
NZ_CP006027.1\|WP_001217977.1\|3527029_3528178_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224429
NZ_CP006027.1\|WP_001400806.1\|3519649_3520435_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|187605
NZ_CP006027.1\|WP_001400800.1\|3515080_3515941_-\|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	unknown	unknown	gnl\|CDD\|224936
NZ_CP006027.1\|WP_000971926.1\|3516694_3518104_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340929
NZ_CP006027.1\|WP_001400802.1\|3515937_3516717_-\|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein	unknown	unknown	gnl\|CDD\|224997
NZ_CP006027.1\|WP_025404443.1\|3526121_3527015_+\|YgcG-family-protein	unknown	unknown	gnl\|CDD\|224429
NZ_CP006027.1\|WP_001071643.1\|3532387_3533179_-\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
NZ_CP006027.1\|WP_000039734.1\|3522057_3523536_+\|sugar-kinase	unknown	unknown	gnl\|CDD\|212662
NZ_CP006027.1\|WP_000036723.1\|3529136_3530435_-\|phosphopyruvate-hydratase	unknown	unknown	gnl\|CDD\|234617
NZ_CP006027.1\|WP_122993989.1\|3528174_3529077_+\|YgcG-family-protein	unknown	unknown	gnl\|CDD\|224429
NZ_CP006027.1\|WP_001199979.1\|3524661_3525333_-\|7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|275126
NZ_CP006027.1\|WP_000254747.1\|3533249_3533585_-\|endoribonuclease-MazF	unknown	unknown	gnl\|CDD\|182138
NZ_CP006027.1\|WP_000210878.1\|3530522_3532160_-\|CTP-synthase-(glutamine-hydrolyzing)	unknown	unknown	gnl\|CDD\|235437
NZ_CP006027.1\|WP_001400799.1\|3512819_3514091_+\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|182194

Protein	Function_ID	Function_description	E-value
NZ_CP006027.1\|WP_000581937.1\|3533584_3533833_-\|type-II-toxin-antitoxin-system-antitoxin-MazE	gnl\|CDD\|182082	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE.	6.19513e-48
NZ_CP006027.1\|WP_001164566.1\|3520753_3522031_+\|MFS-transporter	gnl\|CDD\|349949	cd06174, MFS, Major Facilitator Superfamily. The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated.	3.90648e-29
NZ_CP006027.1\|WP_001116197.1\|3514358_3514934_+\|glycerol-3-phosphate-responsive-antiterminator	gnl\|CDD\|224865	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription].	3.97941e-88
NZ_CP006027.1\|WP_000109526.1\|3514081_3514342_+\|ferredoxin-family-protein	gnl\|CDD\|225289	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion].	1.81311e-41
NZ_CP006027.1\|WP_024221756.1\|3525505_3526108_+\|LemA-family-protein	gnl\|CDD\|224618	COG1704, LemA, Uncharacterized conserved protein [Function unknown].	1.11314e-77
NZ_CP006027.1\|WP_000059279.1\|3518125_3519580_-\|FAD-binding-oxidoreductase	gnl\|CDD\|223354	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion].	7.66099e-83
NZ_CP006027.1\|WP_001217977.1\|3527029_3528178_+\|hypothetical-protein	gnl\|CDD\|224429	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only].	4.97982e-63
NZ_CP006027.1\|WP_001400806.1\|3519649_3520435_-\|SDR-family-oxidoreductase	gnl\|CDD\|187605	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs. Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	5.32625e-138
NZ_CP006027.1\|WP_001400800.1\|3515080_3515941_-\|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	gnl\|CDD\|224936	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion].	5.28122e-88
NZ_CP006027.1\|WP_000971926.1\|3516694_3518104_-\|MFS-transporter	gnl\|CDD\|340929	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily. This subfamily is composed of Acinetobacter sp. Cis,cis-muconate transport protein (MucK), Escherichia coli putative sialic acid transporter 1, and similar proteins. MucK functions in the uptake of muconate and allows Acinetobacter calcoaceticus ADP1 (BD413) to grow on exogenous cis,cis-muconate as the sole carbon source. The MucK subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.98391e-51
NZ_CP006027.1\|WP_001400802.1\|3515937_3516717_-\|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein	gnl\|CDD\|224997	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion].	7.81367e-64
NZ_CP006027.1\|WP_025404443.1\|3526121_3527015_+\|YgcG-family-protein	gnl\|CDD\|224429	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only].	1.28031e-91
NZ_CP006027.1\|WP_001071643.1\|3532387_3533179_-\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	9.36315e-160
NZ_CP006027.1\|WP_000039734.1\|3522057_3523536_+\|sugar-kinase	gnl\|CDD\|212662	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins. This subfamily consists of uncharacterized hypothetical bacterial proteins with similarity to Escherichia coli sugar kinase ygcE , whose functional roles are not yet clear. Escherichia coli ygcE is recognized by this model, but is not present in the alignment as it contains a deletion relative to other members of the group. These proteins belong to the FGGY family of carbohydrate kinases, the monomers of which contain two large domains, which are separated by a deep cleft that forms the active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain.	8.58462e-109
NZ_CP006027.1\|WP_000036723.1\|3529136_3530435_-\|phosphopyruvate-hydratase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
NZ_CP006027.1\|WP_122993989.1\|3528174_3529077_+\|YgcG-family-protein	gnl\|CDD\|224429	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only].	8.69099e-101
NZ_CP006027.1\|WP_001199979.1\|3524661_3525333_-\|7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	3.23739e-155
NZ_CP006027.1\|WP_000254747.1\|3533249_3533585_-\|endoribonuclease-MazF	gnl\|CDD\|182138	PRK09907, PRK09907, endoribonuclease MazF.	7.52013e-73
NZ_CP006027.1\|WP_000210878.1\|3530522_3532160_-\|CTP-synthase-(glutamine-hydrolyzing)	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
NZ_CP006027.1\|WP_001400799.1\|3512819_3514091_+\|FAD-dependent-oxidoreductase	gnl\|CDD\|182194	PRK10015, PRK10015, oxidoreductase; Provisional.	1.08981e-124

>NZ_CP006027.1|WP_000039734.1|3522057_3523536_+|sugar-kinase
MSKKYIIGIDGGSQSTKVVMYDLEGNVVCEGKGLLQPMHTPDADTAEHPDDDLWASLCFAGHDLMSQFAGNKENIVGIGLGSIRCCRALLKADGTPAAPLISWQDARVTRPYEHTNPDVAYVTSFSGYLTHRLTGEFKDNIANYFGQWPVDYKSWAWSEDAAVMEKFNIPRHMLFDVQMPGTVLGQITPQAALATHFPAGLPVVCTTSDKPVEALGAGLLDDETAVISLGTYIALMMNGKALPKDPVAYWPIMSSIPQTLLYEGYGIRKGMWTVSWLRDMLGESLIQDARAQDLSPEDLLNKKASCVPPGCNGLMTVLDWLTNPWEPYKRGIMIGFDSSMDYAWIYRSILESVALTLKNNYDNMCNEMNHFAKHVIITGGGSNSDLFMQIFADVFNLPARRNAINGCASLGAAINTAVGLGLYPDYATAVDKMVRVKDIFMPVESNAKRYDAMNKGIFKDLTKHTDVILKKSYEVMHGELGNADSIQSWSNA
>NZ_CP006027.1|WP_001164566.1|3520753_3522031_+|MFS-transporter
MQHNSYRRWITLAIISFSGGVSFDLAYLRYIYQIPMAKFMGFSNTEIGLIMSTFGIAAIILYAPSGVIADKFSHRKMITSAMIITGLLGLLMATYPPLWVMLCIQVAFAITTILMLWSVSIKAASLLGDHSEQGKIMGWMEGLRGVGVMSLAVFTMWVFSRFAPDDSASLKTVIIIYSVVYILLGILCWFFVSDNNNLRSANNEEKQSFQLSDILAVLRISTTWYCSMVIFGVFTIYAILSYSTNYLTEMYGMSLVAASYMGIVINKIFRALCGPLGGIITTYSKVKSPTRVIQILSVLGLLALTALLVTNSNPQSVAMGIGLILLLGFTCYASRGLYWACPGEARTPSYIMGTTVGICSVIGFLPDVFVYPIIGHWQDTLPAAEAYRNMWLMGMAALAMVIVFTFLLFQKIRTADSAPAIASSK
>NZ_CP006027.1|WP_001400806.1|3519649_3520435_-|SDR-family-oxidoreductase
MSIESLNAFSMDFFSLKGKTAIVTGGNSGLGQAFAMALAKAGANVFIPSFVKDNGETKEMIENQGVEVDFMQVDITAEGAPQKIIAACCERFGTVDILVNNAGICKLNKVLDFGRADWDPMIDVNLTAAFELSYEAAKIMIPQKSGKIINICSLFSYLGGQWSPAYSATKHALAGFTKAYCDELGQYNIHVNGIAPGYYATDITLATRSNPETNQRVLDHIPANRWGDTQDLMGAAVFLASPASNYVNGHLLVVDGGYLVR
>NZ_CP006027.1|WP_000059279.1|3518125_3519580_-|FAD-binding-oxidoreductase
MSLSRAAIVDQLKEIFGADRVITDKTVLKKNSIDRFRKFPDIHGIYTLPIPAAVVKLGSTEQVSRVLNFMNAHKINGVPRTGASATEGGLETVVENSVVLDGSAMNQIINIDIENMQATAQCGVPLEVLENALREKGYTTGHSPQSKPLAQMGGLVATRSIGQFSTLYGAIEDMVVGLEAVLADGTVTRIKNVPRRAAGPDIRHIIIGNEGALCYITEVTVKIFKFTPENNLFYGYILEDMKTGFNILREIMVEGYRPSIARLYDAEDGTQHFTHFADGKCVLIFMAEGNPRIAKATGEGIAEIVARYPQCQRVDSKLIETWFNNLNWGPDKVAAERVQILKTGNMGFTTEVSGCWSCIHEIYESVINRIRTEFPHADDITMLGGHSSHSYQNGTNMYFVYDYNVVDCKPEEEIDKYHNPLNKIICEETIRLGGSMVHHHGIGKHRVHWSKLEHGSAWALLEGLKKQFDPNGIMNTGTIYPIEK
>NZ_CP006027.1|WP_000971926.1|3516694_3518104_-|MFS-transporter
MMGRCLFGFSGEKPFLLPDNEGVKMNTSPVRMDDLPLNRFHCRIAALTFGAHLTDGYVLGVIGYAIIQLTPAMQLTPFMAGMIGGSALLGLFLGSLVLGWISDHIGRQKIFTFSFLLITLASFLQFFATTPEHLIGLRILIGIGLGGDYSVGHTLLAEFSPRRHRGILLGAFSVVWTVGYVLASIAGHHFISESPEAWRWLLASAALPALLITLLRWGTPESPRWLLRQGRFAEAHSIVHRYFGPHVLLGDEVATATHKHIKTLFSSRYWRRTAFNSVFFVCLVIPWFVIYTWLPTIAQTIGLEDALTASLMLNALLIVGALLGLVLTHLLAHRKFLLGSFLLLAATLVVMACLPSGSSLTLLLFVLFSTTISAVSNLVGILPAESFPTDIRSLGVGFATAMSRLGAAVSTGLLPWVLAQWGMQVTLLILAAVLLVGFVVTWLWAPETKALPLVAAGNVGGANEHSVSV
>NZ_CP006027.1|WP_001400802.1|3515937_3516717_-|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein
MNILLAFKAEPDAGMLAEKEWQAAAQGNSGPDVSLLRSLLGADEQAAAALLLAQRKNGTPMSLTALSMGDERALHWLRYLMALGFEEAVLLETAADLRFAPEFVARHIAEWQRQNPLDLIITGCQSSEGQNGQTPFLLAEMLGWPCFTQVERFTLDALFITLEQRTEHGLRCCRVRLPAVIAVRQCGEVALPVPGMRQRMAAGKAEIIRKTVAAEMPAMQCLQLARAEQRRGATLIDGQTVAEKAQKLWQNYLRQRMQP
>NZ_CP006027.1|WP_001400800.1|3515080_3515941_-|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein
MNIAIVTINQENAAIASWLAAQDFSGCTLAHWQIEPQPVVAEQVLDALVEQWQRTPANVVLFPPGTFGDELSTRLAWSLHGASICQVTSLEIPTVSVRKSHWGNALTATLQTEKRPLCLSLARQAGADKNATLPSGMQQLNIVPGALPDWLVSTEDLKNVSRDPLAEARRVLVVGQGGEADNQEIAMLAEKLGAEVGYSRARVMNGGVDAEKVIGISGHLLAPEVCIVVGASGAAALMAGVRNSKFVVAINHDASAAVFSQADVGVVDDWKVVLEALVTNIHADCQ
>NZ_CP006027.1|WP_001116197.1|3514358_3514934_+|glycerol-3-phosphate-responsive-antiterminator
MPFLHLLRQNPVIAAVKDNASLQLAIDSECQFISVLYGNICTISNIVKKIKNAGKYAFIHVDLLEGASNKEVVIQFLKLVTEADGIISTKASMLKAARAEGFFCIHRLFIVDSISFHNIDKQVAQSNPDCIEILPGCMPKVLGWVTEKIRQPLIAGGLVCDEEDARNAINAGVVALSTTNTGVWTLAKKLL
>NZ_CP006027.1|WP_000109526.1|3514081_3514342_+|ferredoxin-family-protein
MSVARNLWRVADAPHIVPADSVERQTAERLINACPAGLFSLTPEGDLRIDYRSCLECGTCRLLCDESTLQQWRYPPSGFGITYRFG
>NZ_CP006027.1|WP_001400799.1|3512819_3514091_+|FAD-dependent-oxidoreductase
MEDDCDIIIIGAGIAGTACALRCARAGLSVLLLERAEIPGSKNLSGGRLYTHALAELLPQFHLTAPLERRITHESLSLLTPDCATTFSSLQPGGESWSVLRARFDPWLVAEAEKEGVECIPGATVDALYEENGRVCGVICGDDILRARYVVLAEGANSVLAERHGLVTRPAGEAMALGIKEVLSLETSAIEERFHLENNEGAALLFSGGICDDLPGGAFLYTNQQTLSLGIVCPLSSLTQSRVPASELLARFKTYPAVRPLIKNTESLEYGAHLVPEGGLHSMPVQYAGNGWLLVGDALRSCVNTGISVRGMDMALTGAQAAAQTLISACQHREPQNLFPLYHHNVERSLLWDVLQRYQHVPALLQRPGWYRAWPALMQDISRDLWDQGDKPVPPLRQLFWRHLRRHGLWHLAGDVIRSLRCL
>NZ_CP006027.1|WP_001199979.1|3524661_3525333_-|7-carboxy-7-deazaguanine-synthase-QueE
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWEKLEDREVSLFSILAKTKESDKWGAASSEDLLAVISRQGYTARHVVITGGEPCIHDLLPLTDLLEKNGFSCQIETSGTHEVRCTPNTWVTVSPKLNMRGGYEVLSQALERANEIKHPVGRVRDIEALDELLATLTDDKPRVIALQPISQKDDATRLCIETCIARNWRLSMQTHKYLNIA
>NZ_CP006027.1|WP_024221756.1|3525505_3526108_+|LemA-family-protein
MLRIFIVIIFIFNLSGCGYNDIQTYDEQVNASWSEVLNQYQRRADLIPNLVACIKGYSNHEKDVLEAVTLARSQANRASSDLQQAPGDAQKLQAWQQAQAQVTRTLGQLTIISERYPELKAQELYQNLMVQLEGSENRIAVARGRYIKAIEQYNVTIRKFPAVLTAKVMDYTPKKNYLPDDVAAVSKAPTIDFSQNANAH
>NZ_CP006027.1|WP_025404443.1|3526121_3527015_+|YgcG-family-protein
MRNFIFLMAFFCSSVFATQIPVPESPKYVNDLTGTLTNSEVNTLTNQIKALTQKSHAQLVVLVVETTGDETIEQYATRVFDSWKPGDKDRDDGVLLLVAWQDHTVRIEIGYGLEGIITDAQSGQIIRNSIIPAFKNGDLAGGLQKGISDIESRLTGNNLATITPTDHPLPFSGWWALLVWAIVLTFISARGYIKTLGVICFAAIVLAFVLPIAGFSGSWGVLATLLCFATPFLAVAIAFTPFGKKVRDLMRDVNQPSRHTRSNSSSHYSSSSSSSFNNDNFSGGGGSSGGGGASGRW
>NZ_CP006027.1|WP_001217977.1|3527029_3528178_+|hypothetical-protein
MRIFLLLLMLCGFQVFAEQWPSVTDLTGTLTTEEQTALTQQLQTLEQQNHFQVAVLVTPTTGGKNIKLAASQRYGVYHWKPVGEKRYGEGILILVVWPEGLASMKIGHGLEQMLPPEQAAQIVRYHMQPEFEKNNLFAGLTGGIESIAQFTHIKANLSPLDALANHLFANPQRSLPCLAWTLLMIVAIVVLWRFASRPRRGIWMISMITPMVWFFSFQDDVIIRRVSIVCFSLLLATTCKQRLAVVFNLCRVFPMMLAPKNKNAKVKKQKKTPQVRESGRNSLFVVMLIIIVGWCLVFASNKDIAFISTIIGLIDHFIGPITIAGIVLLIIVAKFTGNLKLGSGEKSNRKTGNRNAHSRSSSRNSFRGGGGSSGGGGSSGRW
>NZ_CP006027.1|WP_122993989.1|3528174_3529077_+|YgcG-family-protein
MIVMRLIFILLALWSLPGLAQQIAVPELRQQVTDITGTLSTSEQQSLTQQLQDITHKTRAQVAVLVVPSTGDDSIEQYATRVFDSWKLGDKQRNDGILLLVAREDHAVRIEVGYGLEGVVTDLQAAKIIRDILIPAFKSDDLMGGLTLASENIGALLLNGELSEDKGDYYSINPPIPLSLAVIILLAVLSYFIVFTDPSNLPWITLTGAIYGMVFLYVAEPGPWTNLIVACGMLTPFAIVPLVIFWLIVNKKLRAKYKKLSKERASRKGSSSSSSGRGSSGGGVSGGGGSSGGGGASGRW
>NZ_CP006027.1|WP_000036723.1|3529136_3530435_-|phosphopyruvate-hydratase
MSKIVKIIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVAAVNGPIAQALIGKDAKDQAGIDKIMIDLDGTENKSKFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKAKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>NZ_CP006027.1|WP_000210878.1|3530522_3532160_-|CTP-synthase-(glutamine-hydrolyzing)
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQMAVEIGREHTLFMHLTLVPYMAASGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISLKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIFEEANPVSEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVSVNIKLIDSQDVETRGVEILKGLDAILVPGGFGYRGVEGMITTARFARENNIPYLGICLGMQVALIDYARHVANMENANSTEFVPDCKYPVVALITEWRDENGNVEVRSEKSDLGGTMRLGAQQCQLVDDSLVRQLYNAPTIVERHRHRYEVNNMLLKQIEDAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAASEFQKRQAK
>NZ_CP006027.1|WP_001071643.1|3532387_3533179_-|nucleoside-triphosphate-pyrophosphohydrolase
MNQIDRLLTIMQRLRDPENGCPWDKEQTFATIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFADSSAENSSEVLARWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCANVGFDWTTLGPVVDKVYEEIDEVMYEARQAVIDQAKLEEEMGDLLFATVNLARHLGTKAEIALQKANEKFERRFREVERIVAARGLEMTGVDLETMEEVWQQVKRQEIDL
>NZ_CP006027.1|WP_000254747.1|3533249_3533585_-|endoribonuclease-MazF
MVSRYVPDMGDLIWVDFDPTKGSEQAGHRPAVVLSPFMYNNKTGMCLYVPCTTQSKGYPFEVVLSGQERDGVALADQVKSIAWRARGATKKGTVAPEELQLIKAKINVLIG
>NZ_CP006027.1|WP_000581937.1|3533584_3533833_-|type-II-toxin-antitoxin-system-antitoxin-MazE
MIHSSVKRWGNSPAVRIPATLMQALNLNIDDEVKIDLVDGKLIIEPVRKEPVFTLAELVNDITPENLHENIDWGEPKDKEVW

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Crispr_ID: NZ_CP006027_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP006027_6

5392979-5393128

Orphan

Consensus_repeat	Method
CGCGTCTTATCAGGCCTACGAGTTCGGTGCTGTGTAGGTCGGATAAGGCGTTCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP006027_6

>merge|NZ_CP006027|6|5392979-5393128|CRISPRCasFinder
CGCGTCTTATCAGGCCTACGAGTTCGGTGCTGTGTAGGTCGGATAAGGCGTTCATGCCGCATCCGACAATAACAGCATTGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCA

>NZ_CP006027|6|6|5392979-5393128|CRISPRCasFinder
CGCGTCTTATCAGGCCTACGAGTTCGGTGCTGTGTAGGTCGGATAAGGCGTTCA	TGCCGCATCCGACAATAACAGCATTGCCTGATGCGACGCTTG
CGCGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP006027.1\|WP_000583470.1\|5383637_5384090_+\|YhcH/YjgK/YiaL-family-protein	unknown	unknown	gnl\|CDD\|225345
NZ_CP006027.1\|WP_000036446.1\|5384212_5385880_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006027.1\|WP_001295681.1\|5396042_5397125_+\|LPS-export-ABC-transporter-permease-LptG	unknown	unknown	gnl\|CDD\|237900
NZ_CP006027.1\|WP_000079663.1\|5388260_5389457_+\|DUF898-domain-containing-protein	unknown	unknown	gnl\|CDD\|226719
NZ_CP006027.1\|WP_025404512.1\|5387102_5387519_+\|ribonuclease-E-inhibitor-RraB	unknown	unknown	gnl\|CDD\|236876
NZ_CP006027.1\|WP_000012909.1\|5385936_5386941_-\|ornithine-carbamoyltransferase	unknown	unknown	gnl\|CDD\|179587
NZ_CP006027.1\|WP_001059397.1\|5387564_5388068_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP006027.1\|WP_000397144.1\|5393164_5394676_-\|leucyl-aminopeptidase	unknown	unknown	gnl\|CDD\|234863
NZ_CP006027.1\|WP_000500682.1\|5382115_5382829_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|183714
NZ_CP006027.1\|WP_122993992.1\|5404424_5404733_-\|N-acetylneuraminate-epimerase	unknown	unknown	gnl\|CDD\|225597
NZ_CP006027.1\|WP_001400713.1\|5397285_5398788_-\|DUF853-domain-containing-protein	unknown	unknown	gnl\|CDD\|283518
NZ_CP006027.1\|WP_000786399.1\|5392367_5392811_-\|DNA-polymerase-III-subunit-chi	unknown	unknown	gnl\|CDD\|235581
NZ_CP006027.1\|WP_000777278.1\|5404977_5406081_-\|HNH-endonuclease	unknown	unknown	gnl\|CDD\|224321
NZ_CP006027.1\|WP_025404513.1\|5403565_5404438_-\|HNH-endonuclease	unknown	unknown	gnl\|CDD\|225973
NZ_CP006027.1\|WP_000416999.1\|5400906_5402943_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006027.1\|WP_000628922.1\|5382899_5383493_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP006027.1\|WP_000416399.1\|5389512_5392368_-\|valine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235582
NZ_CP006027.1\|WP_001153034.1\|5403341_5403521_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227267
NZ_CP006027.1\|WP_000584114.1\|5394942_5396043_+\|LPS-export-ABC-transporter-permease-LptF	unknown	unknown	gnl\|CDD\|185075
NZ_CP006027.1\|WP_001400715.1\|5398917_5399937_-\|NADPH-dependent-aldehyde-reductase-Ahr	unknown	unknown	gnl\|CDD\|176186

Protein	Function_ID	Function_description	E-value
NZ_CP006027.1\|WP_000583470.1\|5383637_5384090_+\|YhcH/YjgK/YiaL-family-protein	gnl\|CDD\|225345	COG2731, EbgC, Beta-galactosidase, beta subunit [Carbohydrate transport and metabolism].	3.50239e-70
NZ_CP006027.1\|WP_122993992.1\|5404424_5404733_-\|N-acetylneuraminate-epimerase	gnl\|CDD\|225597	COG3055, COG3055, Uncharacterized protein conserved in bacteria [Function unknown].	3.77964e-38
NZ_CP006027.1\|WP_001295681.1\|5396042_5397125_+\|LPS-export-ABC-transporter-permease-LptG	gnl\|CDD\|237900	PRK15071, PRK15071, lipopolysaccharide ABC transporter permease; Provisional.	0
NZ_CP006027.1\|WP_000079663.1\|5388260_5389457_+\|DUF898-domain-containing-protein	gnl\|CDD\|226719	COG4269, COG4269, Predicted membrane protein [Function unknown].	2.39684e-150
NZ_CP006027.1\|WP_025404512.1\|5387102_5387519_+\|ribonuclease-E-inhibitor-RraB	gnl\|CDD\|236876	PRK11191, PRK11191, ribonuclease E inhibitor RraB.	1.72709e-68
NZ_CP006027.1\|WP_000012909.1\|5385936_5386941_-\|ornithine-carbamoyltransferase	gnl\|CDD\|179587	PRK03515, PRK03515, ornithine carbamoyltransferase subunit I; Provisional.	0
NZ_CP006027.1\|WP_001059397.1\|5387564_5388068_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	3.52162e-19
NZ_CP006027.1\|WP_000397144.1\|5393164_5394676_-\|leucyl-aminopeptidase	gnl\|CDD\|234863	PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional.	0
NZ_CP006027.1\|WP_000500682.1\|5382115_5382829_-\|SDR-family-oxidoreductase	gnl\|CDD\|183714	PRK12742, PRK12742, SDR family oxidoreductase.	7.90601e-150
NZ_CP006027.1\|WP_001400713.1\|5397285_5398788_-\|DUF853-domain-containing-protein	gnl\|CDD\|283518	pfam05872, DUF853, Bacterial protein of unknown function (DUF853). This family consists of several bacterial proteins of unknown function. BMEI1370 is thought to be an ATPase.	0
NZ_CP006027.1\|WP_000786399.1\|5392367_5392811_-\|DNA-polymerase-III-subunit-chi	gnl\|CDD\|235581	PRK05728, PRK05728, DNA polymerase III subunit chi; Validated.	5.53743e-66
NZ_CP006027.1\|WP_000777278.1\|5404977_5406081_-\|HNH-endonuclease	gnl\|CDD\|224321	COG1403, McrA, Restriction endonuclease [Defense mechanisms].	0.000364126
NZ_CP006027.1\|WP_025404513.1\|5403565_5404438_-\|HNH-endonuclease	gnl\|CDD\|225973	COG3440, COG3440, Predicted restriction endonuclease [Defense mechanisms].	2.82234e-127
NZ_CP006027.1\|WP_000628922.1\|5382899_5383493_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	9.13374e-10
NZ_CP006027.1\|WP_000416399.1\|5389512_5392368_-\|valine--tRNA-ligase	gnl\|CDD\|235582	PRK05729, valS, valyl-tRNA synthetase; Reviewed.	0
NZ_CP006027.1\|WP_001153034.1\|5403341_5403521_-\|hypothetical-protein	gnl\|CDD\|227267	COG4930, COG4930, Predicted ATP-dependent Lon-type protease [Posttranslational modification, protein turnover, chaperones].	1.09569e-29
NZ_CP006027.1\|WP_000584114.1\|5394942_5396043_+\|LPS-export-ABC-transporter-permease-LptF	gnl\|CDD\|185075	PRK15120, PRK15120, lipopolysaccharide ABC transporter permease LptF; Provisional.	0
NZ_CP006027.1\|WP_001400715.1\|5398917_5399937_-\|NADPH-dependent-aldehyde-reductase-Ahr	gnl\|CDD\|176186	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines.	7.65404e-169

>NZ_CP006027.1|WP_000786399.1|5392367_5392811_-|DNA-polymerase-III-subunit-chi
MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAESFVPHNLAGEGPRGGAPVEIAWPQKRSSSPRDILISLRTSFADFATAFTEVVDFVPYEDSLKQLARERYKAYRVAGFNLNTATWK
>NZ_CP006027.1|WP_000416399.1|5389512_5392368_-|valine--tRNA-ligase
MEKTYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMVVERKIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQMRRLGNSVDWERERFTMDEGLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPLADGAKTADGKDYLVVATTRPETLLGDTGVAVNPEDPRYKDLIGKYVILPLVNRRIPIVGDEHADMEKGTGCVKITPAHDFNDYEVGKRHALPMINILTFDGDIRESAQVFDTKGNESDVYSSEIPAEFQKLERFAARKAVVAAVDALGLLEEIKPHDLTVPYGDRGGVVIEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRDIQDWCISRQLWWGHRIPAWYDEAGNVYVGRNEEEVRKENNLGADVALRQDEDVLDTWFSSALWTFSTLGWPENTDALRQFHPTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDDEGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQLADKIRKRTEKQFPNGIEPHGTDALRFTLAALASTGRDINWDMKRLEGYRNFCNKLWNASRFVLMNTEGQDCGFNGGEMTLSLADRWILAEFNQTIKAYREALDSFRFDIAAGILYEFTWNQFCDWYLELTKPVMNGGTDAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKVLCGITADTIMLQPFPQYDASQVDEAALADTEWLKQAIVAVRNIRAEMNIAPGKPLELLLRGCSADAERRVNENRGFLQTLARLESITVLPADDKGPVSVTKIIDGAELLIPMAGLINKEDELARLAKEVAKIEGEISRIENKLANEGFVARAPEAVIAKEREKLEGYAEAKAKLIEQQAVIAAL
>NZ_CP006027.1|WP_000079663.1|5388260_5389457_+|DUF898-domain-containing-protein
MAQVINEMDVPSHSFVFHGTGERYFLICVVNVLLTIITLGIYLPWALMKCKRYLYANMEVNGQRFSYGITGGNVFVSCLVFVFFYFAILMTVSADMPLVGCVLTLSLLVLLIFMAAKGLRYQALMTSLNGVRFSFNCSLKGFWWVTFFLPILMAIGMGTVFFISTKMLHANSSSSVIMSVVLMAIVGIVSIGIFNGTLYSLVMSFLWSNTSFGIHRFKVKLDTTYCIKYAILAFLALLPFLAVAGYIIFDQILNEYDSSVYANDDIENLQQFMEMQRKMIIAQLIYYFGIAVSTSYLTVSLRNHFMSNLSLNDGRIRFRSTLTYHGMLYRMCALVVISGITGGLAYPLLKIWMIDWQAKNTYLLGDLDDLPLINKEEQPDKGFLASISRGIMPSLPFL
>NZ_CP006027.1|WP_001059397.1|5387564_5388068_-|GNAT-family-N-acetyltransferase
MNNIAPQSPVMRRLTLQDNPAIARVIRQVSAEYGLTADKGYTVADPNLDELYQVYSQPGHAYWVVEYEGEVVGGGGIAPLAGSESDICELQKMYFLPAIRGKGLAKKLALKAMEEAREMGFKRCYLETTAFLKEAIGLYEHLGFQHIDYALGCTGHVDCEVRMLREL
>NZ_CP006027.1|WP_025404512.1|5387102_5387519_+|ribonuclease-E-inhibitor-RraB
MANPEQLEEQREETRLIIEELLEDGSDPDALYTIEHHLSADDLETLEKAAVEAFKLGYEVTDPEELEVEDGDIVICCDILSECALNADLIDVQVEQLMTLAEKFDVEYDGWGTYFEDPNGEDGDDEDFVDEDDDGVRH
>NZ_CP006027.1|WP_000012909.1|5385936_5386941_-|ornithine-carbamoyltransferase
MSGFYHKHFLKLLDFTPAELNSLLQLAAKLKADKKSGKEEAKLTGKNIALIFEKDSTRTRCSFEVAAYDQGARVTYLGPSGSQIGHKESIKDTARVLGRMYDGIQYRGYGQEIVETLAEYAGVPVWNGLTNEFHPTQLLADLLTMQEHLPGKAFNEMTLVYAGDARNNMGNSMLEAAALTGLDLRLVAPQACWPEAALVTECRALAQQNGGNITLTEDVAKGVEGADFIYTDVWVSMGEAKEKWAERIALLRDYQVNSKMMQLTGNPEVKFLHCLPAFHDDQTTLGKKMAEEFGLHGGMEVTDEVFESAASIVFDQAENRMHTIKAVMVATLSN
>NZ_CP006027.1|WP_000036446.1|5384212_5385880_+|hypothetical-protein
MSKISDLNYSQHITLADNFKQKSEVLNTWRVGMNNFARNAEGQDNTRNILDPKTFLEFLVKIFTLGYVDFSKRSNEAGRNMMAHIESSSYIKNNDGSEIMKFVMNNPEGERADLSKVVIEITLSAFTTMGTRQGHTAIIFQQPDGSTNRYEGKSFERKDESSLHLITNKILACYQCEANKEIARLLNIPQELNNSQDLNNSQVSCKDSVDSTITDLLEKPLNNALLAIRKEHLLLMPYVCNESISYLLGEKGILKEIDDLNAVNNYLLNNKKATDNEINDIKVNLSHILIDSLDDAKVNLTPVIDSILETFLKSPYINDVRILDWCFNKIMQYFGDSEKIKYACSVINHIDFSRDQSKDFSCDQSKIKIAETLFFNLDKEPYKNSRKLQKLIWDKLVAYVNDFNLSNQEKSRLILRLFDDVKLLFNEVPVSILVNDIFLKDFFMKQPDFAKWYFYQLLKDYEGEQLYLNELGYVYGNEEKTNEIVNKLPGYVVKIFEEKIDNELKIRTRMMETLRDGKINIYDYINEKQLEKLNPPQDLRSAIEKIGWKNRPITA
>NZ_CP006027.1|WP_000583470.1|5383637_5384090_+|YhcH/YjgK/YiaL-family-protein
MIIGNIHNLQPWLPQELRQAIEHIKAHVTAETPKGKHDIEGNRLFYLISEDMTEPYEARRAEYHARYLDIQIVLKGQEGMTFSTQPAGTPDTDWLADKDIAFLPEGVDEKTVILNEGDFVVFYPGEVHKPLCAVGAPAQVRKAVVKMLMA
>NZ_CP006027.1|WP_000628922.1|5382899_5383493_+|TetR/AcrR-family-transcriptional-regulator
MITKKQYRVPGRPRRFAPEQAVSAAKVLFHQKGFDAVSVAEVTDYLGINPPSLYAAFGNKAGLFSRVLNEYVGTEAIPLADILRDDRPVGECLAEVLKEAARRYSQNGGCAGCMVLEGIHSHDPQARDIAVQYYHAAETAIYDYIARRHPQSAQCVTDFMSTVMSGLSAKAREGHSIEQLCATAALAGEAIKTILKE
>NZ_CP006027.1|WP_000500682.1|5382115_5382829_-|SDR-family-oxidoreductase
MGAFTGKTVLILGGSRGIGAAIVRRFVTDGANVRFTYAESKDAAERLAQETGATAVFTDSADRDAVIDVVRKSGALDILVVNAGIGVFGDALELNADDIDRLFKINIHAPYHASVEAARQMPEGGRILIIGSVNGDRMPVAGMAAYAASKSALQGMARGLARDFGPRGITINVVQPGPIDTDANPANGPMRDMLHSFMAIKRHGQPEEVAGMVAWLAGPEASFVTGAMHTIDGAFGA
>NZ_CP006027.1|WP_000397144.1|5393164_5394676_-|leucyl-aminopeptidase
MEFSVKSGSPEKQRSACIVVGVFEPRRLSPIAEQLDKISDGYISALLRRGELEGKPGQTLLLHHVPNVLSERILLIGCGKERELDERQYKQVIQKTINTLNDTGSMEAVCFLTELHVKGRNNYWKVRQAVETAKETLYSFDQLKTNKSEPRRPLRKMVFNVPTRRELTSGERAIQHGLAIAAGIKAAKDLGNMPPNICNAAYLASQARQLADSYSKNVITRVIGEQQMKELGMHSYLAVGQGSQNESLMSVIEYKGNASEDARPIVLVGKGLTFDSGGISIKPSEGMDEMKYDMCGAAAVYGVMRMVAELQLPINVIGVLAGCENMPGGRAYRPGDVLTTMSGQTVEVLNTDAEGRLVLCDVLTYVERFEPEAVIDVATLTGACVIALGHHITGLMANHNPLAHELIAASEQSGDRAWRLPLGDEYQEQLESNFADMANIGGRPGGAITAGCFLSRFTRKYNWAHLDIAGTAWRSGKAKGATGRPVALLAQFLLNRAGFNGEE
>NZ_CP006027.1|WP_000584114.1|5394942_5396043_+|LPS-export-ABC-transporter-permease-LptF
MIIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPANLVLSLLGLGVPEMAQLILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMILAVFTAIVAAVNVMWAGPWSSRHQDEVLAEAKANPGMAALAQGQFQQATNGSSVLFIESVDGSDFKDVFLAQIRPKGNARPSVVVADSGHLTQLRDGSQVVTLNQGTRFEGTALLRDFRITDFQDYQAIIGHQAVALDPNDTDQMDMRTLWNTDTDRARAELNWRITLVFTVFMMALMVVPLSVVNPRQGRVLSMLPAMLLYLLFFLIQTSLKSNGGKGKLDPTLWMWTVNLIYLALAIVLNLWDTVPVRRLRASFSRKGAV
>NZ_CP006027.1|WP_001295681.1|5396042_5397125_+|LPS-export-ABC-transporter-permease-LptG
MQPFGVLDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQGSYDALGAGMYTLLSVPKDVQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGEWVAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDEELGGISIYAFNENRRLQSVRYAATAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTNLTPDKLGVVALDPDALSISGLHNYVKYLKSSGQDAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLRSVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGALLPSASFFLISLWLLMRKS
>NZ_CP006027.1|WP_001400713.1|5397285_5398788_-|DUF853-domain-containing-protein
MSEPLLIARTPDTELFLLPGMANRHGLITGATGTGKTVTLQKLAESLSEIGVPVFMADVKGDLTGIAQAGTASEKLLTRLKNIGVNDWQPHANPVVVWDIFGEKGHPVRATVSDLGPLLLARLLNLNDVQSGVLNIIFRIADDQGLLLLDFKDLRAITQYIGDNAKSFQNQYGNISSASVGAIQRGLLSLEQQGAAHFFGEPMLDIKDWMRTDANGKGVINILSAEKLYQMPKLYAASLLWMISELYEQLPEAGDLEKPKLVFFFDEAHLLFNDAPQVLLDKIEQVIRLIRSKGVGVWFVSQNPSDIPDNVLGQLGNRVQHALRAFTPKDQKAVKAAAQTMRANPAFDTEKAIQELGTGEALISFLDAKGSPSVVERAMVIAPCSRMGPVTEDERNGLINHSPVYGKYEDDVDRESAYEMLQKGFQASTEQQNNPPAKGKEVAVDDGILGGLKDILFGTTGPRGGKKDGVVQTMAKSAARQVTNQIVRGMLGSLLGGRKR
>NZ_CP006027.1|WP_001400715.1|5398917_5399937_-|NADPH-dependent-aldehyde-reductase-Ahr
MSMIKSYAAKEAGGELEVYEYDPGELKPQDVEVQVDYCGICHSDLSMIDNEWGFSQYPLVAGHEVIGRVVALGSAAQDKGLQVGQRVGIGWTARSCGHCDACISGNQINCEQGAVPTIMNRGGFAEKLRADWQWVIPLPENIDIESAGPLLCGGITVFKPLLMHHITATSRVGVIGIGGLGHIAIKLLHAMGCEVTAFSSNPAKEQEVLAMGADKVVNSRDPQALKALAGQFDLIINTVNVSLDWQPYFEALTYGGNFHTIGAVLTPLPVPAFTLIAGDRSVSGSATGTPYELRKLMRFAARSKVVPTTELFPMSKINDAIQHVRDGKARYRVVLKADF
>NZ_CP006027.1|WP_000416999.1|5400906_5402943_+|hypothetical-protein
MEKVYDTTRISNLANDPKQFCSFFCEYIKRDDISIDIALDVLRISSIYYNRFSVQTEVEYNNTFKKCINELVNSFPDNIELISEFESQCKIMHDINNSFFAATKCAGIWRKNTKKSHALILNLIMFCEMFLSSLSSLVVVNDPKKMKRIFPLFIVSENINIHAEPDIEYFRVIDRAFDEVANYTGRIFSYLRTHEPLKLTSCVNKQTLLSMGGYLNEWNVFDSLSRVRDFFRLSSAVFTKLDNNIYSLEVDSFCLYRDYEIARNRLMMRASHLYSEVHEFSNKHFHLNSWVKDHMPSYLNSDGVFSSFHLSELENMSPDDLHEEYGNISLFNWVHAYQCLVELSKEEMSKRFSSTKPIPLQLDRWLIIKSRESWLSFFQRKGIAADAAKKLIDYFTFNSKSHDLNDCPFIPCMDGLCLMPALIANSSVTRSLMSLFGSKKISQASKGRFHEQQFIKQVRDAGIKASPIDAHANYQCDCVILLDDCLIFTELKSNGQPIYYGKYYQQVCNIVGDSSLIHDHNNKFMRSYFQQINRTSEHYLNHLDVIIKEFELPSTWQPKGVYKLIVTTTMLGGKYHVDDTYVADKYALSSFFQRIPGVIYQTNENGEMAKNIIDGFECCEGEITIDKFIDYLSSLPGINAVRKNIQKLTYSVRFNEKLVHHPYYDSWAFGPYIRKGND
>NZ_CP006027.1|WP_001153034.1|5403341_5403521_-|hypothetical-protein
MQDLAASLQLAFDSGAKRVLLPISSAMDIPTVPAELFTKFQVSFYSEPVDAVYKALDVN
>NZ_CP006027.1|WP_025404513.1|5403565_5404438_-|HNH-endonuclease
MASSKSLQQAIANIKIWHKDEQRAPHKPLLLLYVLAGYLNGHPRLFDYGSEIYEPLHSLLERFGPQRSQYRPDMPFWRLQGDGFWQLHNAERCSTAGSSRQPPVKELNEYHVAGGFDEQHYALVIGNKKLINTLAQQILEAHFTESIQEEIADELGFDLQQIRKQRDPLFRKNVLRAYNYQCAICGFNMRHDDTTVALEAAHIKWKQHGGPCEIPNGLALCAIHHKAFDKGSIGLDENMRVLVSDAVNGGGIVERLFWDFDGKTITLPQVRKNYPYEVFVEWHRKEVFRG
>NZ_CP006027.1|WP_122993992.1|5404424_5404733_-|N-acetylneuraminate-epimerase
MGMAGNVTFVHSGKAYVTGGVNQNIFNGYFEDLNEAGEYLAAIDKINAYYFDKKAEDYFFNKFLLSFDPSTQQWIFTCRLEQQKICEHDCNYFTAWDINGFQ
>NZ_CP006027.1|WP_000777278.1|5404977_5406081_-|HNH-endonuclease
MKLSIDLSELIQLGKKMLPEGVDFFLDESPIDFDPIDIELSTGKEVSIEDLDPGSGLISYHGRQVLLYIRDHSGRYDAAIVDGEKGKRFHIAWCRTLDEMRHKNRFERYHATNRIDGLFEIDDGSGRSQDVDLRVCMNCLERLNYKGSIDKQRKREIFKSFSLNEFFSDYSTCFRHMPKGIYDKTNSGYVENWKEISKEIREKANYVCNDCGVNLSTAKNLCHVHHKNGIKYDNHHENLLVLCKDCHRKQPLHEGIFVTQAEMAIIQRLRSQQGLLKAESWNEIYDLTDPSVHGDINMMQHKGFQPPVPGLDLQNSEHEIIATVEAAWPGLKIAVNLTPAEVEGWRIYTVGELVKEIQTGAFTPATL

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP006027_4	4.1\|3498262\|32\|NZ_CP006027\|CRISPRCasFinder,CRT	3498262-3498293	32	LC542972	Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence	246937-246968	3	0.906
NZ_CP006027_5	5.1\|3524142\|31\|NZ_CP006027\|CRISPRCasFinder,CRT	3524142-3524172	31	NZ_CP024469	Shigella dysenteriae strain BU53M1 plasmid unnamed3, complete sequence	158925-158955	3	0.903
NZ_CP006027_5	5.1\|3524142\|31\|NZ_CP006027\|CRISPRCasFinder,CRT	3524142-3524172	31	NZ_CP026787	Shigella dysenteriae strain NCTC 9718 plasmid unnamed	74518-74548	3	0.903
NZ_CP006027_5	5.1\|3524142\|31\|NZ_CP006027\|CRISPRCasFinder,CRT	3524142-3524172	31	NC_007607	Shigella dysenteriae Sd197 plasmid pSD1_197, complete sequence	94031-94061	3	0.903
NZ_CP006027_5	5.1\|3524142\|31\|NZ_CP006027\|CRISPRCasFinder,CRT	3524142-3524172	31	NC_022899	Shigella dysenteriae 1617 plasmid pSLG231, complete sequence	91344-91374	3	0.903
NZ_CP006027_5	5.1\|3524142\|31\|NZ_CP006027\|CRISPRCasFinder,CRT	3524142-3524172	31	NZ_CP017721	Salmonella enterica subsp. enterica serovar Minnesota strain CFSAN017963 plasmid pCFSAN017963_01, complete sequence	167541-167571	3	0.903
NZ_CP006027_5	5.1\|3524142\|31\|NZ_CP006027\|CRISPRCasFinder,CRT	3524142-3524172	31	NZ_CP026779	Shigella dysenteriae strain 69-3818 plasmid unnamed2, complete sequence	179378-179408	3	0.903
NZ_CP006027_5	5.1\|3524142\|31\|NZ_CP006027\|CRISPRCasFinder,CRT	3524142-3524172	31	CP027674	Escherichia coli strain 2014C-3003 plasmid unnamed2, complete sequence	102932-102962	3	0.903
NZ_CP006027_5	5.1\|3524142\|31\|NZ_CP006027\|CRISPRCasFinder,CRT	3524142-3524172	31	NZ_MF156695	Klebsiella pneumoniae strain 1642 plasmid p1642-1, complete sequence	72327-72357	3	0.903
NZ_CP006027_5	5.1\|3524142\|31\|NZ_CP006027\|CRISPRCasFinder,CRT	3524142-3524172	31	NZ_CP026783	Shigella dysenteriae strain 08-3380 plasmid unnamed, complete sequence	35573-35603	3	0.903
NZ_CP006027_5	5.1\|3524142\|31\|NZ_CP006027\|CRISPRCasFinder,CRT	3524142-3524172	31	NZ_CP026775	Shigella dysenteriae strain ATCC 13313 plasmid unnamed, complete sequence	132210-132240	3	0.903
NZ_CP006027_5	5.1\|3524142\|31\|NZ_CP006027\|CRISPRCasFinder,CRT	3524142-3524172	31	NZ_CP026781	Shigella dysenteriae strain 53-3937 plasmid unnamed	50371-50401	3	0.903
NZ_CP006027_5	5.1\|3524142\|31\|NZ_CP006027\|CRISPRCasFinder,CRT	3524142-3524172	31	NZ_CP026879	Shigella dysenteriae strain 07-3308 plasmid unnamed, complete sequence	63271-63301	3	0.903
NZ_CP006027_5	5.1\|3524142\|31\|NZ_CP006027\|CRISPRCasFinder,CRT	3524142-3524172	31	NZ_CP026785	Shigella dysenteriae strain 80-547 plasmid unnamed	47954-47984	3	0.903
NZ_CP006027_1	1.1\|2904235\|44\|NZ_CP006027\|CRISPRCasFinder	2904235-2904278	44	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	194003-194046	7	0.841
NZ_CP006027_1	1.1\|2904235\|44\|NZ_CP006027\|CRISPRCasFinder	2904235-2904278	44	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	194096-194139	7	0.841
NZ_CP006027_1	1.1\|2904235\|44\|NZ_CP006027\|CRISPRCasFinder	2904235-2904278	44	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	194282-194325	7	0.841
NZ_CP006027_1	1.1\|2904235\|44\|NZ_CP006027\|CRISPRCasFinder	2904235-2904278	44	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	229083-229126	7	0.841
NZ_CP006027_1	1.1\|2904235\|44\|NZ_CP006027\|CRISPRCasFinder	2904235-2904278	44	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	229184-229227	7	0.841
NZ_CP006027_1	1.1\|2904235\|44\|NZ_CP006027\|CRISPRCasFinder	2904235-2904278	44	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	229285-229328	7	0.841
NZ_CP006027_1	1.1\|2904235\|44\|NZ_CP006027\|CRISPRCasFinder	2904235-2904278	44	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	204497-204540	7	0.841
NZ_CP006027_1	1.1\|2904235\|44\|NZ_CP006027\|CRISPRCasFinder	2904235-2904278	44	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	204590-204633	7	0.841
NZ_CP006027_1	1.1\|2904235\|44\|NZ_CP006027\|CRISPRCasFinder	2904235-2904278	44	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	204776-204819	7	0.841
NZ_CP006027_1	1.1\|2904235\|44\|NZ_CP006027\|CRISPRCasFinder	2904235-2904278	44	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	239577-239620	7	0.841
NZ_CP006027_1	1.1\|2904235\|44\|NZ_CP006027\|CRISPRCasFinder	2904235-2904278	44	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	239678-239721	7	0.841
NZ_CP006027_1	1.1\|2904235\|44\|NZ_CP006027\|CRISPRCasFinder	2904235-2904278	44	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	239779-239822	7	0.841
NZ_CP006027_1	1.1\|2904235\|44\|NZ_CP006027\|CRISPRCasFinder	2904235-2904278	44	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	195331-195374	7	0.841
NZ_CP006027_1	1.1\|2904235\|44\|NZ_CP006027\|CRISPRCasFinder	2904235-2904278	44	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	195424-195467	7	0.841
NZ_CP006027_1	1.1\|2904235\|44\|NZ_CP006027\|CRISPRCasFinder	2904235-2904278	44	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	195610-195653	7	0.841
NZ_CP006027_1	1.1\|2904235\|44\|NZ_CP006027\|CRISPRCasFinder	2904235-2904278	44	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	230489-230532	7	0.841
NZ_CP006027_1	1.1\|2904235\|44\|NZ_CP006027\|CRISPRCasFinder	2904235-2904278	44	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	230590-230633	7	0.841
NZ_CP006027_1	1.1\|2904235\|44\|NZ_CP006027\|CRISPRCasFinder	2904235-2904278	44	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	230691-230734	7	0.841
NZ_CP006027_1	1.1\|2904235\|44\|NZ_CP006027\|CRISPRCasFinder	2904235-2904278	44	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	176286-176329	7	0.841
NZ_CP006027_1	1.1\|2904235\|44\|NZ_CP006027\|CRISPRCasFinder	2904235-2904278	44	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	176379-176422	7	0.841
NZ_CP006027_1	1.1\|2904235\|44\|NZ_CP006027\|CRISPRCasFinder	2904235-2904278	44	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	176565-176608	7	0.841
NZ_CP006027_1	1.1\|2904235\|44\|NZ_CP006027\|CRISPRCasFinder	2904235-2904278	44	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	211459-211502	7	0.841
NZ_CP006027_1	1.1\|2904235\|44\|NZ_CP006027\|CRISPRCasFinder	2904235-2904278	44	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	211560-211603	7	0.841
NZ_CP006027_1	1.1\|2904235\|44\|NZ_CP006027\|CRISPRCasFinder	2904235-2904278	44	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	211661-211704	7	0.841
NZ_CP006027_1	1.1\|2904235\|44\|NZ_CP006027\|CRISPRCasFinder	2904235-2904278	44	NZ_CP048307	Escherichia coli strain 9 plasmid p009_C, complete sequence	14201-14244	7	0.841
NZ_CP006027_1	1.1\|2904235\|44\|NZ_CP006027\|CRISPRCasFinder	2904235-2904278	44	NZ_CP048307	Escherichia coli strain 9 plasmid p009_C, complete sequence	51839-51882	7	0.841
NZ_CP006027_1	1.1\|2904235\|44\|NZ_CP006027\|CRISPRCasFinder	2904235-2904278	44	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	386513-386556	7	0.841
NZ_CP006027_4	4.1\|3498262\|32\|NZ_CP006027\|CRISPRCasFinder,CRT	3498262-3498293	32	NZ_CP015038	Burkholderia cenocepacia strain 895 plasmid pBcp895-1, complete sequence	112768-112799	7	0.781
NZ_CP006027_1	1.1\|2904235\|44\|NZ_CP006027\|CRISPRCasFinder	2904235-2904278	44	NZ_AP023208	Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence	6864-6907	8	0.818
NZ_CP006027_1	1.1\|2904235\|44\|NZ_CP006027\|CRISPRCasFinder	2904235-2904278	44	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	194189-194232	8	0.818
NZ_CP006027_1	1.1\|2904235\|44\|NZ_CP006027\|CRISPRCasFinder	2904235-2904278	44	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	229386-229429	8	0.818
NZ_CP006027_1	1.1\|2904235\|44\|NZ_CP006027\|CRISPRCasFinder	2904235-2904278	44	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	204683-204726	8	0.818
NZ_CP006027_1	1.1\|2904235\|44\|NZ_CP006027\|CRISPRCasFinder	2904235-2904278	44	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	239880-239923	8	0.818
NZ_CP006027_1	1.1\|2904235\|44\|NZ_CP006027\|CRISPRCasFinder	2904235-2904278	44	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	195517-195560	8	0.818
NZ_CP006027_1	1.1\|2904235\|44\|NZ_CP006027\|CRISPRCasFinder	2904235-2904278	44	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	230792-230835	8	0.818
NZ_CP006027_1	1.1\|2904235\|44\|NZ_CP006027\|CRISPRCasFinder	2904235-2904278	44	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	176472-176515	8	0.818
NZ_CP006027_1	1.1\|2904235\|44\|NZ_CP006027\|CRISPRCasFinder	2904235-2904278	44	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	211762-211805	8	0.818
NZ_CP006027_1	1.1\|2904235\|44\|NZ_CP006027\|CRISPRCasFinder	2904235-2904278	44	NZ_CP044147	Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2	7447-7490	8	0.818
NZ_CP006027_1	1.1\|2904235\|44\|NZ_CP006027\|CRISPRCasFinder	2904235-2904278	44	CP044351	Escherichia coli strain 194195 plasmid p194195_1, complete sequence	84271-84314	8	0.818
NZ_CP006027_1	1.1\|2904235\|44\|NZ_CP006027\|CRISPRCasFinder	2904235-2904278	44	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	11516-11559	8	0.818
NZ_CP006027_1	1.1\|2904235\|44\|NZ_CP006027\|CRISPRCasFinder	2904235-2904278	44	NZ_AP023207	Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence	27999-28042	8	0.818
NZ_CP006027_1	1.1\|2904235\|44\|NZ_CP006027\|CRISPRCasFinder	2904235-2904278	44	MG065691	UNVERIFIED: Campylobacter phage A11a, complete genome	63894-63937	8	0.818
NZ_CP006027_1	1.1\|2904235\|44\|NZ_CP006027\|CRISPRCasFinder	2904235-2904278	44	MF374379	Escherichia phage DN1, complete genome	31163-31206	8	0.818
NZ_CP006027_1	1.1\|2904235\|44\|NZ_CP006027\|CRISPRCasFinder	2904235-2904278	44	MG065686	UNVERIFIED: Campylobacter phage A18a, complete genome	110186-110229	8	0.818
NZ_CP006027_1	1.1\|2904235\|44\|NZ_CP006027\|CRISPRCasFinder	2904235-2904278	44	MT230112	Escherichia coli strain DH5alpha plasmid pESBL112, complete sequence	99-142	8	0.818
NZ_CP006027_4	4.1\|3498262\|32\|NZ_CP006027\|CRISPRCasFinder,CRT	3498262-3498293	32	NZ_AP014705	Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence	1428097-1428128	8	0.75
NZ_CP006027_5	5.3\|3524264\|30\|NZ_CP006027\|CRISPRCasFinder,CRT	3524264-3524293	30	LC528882	Burkholderia phage FLC5 DNA, complete genome	8002-8031	8	0.733
NZ_CP006027_5	5.3\|3524264\|30\|NZ_CP006027\|CRISPRCasFinder,CRT	3524264-3524293	30	HM461982	Burkholderia phage KS14, complete genome	5145-5174	8	0.733
NZ_CP006027_1	1.1\|2904235\|44\|NZ_CP006027\|CRISPRCasFinder	2904235-2904278	44	NZ_AP023208	Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence	12164-12207	9	0.795
NZ_CP006027_1	1.1\|2904235\|44\|NZ_CP006027\|CRISPRCasFinder	2904235-2904278	44	NZ_AP023208	Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence	17899-17942	9	0.795
NZ_CP006027_1	1.1\|2904235\|44\|NZ_CP006027\|CRISPRCasFinder	2904235-2904278	44	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	211730-211773	9	0.795
NZ_CP006027_1	1.1\|2904235\|44\|NZ_CP006027\|CRISPRCasFinder	2904235-2904278	44	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	211930-211973	9	0.795
NZ_CP006027_1	1.1\|2904235\|44\|NZ_CP006027\|CRISPRCasFinder	2904235-2904278	44	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	222224-222267	9	0.795
NZ_CP006027_1	1.1\|2904235\|44\|NZ_CP006027\|CRISPRCasFinder	2904235-2904278	44	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	222424-222467	9	0.795
NZ_CP006027_1	1.1\|2904235\|44\|NZ_CP006027\|CRISPRCasFinder	2904235-2904278	44	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	213058-213101	9	0.795
NZ_CP006027_1	1.1\|2904235\|44\|NZ_CP006027\|CRISPRCasFinder	2904235-2904278	44	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	213258-213301	9	0.795
NZ_CP006027_1	1.1\|2904235\|44\|NZ_CP006027\|CRISPRCasFinder	2904235-2904278	44	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	194013-194056	9	0.795
NZ_CP006027_1	1.1\|2904235\|44\|NZ_CP006027\|CRISPRCasFinder	2904235-2904278	44	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	194213-194256	9	0.795
NZ_CP006027_1	1.1\|2904235\|44\|NZ_CP006027\|CRISPRCasFinder	2904235-2904278	44	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	82847-82890	9	0.795
NZ_CP006027_1	1.1\|2904235\|44\|NZ_CP006027\|CRISPRCasFinder	2904235-2904278	44	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	102549-102592	9	0.795
NZ_CP006027_1	1.1\|2904235\|44\|NZ_CP006027\|CRISPRCasFinder	2904235-2904278	44	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	40381-40424	9	0.795
NZ_CP006027_1	1.1\|2904235\|44\|NZ_CP006027\|CRISPRCasFinder	2904235-2904278	44	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	313597-313640	9	0.795
NZ_CP006027_1	1.1\|2904235\|44\|NZ_CP006027\|CRISPRCasFinder	2904235-2904278	44	MG065691	UNVERIFIED: Campylobacter phage A11a, complete genome	33059-33102	9	0.795
NZ_CP006027_1	1.1\|2904235\|44\|NZ_CP006027\|CRISPRCasFinder	2904235-2904278	44	NZ_CP010208	Escherichia coli strain M11 plasmid B, complete sequence	27282-27325	9	0.795
NZ_CP006027_1	1.1\|2904235\|44\|NZ_CP006027\|CRISPRCasFinder	2904235-2904278	44	NZ_CP010208	Escherichia coli strain M11 plasmid B, complete sequence	27381-27424	9	0.795
NZ_CP006027_1	1.1\|2904235\|44\|NZ_CP006027\|CRISPRCasFinder	2904235-2904278	44	MG065686	UNVERIFIED: Campylobacter phage A18a, complete genome	141021-141064	9	0.795
NZ_CP006027_1	1.1\|2904235\|44\|NZ_CP006027\|CRISPRCasFinder	2904235-2904278	44	NZ_AP023209	Escherichia coli strain TUM18781 plasmid pMTY18781-4, complete sequence	19394-19437	9	0.795
NZ_CP006027_1	1.1\|2904235\|44\|NZ_CP006027\|CRISPRCasFinder	2904235-2904278	44	NC_049343	Escherichia phage 500465-2, complete genome	31797-31840	9	0.795
NZ_CP006027_1	1.1\|2904235\|44\|NZ_CP006027\|CRISPRCasFinder	2904235-2904278	44	NZ_CP044308	Escherichia coli strain C27A plasmid pC27A-3, complete sequence	56036-56079	9	0.795
NZ_CP006027_1	1.1\|2904235\|44\|NZ_CP006027\|CRISPRCasFinder	2904235-2904278	44	NZ_CP053721	Escherichia coli strain CP131_Sichuan plasmid pCP131-IncHI1, complete sequence	198909-198952	9	0.795
NZ_CP006027_1	1.1\|2904235\|44\|NZ_CP006027\|CRISPRCasFinder	2904235-2904278	44	NZ_CP019246	Escherichia coli strain Combat13F7 plasmid pCombat13F7-1, complete sequence	40305-40348	9	0.795
NZ_CP006027_1	1.1\|2904235\|44\|NZ_CP006027\|CRISPRCasFinder	2904235-2904278	44	NZ_CP044299	Escherichia coli strain P59A plasmid pP59A-CTX-M-55, complete sequence	91418-91461	9	0.795
NZ_CP006027_1	1.1\|2904235\|44\|NZ_CP006027\|CRISPRCasFinder	2904235-2904278	44	MT230312	Escherichia coli strain DH5alpha plasmid pESBL31, complete sequence	103-146	9	0.795
NZ_CP006027_4	4.1\|3498262\|32\|NZ_CP006027\|CRISPRCasFinder,CRT	3498262-3498293	32	NZ_CP017563	Paraburkholderia sprentiae WSM5005 plasmid pl1WSM5005, complete sequence	141278-141309	9	0.719
NZ_CP006027_4	4.4\|3498445\|32\|NZ_CP006027\|CRISPRCasFinder,CRT,PILER-CR	3498445-3498476	32	NZ_CP046258	Gordonia sp. 135 plasmid pG135, complete sequence	139380-139411	9	0.719
NZ_CP006027_5	5.2\|3524203\|31\|NZ_CP006027\|CRISPRCasFinder,CRT	3524203-3524233	31	NZ_CP036488	Rahnella aquatilis strain MEM40 plasmid pMEM40-1, complete sequence	265470-265500	9	0.71
NZ_CP006027_5	5.2\|3524203\|31\|NZ_CP006027\|CRISPRCasFinder,CRT	3524203-3524233	31	NC_017060	Rahnella aquatilis HX2 plasmid PRA1, complete sequence	337888-337918	9	0.71
NZ_CP006027_5	5.2\|3524203\|31\|NZ_CP006027\|CRISPRCasFinder,CRT	3524203-3524233	31	NC_015062	Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequence	340710-340740	9	0.71
NZ_CP006027_5	5.2\|3524203\|31\|NZ_CP006027\|CRISPRCasFinder,CRT	3524203-3524233	31	NZ_CP034838	Rahnella aquatilis strain KM12 plasmid pKM12v1, complete sequence	327465-327495	9	0.71
NZ_CP006027_5	5.2\|3524203\|31\|NZ_CP006027\|CRISPRCasFinder,CRT	3524203-3524233	31	NZ_CP034839	Rahnella aquatilis strain KM25 plasmid pKM12v2, complete sequence	327465-327495	9	0.71
NZ_CP006027_5	5.2\|3524203\|31\|NZ_CP006027\|CRISPRCasFinder,CRT	3524203-3524233	31	NZ_CP034837	Rahnella aquatilis strain KM05 plasmid pKM05, complete sequence	293141-293171	9	0.71
NZ_CP006027_5	5.2\|3524203\|31\|NZ_CP006027\|CRISPRCasFinder,CRT	3524203-3524233	31	NZ_CP032297	Rahnella aquatilis strain ZF7 plasmid pRAZF7, complete sequence	301810-301840	9	0.71
NZ_CP006027_5	5.3\|3524264\|30\|NZ_CP006027\|CRISPRCasFinder,CRT	3524264-3524293	30	NC_014390	Butyrivibrio proteoclasticus B316 plasmid pCY186, complete sequence	116507-116536	9	0.7
NZ_CP006027_1	1.1\|2904235\|44\|NZ_CP006027\|CRISPRCasFinder	2904235-2904278	44	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	4170-4213	10	0.773
NZ_CP006027_1	1.1\|2904235\|44\|NZ_CP006027\|CRISPRCasFinder	2904235-2904278	44	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	4169-4212	10	0.773
NZ_CP006027_1	1.1\|2904235\|44\|NZ_CP006027\|CRISPRCasFinder	2904235-2904278	44	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	4169-4212	10	0.773
NZ_CP006027_1	1.1\|2904235\|44\|NZ_CP006027\|CRISPRCasFinder	2904235-2904278	44	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	4169-4212	10	0.773
NZ_CP006027_1	1.1\|2904235\|44\|NZ_CP006027\|CRISPRCasFinder	2904235-2904278	44	NZ_CP048307	Escherichia coli strain 9 plasmid p009_C, complete sequence	14110-14153	10	0.773
NZ_CP006027_1	1.1\|2904235\|44\|NZ_CP006027\|CRISPRCasFinder	2904235-2904278	44	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	27032-27075	10	0.773
NZ_CP006027_1	1.1\|2904235\|44\|NZ_CP006027\|CRISPRCasFinder	2904235-2904278	44	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	397088-397131	10	0.773
NZ_CP006027_1	1.1\|2904235\|44\|NZ_CP006027\|CRISPRCasFinder	2904235-2904278	44	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	404133-404176	10	0.773
NZ_CP006027_1	1.1\|2904235\|44\|NZ_CP006027\|CRISPRCasFinder	2904235-2904278	44	NZ_AP023207	Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence	31304-31347	10	0.773
NZ_CP006027_1	1.1\|2904235\|44\|NZ_CP006027\|CRISPRCasFinder	2904235-2904278	44	NZ_CP010208	Escherichia coli strain M11 plasmid B, complete sequence	27480-27523	10	0.773
NZ_CP006027_1	1.1\|2904235\|44\|NZ_CP006027\|CRISPRCasFinder	2904235-2904278	44	NZ_CP044308	Escherichia coli strain C27A plasmid pC27A-3, complete sequence	115810-115853	10	0.773
NZ_CP006027_2	2.1\|2985558\|56\|NZ_CP006027\|CRISPRCasFinder	2985558-2985613	56	NZ_AP023208	Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence	12112-12167	13	0.768
NZ_CP006027_1	1.1\|2904235\|44\|NZ_CP006027\|CRISPRCasFinder	2904235-2904278	44	NZ_CP019906	Escherichia coli strain MDR_56 plasmid unnamed5, complete sequence	17871-17914	14	0.682
NZ_CP006027_2	2.1\|2985558\|56\|NZ_CP006027\|CRISPRCasFinder	2985558-2985613	56	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	87116-87171	17	0.696

1. spacer 4.1|3498262|32|NZ_CP006027|CRISPRCasFinder,CRT matches to LC542972 (Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence) position: , mismatch: 3, identity: 0.906

taagtgatatccatcatcgcatccagtgcgcc	CRISPR spacer
caagtgatgtccatcatcgcatccagtgcgtc	Protospacer
.*******.*********************.*

2. spacer 5.1|3524142|31|NZ_CP006027|CRISPRCasFinder,CRT matches to NZ_CP024469 (Shigella dysenteriae strain BU53M1 plasmid unnamed3, complete sequence) position: , mismatch: 3, identity: 0.903

gagccctgccagaatggggcctcttttgtac	CRISPR spacer
gaaccctgccagaacggggcctcttttgttc	Protospacer
**.***********.************** *

3. spacer 5.1|3524142|31|NZ_CP006027|CRISPRCasFinder,CRT matches to NZ_CP026787 (Shigella dysenteriae strain NCTC 9718 plasmid unnamed) position: , mismatch: 3, identity: 0.903

gagccctgccagaatggggcctcttttgtac	CRISPR spacer
gaaccctgccagaacggggcctcttttgttc	Protospacer
**.***********.************** *

4. spacer 5.1|3524142|31|NZ_CP006027|CRISPRCasFinder,CRT matches to NC_007607 (Shigella dysenteriae Sd197 plasmid pSD1_197, complete sequence) position: , mismatch: 3, identity: 0.903

gagccctgccagaatggggcctcttttgtac	CRISPR spacer
gaaccctgccagaacggggcctcttttgttc	Protospacer
**.***********.************** *

5. spacer 5.1|3524142|31|NZ_CP006027|CRISPRCasFinder,CRT matches to NC_022899 (Shigella dysenteriae 1617 plasmid pSLG231, complete sequence) position: , mismatch: 3, identity: 0.903

gagccctgccagaatggggcctcttttgtac	CRISPR spacer
gaaccctgccagaacggggcctcttttgttc	Protospacer
**.***********.************** *

6. spacer 5.1|3524142|31|NZ_CP006027|CRISPRCasFinder,CRT matches to NZ_CP017721 (Salmonella enterica subsp. enterica serovar Minnesota strain CFSAN017963 plasmid pCFSAN017963_01, complete sequence) position: , mismatch: 3, identity: 0.903

gagccctgccagaatggggcctcttttgtac	CRISPR spacer
gagccctgccagaaggggtcctcttttgtgc	Protospacer
************** *** **********.*

7. spacer 5.1|3524142|31|NZ_CP006027|CRISPRCasFinder,CRT matches to NZ_CP026779 (Shigella dysenteriae strain 69-3818 plasmid unnamed2, complete sequence) position: , mismatch: 3, identity: 0.903

gagccctgccagaatggggcctcttttgtac	CRISPR spacer
gaaccctgccagaacggggcctcttttgttc	Protospacer
**.***********.************** *

8. spacer 5.1|3524142|31|NZ_CP006027|CRISPRCasFinder,CRT matches to CP027674 (Escherichia coli strain 2014C-3003 plasmid unnamed2, complete sequence) position: , mismatch: 3, identity: 0.903

gagccctgccagaatggggcctcttttgtac	CRISPR spacer
gagccctgccagaacgggtcctcttttgtgc	Protospacer
**************.*** **********.*

9. spacer 5.1|3524142|31|NZ_CP006027|CRISPRCasFinder,CRT matches to NZ_MF156695 (Klebsiella pneumoniae strain 1642 plasmid p1642-1, complete sequence) position: , mismatch: 3, identity: 0.903

gagccctgccagaatggggcctcttttgtac	CRISPR spacer
gagccctgccagaacgggtcctcttttgtgc	Protospacer
**************.*** **********.*

10. spacer 5.1|3524142|31|NZ_CP006027|CRISPRCasFinder,CRT matches to NZ_CP026783 (Shigella dysenteriae strain 08-3380 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.903

gagccctgccagaatggggcctcttttgtac	CRISPR spacer
gaaccctgccagaacggggcctcttttgttc	Protospacer
**.***********.************** *

11. spacer 5.1|3524142|31|NZ_CP006027|CRISPRCasFinder,CRT matches to NZ_CP026775 (Shigella dysenteriae strain ATCC 13313 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.903

gagccctgccagaatggggcctcttttgtac	CRISPR spacer
gaaccctgccagaacggggcctcttttgttc	Protospacer
**.***********.************** *

12. spacer 5.1|3524142|31|NZ_CP006027|CRISPRCasFinder,CRT matches to NZ_CP026781 (Shigella dysenteriae strain 53-3937 plasmid unnamed) position: , mismatch: 3, identity: 0.903

gagccctgccagaatggggcctcttttgtac	CRISPR spacer
gaaccctgccagaacggggcctcttttgttc	Protospacer
**.***********.************** *

13. spacer 5.1|3524142|31|NZ_CP006027|CRISPRCasFinder,CRT matches to NZ_CP026879 (Shigella dysenteriae strain 07-3308 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.903

gagccctgccagaatggggcctcttttgtac	CRISPR spacer
gaaccctgccagaacggggcctcttttgttc	Protospacer
**.***********.************** *

14. spacer 5.1|3524142|31|NZ_CP006027|CRISPRCasFinder,CRT matches to NZ_CP026785 (Shigella dysenteriae strain 80-547 plasmid unnamed) position: , mismatch: 3, identity: 0.903

gagccctgccagaatggggcctcttttgtac	CRISPR spacer
gaaccctgccagaacggggcctcttttgttc	Protospacer
**.***********.************** *

15. spacer 1.1|2904235|44|NZ_CP006027|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 7, identity: 0.841

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
tgttcatgccggatgcggcgtgaacgccttatccggcctacgaa	Protospacer
* .  .**********.**************************

16. spacer 1.1|2904235|44|NZ_CP006027|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 7, identity: 0.841

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgaa	Protospacer
. * . **********.**************************

17. spacer 1.1|2904235|44|NZ_CP006027|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 7, identity: 0.841

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgag	Protospacer
. * . **********.**************************

18. spacer 1.1|2904235|44|NZ_CP006027|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 7, identity: 0.841

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacgga	Protospacer
. **. **********.*************************.

19. spacer 1.1|2904235|44|NZ_CP006027|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 7, identity: 0.841

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacgga	Protospacer
. **. **********.*************************.

20. spacer 1.1|2904235|44|NZ_CP006027|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 7, identity: 0.841

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggg	Protospacer
. **. **********.*************************.

21. spacer 1.1|2904235|44|NZ_CP006027|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 7, identity: 0.841

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
tgttcatgccggatgcggcgtgaacgccttatccggcctacgaa	Protospacer
* .  .**********.**************************

22. spacer 1.1|2904235|44|NZ_CP006027|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 7, identity: 0.841

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgaa	Protospacer
. * . **********.**************************

23. spacer 1.1|2904235|44|NZ_CP006027|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 7, identity: 0.841

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgag	Protospacer
. * . **********.**************************

24. spacer 1.1|2904235|44|NZ_CP006027|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 7, identity: 0.841

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacgga	Protospacer
. **. **********.*************************.

25. spacer 1.1|2904235|44|NZ_CP006027|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 7, identity: 0.841

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacgga	Protospacer
. **. **********.*************************.

26. spacer 1.1|2904235|44|NZ_CP006027|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 7, identity: 0.841

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggg	Protospacer
. **. **********.*************************.

27. spacer 1.1|2904235|44|NZ_CP006027|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 7, identity: 0.841

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
tgttcatgccggatgcggcgtgaacgccttatccggcctacgaa	Protospacer
* .  .**********.**************************

28. spacer 1.1|2904235|44|NZ_CP006027|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 7, identity: 0.841

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgaa	Protospacer
. * . **********.**************************

29. spacer 1.1|2904235|44|NZ_CP006027|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 7, identity: 0.841

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgag	Protospacer
. * . **********.**************************

30. spacer 1.1|2904235|44|NZ_CP006027|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 7, identity: 0.841

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacgga	Protospacer
. **. **********.*************************.

31. spacer 1.1|2904235|44|NZ_CP006027|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 7, identity: 0.841

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacgga	Protospacer
. **. **********.*************************.

32. spacer 1.1|2904235|44|NZ_CP006027|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 7, identity: 0.841

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggg	Protospacer
. **. **********.*************************.

33. spacer 1.1|2904235|44|NZ_CP006027|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 7, identity: 0.841

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
tgttcatgccggatgcggcgtgaacgccttatccggcctacgaa	Protospacer
* .  .**********.**************************

34. spacer 1.1|2904235|44|NZ_CP006027|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 7, identity: 0.841

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgaa	Protospacer
. * . **********.**************************

35. spacer 1.1|2904235|44|NZ_CP006027|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 7, identity: 0.841

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgag	Protospacer
. * . **********.**************************

36. spacer 1.1|2904235|44|NZ_CP006027|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 7, identity: 0.841

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacgga	Protospacer
. **. **********.*************************.

37. spacer 1.1|2904235|44|NZ_CP006027|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 7, identity: 0.841

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacgga	Protospacer
. **. **********.*************************.

38. spacer 1.1|2904235|44|NZ_CP006027|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 7, identity: 0.841

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggg	Protospacer
. **. **********.*************************.

39. spacer 1.1|2904235|44|NZ_CP006027|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 7, identity: 0.841

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
gctggttgccggatgcggcgtgaacgccttatccggcctacatt	Protospacer
 *.** **********.************************. .

40. spacer 1.1|2904235|44|NZ_CP006027|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 7, identity: 0.841

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
agctggtgccggatgcggcgtaaacgccttatccggcctacaaa	Protospacer
  * ************.****.*******************.*

41. spacer 1.1|2904235|44|NZ_CP006027|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 7, identity: 0.841

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
cacaagtgccggatgcggcgtaaacgccttatccggcctacgcc	Protospacer
. *..***********.****.******************** *

42. spacer 4.1|3498262|32|NZ_CP006027|CRISPRCasFinder,CRT matches to NZ_CP015038 (Burkholderia cenocepacia strain 895 plasmid pBcp895-1, complete sequence) position: , mismatch: 7, identity: 0.781

taagtgat-atccatcatcgcatccagtgcgcc	CRISPR spacer
-ggttgatcgtccttcatcgcagccagtgcgcc	Protospacer
 .. **** .*** ******** **********

43. spacer 1.1|2904235|44|NZ_CP006027|CRISPRCasFinder matches to NZ_AP023208 (Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence) position: , mismatch: 8, identity: 0.818

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
ttgttttgccggatgcggcgtgaacgccttatccggcctacaaa	Protospacer
*.    **********.************************.*

44. spacer 1.1|2904235|44|NZ_CP006027|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 8, identity: 0.818

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
caccactgccggatgcggcgtggacgccttatccggcctacgag	Protospacer
. * . **********.*****.********************

45. spacer 1.1|2904235|44|NZ_CP006027|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 8, identity: 0.818

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
cacgactgccggatgcggcgtaaacgccttatccggcctacgga	Protospacer
. **. **********.****.********************.

46. spacer 1.1|2904235|44|NZ_CP006027|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 8, identity: 0.818

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
caccactgccggatgcggcgtggacgccttatccggcctacgag	Protospacer
. * . **********.*****.********************

47. spacer 1.1|2904235|44|NZ_CP006027|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 8, identity: 0.818

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
cacgactgccggatgcggcgtaaacgccttatccggcctacgga	Protospacer
. **. **********.****.********************.

48. spacer 1.1|2904235|44|NZ_CP006027|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 8, identity: 0.818

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
caccactgccggatgcggcgtggacgccttatccggcctacgag	Protospacer
. * . **********.*****.********************

49. spacer 1.1|2904235|44|NZ_CP006027|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 8, identity: 0.818

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
cacgactgccggatgcggcgtaaacgccttatccggcctacgga	Protospacer
. **. **********.****.********************.

50. spacer 1.1|2904235|44|NZ_CP006027|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 8, identity: 0.818

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
caccactgccggatgcggcgtggacgccttatccggcctacgag	Protospacer
. * . **********.*****.********************

51. spacer 1.1|2904235|44|NZ_CP006027|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 8, identity: 0.818

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
cacgactgccggatgcggcgtaaacgccttatccggcctacgga	Protospacer
. **. **********.****.********************.

52. spacer 1.1|2904235|44|NZ_CP006027|CRISPRCasFinder matches to NZ_CP044147 (Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2) position: , mismatch: 8, identity: 0.818

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
cacaattgccggatgcggcgtgaacgccttatccggcctacggt	Protospacer
. *.. **********.*************************..

53. spacer 1.1|2904235|44|NZ_CP006027|CRISPRCasFinder matches to CP044351 (Escherichia coli strain 194195 plasmid p194195_1, complete sequence) position: , mismatch: 8, identity: 0.818

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
cacaattgccggatgcggcgtgaacgccttatccggcctacggt	Protospacer
. *.. **********.*************************..

54. spacer 1.1|2904235|44|NZ_CP006027|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 8, identity: 0.818

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
aatttttgccggatgcggcgtgaacgccttatccggcctacaac	Protospacer
  .   **********.************************.**

55. spacer 1.1|2904235|44|NZ_CP006027|CRISPRCasFinder matches to NZ_AP023207 (Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence) position: , mismatch: 8, identity: 0.818

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
ctcaaatgccggatgcggcgtgaacgccttatccggcctacgca	Protospacer
..*...**********.*************************

56. spacer 1.1|2904235|44|NZ_CP006027|CRISPRCasFinder matches to MG065691 (UNVERIFIED: Campylobacter phage A11a, complete genome) position: , mismatch: 8, identity: 0.818

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
gcttcttgccggatgcggcgtgaacgccttatccggcctacaaa	Protospacer
 *.   **********.************************.*

57. spacer 1.1|2904235|44|NZ_CP006027|CRISPRCasFinder matches to MF374379 (Escherichia phage DN1, complete genome) position: , mismatch: 8, identity: 0.818

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
tgtttatgccggatgcggcgtgaacgccttatccggcctacaaa	Protospacer
* .  .**********.************************.*

58. spacer 1.1|2904235|44|NZ_CP006027|CRISPRCasFinder matches to MG065686 (UNVERIFIED: Campylobacter phage A18a, complete genome) position: , mismatch: 8, identity: 0.818

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
gcttcttgccggatgcggcgtgaacgccttatccggcctacaaa	Protospacer
 *.   **********.************************.*

59. spacer 1.1|2904235|44|NZ_CP006027|CRISPRCasFinder matches to MT230112 (Escherichia coli strain DH5alpha plasmid pESBL112, complete sequence) position: , mismatch: 8, identity: 0.818

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
ttatgttgccggatgcggcgtaaacgccttatccggcctacaaa	Protospacer
*.  * **********.****.*******************.*

60. spacer 4.1|3498262|32|NZ_CP006027|CRISPRCasFinder,CRT matches to NZ_AP014705 (Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence) position: , mismatch: 8, identity: 0.75

taagtg---atatccatcatcgcatccagtgcgcc	CRISPR spacer
---gtgcgcccctccatcaccgcttccagtgcgcc	Protospacer
   ***    . *******.*** ***********

61. spacer 5.3|3524264|30|NZ_CP006027|CRISPRCasFinder,CRT matches to LC528882 (Burkholderia phage FLC5 DNA, complete genome) position: , mismatch: 8, identity: 0.733

atgattgtcgattttttccgacaggatttt	CRISPR spacer
gctcgtgtcgatattttccgacaggctttc	Protospacer
..   ******* ************ ***.

62. spacer 5.3|3524264|30|NZ_CP006027|CRISPRCasFinder,CRT matches to HM461982 (Burkholderia phage KS14, complete genome) position: , mismatch: 8, identity: 0.733

atgattgtcgattttttccgacaggatttt	CRISPR spacer
gctcgtgtcgatcttttccgacaggctttc	Protospacer
..   *******.************ ***.

63. spacer 1.1|2904235|44|NZ_CP006027|CRISPRCasFinder matches to NZ_AP023208 (Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence) position: , mismatch: 9, identity: 0.795

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
gccgaacgccggatgcggcgtggacgccttatccggcctacata	Protospacer
 ***...*********.*****.******************.

64. spacer 1.1|2904235|44|NZ_CP006027|CRISPRCasFinder matches to NZ_AP023208 (Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence) position: , mismatch: 9, identity: 0.795

tccggg--tgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
--cggacttgccggatgcggcgtaaacgccttatccggccacgaac	Protospacer
  ***.  **********.****.****************   .**

65. spacer 1.1|2904235|44|NZ_CP006027|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 9, identity: 0.795

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgta	Protospacer
  .  .**********.*************************

66. spacer 1.1|2904235|44|NZ_CP006027|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 9, identity: 0.795

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgta	Protospacer
  .  .**********.*************************

67. spacer 1.1|2904235|44|NZ_CP006027|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 9, identity: 0.795

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgta	Protospacer
  .  .**********.*************************

68. spacer 1.1|2904235|44|NZ_CP006027|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 9, identity: 0.795

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgta	Protospacer
  .  .**********.*************************

69. spacer 1.1|2904235|44|NZ_CP006027|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 9, identity: 0.795

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgta	Protospacer
  .  .**********.*************************

70. spacer 1.1|2904235|44|NZ_CP006027|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 9, identity: 0.795

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgta	Protospacer
  .  .**********.*************************

71. spacer 1.1|2904235|44|NZ_CP006027|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 9, identity: 0.795

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgta	Protospacer
  .  .**********.*************************

72. spacer 1.1|2904235|44|NZ_CP006027|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 9, identity: 0.795

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgta	Protospacer
  .  .**********.*************************

73. spacer 1.1|2904235|44|NZ_CP006027|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 9, identity: 0.795

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
gtaaaatgccggatgcggcgtgaacgccttatccggcctacaaa	Protospacer
 . ...**********.************************.*

74. spacer 1.1|2904235|44|NZ_CP006027|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 9, identity: 0.795

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
agtcaatgccggatgcggcgtgaacgccttatccggcctacaaa	Protospacer
  . ..**********.************************.*

75. spacer 1.1|2904235|44|NZ_CP006027|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 9, identity: 0.795

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
gctttttgccggatgcggcgtaaacgccttatccggcctacggt	Protospacer
 *.   **********.****.********************..

76. spacer 1.1|2904235|44|NZ_CP006027|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 9, identity: 0.795

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
acaaaatgccggatgcggcgtaaacgccttatccggcctacaaa	Protospacer
 * ...**********.****.*******************.*

77. spacer 1.1|2904235|44|NZ_CP006027|CRISPRCasFinder matches to MG065691 (UNVERIFIED: Campylobacter phage A11a, complete genome) position: , mismatch: 9, identity: 0.795

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
acactttgccggatgcggcgtgaacgcctgatccggcctacggt	Protospacer
 *    **********.************ ************..

78. spacer 1.1|2904235|44|NZ_CP006027|CRISPRCasFinder matches to NZ_CP010208 (Escherichia coli strain M11 plasmid B, complete sequence) position: , mismatch: 9, identity: 0.795

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
cacaaccgccggatgcggcgtgaacgccttatccggcctacggg	Protospacer
. *.. .*********.*************************.

79. spacer 1.1|2904235|44|NZ_CP006027|CRISPRCasFinder matches to NZ_CP010208 (Escherichia coli strain M11 plasmid B, complete sequence) position: , mismatch: 9, identity: 0.795

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
cacaaccgccggatgcggcgtgaacgccttatccggcctacggg	Protospacer
. *.. .*********.*************************.

80. spacer 1.1|2904235|44|NZ_CP006027|CRISPRCasFinder matches to MG065686 (UNVERIFIED: Campylobacter phage A18a, complete genome) position: , mismatch: 9, identity: 0.795

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
acactttgccggatgcggcgtgaacgcctgatccggcctacggt	Protospacer
 *    **********.************ ************..

81. spacer 1.1|2904235|44|NZ_CP006027|CRISPRCasFinder matches to NZ_AP023209 (Escherichia coli strain TUM18781 plasmid pMTY18781-4, complete sequence) position: , mismatch: 9, identity: 0.795

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
tgtttatgccggatgcggtgtgaacgccttatccggcctacgga	Protospacer
* .  .**********.*.***********************.

82. spacer 1.1|2904235|44|NZ_CP006027|CRISPRCasFinder matches to NC_049343 (Escherichia phage 500465-2, complete genome) position: , mismatch: 9, identity: 0.795

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
agtgtttgccggatgcggcgtgaacgccttatccgacctacgtg	Protospacer
  .*  **********.******************.******

83. spacer 1.1|2904235|44|NZ_CP006027|CRISPRCasFinder matches to NZ_CP044308 (Escherichia coli strain C27A plasmid pC27A-3, complete sequence) position: , mismatch: 9, identity: 0.795

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
caccattgccggatgcggcgtaaacgccttatccggcctacaaa	Protospacer
. * . **********.****.*******************.*

84. spacer 1.1|2904235|44|NZ_CP006027|CRISPRCasFinder matches to NZ_CP053721 (Escherichia coli strain CP131_Sichuan plasmid pCP131-IncHI1, complete sequence) position: , mismatch: 9, identity: 0.795

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
tgttcatgccggatgcggcgtgaacgccttatccagcctacaaa	Protospacer
* .  .**********.*****************.******.*

85. spacer 1.1|2904235|44|NZ_CP006027|CRISPRCasFinder matches to NZ_CP019246 (Escherichia coli strain Combat13F7 plasmid pCombat13F7-1, complete sequence) position: , mismatch: 9, identity: 0.795

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
tgtttatgccggatgcggcgtaaacgccttatccggcctacaaa	Protospacer
* .  .**********.****.*******************.*

86. spacer 1.1|2904235|44|NZ_CP006027|CRISPRCasFinder matches to NZ_CP044299 (Escherichia coli strain P59A plasmid pP59A-CTX-M-55, complete sequence) position: , mismatch: 9, identity: 0.795

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
tgttcatgccggatgcggcgtgaacgccttatccagcctacaaa	Protospacer
* .  .**********.*****************.******.*

87. spacer 1.1|2904235|44|NZ_CP006027|CRISPRCasFinder matches to MT230312 (Escherichia coli strain DH5alpha plasmid pESBL31, complete sequence) position: , mismatch: 9, identity: 0.795

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
cacgatcgccggatgcggcgtgaacgccttatccgtcctacggt	Protospacer
. **. .*********.****************** ******..

88. spacer 4.1|3498262|32|NZ_CP006027|CRISPRCasFinder,CRT matches to NZ_CP017563 (Paraburkholderia sprentiae WSM5005 plasmid pl1WSM5005, complete sequence) position: , mismatch: 9, identity: 0.719

taagtgatatccatcatcgcatccagtgcgcc	CRISPR spacer
ctcatcgcatccatcatcggttccagtgcgcc	Protospacer
.  .* ..***********  ***********

89. spacer 4.4|3498445|32|NZ_CP006027|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP046258 (Gordonia sp. 135 plasmid pG135, complete sequence) position: , mismatch: 9, identity: 0.719

gacccacgcacacactgcgcgcagccctgatt	CRISPR spacer
gcgatacgcccacaccgcgcgcagcccttgtc	Protospacer
*   .**** *****.************ .*.

90. spacer 5.2|3524203|31|NZ_CP006027|CRISPRCasFinder,CRT matches to NZ_CP036488 (Rahnella aquatilis strain MEM40 plasmid pMEM40-1, complete sequence) position: , mismatch: 9, identity: 0.71

atttactgattgtaccaggtaggaaaagatc	CRISPR spacer
gtttactgattgtatcagataggatttattt	Protospacer
.*************.***.*****   . *.

91. spacer 5.2|3524203|31|NZ_CP006027|CRISPRCasFinder,CRT matches to NC_017060 (Rahnella aquatilis HX2 plasmid PRA1, complete sequence) position: , mismatch: 9, identity: 0.71

atttactgattgtaccaggtaggaaaagatc	CRISPR spacer
gtttactgattgtatcagataggatttattt	Protospacer
.*************.***.*****   . *.

92. spacer 5.2|3524203|31|NZ_CP006027|CRISPRCasFinder,CRT matches to NC_015062 (Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequence) position: , mismatch: 9, identity: 0.71

atttactgattgtaccaggtaggaaaagatc	CRISPR spacer
gtttactgattgtatcagataggatttattt	Protospacer
.*************.***.*****   . *.

93. spacer 5.2|3524203|31|NZ_CP006027|CRISPRCasFinder,CRT matches to NZ_CP034838 (Rahnella aquatilis strain KM12 plasmid pKM12v1, complete sequence) position: , mismatch: 9, identity: 0.71

atttactgattgtaccaggtaggaaaagatc	CRISPR spacer
gtttactgattgtatcagataggatttattt	Protospacer
.*************.***.*****   . *.

94. spacer 5.2|3524203|31|NZ_CP006027|CRISPRCasFinder,CRT matches to NZ_CP034839 (Rahnella aquatilis strain KM25 plasmid pKM12v2, complete sequence) position: , mismatch: 9, identity: 0.71

atttactgattgtaccaggtaggaaaagatc	CRISPR spacer
gtttactgattgtatcagataggatttattt	Protospacer
.*************.***.*****   . *.

95. spacer 5.2|3524203|31|NZ_CP006027|CRISPRCasFinder,CRT matches to NZ_CP034837 (Rahnella aquatilis strain KM05 plasmid pKM05, complete sequence) position: , mismatch: 9, identity: 0.71

atttactgattgtaccaggtaggaaaagatc	CRISPR spacer
gtttactgattgtatcagataggatttattt	Protospacer
.*************.***.*****   . *.

96. spacer 5.2|3524203|31|NZ_CP006027|CRISPRCasFinder,CRT matches to NZ_CP032297 (Rahnella aquatilis strain ZF7 plasmid pRAZF7, complete sequence) position: , mismatch: 9, identity: 0.71

atttactgattgtaccaggtaggaaaagatc	CRISPR spacer
gtttactgattgtatcagataggatttattt	Protospacer
.*************.***.*****   . *.

97. spacer 5.3|3524264|30|NZ_CP006027|CRISPRCasFinder,CRT matches to NC_014390 (Butyrivibrio proteoclasticus B316 plasmid pCY186, complete sequence) position: , mismatch: 9, identity: 0.7

atgattgtcgattttttccgacaggatttt	CRISPR spacer
atgattgtcgactttttccgattacctcgc	Protospacer
***********.*********. .  *. .

98. spacer 1.1|2904235|44|NZ_CP006027|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 10, identity: 0.773

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
cacaactgccggatgcggcgtgaacgccttatccgtcctaccgt	Protospacer
. *.. **********.****************** ***** ..

99. spacer 1.1|2904235|44|NZ_CP006027|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 10, identity: 0.773

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
cacaactgccggatgcggcgtgaacgccttatccgtcctaccgt	Protospacer
. *.. **********.****************** ***** ..

100. spacer 1.1|2904235|44|NZ_CP006027|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 10, identity: 0.773

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
cacaactgccggatgcggcgtgaacgccttatccgtcctaccgt	Protospacer
. *.. **********.****************** ***** ..

101. spacer 1.1|2904235|44|NZ_CP006027|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 10, identity: 0.773

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
cacaactgccggatgcggcgtgaacgccttatccgtcctaccgt	Protospacer
. *.. **********.****************** ***** ..

102. spacer 1.1|2904235|44|NZ_CP006027|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 10, identity: 0.773

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
gttgattgccggatgcggcgtaaacgccttatccggcctacatt	Protospacer
 ..*. **********.****.*******************. .

103. spacer 1.1|2904235|44|NZ_CP006027|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 10, identity: 0.773

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
cgttcataccggatgcggcgtgaacgccttatccggcctacaaa	Protospacer
. .  .*.********.************************.*

104. spacer 1.1|2904235|44|NZ_CP006027|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 10, identity: 0.773

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
cacaattgccggatgcggcgtaaacgccttatccggcctacatg	Protospacer
. *.. **********.****.*******************.

105. spacer 1.1|2904235|44|NZ_CP006027|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 10, identity: 0.773

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
ttttcttgccggatgcggcgtaaacgccttatccggcctacagg	Protospacer
*..   **********.****.*******************..

106. spacer 1.1|2904235|44|NZ_CP006027|CRISPRCasFinder matches to NZ_AP023207 (Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence) position: , mismatch: 10, identity: 0.773

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
agcaaatgccggatgcggcgtaaacgccttatccggcctacatt	Protospacer
  *...**********.****.*******************. .

107. spacer 1.1|2904235|44|NZ_CP006027|CRISPRCasFinder matches to NZ_CP010208 (Escherichia coli strain M11 plasmid B, complete sequence) position: , mismatch: 10, identity: 0.773

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
cacaaccgccagatgcggcgtgaacgccttatccggcctacaaa	Protospacer
. *.. .***.*****.************************.*

108. spacer 1.1|2904235|44|NZ_CP006027|CRISPRCasFinder matches to NZ_CP044308 (Escherichia coli strain C27A plasmid pC27A-3, complete sequence) position: , mismatch: 10, identity: 0.773

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
cacaactgccggatgcggcgtgaacgccttatccgtcctaccgt	Protospacer
. *.. **********.****************** ***** ..

109. spacer 2.1|2985558|56|NZ_CP006027|CRISPRCasFinder matches to NZ_AP023208 (Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence) position: , mismatch: 13, identity: 0.768

agttctaaccctgcgtaggcctgataagacgcgccagcgtcgcatcaggcaacggc	CRISPR spacer
catacgggcgactcgtaggcctgataagacgcgccagcgtcgcatcaggcaccgaa	Protospacer
 .* * ..*  . ************************************** **.

110. spacer 1.1|2904235|44|NZ_CP006027|CRISPRCasFinder matches to NZ_CP019906 (Escherichia coli strain MDR_56 plasmid unnamed5, complete sequence) position: , mismatch: 14, identity: 0.682

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
catcatggccggatgcggcgttaacgccttatccggccacttag	Protospacer
. . .  *********.**** ****************  . *

111. spacer 2.1|2985558|56|NZ_CP006027|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 17, identity: 0.696

--------agttctaaccctgcgtaggcctgataagacgcgccagcgtcgcatcaggcaa	CRISPR spacer
aagcgattgatttt--------gtaggcctgataagacgcggcagcgtcgcatcaggcat	Protospacer
        ..**.*        ******************* *****************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

551357 : 626283

Enterobacteria_phage(50.0%)

tail,head,portal,holin,protease,transposase,terminase,capsid,integrase,lysis

attL 554282:554297|attR 606181:606196

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000336726.1\|551357_552176_-\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	1.2e-65	45.2
WP_000088311.1\|552211_552514_-\|transposase	transposase	NA	NA	NA	NA
WP_001307618.1\|552635_553817_-	cyanate transporter CynX	NA	NA	NA	NA
WP_000616241.1\|553822_554293_-	cyanase	NA	NA	NA	NA
554282:554297	attL	NA	NA	NA	NA
WP_025404245.1\|554323_554983_-	carbonic anhydrase CynT	NA	NA	NA	NA
WP_022581475.1\|555092_555992_+	transcriptional regulator CynR	A0A2P0ZL89	Lactobacillus_phage	9.4e-16	27.0
WP_001299008.1\|556124_557408_-	cytosine/isoguanine deaminase	NA	NA	NA	NA
WP_025404246.1\|557397_558657_-	cytosine permease	NA	NA	NA	NA
WP_025404247.1\|558892_560779_-	propionate--CoA ligase	A0A2H4PQU7	Staphylococcus_phage	1.8e-53	29.4
WP_001275899.1\|560818_562270_-	2-methylcitrate dehydratase	NA	NA	NA	NA
WP_001205750.1\|562303_563473_-	2-methylcitrate synthase	NA	NA	NA	NA
WP_000052173.1\|563517_564408_-	methylisocitrate lyase	NA	NA	NA	NA
WP_000941050.1\|564646_566233_+	propionate catabolism operon regulatory protein PrpR	NA	NA	NA	NA
WP_000691953.1\|566330_566606_-	DUF1471 domain-containing protein	NA	NA	NA	NA
WP_000976987.1\|566752_567424_+	LysE family transporter	NA	NA	NA	NA
WP_000290614.1\|567440_567686_-	hypothetical protein	NA	NA	NA	NA
WP_024221672.1\|568098_568914_-	hypothetical protein	NA	NA	NA	NA
WP_000692736.1\|569156_570206_-	NADPH-dependent aldehyde reductase YahK	A0A2K9L339	Tupanvirus	1.7e-72	45.2
WP_000662404.1\|570582_571965_-	amidohydrolase family protein	NA	NA	NA	NA
WP_000661625.1\|571974_572925_-	carbamate kinase family protein	NA	NA	NA	NA
WP_134889244.1\|572956_573283_-	hypothetical protein	NA	NA	NA	NA
WP_000083465.1\|573254_574673_-	DUF1116 domain-containing protein	NA	NA	NA	NA
WP_000111816.1\|574672_576220_-	acyl-CoA synthetase FdrA	NA	NA	NA	NA
WP_024221671.1\|576209_577073_-	DUF2877 domain-containing protein	NA	NA	NA	NA
WP_022581412.1\|577467_577842_-	ankyrin repeat domain-containing protein	NA	NA	NA	NA
WP_001013899.1\|578099_578597_+	DUF1097 domain-containing protein	NA	NA	NA	NA
WP_001089563.1\|578688_579621_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_000146391.1\|579662_580751_-	EAL domain-containing protein	NA	NA	NA	NA
WP_072095750.1\|580892_584876_-	autotransporter adhesin EhaA	A0A2L1IV18	Escherichia_phage	5.5e-124	38.0
WP_000131059.1\|585448_587482_-\|holin	choline BCCT transporter BetT	A0A2I7QNT1	Vibrio_phage	1.7e-20	27.4
WP_001301903.1\|587610_588198_+	transcriptional regulator BetI	NA	NA	NA	NA
WP_000089079.1\|588211_589684_+	betaine-aldehyde dehydrogenase	NA	NA	NA	NA
WP_001159144.1\|589697_591368_+\|holin	choline dehydrogenase	A0A1V0S9M4	Catovirus	1.0e-60	31.2
WP_157832602.1\|592064_592199_-	hypothetical protein	NA	NA	NA	NA
WP_072095745.1\|592407_592995_+\|integrase	tyrosine-type recombinase/integrase	A0A2L1IV36	Escherichia_phage	1.5e-51	52.2
WP_001362383.1\|593324_594119_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_001213049.1\|594272_595034_+	hypothetical protein	NA	NA	NA	NA
WP_025404248.1\|595075_595642_+	hypothetical protein	NA	NA	NA	NA
WP_001135277.1\|597058_597556_+	lysozyme RrrD	M1FJA0	Enterobacteria_phage	5.4e-90	97.0
WP_001228695.1\|597772_597955_+\|lysis	prophage lysis lipoprotein RzoD	K7PHU6	Enterobacteria_phage	2.9e-17	98.3
WP_000738421.1\|598045_598339_-	increased serum survival lipoprotein Iss	K7PL54	Enterobacteria_phage	5.9e-44	90.7
WP_001307652.1\|598699_598894_-	YlcI/YnfO family protein	A0A0K2FIR8	Escherichia_phage	9.7e-27	96.8
WP_000453587.1\|599283_599829_+	DNA-packaging protein	A0A0K2FIG2	Enterobacteria_phage	1.4e-94	98.9
WP_001027269.1\|599803_601729_+\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	0.0e+00	99.5
WP_000198149.1\|601725_601932_+\|head,tail	Lambda prophage-derived head-to-tail joining protein W	A0A2R9YJL2	Escherichia_phage	5.8e-30	100.0
WP_001358553.1\|601928_603530_+\|portal	phage portal protein	A0A0K2FJC0	Enterobacteria_phage	2.9e-310	99.4
WP_025404250.1\|603510_604830_+	S49 family peptidase	A0A2I6TC87	Escherichia_phage	2.0e-232	98.4
WP_001358225.1\|604839_605172_+\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	2.5e-54	98.2
WP_000063244.1\|605227_606253_+\|capsid	major capsid protein	C6ZCY2	Enterobacteria_phage	1.8e-188	97.7
606181:606196	attR	NA	NA	NA	NA
WP_000158866.1\|606294_606690_+	DNA-packaging protein FI	A0A2R9YJP4	Escherichia_phage	5.2e-59	96.2
WP_000785282.1\|606701_607055_+\|tail	tail attachment protein	A0A2R9YJJ5	Escherichia_phage	6.4e-61	97.4
WP_000975081.1\|607066_607645_+\|tail	phage tail protein	A0A2R9YJK4	Escherichia_phage	5.9e-80	99.5
WP_000683105.1\|607641_608037_+\|tail	tail protein	A0A0K2FIF4	Enterobacteria_phage	1.0e-70	100.0
WP_001342267.1\|608044_608785_+\|tail	phage tail protein	A0A0K2FJ05	Enterobacteria_phage	1.0e-129	98.0
WP_000479169.1\|608800_609223_+\|tail	phage minor tail protein G	A0A0K2FIQ8	Enterobacteria_phage	3.1e-70	96.4
WP_000459457.1\|609204_609639_+\|tail	phage tail assembly protein T	A0A0K2FJB3	Enterobacteria_phage	6.9e-65	100.0
WP_025404251.1\|609631_612211_+\|tail	phage tail tape measure protein	A0A2R9YJM8	Escherichia_phage	0.0e+00	97.4
WP_000847347.1\|612207_612537_+\|tail	phage tail protein	A0A0K2FIE9	Enterobacteria_phage	3.6e-58	99.1
WP_001152619.1\|612536_613235_+\|tail	phage minor tail protein L	A0A0K2FJ01	Enterobacteria_phage	7.3e-133	99.1
WP_025404252.1\|613240_613984_+\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	2.1e-146	96.0
WP_000090891.1\|613920_614553_+\|tail	tail assembly protein	A0A2R9YJH6	Escherichia_phage	2.2e-96	99.5
WP_025404253.1\|614613_618111_+	host specificity protein J	A5LH43	Enterobacteria_phage	0.0e+00	97.2
WP_001233090.1\|618181_618781_+	Ail/Lom family protein	A5LH44	Enterobacteria_phage	8.2e-109	97.5
WP_025404254.1\|618845_621806_+	membrane protein	A0A2D1UII2	Escherichia_phage	3.0e-58	98.3
WP_000885574.1\|621805_622390_+\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	1.2e-101	93.8
WP_000239881.1\|622444_623113_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_000937502.1\|623169_623475_+\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	2.8e-12	76.5
WP_001226384.1\|623658_625143_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_001201825.1\|625329_626283_-\|protease	omptin family outer membrane protease OmpT	NA	NA	NA	NA

DBSCAN-SWA_2

838554 : 870762

Enterobacteria_phage(45.45%)

tail,head,portal,holin,transposase,terminase,capsid,integrase,lysis

attL 831894:831953|attR 855652:856342

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
831894:831953	attL	NA	NA	NA	NA
WP_032162118.1\|838554_839610_-\|integrase	tyrosine-type recombinase/integrase	K7P6P6	Enterobacteria_phage	4.9e-189	97.1
WP_000088311.1\|839625_839928_+\|transposase	transposase	NA	NA	NA	NA
WP_000336726.1\|839963_840782_+\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	1.2e-65	45.2
WP_001303849.1\|840869_841088_-	excisionase	Q77WA4	Escherichia_phage	3.7e-35	100.0
WP_000545728.1\|841127_841295_-	hypothetical protein	A0A0K2FJ46	Enterobacteria_phage	1.3e-27	98.2
WP_085961182.1\|841418_842631_+\|transposase	IS3-like element IS629 family transposase	Q6H9S3	Enterobacteria_phage	4.9e-169	99.7
WP_000411802.1\|843076_843283_-\|holin	holin	A0A0P0ZC45	Stx2-converting_phage	2.4e-31	100.0
WP_085947772.1\|843605_844818_+\|transposase	IS3 family transposase	Q716C2	Shigella_phage	8.3e-100	57.1
WP_001358663.1\|846466_847663_+\|transposase	IS110-like element ISEc20 family transposase	NA	NA	NA	NA
WP_025404260.1\|847641_848292_-	SASA family carbohydrate esterase	H6WZJ9	Escherichia_phage	3.1e-109	92.1
WP_000499454.1\|848590_848749_-	DUF3927 family protein	NA	NA	NA	NA
WP_001302581.1\|848834_849578_-	hypothetical protein	NA	NA	NA	NA
WP_001097238.1\|849762_850452_-	Q antiterminator encoded by prophage CP-933P	I6PDF8	Cronobacter_phage	1.5e-58	48.1
WP_032160865.1\|850466_850589_-	YlcG family protein	NA	NA	NA	NA
WP_000750155.1\|850926_851886_+	lipid A deacylase LpxR family protein	NA	NA	NA	NA
WP_001028841.1\|852097_852763_-	serine/threonine protein phosphatase	Q5TJL8	Enterobacteria_phage	4.4e-127	96.4
WP_001108038.1\|852759_853371_-	recombination protein NinG	Q716C3	Shigella_phage	6.0e-99	99.5
WP_000566868.1\|853363_853534_-	protein ninF	Q8H9Z5	Enterobacteria_phage	1.2e-25	98.2
WP_001254222.1\|853530_853713_-	NinE family protein	Q8H9Z6	Enterobacteria_phage	1.9e-29	100.0
WP_000153262.1\|853709_854237_-	phage N-6-adenine-methyltransferase	Q8H9Z7	Enterobacteria_phage	3.6e-100	99.4
WP_000736898.1\|854233_854674_-	recombination protein NinB	Q8H9Z8	Enterobacteria_phage	4.1e-81	100.0
WP_029594380.1\|854747_855020_-	protein ren	A0A1I9LJP5	Stx_converting_phage	1.0e-42	98.9
WP_064758453.1\|854962_855097_-	hypothetical protein	A0A0N7BTS3	Escherichia_phage	1.0e-06	96.2
WP_085961182.1\|855062_856276_-\|transposase	IS3-like element IS629 family transposase	Q6H9S3	Enterobacteria_phage	4.9e-169	99.7
WP_000092318.1\|856424_856862_+\|lysis	lysis protein	A0A0P0ZBQ9	Stx2-converting_phage	2.0e-72	100.0
855652:856342	attR	NA	NA	NA	NA
WP_000881338.1\|857011_857629_+	hypothetical protein	A0A1R3Y613	Salmonella_virus	1.2e-91	85.4
WP_001307652.1\|857816_858011_-	YlcI/YnfO family protein	A0A0K2FIR8	Escherichia_phage	9.7e-27	96.8
WP_000235436.1\|858405_858915_+\|terminase	terminase	A0A1I9KFT4	Aeromonas_phage	1.6e-12	32.7
WP_000259002.1\|860797_861004_+\|head,tail	head-tail joining protein	K7PM10	Enterobacteria_phage	7.9e-11	56.9
WP_025404261.1\|861000_862593_+\|portal	phage portal protein	K7P6U7	Enterobacteria_phage	1.9e-184	61.1
WP_024239710.1\|862582_864088_+	S49 family peptidase	A0A2I6TC87	Escherichia_phage	1.2e-100	54.2
WP_000256846.1\|864124_864472_+\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	9.9e-22	55.9
WP_000522623.1\|864529_865558_+\|capsid	major capsid protein	C6ZCY2	Enterobacteria_phage	5.0e-114	61.9
WP_000201512.1\|865609_865993_+	DNA-packaging protein FI	NA	NA	NA	NA
WP_025380275.1\|865985_866435_+	host specificity protein J	Q9LA64	Enterobacterial_phage	2.3e-55	98.1
WP_025404262.1\|866502_867075_+	Ail/Lom family outer membrane beta-barrel protein	A0A0P0ZCF6	Stx2-converting_phage	2.3e-100	93.5
WP_025404263.1\|867139_868453_+\|tail	tail fiber protein	A0A0P0ZD68	Stx2-converting_phage	3.3e-78	99.1
WP_001023459.1\|868454_868724_+\|tail	phage tail protein	Q687E5	Enterobacteria_phage	4.6e-43	96.6
WP_000950982.1\|868829_869711_+	hypothetical protein	A5LH48	Enterobacteria_phage	3.9e-147	90.4
WP_000652081.1\|869934_870762_+	type III secretion system effector Cif	A5LH49	Enterobacteria_phage	3.1e-154	98.2

DBSCAN-SWA_3

1102064 : 1173646

Enterobacteria_phage(37.25%)

tail,head,portal,holin,protease,transposase,terminase,capsid,integrase

attL 1117160:1117219|attR 1168910:1168974

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000156509.1\|1102064_1103825_-\|protease	Lon protease family protein	NA	NA	NA	NA
WP_000877161.1\|1104010_1104463_+	macrodomain Ter protein MatP	NA	NA	NA	NA
WP_000750414.1\|1104537_1105593_-	porin OmpA	NA	NA	NA	NA
WP_000288710.1\|1105949_1106459_-	cell division inhibitor SulA	NA	NA	NA	NA
WP_000839153.1\|1106677_1107307_+	CRP-S regulon transcriptional coactivator Sxy	NA	NA	NA	NA
WP_000875041.1\|1107269_1109432_-	TIGR01666 family membrane protein	NA	NA	NA	NA
WP_001261235.1\|1109441_1109888_-	YccF domain-containing protein	NA	NA	NA	NA
WP_000420536.1\|1110010_1112065_+	DNA helicase IV	A7KV33	Bacillus_phage	1.0e-20	27.9
WP_000424181.1\|1112096_1112555_-	methylglyoxal synthase	NA	NA	NA	NA
WP_000847791.1\|1112650_1113313_-	DUF2057 family protein	NA	NA	NA	NA
WP_000665217.1\|1113485_1113899_+	CoA-binding protein	NA	NA	NA	NA
WP_001295356.1\|1113943_1114261_-	heat shock protein HspQ	NA	NA	NA	NA
WP_000116291.1\|1114318_1115509_-	23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI	NA	NA	NA	NA
WP_000048228.1\|1115603_1115882_+	acylphosphatase	NA	NA	NA	NA
WP_000904442.1\|1115878_1116208_-	sulfurtransferase TusE	NA	NA	NA	NA
WP_000375136.1\|1116298_1116958_-\|protease	FtsH protease modulator YccA	A0A2H4JFM9	uncultured_Caudovirales_phage	4.0e-48	55.3
1117160:1117219	attL	NA	NA	NA	NA
WP_001299351.1\|1117365_1118385_-\|integrase	tyrosine-type recombinase/integrase	A0A192Y7M7	Salmonella_phage	1.3e-85	49.7
WP_000273151.1\|1118362_1118605_-	DUF4224 domain-containing protein	NA	NA	NA	NA
WP_025404266.1\|1118672_1121144_-	exonuclease	K7PLW7	Enterobacteria_phage	1.5e-58	60.3
WP_001098307.1\|1121237_1121429_-	DUF1482 family protein	NA	NA	NA	NA
WP_000413705.1\|1121425_1121614_-	cell division inhibition protein DicB	NA	NA	NA	NA
WP_001133037.1\|1122187_1122397_+	hypothetical protein	NA	NA	NA	NA
WP_000394548.1\|1122397_1123036_-	hypothetical protein	A0A2R2Z306	Escherichia_phage	2.5e-07	41.9
WP_000379552.1\|1123047_1123200_-	DUF1391 family protein	M4QQ57	Salicola_phage	6.0e-08	55.3
WP_001416688.1\|1123492_1123831_-	peptidase S24	H9C160	Pectobacterium_phage	1.9e-06	30.1
WP_000747948.1\|1124222_1124465_+	hypothetical protein	H9C161	Pectobacterium_phage	4.8e-07	55.8
WP_000693858.1\|1124448_1124874_+	hypothetical protein	NA	NA	NA	NA
WP_025404268.1\|1124945_1126052_+	hypothetical protein	A0A088CD36	Shigella_phage	1.8e-64	65.7
WP_000788742.1\|1126058_1126805_+	ATP-binding protein	A0A088CBP4	Shigella_phage	5.6e-115	84.6
WP_000451007.1\|1126826_1127597_+	DUF1627 domain-containing protein	A0A0U2SAW4	Escherichia_phage	1.6e-80	64.5
WP_001151233.1\|1127612_1128026_+	DUF977 family protein	A0A0U2QQN3	Escherichia_phage	9.8e-61	89.1
WP_000160654.1\|1128377_1129151_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_000955173.1\|1129516_1129654_-	hypothetical protein	Q7Y2Q9	Escherichia_phage	5.4e-08	96.6
WP_001013636.1\|1129698_1129911_+	type I toxin-antitoxin system Hok family toxin	A0A0U2QV81	Escherichia_phage	8.9e-26	96.9
WP_001341388.1\|1130078_1130357_+	hypothetical protein	I6PCV7	Cronobacter_phage	5.7e-12	48.4
WP_001265141.1\|1130358_1131408_+	DUF968 domain-containing protein	U5P0K4	Shigella_phage	1.5e-110	54.9
WP_001217436.1\|1131420_1131792_+	RusA family crossover junction endodeoxyribonuclease	V5URS4	Shigella_phage	1.3e-35	63.7
WP_000090265.1\|1131781_1132153_+	antitermination protein	Q777W5	Enterobacteria_phage	1.0e-53	84.0
WP_000265267.1\|1132304_1133123_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_000917737.1\|1133409_1133607_+	hypothetical protein	S5MQK8	Escherichia_phage	2.6e-27	96.9
WP_113706111.1\|1133744_1134458_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_001368722.1\|1134907_1135339_+	tellurite resistance protein	H6WZJ6	Escherichia_phage	1.6e-66	96.5
WP_025404270.1\|1135817_1137653_+	SASA family carbohydrate esterase	B6DZ89	Enterobacteria_phage	0.0e+00	96.0
WP_085961182.1\|1137678_1138891_+\|transposase	IS3-like element IS629 family transposase	Q6H9S3	Enterobacteria_phage	4.9e-169	99.7
WP_000411809.1\|1140840_1141047_+\|holin	holin	Q6H9V8	Enterobacteria_phage	2.4e-31	100.0
WP_000731192.1\|1141051_1141396_+	YdfR family protein	A0A0P0ZD64	Stx2-converting_phage	6.5e-58	98.2
WP_000992157.1\|1141446_1141980_+	lysozyme	B6DZ92	Enterobacteria_phage	3.1e-99	95.5
WP_001303555.1\|1142135_1142318_+	hypothetical protein	NA	NA	NA	NA
WP_001280929.1\|1142330_1142462_+	hypothetical protein	A0A0N7BYT9	Escherichia_phage	9.4e-10	88.4
WP_012816791.1\|1142689_1142875_+	membrane protein	A0A0P0ZCT3	Stx2-converting_phage	1.2e-18	100.0
WP_001303878.1\|1143402_1143717_+	PerC family transcriptional regulator	NA	NA	NA	NA
WP_001300236.1\|1143798_1144023_-	DUF3950 domain-containing protein	A0A0K2FIR8	Escherichia_phage	2.9e-19	88.7
WP_000235436.1\|1144424_1144934_+\|terminase	terminase	A0A1I9KFT4	Aeromonas_phage	1.6e-12	32.7
WP_025404272.1\|1144905_1146834_+\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	1.8e-261	65.9
WP_000259002.1\|1146817_1147024_+\|head,tail	head-tail joining protein	K7PM10	Enterobacteria_phage	7.9e-11	56.9
WP_000831765.1\|1147020_1148613_+\|portal	phage portal protein	K7P6U7	Enterobacteria_phage	3.2e-184	60.9
WP_000256809.1\|1150613_1150961_+\|head	head decoration protein	C6ZCY1	Enterobacteria_phage	2.6e-22	58.1
WP_000522615.1\|1151018_1152047_+\|capsid	major capsid protein	C6ZCY2	Enterobacteria_phage	3.9e-114	60.7
WP_000201523.1\|1152098_1152473_+	hypothetical protein	NA	NA	NA	NA
WP_001204549.1\|1152465_1152819_+\|tail	tail attachment protein	A0A0K2FJB7	Enterobacteria_phage	8.7e-42	70.1
WP_000975046.1\|1152834_1153368_+\|tail	phage tail protein	A0A2R9YJK4	Escherichia_phage	2.2e-57	65.1
WP_000683066.1\|1153364_1153760_+\|tail	tail protein	A0A2R9YJI2	Escherichia_phage	3.9e-59	83.2
WP_001357739.1\|1153767_1154520_+\|tail	phage tail protein	Q687F6	Enterobacteria_phage	1.6e-133	98.0
WP_000479105.1\|1154533_1154965_+\|tail	phage minor tail protein G	A0A0K2FIQ8	Enterobacteria_phage	3.7e-42	68.8
WP_000533423.1\|1154991_1155405_+\|tail	phage tail assembly protein T	S5MDP5	Escherichia_phage	2.7e-42	82.2
WP_025404275.1\|1155385_1157965_+\|tail	phage tail tape measure protein	A0A2R9YJM8	Escherichia_phage	0.0e+00	82.4
WP_025404276.1\|1157961_1158291_+\|tail	phage tail protein	Q687F2	Enterobacteria_phage	2.2e-55	94.5
WP_025380437.1\|1158290_1158989_+\|tail	phage minor tail protein L	A0A0P0ZBE3	Stx2-converting_phage	5.6e-133	99.6
WP_025404277.1\|1158999_1159743_+\|tail	phage tail protein	Q6H9T4	Enterobacteria_phage	1.1e-147	97.2
WP_148294918.1\|1159688_1160321_+\|tail	tail assembly protein	Q6H9T3	Enterobacteria_phage	3.4e-105	98.1
WP_000649829.1\|1160511_1161039_-	superoxide dismutase family protein	Q9MC02	Salmonella_phage	1.8e-59	60.5
WP_025404279.1\|1161172_1164646_+	host specificity protein J	A0A0P0ZCI5	Stx2-converting_phage	0.0e+00	97.1
WP_025404280.1\|1164713_1165313_+	Ail/Lom family outer membrane beta-barrel protein	Q687E7	Enterobacteria_phage	2.6e-110	98.5
WP_025404281.1\|1165377_1166691_+\|tail	tail fiber protein	A0A0P0ZD68	Stx2-converting_phage	3.3e-78	99.1
WP_001023408.1\|1166692_1166962_+	hypothetical protein	H6WZN0	Escherichia_phage	1.9e-44	97.8
WP_038426800.1\|1167088_1167982_-	Tir-cytoskeleton coupling protein TccP2	NA	NA	NA	NA
WP_001443410.1\|1168427_1168811_-	hypothetical protein	Q6H9S1	Enterobacteria_phage	4.4e-55	84.3
WP_001058323.1\|1169427_1170546_+	hydrogenase 1 small subunit	NA	NA	NA	NA
1168910:1168974	attR	NA	NA	NA	NA
WP_000107384.1\|1170542_1172336_+	Ni/Fe-hydrogenase large subunit	NA	NA	NA	NA
WP_001186424.1\|1172354_1173062_+	Ni/Fe-hydrogenase b-type cytochrome subunit	NA	NA	NA	NA
WP_000003670.1\|1173058_1173646_+\|protease	hydrogenase 1 maturation protease	NA	NA	NA	NA

DBSCAN-SWA_4

1407946 : 1478921

Stx2-converting_phage(27.27%)

tail,tRNA,head,terminase,transposase,capsid,integrase

attL 1422324:1422339|attR 1473210:1473225

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_022581747.1\|1407946_1409065_-\|integrase	tyrosine-type recombinase/integrase	Q77Z04	Phage_21	3.5e-84	44.2
WP_000003742.1\|1409033_1409303_-	excisionase	NA	NA	NA	NA
WP_025404296.1\|1409364_1411836_-	exonuclease	K7PLW7	Enterobacteria_phage	8.5e-59	60.3
WP_000199480.1\|1411931_1412120_-	DUF1482 family protein	NA	NA	NA	NA
WP_000449172.1\|1412116_1412305_-	cell division inhibitor	NA	NA	NA	NA
WP_001342117.1\|1412704_1412872_+	hypothetical protein	NA	NA	NA	NA
WP_000920491.1\|1412865_1413099_+	hypothetical protein	NA	NA	NA	NA
WP_000394552.1\|1413076_1413484_-	hypothetical protein	A0A2R2Z306	Escherichia_phage	7.0e-11	37.8
WP_001171903.1\|1413506_1413725_-	hypothetical protein	NA	NA	NA	NA
WP_001240336.1\|1413797_1414097_-	hypothetical protein	NA	NA	NA	NA
WP_000787428.1\|1414361_1414769_-	helix-turn-helix domain-containing protein	I6PD69	Cronobacter_phage	9.8e-29	49.6
WP_000705622.1\|1415055_1415607_+	hypothetical protein	NA	NA	NA	NA
WP_000020557.1\|1415578_1416619_+	hypothetical protein	A0A0U2RT81	Escherichia_phage	3.9e-90	86.7
WP_157832601.1\|1416530_1417073_+	replication protein	A0A0U2JGJ0	Escherichia_phage	1.5e-85	98.7
WP_000450692.1\|1417106_1417841_+	DUF1627 domain-containing protein	A0A0U2SAW4	Escherichia_phage	7.7e-109	84.7
WP_001505071.1\|1417837_1418002_+	hypothetical protein	NA	NA	NA	NA
WP_032162026.1\|1418699_1419458_+	AcfC family adhesin Paa	NA	NA	NA	NA
WP_000961821.1\|1419735_1419948_+	type I toxin-antitoxin system Hok family toxin	A0A0U2QV81	Escherichia_phage	1.3e-16	72.9
WP_025404298.1\|1420168_1420429_+	hypothetical protein	NA	NA	NA	NA
WP_038426828.1\|1420495_1420774_+	hypothetical protein	I6PCV7	Cronobacter_phage	2.2e-11	48.4
WP_001265289.1\|1420775_1421831_+	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	2.9e-88	47.6
WP_000140002.1\|1421831_1422197_+	RusA family crossover junction endodeoxyribonuclease	V5URS4	Shigella_phage	1.6e-38	67.5
WP_001059384.1\|1422193_1422883_+	antiterminator	I6PDF8	Cronobacter_phage	4.0e-59	51.1
1422324:1422339	attL	NA	NA	NA	NA
WP_025404299.1\|1423681_1424245_+\|terminase	terminase small subunit	A0A0N7KZJ8	Stx2-converting_phage	2.1e-82	94.7
WP_025404300.1\|1424241_1425903_+\|terminase	terminase large subunit	H6WZK9	Escherichia_phage	0.0e+00	98.4
WP_025404301.1\|1425966_1427904_+\|capsid	phage major capsid protein	A0A0P0ZCT9	Stx2-converting_phage	0.0e+00	98.3
WP_001063027.1\|1427948_1428170_+	hypothetical protein	H6WZL1	Escherichia_phage	9.9e-36	98.6
WP_000125968.1\|1430695_1431022_+\|head,tail	phage gp6-like head-tail connector protein	B6ETF0	Enterobacteria_phage	2.7e-53	98.1
WP_001007905.1\|1431032_1431383_+\|head	phage head closure protein	A0A0P0ZB28	Stx2-converting_phage	1.6e-59	100.0
WP_000573374.1\|1431379_1431826_+	HK97 gp10 family phage protein	A0A0P0ZCD2	Stx2-converting_phage	8.1e-77	100.0
WP_000133391.1\|1431822_1432167_+	DUF3168 domain-containing protein	A0A0P0ZC17	Stx2-converting_phage	9.4e-57	99.1
WP_001275505.1\|1432225_1432942_+	hypothetical protein	A0A0P0ZD29	Stx2-converting_phage	5.2e-126	97.5
WP_001453698.1\|1433416_1433626_+	DUF4035 domain-containing protein	A0A0P0ZDE6	Stx2-converting_phage	2.0e-33	100.0
WP_077697708.1\|1434611_1436915_+\|tail	phage tail tape measure protein	B6ETF7	Enterobacteria_phage	0.0e+00	99.6
WP_000807940.1\|1436907_1437249_+\|tail	phage tail protein	A0A0P0ZBQ8	Stx2-converting_phage	4.7e-61	97.3
WP_025404305.1\|1437248_1437947_+\|tail	phage minor tail protein L	B6DZB1	Enterobacteria_phage	4.9e-129	96.1
WP_000194723.1\|1437957_1438701_+\|tail	phage tail protein	Q6H9T4	Enterobacteria_phage	5.0e-148	98.0
WP_148294919.1\|1438646_1439276_+\|tail	tail assembly protein	Q9EYE5	Enterobacteria_phage	1.8e-106	96.2
WP_025404307.1\|1439516_1442993_+	host specificity protein J	A0A0P0ZBW1	Stx2-converting_phage	0.0e+00	97.2
WP_025404308.1\|1443059_1443659_+	Ail/Lom family outer membrane beta-barrel protein	A0A0P0ZBV0	Stx2-converting_phage	2.0e-110	99.0
WP_023307795.1\|1443723_1445037_+	hypothetical protein	A0A0P0ZD68	Stx2-converting_phage	3.3e-78	99.1
WP_025404309.1\|1445038_1445308_+\|tail	phage tail protein	A0A1U9AJC2	Stx1_converting_phage	3.2e-44	98.9
WP_115801847.1\|1445414_1445504_+	hypothetical protein	NA	NA	NA	NA
WP_001453949.1\|1445523_1447872_+	type III secretion system effector E3 ubiquitin ligase NleL	NA	NA	NA	NA
WP_001301984.1\|1448462_1451864_+	type III secretion system effector EspN	A0A0N7KZG3	Stx2-converting_phage	1.7e-219	39.2
WP_148294915.1\|1452406_1453483_-\|transposase	IS3 family transposase	Q9ZXG3	Shigella_phage	2.7e-174	97.7
WP_001301834.1\|1455280_1455406_+	hypothetical protein	Q8HAB2	Salmonella_phage	8.7e-05	58.3
WP_001303921.1\|1455485_1455761_-	hypothetical protein	NA	NA	NA	NA
WP_000938118.1\|1455821_1457183_-	type III secretion system effector EspK	Q9MBM1	Phage_Gifsy-1	1.4e-50	29.2
WP_000799400.1\|1457546_1458410_-	spermidine/putrescine ABC transporter permease PotB	Q6GZ02	Mycoplasma_phage	6.7e-11	28.7
WP_000531594.1\|1458393_1459530_-	spermidine/putrescine ABC transporter ATP-binding protein PotA	Q6GZ03	Mycoplasma_phage	5.5e-29	39.8
WP_000359446.1\|1459779_1461006_+	peptidase T	NA	NA	NA	NA
WP_001295435.1\|1461054_1462176_-	[50S ribosomal protein L16]-arginine 3-hydroxylase	NA	NA	NA	NA
WP_000085256.1\|1462424_1463654_+\|integrase	site-specific integrase	A0A2H4JB45	uncultured_Caudovirales_phage	3.8e-132	56.1
WP_000953272.1\|1464018_1464207_+	AlpA family transcriptional regulator	A0A2H4JB58	uncultured_Caudovirales_phage	2.0e-13	66.0
WP_125090562.1\|1464256_1464583_-	hypothetical protein	NA	NA	NA	NA
WP_000106745.1\|1464707_1464881_-	hypothetical protein	A0A2H4JB52	uncultured_Caudovirales_phage	8.4e-06	51.2
WP_000226782.1\|1465011_1465209_+	host cell division inhibitor Icd-like protein	NA	NA	NA	NA
WP_000609225.1\|1465201_1465414_+	hypothetical protein	NA	NA	NA	NA
WP_000551675.1\|1465403_1465868_+	hypothetical protein	NA	NA	NA	NA
WP_001204985.1\|1465860_1466094_+	hypothetical protein	NA	NA	NA	NA
WP_000770178.1\|1466099_1466399_+	DUF4222 domain-containing protein	NA	NA	NA	NA
WP_000833618.1\|1466395_1467796_+	AAA family ATPase	A0A2H4JFA4	uncultured_Caudovirales_phage	9.6e-116	49.6
WP_000192401.1\|1467996_1468248_+	hypothetical protein	NA	NA	NA	NA
WP_000126687.1\|1468244_1468655_+	single-stranded DNA-binding protein	NA	NA	NA	NA
WP_000233304.1\|1468665_1468938_+	PerC family transcriptional regulator	NA	NA	NA	NA
WP_001132079.1\|1469064_1469289_+	hypothetical protein	NA	NA	NA	NA
WP_000796958.1\|1469540_1469747_+	hypothetical protein	NA	NA	NA	NA
WP_025404312.1\|1469746_1470802_+\|capsid	major capsid protein	C6ZCY2	Enterobacteria_phage	9.2e-71	44.0
WP_000380886.1\|1470814_1471150_+\|head	head decoration protein	NA	NA	NA	NA
WP_000224599.1\|1471162_1471576_+	hypothetical protein	NA	NA	NA	NA
WP_000835281.1\|1471781_1472324_+\|terminase	terminase	O64316	Escherichia_phage	1.8e-33	44.2
WP_000133424.1\|1472580_1472862_+	hypothetical protein	NA	NA	NA	NA
WP_000735412.1\|1473463_1474924_-	two-component system sensor histidine kinase PhoQ	NA	NA	NA	NA
1473210:1473225	attR	NA	NA	NA	NA
WP_001265481.1\|1474923_1475595_-	two-component system response regulator PhoP	NA	NA	NA	NA
WP_000423742.1\|1475763_1477134_-	adenylosuccinate lyase	A0A2H4UUU6	Bodo_saltans_virus	1.2e-107	44.9
WP_001297479.1\|1477137_1477779_-	high frequency lysogenization protein HflD	NA	NA	NA	NA
WP_001353282.1\|1477814_1478921_-\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA

DBSCAN-SWA_5

1591322 : 1649515

Stx2-converting_phage(29.41%)

tail,head,protease,terminase,capsid,integrase

attL 1591159:1591186|attR 1633672:1633699

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1591159:1591186	attL	NA	NA	NA	NA
WP_000113674.1\|1591322_1592453_-\|integrase	tyrosine-type recombinase/integrase	O21940	Phage_21	3.4e-103	51.4
WP_000113189.1\|1592430_1592679_-	excisionase	NA	NA	NA	NA
WP_025404315.1\|1592743_1595215_-	exonuclease	A0A192Y6E0	Salmonella_phage	1.1e-58	58.2
WP_000199480.1\|1595310_1595499_-	DUF1482 family protein	NA	NA	NA	NA
WP_000449172.1\|1595495_1595684_-	cell division inhibitor	NA	NA	NA	NA
WP_001342117.1\|1596083_1596251_+	hypothetical protein	NA	NA	NA	NA
WP_000920491.1\|1596244_1596478_+	hypothetical protein	NA	NA	NA	NA
WP_000394552.1\|1596455_1596863_-	hypothetical protein	A0A2R2Z306	Escherichia_phage	7.0e-11	37.8
WP_001171903.1\|1596885_1597104_-	hypothetical protein	NA	NA	NA	NA
WP_001240336.1\|1597176_1597476_-	hypothetical protein	NA	NA	NA	NA
WP_000787428.1\|1597740_1598148_-	helix-turn-helix domain-containing protein	I6PD69	Cronobacter_phage	9.8e-29	49.6
WP_000912298.1\|1598224_1598452_+	transcriptional regulator	NA	NA	NA	NA
WP_000705622.1\|1598435_1598987_+	hypothetical protein	NA	NA	NA	NA
WP_000020557.1\|1598958_1599999_+	hypothetical protein	A0A0U2RT81	Escherichia_phage	3.9e-90	86.7
WP_157832601.1\|1599910_1600453_+	replication protein	A0A0U2JGJ0	Escherichia_phage	1.5e-85	98.7
WP_000450692.1\|1600486_1601221_+	DUF1627 domain-containing protein	A0A0U2SAW4	Escherichia_phage	7.7e-109	84.7
WP_001505071.1\|1601217_1601382_+	hypothetical protein	NA	NA	NA	NA
WP_032162026.1\|1602079_1602838_+	AcfC family adhesin Paa	NA	NA	NA	NA
WP_000961821.1\|1603116_1603329_+	type I toxin-antitoxin system Hok family toxin	A0A0U2QV81	Escherichia_phage	1.3e-16	72.9
WP_001217394.1\|1603549_1603807_+	hypothetical protein	NA	NA	NA	NA
WP_010917803.1\|1603876_1604155_+	hypothetical protein	I6PCV7	Cronobacter_phage	2.2e-11	48.4
WP_001265289.1\|1604156_1605212_+	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	2.9e-88	47.6
WP_000140002.1\|1605212_1605578_+	RusA family crossover junction endodeoxyribonuclease	V5URS4	Shigella_phage	1.6e-38	67.5
WP_001059384.1\|1605574_1606264_+	antiterminator	I6PDF8	Cronobacter_phage	4.0e-59	51.1
WP_025404316.1\|1607062_1607626_+\|terminase	terminase small subunit	B6DZ97	Enterobacteria_phage	1.4e-81	93.0
WP_025404317.1\|1607622_1609284_+\|terminase	terminase large subunit	H6WZK9	Escherichia_phage	0.0e+00	98.2
WP_025404318.1\|1609348_1611286_+\|capsid	phage major capsid protein	A0A0P0ZCT9	Stx2-converting_phage	0.0e+00	98.4
WP_001074112.1\|1611330_1611552_+	hypothetical protein	H6WZL1	Escherichia_phage	3.2e-34	95.9
WP_000125988.1\|1614240_1614567_+\|head,tail	phage gp6-like head-tail connector protein	B6ETF0	Enterobacteria_phage	7.0e-54	100.0
WP_001007889.1\|1614577_1614928_+\|head	phage head closure protein	A0A0P0ZDP7	Stx2-converting_phage	2.7e-59	100.0
WP_000573391.1\|1614924_1615371_+	HK97 gp10 family phage protein	A0A0N7KZI9	Stx2-converting_phage	5.2e-76	100.0
WP_000133393.1\|1615367_1615712_+	DUF3168 domain-containing protein	A0A0P0ZC17	Stx2-converting_phage	9.4e-57	99.1
WP_022581165.1\|1615779_1616496_+\|tail	tail protein	A0A0P0ZD29	Stx2-converting_phage	1.2e-125	97.1
WP_001030063.1\|1616501_1616876_+\|tail	tail assembly protein	A0A0N7KZA2	Stx2-converting_phage	7.8e-65	100.0
WP_001453698.1\|1616971_1617181_+	DUF4035 domain-containing protein	A0A0P0ZDE6	Stx2-converting_phage	2.0e-33	100.0
WP_025404321.1\|1617232_1620475_+\|tail	phage tail tape measure protein	B6ETF7	Enterobacteria_phage	0.0e+00	99.6
WP_000807954.1\|1620467_1620809_+\|tail	phage tail protein	A0A0P0ZBQ8	Stx2-converting_phage	5.1e-63	100.0
WP_025404322.1\|1620808_1621507_+\|tail	phage minor tail protein L	A0A0P0ZD44	Stx2-converting_phage	3.4e-130	96.6
WP_000194723.1\|1621517_1622261_+\|tail	phage tail protein	Q6H9T4	Enterobacteria_phage	5.0e-148	98.0
WP_050439450.1\|1622206_1622839_+\|tail	tail assembly protein	B6ETG3	Enterobacteria_phage	3.9e-101	97.1
WP_025404323.1\|1623181_1626655_+	host specificity protein J	A0A0P0ZBW1	Stx2-converting_phage	0.0e+00	89.9
WP_001303943.1\|1627956_1628235_-	hypothetical protein	NA	NA	NA	NA
WP_001414184.1\|1628662_1628809_+	hypothetical protein	NA	NA	NA	NA
WP_001401309.1\|1628945_1629593_-	T3SS effector E3 ubiquitin-protein ligase NleG	B6ETE1	Enterobacteria_phage	1.9e-42	41.6
WP_001144877.1\|1629776_1630367_+	T3SS effector guanine nucleotide exchange factor EspM1	NA	NA	NA	NA
WP_000147167.1\|1633129_1633348_-	hypothetical protein	NA	NA	NA	NA
WP_001079499.1\|1633849_1634356_-	ferritin-like domain-containing protein	NA	NA	NA	NA
1633672:1633699	attR	NA	NA	NA	NA
WP_001056550.1\|1634401_1634902_-	ferritin-like domain-containing protein	NA	NA	NA	NA
WP_000807658.1\|1634987_1635167_-	general stress protein	NA	NA	NA	NA
WP_000443065.1\|1635547_1636354_-	tryptophan synthase subunit alpha	NA	NA	NA	NA
WP_000209513.1\|1636353_1637547_-	tryptophan synthase subunit beta	NA	NA	NA	NA
WP_024221648.1\|1637558_1638917_-	bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF	A0A0P0IR83	Acinetobacter_phage	3.9e-37	41.2
WP_000763498.1\|1638920_1640516_-	bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD	A0A0N7IRD9	Acinetobacter_phage	3.8e-52	38.5
WP_001194605.1\|1640515_1642078_-	anthranilate synthase component I	NA	NA	NA	NA
WP_001386774.1\|1642169_1642214_-	trp operon leader peptide	NA	NA	NA	NA
WP_001285684.1\|1642351_1643233_+	5'-3' exoribonuclease	NA	NA	NA	NA
WP_001295575.1\|1643229_1643850_+	threonylcarbamoyl-AMP synthase	NA	NA	NA	NA
WP_022581766.1\|1643877_1645773_+	DUF2207 domain-containing protein	NA	NA	NA	NA
WP_001291215.1\|1645985_1646861_+	23S rRNA pseudouridine(2605) synthase RluB	NA	NA	NA	NA
WP_001278904.1\|1646900_1647491_-	cob(I)yrinic acid a,c-diamide adenosyltransferase	NA	NA	NA	NA
WP_000559268.1\|1647487_1648246_-	YciK family oxidoreductase	A0A0N9R355	Chrysochromulina_ericina_virus	6.7e-07	23.9
WP_000422045.1\|1648465_1649515_+\|protease	protease SohB	A0A2H4UUF9	Bodo_saltans_virus	1.3e-21	31.5

DBSCAN-SWA_6

1733154 : 1791805

Escherichia_phage(51.52%)

tail,tRNA,head,portal,holin,terminase,transposase,capsid,integrase

attL 1732788:1732803|attR 1788628:1788643

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1732788:1732803	attL	NA	NA	NA	NA
WP_001401302.1\|1733154_1734387_-	diguanylate cyclase DgcM	A0A127AWB9	Bacillus_phage	1.8e-17	39.5
WP_000387388.1\|1734641_1735625_+	zinc transporter ZntB	NA	NA	NA	NA
WP_000123735.1\|1736102_1737476_+	ATP-dependent RNA helicase DbpA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	6.6e-53	34.4
WP_001157377.1\|1737604_1738540_-\|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	A0A0U2S5Z2	Escherichia_phage	2.8e-148	100.0
WP_000040838.1\|1738592_1739828_-\|integrase	site-specific integrase	A0A0U2JGI6	Escherichia_phage	1.1e-240	99.3
WP_000079604.1\|1739829_1740045_-	excisionase XisR	A0A0U2RY08	Escherichia_phage	1.8e-37	100.0
WP_001298826.1\|1740144_1740333_-	DUF1187 family protein	A0A0U2QL97	Escherichia_phage	5.5e-27	98.4
WP_021500490.1\|1740325_1740520_-	type I toxin-antitoxin system endodeoxyribonuclease toxin RalR	A0A0U2QQP4	Escherichia_phage	9.0e-33	100.0
WP_001004423.1\|1740583_1741636_-	recombinase RecT	A0A0U2S5Y9	Escherichia_phage	1.4e-116	63.3
WP_025404324.1\|1741647_1744773_-	exodeoxyribonuclease VIII	A0A0U2I1R6	Escherichia_phage	0.0e+00	82.7
WP_001519830.1\|1744874_1745150_-	phage protein	A0A0U2QW85	Escherichia_phage	4.9e-40	92.3
WP_000245528.1\|1745224_1745401_-	hypothetical protein	A0A0U2SHB5	Escherichia_phage	9.7e-26	93.1
WP_000560227.1\|1745394_1745616_-	cell division protein FtsZ	A0A0U2RTC4	Escherichia_phage	1.2e-36	95.9
WP_032102321.1\|1746211_1746394_+	hypothetical protein	NA	NA	NA	NA
WP_025404325.1\|1746394_1747033_-	hypothetical protein	A0A2R2Z306	Escherichia_phage	8.8e-08	43.0
WP_000379546.1\|1747044_1747197_-	DUF1391 family protein	M4QQ57	Salicola_phage	1.3e-07	53.2
WP_000410105.1\|1747502_1747922_-	helix-turn-helix domain-containing protein	K7PH71	Enterobacterial_phage	3.1e-14	60.6
WP_001033914.1\|1748018_1748261_+	helix-turn-helix transcriptional regulator	K7PKH4	Enterobacteria_phage	2.3e-17	62.1
WP_000702023.1\|1748257_1748680_+	hypothetical protein	A0A0U2RXZ9	Escherichia_phage	5.3e-70	95.0
WP_000899742.1\|1748692_1749562_+	DUF1376 domain-containing protein	A0A0U2RT81	Escherichia_phage	2.2e-78	94.3
WP_025404326.1\|1749568_1750315_+	ATP-binding protein	V5UQI5	Shigella_phage	1.8e-113	80.5
WP_025404327.1\|1750336_1751107_+	DUF1627 domain-containing protein	A0A0U2SAW4	Escherichia_phage	6.3e-85	67.2
WP_001118155.1\|1751122_1751518_+	DUF977 family protein	A0A0U2QQN3	Escherichia_phage	1.0e-30	51.4
WP_000761449.1\|1751518_1751932_+	hypothetical protein	A0A2R2Z307	Escherichia_phage	6.6e-57	95.8
WP_000063625.1\|1751980_1752193_+	hypothetical protein	A0A2R2Z310	Escherichia_phage	1.4e-31	87.1
WP_029594466.1\|1752256_1752601_+	hypothetical protein	A0A0N7KZJ2	Stx2-converting_phage	2.0e-46	93.5
WP_000610382.1\|1752597_1752951_+	DUF551 domain-containing protein	Q9EY98	Enterobacteria_phage	3.2e-36	65.8
WP_001278450.1\|1753066_1753171_+	hypothetical protein	NA	NA	NA	NA
WP_000967410.1\|1753359_1753572_+	type I toxin-antitoxin system Hok family toxin	A0A0P0ZAX5	Stx2-converting_phage	2.8e-27	97.1
WP_071525388.1\|1753808_1754060_+	hypothetical protein	NA	NA	NA	NA
WP_000940348.1\|1754131_1754731_+	DUF1367 family protein	A0A0U2RT94	Escherichia_phage	1.6e-104	91.0
WP_000228019.1\|1754730_1755021_+	DUF1364 domain-containing protein	A0A0U2KD41	Escherichia_phage	5.7e-47	88.5
WP_000640148.1\|1755017_1755572_+	DUF1133 family protein	A0A0U2S606	Escherichia_phage	7.5e-72	71.6
WP_000211416.1\|1755845_1756427_+	ORF6N domain-containing protein	Q8VNP5	Enterobacteria_phage	8.7e-63	97.6
WP_000917763.1\|1756670_1756868_+	hypothetical protein	S5MQK8	Escherichia_phage	8.9e-28	96.9
WP_000301789.1\|1757002_1757716_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_000466957.1\|1758166_1758598_+	tellurite resistance TerB family protein	H6WZJ6	Escherichia_phage	3.3e-67	97.2
WP_024247920.1\|1759169_1761020_+	SASA family carbohydrate esterase	B6DZ89	Enterobacteria_phage	0.0e+00	99.4
WP_000411802.1\|1761464_1761671_+\|holin	holin	A0A0P0ZC45	Stx2-converting_phage	2.4e-31	100.0
WP_000731241.1\|1761675_1762020_+	YdfR family protein	A0A0P0ZD64	Stx2-converting_phage	1.7e-58	99.1
WP_000992148.1\|1762070_1762604_+	lysozyme	B6DZ92	Enterobacteria_phage	3.0e-102	99.4
WP_001056806.1\|1762874_1763444_+	hypothetical protein	A0A1I9LJR6	Stx_converting_phage	3.1e-105	100.0
WP_000539795.1\|1763443_1763590_+	hypothetical protein	A0A0P0ZG36	Escherichia_phage	1.1e-11	87.0
WP_001208680.1\|1763812_1763998_+	membrane protein	A0A1U9AJA4	Stx1_converting_phage	1.7e-20	80.3
WP_001302717.1\|1764523_1764838_+	PerC family transcriptional regulator	NA	NA	NA	NA
WP_001303940.1\|1764919_1765144_-	YlcI/YnfO family protein	A0A0K2FIR8	Escherichia_phage	1.7e-19	90.6
WP_000453587.1\|1765532_1766078_+	DNA-packaging protein	A0A0K2FIG2	Enterobacteria_phage	1.4e-94	98.9
WP_001027330.1\|1766052_1767978_+\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	0.0e+00	99.1
WP_000198153.1\|1767974_1768181_+\|head,tail	head-tail joining protein	A0A2R9YJL2	Escherichia_phage	2.2e-29	98.5
WP_001443752.1\|1768177_1769779_+\|portal	phage portal protein	A0A0K2FJC0	Enterobacteria_phage	3.6e-308	98.7
WP_025404328.1\|1769759_1771079_+	S49 family peptidase	A0A2I6TC87	Escherichia_phage	1.7e-231	97.9
WP_001295978.1\|1771088_1771421_+\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	3.8e-55	99.1
WP_000063258.1\|1771476_1772502_+\|capsid	major capsid protein	A0A2I6TCE5	Escherichia_phage	5.1e-191	98.8
WP_000158897.1\|1772543_1772939_+	DNA-packaging protein FI	A0A2R9YJP4	Escherichia_phage	2.4e-56	93.9
WP_000752994.1\|1772950_1773304_+\|tail	tail attachment protein	A0A2R9YJJ5	Escherichia_phage	9.0e-63	100.0
WP_000975099.1\|1773315_1773894_+\|tail	phage tail protein	A0A2R9YJK4	Escherichia_phage	1.3e-79	99.0
WP_000683138.1\|1773890_1774286_+\|tail	tail protein	A0A0K2FIF4	Enterobacteria_phage	5.0e-70	99.2
WP_001342267.1\|1774293_1775034_+\|tail	phage tail protein	A0A0K2FJ05	Enterobacteria_phage	1.0e-129	98.0
WP_000479169.1\|1775049_1775472_+\|tail	phage minor tail protein G	A0A0K2FIQ8	Enterobacteria_phage	3.1e-70	96.4
WP_000459457.1\|1775453_1775888_+\|tail	phage tail assembly protein T	A0A0K2FJB3	Enterobacteria_phage	6.9e-65	100.0
WP_025404251.1\|1775880_1778460_+\|tail	phage tail tape measure protein	A0A2R9YJM8	Escherichia_phage	0.0e+00	97.4
WP_000847347.1\|1778456_1778786_+\|tail	phage tail protein	A0A0K2FIE9	Enterobacteria_phage	3.6e-58	99.1
WP_001152619.1\|1778785_1779484_+\|tail	phage minor tail protein L	A0A0K2FJ01	Enterobacteria_phage	7.3e-133	99.1
WP_000194780.1\|1779489_1780233_+\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	2.5e-147	96.8
WP_000090891.1\|1780169_1780802_+\|tail	tail assembly protein	A0A2R9YJH6	Escherichia_phage	2.2e-96	99.5
WP_001585354.1\|1784429_1785029_+	Ail/Lom family outer membrane beta-barrel protein	A0A0P0ZCF6	Stx2-converting_phage	5.2e-111	99.5
WP_025404329.1\|1785093_1786407_+\|tail	tail fiber protein	A0A0P0ZD68	Stx2-converting_phage	7.4e-78	98.9
WP_001023407.1\|1786408_1786678_+\|tail	phage tail protein	H6WZN0	Escherichia_phage	1.4e-44	98.9
WP_016241229.1\|1787045_1787360_-	DinI-like family protein	Q687E4	Enterobacteria_phage	2.4e-27	83.3
WP_085961182.1\|1787762_1788976_-\|transposase	IS3-like element IS629 family transposase	Q6H9S3	Enterobacteria_phage	4.9e-169	99.7
1788628:1788643	attR	NA	NA	NA	NA
WP_000527802.1\|1790105_1791566_+	mannitol dehydrogenase family protein	G8DCZ3	Micromonas_pusilla_virus	5.1e-43	29.7
WP_000214712.1\|1791601_1791805_-	putative selenium delivery protein YdfZ	J9Q802	Salmonella_phage	1.6e-11	55.2

DBSCAN-SWA_7

1983155 : 2038352

Enterobacteria_phage(36.73%)

tail,portal,holin,terminase,transposase,integrase

attL 2008999:2009016|attR 2045032:2045049

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001023435.1\|1983155_1983425_-\|tail	phage tail protein	Q9EYE9	Enterobacteria_phage	2.4e-44	97.8
WP_025404333.1\|1983426_1984740_-\|tail	tail fiber protein	A0A0P0ZD68	Stx2-converting_phage	8.8e-79	99.1
WP_038426836.1\|1984804_1985407_-	Ail/Lom family outer membrane beta-barrel protein	A0A0P0ZBV0	Stx2-converting_phage	2.4e-108	98.5
WP_141069701.1\|1989285_1989915_-\|tail	tail assembly protein	B6ETG3	Enterobacteria_phage	2.1e-102	98.6
WP_000194729.1\|1989860_1990604_-\|tail	phage tail protein	Q6H9T4	Enterobacteria_phage	8.9e-145	96.4
WP_025404337.1\|1990614_1991313_-\|tail	phage minor tail protein L	A0A0P0ZD44	Stx2-converting_phage	1.1e-131	98.3
WP_000847298.1\|1991312_1991642_-\|tail	phage tail protein	Q687F2	Enterobacteria_phage	4.3e-59	100.0
WP_000081788.1\|1991638_1994251_-\|tail	phage tail tape measure protein	Q687F3	Enterobacteria_phage	0.0e+00	96.1
WP_000533440.1\|1994231_1994645_-\|tail	phage tail assembly protein T	Q687F4	Enterobacteria_phage	3.2e-43	83.2
WP_000479051.1\|1994671_1995094_-\|tail	phage minor tail protein G	Q687F5	Enterobacteria_phage	2.4e-70	97.9
WP_000235090.1\|1995107_1995860_-\|tail	phage tail protein	Q687F6	Enterobacteria_phage	5.8e-136	100.0
WP_000682716.1\|1995867_1996266_-\|tail	tail protein	Q9EYD7	Enterobacteria_phage	5.9e-71	100.0
WP_000974966.1\|1996278_1996902_-	hypothetical protein	Q9EYD6	Enterobacteria_phage	6.6e-101	100.0
WP_001281350.1\|1996904_1997186_-	DNA breaking-rejoining protein	Q8VNN4	Enterobacteria_phage	3.9e-45	97.8
WP_001097065.1\|1997178_1997505_-	DUF2190 family protein	Q9EYD5	Enterobacteria_phage	6.1e-50	100.0
WP_000974567.1\|1999560_2001063_-\|portal	phage portal protein	Q8VNN6	Enterobacteria_phage	1.2e-289	99.8
WP_000102415.1\|2001062_2001275_-	hypothetical protein	S5MBY8	Escherichia_phage	3.0e-29	98.6
WP_001077625.1\|2001271_2003395_-\|terminase	phage terminase large subunit family protein	Q9EYD1	Enterobacteria_phage	0.0e+00	100.0
WP_000373407.1\|2003391_2003868_-	DUF1441 family protein	Q8VNN8	Enterobacteria_phage	3.3e-84	100.0
WP_012816791.1\|2004342_2004528_-	membrane protein	A0A0P0ZCT3	Stx2-converting_phage	1.2e-18	100.0
WP_001092872.1\|2005046_2005580_-	lysozyme	Q08J98	Stx2-converting_phage	6.2e-100	96.0
WP_001041949.1\|2006091_2006883_-	DUF1327 domain-containing protein	Q08JA0	Stx2-converting_phage	5.7e-33	85.5
WP_000284518.1\|2006886_2007102_-\|holin	holin	Q6H9V8	Enterobacteria_phage	2.0e-33	100.0
WP_001290230.1\|2007179_2007425_-	DUF826 domain-containing protein	A0A0P0ZGR2	Escherichia_phage	8.8e-17	100.0
WP_000143458.1\|2007465_2007645_-	DUF1378 family protein	A0A2R2Z345	Escherichia_phage	2.2e-25	100.0
WP_025404338.1\|2007782_2009729_-	DUF1737 domain-containing protein	A0A075M342	Escherichia_Stx1-converting_recombinant_phage	0.0e+00	98.1
2008999:2009016	attL	NA	NA	NA	NA
WP_000024315.1\|2010232_2011291_-	site-specific DNA-methyltransferase	A0A0N7KZF8	Stx2-converting_phage	1.8e-207	99.1
WP_000917756.1\|2011441_2011639_-	hypothetical protein	S5MQK8	Escherichia_phage	6.8e-28	98.5
WP_001204809.1\|2011854_2012235_-	antitermination protein Q	S5M7R9	Escherichia_phage	1.4e-66	99.2
WP_025404339.1\|2012253_2013303_-	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	1.4e-116	58.2
WP_000191872.1\|2013304_2013577_-	hypothetical protein	S4TNP0	Salmonella_phage	1.1e-12	53.0
WP_000756596.1\|2013698_2014043_-	YgiW/YdeI family stress tolerance OB fold protein	A0A1I9LJU6	Stx_converting_phage	6.1e-56	99.1
WP_000967410.1\|2014162_2014375_-	type I toxin-antitoxin system Hok family toxin	A0A0P0ZAX5	Stx2-converting_phage	2.8e-27	97.1
WP_000373318.1\|2014728_2015523_+	protein kinase	A0A1S5V1U4	Saudi_moumouvirus	7.3e-12	29.7
WP_000789359.1\|2015506_2016223_+	hypothetical protein	NA	NA	NA	NA
WP_000761428.1\|2016750_2017164_-	hypothetical protein	A0A2R2Z307	Escherichia_phage	1.6e-58	99.2
WP_001118156.1\|2017179_2017560_-	DUF977 family protein	A0A0U2QQN3	Escherichia_phage	4.1e-29	51.5
WP_000450846.1\|2017575_2018346_-	DUF1627 domain-containing protein	A0A0U2SAW4	Escherichia_phage	1.4e-84	66.4
WP_000139445.1\|2018379_2018841_-	hypothetical protein	A0A0U2JGJ0	Escherichia_phage	1.7e-82	94.1
WP_001435286.1\|2018833_2019871_-	hypothetical protein	A0A0U2RT81	Escherichia_phage	5.8e-86	69.1
WP_000693921.1\|2019939_2020365_-	Rha family transcriptional regulator	NA	NA	NA	NA
WP_001261756.1\|2020361_2020589_-	cell division protein	NA	NA	NA	NA
WP_000444611.1\|2020688_2021333_+	LexA family transcriptional regulator	A0A1P8DTH0	Proteus_phage	6.1e-09	25.9
WP_000380316.1\|2021606_2021759_+	DUF1391 family protein	M4QQ57	Salicola_phage	5.1e-07	53.2
WP_000394548.1\|2021770_2022409_+	hypothetical protein	A0A2R2Z306	Escherichia_phage	2.5e-07	41.9
WP_001133037.1\|2022409_2022619_-	hypothetical protein	NA	NA	NA	NA
WP_000413705.1\|2023185_2023374_+	cell division inhibition protein DicB	NA	NA	NA	NA
WP_001098307.1\|2023370_2023562_+	DUF1482 family protein	NA	NA	NA	NA
WP_025404340.1\|2023655_2026127_+	exonuclease	A0A192Y6E0	Salmonella_phage	3.2e-58	58.0
WP_001368608.1\|2026211_2026448_+	excisionase family protein	S4TND0	Salmonella_phage	6.1e-15	50.7
WP_001206148.1\|2026467_2027763_+\|integrase	site-specific integrase	B6DZ48	Enterobacteria_phage	2.5e-155	62.3
WP_072095801.1\|2027782_2027893_-	transporter	NA	NA	NA	NA
WP_000836060.1\|2027950_2028970_-	Zn-dependent oxidoreductase	E3SJ82	Synechococcus_phage	1.0e-18	26.7
WP_001295394.1\|2028981_2030196_-	starvation-sensing protein RspA	Q6A202	Oenococcus_phage	1.4e-46	29.0
WP_000705197.1\|2030862_2031204_+	DUF1283 family protein	NA	NA	NA	NA
WP_001138582.1\|2031238_2031799_+	spermidine N1-acetyltransferase	NA	NA	NA	NA
WP_001321287.1\|2031801_2032512_-	YnfC family lipoprotein	NA	NA	NA	NA
WP_001295396.1\|2032619_2032925_+	DUF1161 domain-containing protein	NA	NA	NA	NA
WP_072095802.1\|2035612_2037136_+	molybdopterin-dependent oxidoreductase	A0A077SK27	Escherichia_phage	7.4e-130	50.7
WP_085961182.1\|2037138_2038352_-\|transposase	IS3-like element IS629 family transposase	Q6H9S3	Enterobacteria_phage	4.9e-169	99.7
2045032:2045049	attR	NA	NA	NA	NA

DBSCAN-SWA_8

2327129 : 2408054

Enterobacteria_phage(71.05%)

tail,tRNA,head,portal,holin,transposase,terminase,plate,capsid

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001258668.1\|2327129_2328902_-\|tRNA	aspartate--tRNA ligase	NA	NA	NA	NA
WP_000891626.1\|2329211_2329778_+	hydrolase	NA	NA	NA	NA
WP_000639274.1\|2329774_2330593_+	DUF72 domain-containing protein	Q859D1	Escherichia_coli_phage	6.5e-72	99.2
WP_000252980.1\|2330645_2331041_+	hypothetical protein	NA	NA	NA	NA
WP_000019617.1\|2331081_2331825_+	carboxy-S-adenosyl-L-methionine synthase CmoA	F5B419	Synechococcus_phage	3.5e-24	30.0
WP_000564736.1\|2331821_2332793_+\|tRNA	tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB	NA	NA	NA	NA
WP_000176856.1\|2332957_2335387_-	trimethylamine N-oxide reductase TorZ	NA	NA	NA	NA
WP_001214304.1\|2335411_2336512_-	cytochrome c	NA	NA	NA	NA
WP_001185723.1\|2336899_2337646_-	copper homeostasis protein CutC	NA	NA	NA	NA
WP_001295504.1\|2337659_2338226_-	VOC family protein	NA	NA	NA	NA
WP_001025326.1\|2338441_2340175_+\|tRNA	arginine--tRNA ligase	A0A2K9L6Z2	Tupanvirus	8.8e-87	33.7
WP_001307852.1\|2340351_2340840_+	lysozyme inhibitor LprI family protein	NA	NA	NA	NA
WP_001259594.1\|2340961_2341354_-	flagellar protein FlhE	NA	NA	NA	NA
WP_000066966.1\|2341353_2343432_-	flagellar biosynthesis protein FlhA	NA	NA	NA	NA
WP_001278936.1\|2343424_2344573_-	flagellar type III secretion system protein FlhB	NA	NA	NA	NA
WP_000983609.1\|2344774_2345419_-	protein phosphatase CheZ	NA	NA	NA	NA
WP_000763865.1\|2345429_2345819_-	chemotaxis protein CheY	A0A2K9L4R0	Tupanvirus	1.3e-06	32.0
WP_000036371.1\|2345833_2346883_-	protein-glutamate methylesterase/protein glutamine deamidase	Q56AR1	Bacillus_thuringiensis_phage	1.0e-05	32.8
WP_000204337.1\|2346885_2347746_-	protein-glutamate O-methyltransferase CheR	NA	NA	NA	NA
WP_001297437.1\|2349411_2351073_-	methyl-accepting chemotaxis protein II	A0A2H4J162	uncultured_Caudovirales_phage	1.7e-10	40.3
WP_000147302.1\|2351217_2351721_-	chemotaxis protein CheW	NA	NA	NA	NA
WP_001406772.1\|2351741_2353706_-	chemotaxis protein CheA	NA	NA	NA	NA
WP_000795622.1\|2353710_2354637_-	flagellar motor protein MotB	NA	NA	NA	NA
WP_000906336.1\|2354633_2355521_-	flagellar motor stator protein MotA	NA	NA	NA	NA
WP_001291603.1\|2355647_2356226_-	flagellar transcriptional regulator FlhC	NA	NA	NA	NA
WP_001295647.1\|2356228_2356579_-	flagellar transcriptional regulator FlhD	NA	NA	NA	NA
WP_000122432.1\|2357359_2357788_+	universal stress protein UspC	NA	NA	NA	NA
WP_001295646.1\|2357794_2359219_-	alpha,alpha-trehalose-phosphate synthase	NA	NA	NA	NA
WP_001302045.1\|2359193_2359994_-	trehalose-phosphatase	NA	NA	NA	NA
WP_000987895.1\|2360160_2361150_-	arabinose ABC transporter permease AraH	NA	NA	NA	NA
WP_001187819.1\|2361161_2362676_-	arabinose ABC transporter ATP binding protein AraG	A0A2H4PQG7	Staphylococcus_phage	4.3e-13	27.1
WP_000548675.1\|2362745_2363735_-	arabinose ABC transporter substrate-binding protein AraF	NA	NA	NA	NA
WP_000179469.1\|2364531_2365035_+	non-heme ferritin-like protein	NA	NA	NA	NA
WP_000082127.1\|2365113_2365365_-	DUF2766 domain-containing protein	NA	NA	NA	NA
WP_010723106.1\|2365480_2365567_-	stress response protein AzuC	NA	NA	NA	NA
WP_024262403.1\|2365829_2366153_+	hypothetical protein	NA	NA	NA	NA
WP_001400592.1\|2366323_2366821_+	non-heme ferritin	NA	NA	NA	NA
WP_000377223.1\|2366858_2367098_-	YecH family protein	NA	NA	NA	NA
WP_000797567.1\|2367289_2368501_+	tyrosine transporter TyrP	NA	NA	NA	NA
WP_000847882.1\|2368562_2369228_-	UPF0149 family protein YecA	NA	NA	NA	NA
WP_000687352.1\|2369826_2371698_-	DUF262 domain-containing protein	NA	NA	NA	NA
WP_000465340.1\|2371755_2372265_-	hypothetical protein	NA	NA	NA	NA
WP_001290574.1\|2372316_2373072_-	M48 family metallopeptidase	NA	NA	NA	NA
WP_032212789.1\|2373471_2374326_-\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	1.2e-68	45.4
WP_000088336.1\|2374339_2374627_-\|transposase	transposase	NA	NA	NA	NA
WP_000290304.1\|2377688_2379473_-	cold shock domain-containing protein	NA	NA	NA	NA
WP_000779012.1\|2379495_2380179_-	YecA family protein	NA	NA	NA	NA
WP_101892112.1\|2380175_2381333_-	restriction endonuclease subunit S	NA	NA	NA	NA
WP_085961182.1\|2382749_2383962_+\|transposase	IS3-like element IS629 family transposase	Q6H9S3	Enterobacteria_phage	4.9e-169	99.7
WP_000087810.1\|2384707_2385754_-\|portal	phage portal protein	A0A0A7NPT9	Enterobacteria_phage	5.7e-206	99.7
WP_000613782.1\|2385753_2387505_-\|terminase	terminase	A0A0A7NV54	Enterobacteria_phage	0.0e+00	97.8
WP_001262654.1\|2387659_2388496_+\|capsid	phage capsid scaffolding protein	A0A0A7NRY7	Enterobacteria_phage	7.9e-150	99.3
WP_001055089.1\|2388519_2389572_+\|capsid	phage major capsid protein, P2 family	A0A0A7NQ82	Enterobacteria_phage	6.6e-194	97.1
WP_000632336.1\|2389617_2390418_+\|terminase	terminase	A0A0A7NPX9	Enterobacteria_phage	1.5e-129	91.4
WP_000178988.1\|2390521_2391016_+\|head	head completion/stabilization protein	A0A0A7NPU2	Enterobacteria_phage	9.2e-90	99.4
WP_000864901.1\|2391015_2391216_+\|tail	tail protein	A0A0A7NV57	Enterobacteria_phage	3.5e-32	100.0
WP_000104350.1\|2391218_2391542_+\|holin	holin	A0A0A7NRY9	Enterobacteria_phage	1.6e-50	99.1
WP_000072327.1\|2391538_2391931_+	M15 family metallopeptidase	A0A0A7NQ86	Enterobacteria_phage	5.8e-71	100.0
WP_000780563.1\|2391927_2392335_+	DUF2570 domain-containing protein	A0A0A7NPY2	Enterobacteria_phage	1.3e-65	97.8
WP_000920594.1\|2392472_2392940_+\|tail	phage tail protein	A0A0A7NPU6	Enterobacteria_phage	2.6e-86	100.0
WP_000356339.1\|2392932_2393568_+	phage virion morphogenesis protein	A0A0A7NV60	Enterobacteria_phage	1.1e-114	100.0
WP_001271894.1\|2393564_2394146_+\|plate	phage baseplate assembly protein V	A0A0A7NRZ3	Enterobacteria_phage	1.0e-100	96.9
WP_000213447.1\|2394142_2394493_+\|plate	baseplate assembly protein	A0A0A7NQ90	Enterobacteria_phage	9.2e-60	100.0
WP_001111928.1\|2394496_2395393_+\|plate	phage baseplate assembly protein	A0A0A7NPY5	Enterobacteria_phage	1.5e-154	98.0
WP_000071720.1\|2395385_2395916_+\|tail	phage tail protein I	A0A0A7NPV1	Enterobacteria_phage	1.1e-93	99.4
WP_025404349.1\|2395918_2397904_+\|tail	phage tail protein	A0A0A7NV63	Enterobacteria_phage	2.5e-170	84.9
WP_000972142.1\|2397906_2398440_+\|tail	tail fiber assembly protein	C9DGR0	Escherichia_phage	1.4e-96	99.4
WP_001164120.1\|2398468_2398996_-\|tail	tail fiber assembly protein	A0A222YWC2	Escherichia_phage	7.3e-93	97.7
WP_032316220.1\|2398999_2399704_-	hypothetical protein	Q7Y4D4	Escherichia_virus	4.8e-124	93.2
WP_000905061.1\|2399940_2400540_+	recombinase family protein	A0A0A7NPV4	Enterobacteria_phage	3.8e-98	98.9
WP_000979945.1\|2400568_2401057_-\|tail	phage tail protein	A0A0A7NV65	Enterobacteria_phage	1.4e-85	99.4
WP_000853440.1\|2401069_2403877_-\|tail	phage tail tape measure protein	A0A0A7NRZ9	Enterobacteria_phage	0.0e+00	96.9
WP_000333503.1\|2403863_2404019_-\|tail	GpE family phage tail protein	A0A0A7NQ96	Enterobacteria_phage	9.7e-22	96.1
WP_000651580.1\|2404027_2404402_-	hypothetical protein	A0A0A7NPZ0	Enterobacteria_phage	4.0e-37	73.2
WP_000290450.1\|2404457_2404970_-\|tail	phage major tail tube protein	A0A0A7NPV8	Enterobacteria_phage	3.2e-93	100.0
WP_000005358.1\|2404969_2406154_-\|tail	phage tail sheath family protein	A0A0A7NV69	Enterobacteria_phage	9.6e-226	99.2
WP_000132788.1\|2406311_2407421_+	phage late control D family protein	A0A0A7NQ97	Enterobacteria_phage	2.8e-195	94.6
WP_000488107.1\|2407463_2407724_+	ogr/Delta-like zinc finger family protein	NA	NA	NA	NA
WP_000078920.1\|2407913_2408054_+	Hok/Gef family protein	A0A0A7NPZ4	Enterobacteria_phage	7.0e-19	100.0

DBSCAN-SWA_9

2463322 : 2524753

Enterobacteria_phage(31.48%)

tail,head,portal,holin,protease,terminase,plate,transposase,capsid,integrase

attL 2512234:2512293|attR 2540133:2540237

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_095111390.1\|2463322_2463454_-	hypothetical protein	K7PMH7	Enterobacteria_phage	1.5e-07	76.5
WP_022581903.1\|2463800_2464781_-	type III secretion system effector arginine glycosyltransferase NleB2	Q8HAB2	Salmonella_phage	9.4e-86	49.2
WP_001373820.1\|2464957_2465206_-\|tail	phage tail protein	B6DZB8	Enterobacteria_phage	4.4e-40	98.8
WP_025404350.1\|2465227_2466541_-\|tail	tail fiber protein	A0A0P0ZD68	Stx2-converting_phage	6.9e-76	97.9
WP_001360257.1\|2466605_2467229_-	Ail/Lom family outer membrane beta-barrel protein	A0A1U8QHD6	Enterobacteria_phage	1.7e-69	61.4
WP_025404351.1\|2467297_2470774_-	host specificity protein J	A0A0P0ZBW1	Stx2-converting_phage	0.0e+00	97.6
WP_000649829.1\|2470907_2471435_+	superoxide dismutase family protein	Q9MC02	Salmonella_phage	1.8e-59	60.5
WP_052915903.1\|2471625_2472258_-\|tail	tail assembly protein	A0A0P0ZC16	Stx2-converting_phage	7.1e-103	96.2
WP_025404352.1\|2472203_2472947_-\|tail	phage tail protein	A0A0P0ZE89	Stx2-converting_phage	5.9e-149	98.0
WP_001357740.1\|2472952_2473651_-\|tail	phage minor tail protein L	A0A0P0ZBE3	Stx2-converting_phage	8.1e-132	98.7
WP_025404276.1\|2473650_2473980_-\|tail	phage tail protein	Q687F2	Enterobacteria_phage	2.2e-55	94.5
WP_025404353.1\|2473976_2476556_-\|tail	phage tail tape measure protein	A0A2R9YJM8	Escherichia_phage	0.0e+00	82.0
WP_000533423.1\|2476536_2476950_-\|tail	phage tail assembly protein T	S5MDP5	Escherichia_phage	2.7e-42	82.2
WP_000479105.1\|2476976_2477408_-\|tail	phage minor tail protein G	A0A0K2FIQ8	Enterobacteria_phage	3.7e-42	68.8
WP_001357739.1\|2477421_2478174_-\|tail	phage tail protein	Q687F6	Enterobacteria_phage	1.6e-133	98.0
WP_000683066.1\|2478181_2478577_-\|tail	tail protein	A0A2R9YJI2	Escherichia_phage	3.9e-59	83.2
WP_000975046.1\|2478573_2479107_-\|tail	phage tail protein	A0A2R9YJK4	Escherichia_phage	2.2e-57	65.1
WP_001204549.1\|2479122_2479476_-\|tail	tail attachment protein	A0A0K2FJB7	Enterobacteria_phage	8.7e-42	70.1
WP_000201523.1\|2479468_2479843_-	hypothetical protein	NA	NA	NA	NA
WP_000522615.1\|2479894_2480923_-\|capsid	major capsid protein	C6ZCY2	Enterobacteria_phage	3.9e-114	60.7
WP_000256809.1\|2480980_2481328_-\|head	head decoration protein	C6ZCY1	Enterobacteria_phage	2.6e-22	58.1
WP_025380298.1\|2481364_2482870_-	S49 family peptidase	A0A2I6TC87	Escherichia_phage	3.6e-100	54.2
WP_000831765.1\|2482859_2484452_-\|portal	phage portal protein	K7P6U7	Enterobacteria_phage	3.2e-184	60.9
WP_000259002.1\|2484448_2484655_-\|head,tail	head-tail joining protein	K7PM10	Enterobacteria_phage	7.9e-11	56.9
WP_025404272.1\|2484638_2486567_-\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	1.8e-261	65.9
WP_000235436.1\|2486538_2487048_-\|terminase	terminase	A0A1I9KFT4	Aeromonas_phage	1.6e-12	32.7
WP_001300236.1\|2487449_2487674_+	DUF3950 domain-containing protein	A0A0K2FIR8	Escherichia_phage	2.9e-19	88.7
WP_001303878.1\|2487755_2488070_-	PerC family transcriptional regulator	NA	NA	NA	NA
WP_012816791.1\|2488597_2488783_-	membrane protein	A0A0P0ZCT3	Stx2-converting_phage	1.2e-18	100.0
WP_032162009.1\|2489334_2489868_-	lysozyme	B6DZ92	Enterobacteria_phage	2.1e-100	97.2
WP_000138558.1\|2490027_2490300_+	hypothetical protein	NA	NA	NA	NA
WP_000411814.1\|2490555_2490762_-\|holin	holin	Q6H9V8	Enterobacteria_phage	5.3e-31	98.5
WP_000874348.1\|2491210_2493061_-	SASA family carbohydrate esterase	B6DZ89	Enterobacteria_phage	0.0e+00	96.3
WP_000261909.1\|2493828_2494542_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_000917737.1\|2494679_2494877_-	hypothetical protein	S5MQK8	Escherichia_phage	2.6e-27	96.9
WP_000265267.1\|2495163_2495982_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_148294920.1\|2496133_2496505_-	antitermination protein	Q777W5	Enterobacteria_phage	4.0e-53	83.9
WP_001217447.1\|2496507_2496867_-	RusA family crossover junction endodeoxyribonuclease	V5URS4	Shigella_phage	5.0e-37	63.5
WP_001265233.1\|2496879_2497929_-	DUF968 domain-containing protein	U5P0K4	Shigella_phage	3.4e-110	54.3
WP_000191872.1\|2497930_2498203_-	hypothetical protein	S4TNP0	Salmonella_phage	1.1e-12	53.0
WP_000756596.1\|2498324_2498669_-	YgiW/YdeI family stress tolerance OB fold protein	A0A1I9LJU6	Stx_converting_phage	6.1e-56	99.1
WP_000935259.1\|2498788_2499001_-	type I toxin-antitoxin system Hok family toxin	A0A0P0ZAX5	Stx2-converting_phage	6.0e-30	100.0
WP_000104474.1\|2499234_2499792_-	DUF551 domain-containing protein	A0A0N7KZV3	Escherichia_phage	2.8e-34	41.7
WP_000683609.1\|2499793_2500012_-	DUF4014 family protein	A0A2R2Z311	Escherichia_phage	2.3e-21	72.2
WP_000034815.1\|2500139_2500451_-	hypothetical protein	A0A0U2QV73	Escherichia_phage	1.6e-55	91.3
WP_000699809.1\|2500443_2500671_-	hypothetical protein	A0A1B5FPG2	Escherichia_phage	5.1e-11	49.3
WP_042353845.1\|2500667_2500949_-	DNA-binding protein	A0A222YXX1	Escherichia_phage	3.9e-29	72.5
WP_000450617.1\|2500981_2501698_-	DUF1627 domain-containing protein	A0A0U2SAW4	Escherichia_phage	2.1e-71	62.6
WP_000788760.1\|2501719_2502466_-	ATP-binding protein	A0A088CBP4	Shigella_phage	3.6e-114	83.2
WP_025404357.1\|2502472_2503567_-	hypothetical protein	A0A088CD36	Shigella_phage	1.7e-64	65.7
WP_000693858.1\|2503638_2504064_-	hypothetical protein	NA	NA	NA	NA
WP_000747948.1\|2504047_2504290_-	hypothetical protein	H9C161	Pectobacterium_phage	4.8e-07	55.8
WP_001416688.1\|2504681_2505020_+	peptidase S24	H9C160	Pectobacterium_phage	1.9e-06	30.1
WP_001345283.1\|2505312_2505465_+	DUF1391 family protein	M4QQ57	Salicola_phage	1.7e-07	53.2
WP_000394548.1\|2505476_2506115_+	hypothetical protein	A0A2R2Z306	Escherichia_phage	2.5e-07	41.9
WP_001133037.1\|2506115_2506325_-	hypothetical protein	NA	NA	NA	NA
WP_000449192.1\|2506895_2507084_+	cell division inhibition protein DicB	NA	NA	NA	NA
WP_001090200.1\|2507080_2507272_+	DUF1482 family protein	NA	NA	NA	NA
WP_000096346.1\|2509895_2510099_+	DUF4224 domain-containing protein	NA	NA	NA	NA
WP_000533625.1\|2510098_2511124_+\|integrase	tyrosine-type recombinase/integrase	A0A192Y7M7	Salmonella_phage	4.0e-103	58.2
WP_001302302.1\|2511359_2512157_+	DgsA anti-repressor MtfA	NA	NA	NA	NA
2512234:2512293	attL	NA	NA	NA	NA
WP_000055685.1\|2512494_2513757_+\|integrase	integrase arm-type DNA-binding domain-containing protein	B7SYF8	Stenotrophomonas_phage	3.8e-71	40.3
WP_157832604.1\|2516178_2516319_+	hypothetical protein	NA	NA	NA	NA
WP_001242259.1\|2516748_2517021_-	HigA family addiction module antidote protein	NA	NA	NA	NA
WP_000983666.1\|2517171_2517426_-	transcriptional regulator	A0A2I7S995	Vibrio_phage	1.0e-12	56.7
WP_000235844.1\|2517422_2517884_-	hypothetical protein	NA	NA	NA	NA
WP_022581241.1\|2518219_2519281_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_022581240.1\|2519244_2521104_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_025404358.1\|2521408_2523535_+	type VI secretion system tip protein VgrG	A0A077K8Q4	Ralstonia_phage	2.2e-23	23.1
WP_113706114.1\|2523540_2524753_+\|transposase	IS3-like element IS629 family transposase	Q6H9S3	Enterobacteria_phage	1.4e-168	99.3
2540133:2540237	attR	NA	NA	NA	NA

DBSCAN-SWA_10

2563817 : 2610389

Salmonella_phage(36.23%)

tail,holin,transposase,capsid,integrase

attL 2587558:2587572|attR 2612333:2612347

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001320295.1\|2563817_2564984_-	serine-type D-Ala-D-Ala carboxypeptidase DacD	B6DZZ7	Stx2-converting_phage	5.5e-226	98.7
WP_025404365.1\|2565571_2566165_-\|tail	phage tail protein	M1SV83	Escherichia_phage	1.6e-59	64.3
WP_025404366.1\|2566164_2566959_-	hypothetical protein	K7PH60	Enterobacterial_phage	1.7e-69	81.4
WP_000049950.1\|2566958_2567639_-	DUF2612 domain-containing protein	A0A0M5M1K4	Salmonella_phage	2.6e-103	78.8
WP_025404367.1\|2567635_2568835_-	hypothetical protein	A0A0M4RD32	Salmonella_phage	7.5e-186	83.9
WP_001270637.1\|2568834_2569188_-	hypothetical protein	A0A0M4R339	Salmonella_phage	6.9e-55	89.7
WP_024233996.1\|2569187_2569943_-	hypothetical protein	A0A0M5M1K7	Salmonella_phage	2.8e-114	87.3
WP_000466689.1\|2570002_2570242_-	DUF4282 domain-containing protein	A0A077KGV8	Edwardsiella_phage	5.6e-08	47.5
WP_032162015.1\|2570295_2570637_-	hypothetical protein	A0A0M4RTY3	Salmonella_phage	2.5e-33	84.4
WP_025404368.1\|2570640_2571702_-	hypothetical protein	A0A0M4QX01	Salmonella_phage	2.0e-158	80.3
WP_016233440.1\|2571704_2572007_-	hypothetical protein	A0A0M4R5B7	Salmonella_phage	2.4e-48	90.0
WP_001420197.1\|2572006_2572594_-	hypothetical protein	A0A0M3ULD5	Salmonella_phage	6.9e-84	88.5
WP_025404369.1\|2572593_2574582_-	hypothetical protein	A0A0M4REK7	Salmonella_phage	4.0e-269	74.2
WP_023565715.1\|2574759_2575212_-	hypothetical protein	A0A0M4S6U8	Salmonella_phage	4.7e-56	72.7
WP_000109255.1\|2575215_2575656_-	DUF3277 family protein	A0A2H4J619	uncultured_Caudovirales_phage	1.6e-56	74.7
WP_000046924.1\|2575666_2576812_-	DUF3383 domain-containing protein	A0A2H4J8G4	uncultured_Caudovirales_phage	1.8e-160	73.8
WP_032162013.1\|2576815_2577379_-	hypothetical protein	A0A0M4R331	Salmonella_phage	7.6e-80	75.7
WP_023908474.1\|2577353_2577743_-	hypothetical protein	A0A0M3ULK0	Salmonella_phage	1.1e-66	96.1
WP_025404371.1\|2577729_2578284_-	hypothetical protein	A0A0M4S631	Salmonella_phage	1.4e-81	85.3
WP_024183605.1\|2578280_2578688_-	DUF4054 domain-containing protein	A0A0M5M3S2	Salmonella_phage	5.1e-70	96.3
WP_025404372.1\|2578653_2579022_-	hypothetical protein	A0A0M4RTX5	Salmonella_phage	1.0e-53	89.3
WP_000627483.1\|2579062_2580004_-	DUF2184 domain-containing protein	A0A0M3ULD3	Salmonella_phage	2.9e-156	87.2
WP_025404373.1\|2580015_2580519_-	hypothetical protein	A0A0M4QWZ6	Salmonella_phage	8.0e-73	82.0
WP_025404374.1\|2580523_2581744_-	DUF2213 domain-containing protein	A0A0M4R5A6	Salmonella_phage	1.5e-202	89.0
WP_086353604.1\|2581758_2582496_-\|capsid	minor capsid protein	A0A0M4REK0	Salmonella_phage	5.0e-108	95.0
WP_025404375.1\|2582383_2583850_-	DUF1073 domain-containing protein	A0A0M4S6U1	Salmonella_phage	3.3e-268	94.3
WP_025404376.1\|2583849_2585472_-	bacteriophage TerL protein	A0A0M5M1R6	Salmonella_phage	5.0e-310	94.8
WP_025404377.1\|2585474_2585948_-	DUF2280 domain-containing protein	H9C190	Pectobacterium_phage	3.6e-51	72.8
WP_025404378.1\|2585979_2586600_-	hypothetical protein	I6S676	Salmonella_phage	7.5e-89	73.2
WP_025404379.1\|2586656_2586842_-	hypothetical protein	NA	NA	NA	NA
WP_025404380.1\|2586985_2587378_-	DUF2570 domain-containing protein	Q8SBD9	Shigella_phage	2.8e-49	79.1
WP_025404381.1\|2587361_2587838_-	glycoside hydrolase family protein	K7P890	Enterobacteria_phage	3.0e-85	94.9
2587558:2587572	attL	NA	NA	NA	NA
WP_001570152.1\|2587821_2588145_-\|holin	phage holin, lambda family	K7PH31	Enterobacteria_phage	1.1e-51	99.1
WP_001554889.1\|2588606_2589125_-	DUF1133 family protein	Q716B8	Shigella_phage	2.0e-95	99.4
WP_025404382.1\|2589115_2589787_-	serine/threonine protein phosphatase	K7P721	Enterobacteria_phage	1.1e-130	98.6
WP_000144614.1\|2589764_2589971_-	protein ninH	Q716C0	Shigella_phage	7.3e-33	100.0
WP_000861013.1\|2589967_2590363_-	RusA family crossover junction endodeoxyribonuclease	A0A220NQY4	Salmonella_phage	4.4e-66	91.6
WP_000002248.1\|2590359_2590650_-	DUF1364 domain-containing protein	A0A220NQY2	Salmonella_phage	4.2e-50	97.9
WP_025404383.1\|2590649_2591375_-	DNA-binding protein	A0A2I6PIF5	Escherichia_phage	6.7e-129	99.2
WP_000566861.1\|2591367_2591538_-	protein ninF	K7P6X0	Enterobacteria_phage	5.5e-26	100.0
WP_001254251.1\|2591534_2591717_-	NinE family protein	Q716C5	Shigella_phage	1.3e-28	100.0
WP_032162011.1\|2591713_2592241_-	phage N-6-adenine-methyltransferase	A0A1I9LJP9	Stx_converting_phage	2.8e-100	99.4
WP_025404384.1\|2592237_2592678_-	recombination protein NinB	A5VW91	Enterobacteria_phage	2.0e-80	99.3
WP_025404385.1\|2592952_2594329_-	AAA family ATPase	A0A0P0ZC27	Stx2-converting_phage	9.7e-254	99.8
WP_001608293.1\|2594325_2595147_-	replication protein	K7PJZ3	Enterobacterial_phage	2.0e-153	99.6
WP_021544312.1\|2595329_2595608_-	transcriptional activator protein C1	K7P7A2	Enterobacteria_phage	9.0e-42	97.8
WP_000620665.1\|2595716_2595911_-	hypothetical protein	K7PLQ6	Enterobacteria_phage	1.8e-28	100.0
WP_000428318.1\|2596017_2596734_+	helix-turn-helix domain-containing protein	K7PGR7	Enterobacteria_phage	9.2e-123	100.0
WP_000233129.1\|2596752_2597121_+	hypothetical protein	K7P6G1	Enterobacteria_phage	8.5e-56	98.4
WP_085947970.1\|2597996_2599210_-\|transposase	IS3 family transposase	H6WZH1	Escherichia_phage	2.9e-169	100.0
WP_157832612.1\|2599330_2599501_+	hypothetical protein	NA	NA	NA	NA
WP_025404388.1\|2599702_2599885_+	hypothetical protein	K7PLQ2	Enterobacteria_phage	3.9e-30	96.7
WP_000972063.1\|2600119_2600254_+	hypothetical protein	K7PHK2	Enterobacteria_phage	3.1e-16	100.0
WP_025404389.1\|2600238_2600391_+	host cell division inhibitory peptide Kil	K7PKW3	Enterobacterial_phage	1.2e-19	98.0
WP_000050554.1\|2600466_2600637_+	hypothetical protein	K7PJW0	Enterobacteria_phage	3.0e-24	100.0
WP_000031370.1\|2600647_2601253_+	ERF family protein	Q9MCQ9	Enterobacteria_phage	4.1e-108	100.0
WP_025404390.1\|2601252_2601636_+	hypothetical protein	K7P7R8	Enterobacteria_phage	5.5e-66	97.6
WP_085961182.1\|2601911_2603124_+\|transposase	IS3-like element IS629 family transposase	Q6H9S3	Enterobacteria_phage	4.9e-169	99.7
WP_032162002.1\|2603276_2603441_+	DUF2737 family protein	A0A2I6PID4	Escherichia_phage	7.1e-23	98.1
WP_025404392.1\|2603437_2603899_+	hypothetical protein	A0A2P1MXC5	Escherichia_phage	3.1e-55	72.3
WP_025404393.1\|2603895_2604204_+	hypothetical protein	B1GS43	Salmonella_phage	2.7e-39	86.2
WP_025404394.1\|2604196_2604841_+	hypothetical protein	Q1MVG0	Enterobacteria_phage	2.0e-129	97.2
WP_000151165.1\|2604837_2605491_+	ead/Ea22-like family protein	A5VWB1	Enterobacteria_phage	2.3e-35	58.1
WP_001289898.1\|2605487_2606240_+	ead/Ea22-like family protein	Q1MVF9	Enterobacteria_phage	8.8e-108	89.0
WP_000797279.1\|2606585_2606774_+	hypothetical protein	A0A1I9LJM4	Stx_converting_phage	1.4e-30	98.4
WP_025404395.1\|2607287_2608001_+	DUF551 domain-containing protein	A0A2D1GLX9	Escherichia_phage	3.0e-65	60.0
WP_021549676.1\|2607997_2608258_+	hypothetical protein	A0A077SLR0	Escherichia_phage	3.5e-40	96.5
WP_032162000.1\|2608257_2608542_+	ASCH domain-containing protein	A0A2D1GLL3	Escherichia_phage	2.7e-49	97.9
WP_025404397.1\|2608614_2608959_+	hypothetical protein	K7PJY7	Enterobacterial_phage	1.7e-58	97.4
WP_000132739.1\|2609038_2609230_+	AlpA family phage regulatory protein	A0A0P0ZBL0	Stx2-converting_phage	1.7e-31	100.0
WP_025404398.1\|2609210_2610389_-\|integrase	site-specific integrase	K7P7J2	Enterobacteria_phage	1.5e-231	99.7
2612333:2612347	attR	NA	NA	NA	NA

DBSCAN-SWA_11

2696436 : 2797483

Enterobacteria_phage(33.33%)

tail,tRNA,head,holin,terminase,transposase,capsid,lysis

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000476014.1\|2696436_2697798_+\|tRNA	tRNA 5-hydroxyuridine modification protein YegQ	Q6DW11	Phage_TP	1.9e-217	99.7
WP_001318299.1\|2698128_2698446_-	hypothetical protein	NA	NA	NA	NA
WP_000807356.1\|2698851_2699751_+	lipid kinase YegS	A0A1V0SBJ0	Catovirus	1.7e-12	29.0
WP_000178552.1\|2699832_2700612_-	DeoR/GlpR transcriptional regulator	NA	NA	NA	NA
WP_000490679.1\|2701799_2703155_-	galactitol permease IIC component	NA	NA	NA	NA
WP_000823260.1\|2703158_2703443_-	PTS galactitol transporter subunit IIB	NA	NA	NA	NA
WP_000182899.1\|2703473_2703926_-	PTS galactitol transporter subunit IIA	NA	NA	NA	NA
WP_000853896.1\|2703935_2705198_-	tagatose-bisphosphate aldolase subunit GatZ	NA	NA	NA	NA
WP_001307281.1\|2705226_2706081_-	tagatose-bisphosphate aldolase subunit GatY	NA	NA	NA	NA
WP_000129551.1\|2706388_2707441_-	class I fructose-bisphosphate aldolase	NA	NA	NA	NA
WP_000858489.1\|2707697_2708975_+	MFS transporter	NA	NA	NA	NA
WP_000846214.1\|2708971_2709976_+	ADP-ribosylglycohydrolase family protein	A0A1S6UB21	Serratia_phage	2.6e-14	30.0
WP_000011993.1\|2709972_2710938_+	sugar kinase	NA	NA	NA	NA
WP_000434038.1\|2710911_2711658_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_001351783.1\|2711709_2712528_-	glycoside hydrolase family 25 protein	D0R7H8	Paenibacillus_phage	1.9e-23	38.0
WP_000822274.1\|2712592_2713393_-	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	NA	NA	NA	NA
WP_001195570.1\|2713389_2714178_-	hydroxyethylthiazole kinase	NA	NA	NA	NA
WP_000019944.1\|2714400_2714673_-	Ni(II)/Co(II)-binding transcriptional repressor RcnR	NA	NA	NA	NA
WP_000133660.1\|2714793_2715618_+	nickel/cobalt efflux protein RcnA	NA	NA	NA	NA
WP_000153074.1\|2715836_2716175_+	Ni(II)/Co(II) efflux transporter accessory subunit RcnB	NA	NA	NA	NA
WP_000405695.1\|2716256_2717291_-	putative fimbrial-like adhesin protein	NA	NA	NA	NA
WP_000945452.1\|2717306_2719787_-	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA
WP_000677393.1\|2719802_2720477_-	fimbria/pilus periplasmic chaperone	NA	NA	NA	NA
WP_000830457.1\|2720556_2721099_-	fimbrial protein	NA	NA	NA	NA
WP_001324851.1\|2721391_2721673_-	YehE family protein	NA	NA	NA	NA
WP_001005448.1\|2721935_2723045_-	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA
WP_001400694.1\|2723176_2725210_+\|tRNA	methionine--tRNA ligase	A0A1V0SDF2	Indivirus	1.8e-54	27.6
WP_001556120.1\|2729154_2732787_+	DUF4132 domain-containing protein	NA	NA	NA	NA
WP_000636925.1\|2732847_2733165_+	hypothetical protein	NA	NA	NA	NA
WP_001300974.1\|2733471_2734560_+	MoxR family ATPase	NA	NA	NA	NA
WP_001294387.1\|2734570_2736850_+	hypothetical protein	NA	NA	NA	NA
WP_001333512.1\|2736842_2737979_+	VWA domain-containing protein	Q9EYF7	Enterobacteria_phage	1.9e-162	97.7
WP_001400695.1\|2737975_2739976_+	hypothetical protein	Q9EYF6	Enterobacteria_phage	0.0e+00	96.0
WP_001295429.1\|2740100_2740562_+	YehR family lipoprotein	Q9EYF5	Enterobacteria_phage	1.9e-76	100.0
WP_000950409.1\|2740601_2741072_-	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	5.2e-82	100.0
WP_000598641.1\|2741118_2741838_-	two-component system response regulator BtsR	NA	NA	NA	NA
WP_001295431.1\|2741834_2743520_-	two-component regulatory system sensor histidine kinase BtsS	Q9EYF3	Enterobacteria_phage	2.5e-304	99.6
WP_001261971.1\|2744034_2744283_+	DinI-like family protein	H6WZN4	Escherichia_phage	2.4e-38	100.0
WP_025404399.1\|2744487_2745696_+	hypothetical protein	H6WZN3	Escherichia_phage	1.7e-230	99.3
WP_001025673.1\|2746347_2747589_+	type III secretion system effector NleA	H6WZN2	Escherichia_phage	3.2e-216	84.7
WP_024262412.1\|2748581_2748851_-\|tail	phage tail protein	Q687E5	Enterobacteria_phage	7.1e-44	97.8
WP_025404401.1\|2748852_2750166_-\|tail	tail fiber protein	A0A0P0ZCC1	Stx2-converting_phage	5.0e-82	98.6
WP_001230489.1\|2750230_2750830_-	Ail/Lom family outer membrane beta-barrel protein	A0A0P0ZE39	Stx2-converting_phage	9.7e-110	98.5
WP_097455678.1\|2754616_2755246_-\|tail	tail assembly protein	A0A0P0ZEN7	Stx2-converting_phage	3.5e-102	95.7
WP_025404403.1\|2755191_2755935_-\|tail	phage tail protein	Q6H9T4	Enterobacteria_phage	3.4e-144	94.7
WP_025404404.1\|2755940_2756639_-\|tail	phage minor tail protein L	S5M7Q4	Escherichia_phage	8.9e-131	97.4
WP_000807964.1\|2756638_2756980_-\|tail	phage tail protein	A0A0P0ZCS8	Stx2-converting_phage	8.7e-63	100.0
WP_025404405.1\|2756972_2760215_-\|tail	phage tail tape measure protein	B6ETF7	Enterobacteria_phage	0.0e+00	97.7
WP_001453698.1\|2760262_2760472_-	DUF4035 domain-containing protein	A0A0P0ZDE6	Stx2-converting_phage	2.0e-33	100.0
WP_001030063.1\|2760567_2760942_-\|tail	tail assembly protein	A0A0N7KZA2	Stx2-converting_phage	7.8e-65	100.0
WP_022581165.1\|2760947_2761664_-\|tail	tail protein	A0A0P0ZD29	Stx2-converting_phage	1.2e-125	97.1
WP_000133393.1\|2761722_2762067_-	DUF3168 domain-containing protein	A0A0P0ZC17	Stx2-converting_phage	9.4e-57	99.1
WP_000573391.1\|2762063_2762510_-	HK97 gp10 family phage protein	A0A0N7KZI9	Stx2-converting_phage	5.2e-76	100.0
WP_001007889.1\|2762506_2762857_-\|head	phage head closure protein	A0A0P0ZDP7	Stx2-converting_phage	2.7e-59	100.0
WP_000125988.1\|2762867_2763194_-\|head,tail	phage gp6-like head-tail connector protein	B6ETF0	Enterobacteria_phage	7.0e-54	100.0
WP_001074112.1\|2765720_2765942_-	hypothetical protein	H6WZL1	Escherichia_phage	3.2e-34	95.9
WP_022581168.1\|2765986_2767924_-\|capsid	phage major capsid protein	A0A0P0ZCT9	Stx2-converting_phage	0.0e+00	98.1
WP_025404407.1\|2767987_2769649_-\|terminase	terminase large subunit	H6WZK9	Escherichia_phage	0.0e+00	99.3
WP_025404408.1\|2769645_2770209_-\|terminase	terminase small subunit	B6DZ97	Enterobacteria_phage	1.4e-89	98.9
WP_000829192.1\|2770497_2770863_-	HNH endonuclease	B6ETE5	Enterobacteria_phage	1.6e-62	96.7
WP_000095744.1\|2770904_2771105_+	YlcI/YnfO family protein	H6WZK6	Escherichia_phage	1.3e-29	97.0
WP_000828070.1\|2771236_2771563_-	TonB family protein	H6WZK5	Escherichia_phage	6.3e-55	98.1
WP_012816791.1\|2771963_2772149_-	membrane protein	A0A0P0ZCT3	Stx2-converting_phage	1.2e-18	100.0
WP_001280923.1\|2772371_2772503_-	hypothetical protein	A0A0P0ZG36	Escherichia_phage	3.8e-11	93.0
WP_000661708.1\|2772597_2773293_-	phage antirepressor protein	Q5MBW0	Stx1-converting_phage	3.6e-124	98.7
WP_000992065.1\|2773566_2774100_-	lysozyme	Q6H9V6	Enterobacteria_phage	6.2e-100	95.5
WP_000731192.1\|2774150_2774495_-	YdfR family protein	A0A0P0ZD64	Stx2-converting_phage	6.5e-58	98.2
WP_000411809.1\|2774499_2774706_-\|holin	holin	Q6H9V8	Enterobacteria_phage	2.4e-31	100.0
WP_025404260.1\|2777648_2778299_-	SASA family carbohydrate esterase	H6WZJ9	Escherichia_phage	3.1e-109	92.1
WP_025404410.1\|2779406_2779595_-	hypothetical protein	K7PJU3	Enterobacteria_phage	1.8e-17	66.7
WP_085961182.1\|2779668_2780881_+\|transposase	IS3-like element IS629 family transposase	Q6H9S3	Enterobacteria_phage	4.9e-169	99.7
WP_001216963.1\|2781424_2781532_+	protein YohO	NA	NA	NA	NA
WP_000783120.1\|2781512_2782244_-	glycine betaine ABC transporter permease YehW	NA	NA	NA	NA
WP_000569315.1\|2782248_2783175_-	glycine betaine ABC transporter ATP binding protein YehX	G3M9Y6	Bacillus_virus	2.8e-23	30.8
WP_000220837.1\|2783167_2784325_-	glycine betaine ABC transporter permease YehY	NA	NA	NA	NA
WP_001130308.1\|2784331_2785249_-	glycine betaine ABC transporter substrate-binding protein OsmF	NA	NA	NA	NA
WP_000871507.1\|2785459_2787757_-	beta-glucosidase BglX	NA	NA	NA	NA
WP_000097402.1\|2787952_2789668_+	D-lactate dehydrogenase	NA	NA	NA	NA
WP_001319943.1\|2789705_2790638_-	D-alanyl-D-alanine endopeptidase	NA	NA	NA	NA
WP_001295454.1\|2790811_2791399_-	YIP1 family protein	NA	NA	NA	NA
WP_001296821.1\|2791568_2792147_+	DedA family protein	NA	NA	NA	NA
WP_000079538.1\|2792276_2793038_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_001469803.1\|2793090_2794617_-	multidrug resistance outer membrane protein MdtQ	NA	NA	NA	NA
WP_000691708.1\|2794750_2794834_+	protein YohP	NA	NA	NA	NA
WP_001264861.1\|2795206_2796154_-\|tRNA	tRNA dihydrouridine(16) synthase DusC	NA	NA	NA	NA
WP_001295452.1\|2796392_2796791_+	CidA/LrgA family protein	NA	NA	NA	NA
WP_000968208.1\|2796787_2797483_+\|lysis	CidB/LrgB family autolysis modulator	NA	NA	NA	NA

DBSCAN-SWA_12

2989509 : 3083693

101

Escherichia_phage(63.01%)

tail,tRNA,portal,holin,terminase,capsid,bacteriocin,integrase

attL 3021221:3021244|attR 3083889:3083912

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001283590.1\|2989509_2990322_-\|tRNA	tRNA pseudouridine(38-40) synthase TruA	NA	NA	NA	NA
WP_001289160.1\|2990321_2991335_-	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_000699113.1\|2991400_2992537_-	4-phosphoerythronate dehydrogenase PdxB	A0A2R8FDS8	Brazilian_cedratvirus	5.3e-24	29.8
WP_000615820.1\|2992635_2993631_+	flagella biosynthesis regulator Flk	NA	NA	NA	NA
WP_000127796.1\|2993627_2994806_-	MFS transporter	NA	NA	NA	NA
WP_000817178.1\|2995080_2996301_-	beta-ketoacyl-ACP synthase I	NA	NA	NA	NA
WP_000683767.1\|2996459_2998466_+\|tRNA	bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC	NA	NA	NA	NA
WP_000559764.1\|2998586_2998865_-	YfcL family protein	NA	NA	NA	NA
WP_001089226.1\|2998898_2999447_-	elongation factor P hydroxylase	NA	NA	NA	NA
WP_000447356.1\|2999446_3000256_-	TSUP family transporter	NA	NA	NA	NA
WP_001043835.1\|3000255_3001080_-	penicillin-insensitive murein endopeptidase	NA	NA	NA	NA
WP_001307917.1\|3001083_3002169_-	chorismate synthase	A0A291AU41	Pandoravirus	2.7e-89	47.5
WP_001309606.1\|3002203_3003136_-	50S ribosomal protein L3 N(5)-glutamine methyltransferase	NA	NA	NA	NA
WP_000730806.1\|3003301_3003853_+	endonuclease SmrB	NA	NA	NA	NA
WP_001383353.1\|3003966_3004806_-	DUF2544 domain-containing protein	NA	NA	NA	NA
WP_000782937.1\|3004806_3005331_-	fimbrial protein	NA	NA	NA	NA
WP_000698462.1\|3005327_3005804_-	fimbrial protein	NA	NA	NA	NA
WP_001248900.1\|3005800_3006304_-	fimbrial protein	NA	NA	NA	NA
WP_000182848.1\|3006319_3007072_-	fimbria/pilus periplasmic chaperone	NA	NA	NA	NA
WP_001112840.1\|3007094_3009734_-	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA
WP_000033336.1\|3009815_3010379_-	type 1 fimbrial protein	NA	NA	NA	NA
WP_001195819.1\|3011021_3011507_-	phosphohistidine phosphatase SixA	NA	NA	NA	NA
WP_000426149.1\|3011709_3013854_-	fatty acid oxidation complex subunit alpha FadJ	NA	NA	NA	NA
WP_000531918.1\|3013853_3015164_-	acetyl-CoA C-acyltransferase FadI	NA	NA	NA	NA
WP_000030901.1\|3015345_3015630_-	YfcZ/YiiS family protein	NA	NA	NA	NA
WP_001307921.1\|3016001_3017342_+	long-chain fatty acid transporter FadL	NA	NA	NA	NA
WP_000937775.1\|3017707_3018982_+	hypothetical protein	NA	NA	NA	NA
WP_000776768.1\|3019163_3019919_-	phospholipid-binding lipoprotein MlaA	NA	NA	NA	NA
WP_000368129.1\|3020212_3021145_+	formate/nitrite transporter family protein	E7DYY8	Enterobacteria_phage	2.7e-167	99.7
3021221:3021244	attL	NA	NA	NA	NA
WP_032161876.1\|3021367_3029767_-	hypothetical protein	A0A0P0ZCC7	Stx2-converting_phage	0.0e+00	93.9
WP_025404420.1\|3029835_3031101_-	hypothetical protein	A0A2L1IV65	Escherichia_phage	3.9e-185	90.5
WP_025404421.1\|3031111_3031363_-\|bacteriocin	bacteriocin	A0A2R2Z351	Escherichia_phage	7.9e-13	100.0
WP_000455646.1\|3031372_3031819_-	hypothetical protein	A0A2L1IV89	Escherichia_phage	1.3e-74	97.3
WP_025404422.1\|3031821_3032475_-	hypothetical protein	Q08J74	Stx2-converting_phage	6.7e-112	98.6
WP_000035555.1\|3032568_3032970_-	hypothetical protein	Q08J75	Stx2-converting_phage	7.0e-72	100.0
WP_000078907.1\|3033026_3033167_-	Hok/Gef family protein	A0A2R2X2B4	Escherichia_phage	3.1e-19	100.0
WP_000836187.1\|3033399_3034137_-	Ail/Lom family outer membrane beta-barrel protein	A0A2L1IV31	Escherichia_phage	1.1e-110	81.2
WP_001459282.1\|3034216_3034834_-	hypothetical protein	A0A2L1IV83	Escherichia_phage	3.7e-120	98.0
WP_000455633.1\|3034839_3035118_-	outer membrane protein	A0A2L1IV69	Escherichia_phage	2.6e-49	100.0
WP_000197188.1\|3035132_3036401_-	host specificity protein J	A0A2R2Z364	Escherichia_phage	1.4e-219	99.8
WP_001146321.1\|3036397_3038023_-	hypothetical protein	A0A1I9LJT3	Stx_converting_phage	0.0e+00	99.4
WP_001303606.1\|3038317_3038506_-	hypothetical protein	A0A2R2Z344	Escherichia_phage	6.9e-30	100.0
WP_001023407.1\|3038644_3038914_-\|tail	phage tail protein	H6WZN0	Escherichia_phage	1.4e-44	98.9
WP_012816803.1\|3038915_3040853_-\|tail	tail fiber protein	A0A1I9LJS9	Stx_converting_phage	3.1e-64	99.3
WP_000207922.1\|3040849_3041500_-	hypothetical protein	A0A0P0ZG46	Escherichia_phage	4.6e-121	100.0
WP_000829202.1\|3041499_3042063_-	hypothetical protein	A0A0P0ZGG2	Escherichia_phage	4.1e-102	100.0
WP_001371266.1\|3042046_3042508_-	hypothetical protein	V5URI4	Shigella_phage	7.8e-75	99.3
WP_001140444.1\|3042557_3042947_-	hypothetical protein	V5UT93	Shigella_phage	9.9e-63	100.0
WP_000214474.1\|3043001_3044216_-\|capsid	N4-gp56 family major capsid protein	A0A2R2Z358	Escherichia_phage	1.3e-233	100.0
WP_000345011.1\|3044239_3045247_-	hypothetical protein	Q08J90	Stx2-converting_phage	3.0e-180	99.7
WP_000787520.1\|3045404_3047549_-\|portal	portal protein	A0A1U9AJF2	Stx1_converting_phage	0.0e+00	100.0
WP_000143988.1\|3047548_3049255_-\|terminase	terminase	A0A2R2Z350	Escherichia_phage	0.0e+00	100.0
WP_001086069.1\|3049235_3050042_-\|terminase	terminase	A0A2R2Z334	Escherichia_phage	7.6e-134	100.0
WP_001108577.1\|3050334_3050886_-	Rha family transcriptional regulator	A0A0P0ZFJ1	Escherichia_phage	8.4e-100	99.5
WP_012816804.1\|3051124_3051310_-	membrane protein	A0A1U9AJA4	Stx1_converting_phage	4.0e-22	85.2
WP_000539792.1\|3051537_3051684_-	hypothetical protein	A0A0P0ZE99	Stx2-converting_phage	2.6e-16	100.0
WP_001056806.1\|3051683_3052253_-	hypothetical protein	A0A1I9LJR6	Stx_converting_phage	3.1e-105	100.0
WP_000087702.1\|3052523_3053057_-	lysozyme	A0A1I9LJR4	Stx_converting_phage	1.6e-100	97.2
WP_000284506.1\|3053061_3053277_-\|holin	holin	Q9ZWW2	Enterobacteria_phage	6.9e-34	100.0
WP_001290217.1\|3053353_3053626_-	DUF826 domain-containing protein	A0A0P0ZC09	Stx2-converting_phage	4.8e-24	100.0
WP_000142777.1\|3053666_3053846_-	DUF1378 family protein	A0A2R2Z345	Escherichia_phage	1.4e-24	96.6
WP_025404423.1\|3053982_3055920_-	SASA family carbohydrate esterase	A0A0P0ZGE0	Escherichia_phage	0.0e+00	99.2
WP_000738068.1\|3056417_3056687_-	Shiga toxin Stx2a subunit B	A0A2R2Z326	Escherichia_phage	1.2e-43	100.0
WP_000649753.1\|3056698_3057658_-	Shiga toxin Stx2c subunit A	Q776Q3	Enterobacteria_phage	5.6e-176	100.0
WP_001204859.1\|3058441_3058876_-	antitermination protein	A0A0P0ZGJ3	Escherichia_phage	4.8e-82	100.0
WP_000144767.1\|3058868_3059063_-	protein ninH	A0A0P0ZGE1	Escherichia_phage	8.4e-31	100.0
WP_000813671.1\|3059059_3059623_-	recombination protein NinG	A0A0P0ZG59	Escherichia_phage	8.9e-105	100.0
WP_000402092.1\|3059630_3060080_-	DUF1367 family protein	A0A0P0ZFW0	Escherichia_phage	7.6e-83	100.0
WP_001193567.1\|3060079_3061051_-	DNA primase	A0A2R2Z336	Escherichia_phage	1.4e-195	100.0
WP_000913119.1\|3061040_3062561_-	DEAD/DEAH box helicase	A0A2R2Z335	Escherichia_phage	6.4e-307	100.0
WP_001271433.1\|3062554_3062932_-	hypothetical protein	A0A2R2Z329	Escherichia_phage	4.0e-61	100.0
WP_000171145.1\|3063455_3063695_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_000162431.1\|3063800_3064520_+	LexA family transcriptional regulator	A0A2R2X2B0	Escherichia_phage	3.1e-86	68.6
WP_000939555.1\|3064615_3066085_+	SAM-dependent methyltransferase	A0A2R2Z316	Escherichia_phage	2.7e-278	97.1
WP_025404424.1\|3066081_3067035_+	restriction endonuclease BsuBI	A0A0P0ZG22	Escherichia_phage	3.6e-183	97.8
WP_000331648.1\|3067215_3067686_+	DUF4065 domain-containing protein	D0UIM3	Aggregatibacter_phage	5.4e-23	41.6
WP_001292087.1\|3067685_3068066_+	hypothetical protein	NA	NA	NA	NA
WP_113706115.1\|3068683_3069469_+	hypothetical protein	A0A0P0ZGC2	Escherichia_phage	2.0e-139	96.2
WP_024177061.1\|3069823_3070045_+	hypothetical protein	A0A0P0ZGC3	Escherichia_phage	3.2e-34	98.6
WP_000995345.1\|3070065_3070347_+	host nuclease inhibitor GamL	A0A0P0ZFG3	Escherichia_phage	1.1e-47	100.0
WP_000459721.1\|3070363_3071314_+	recombinase RecT	A0A0P0ZFY9	Escherichia_phage	1.1e-179	100.0
WP_000187063.1\|3071310_3072000_+	YqaJ viral recombinase family protein	A0A0P0ZFI7	Escherichia_phage	3.5e-135	100.0
WP_000344636.1\|3071999_3072587_+	hypothetical protein	A0A0N7KZV4	Escherichia_phage	2.0e-107	99.5
WP_001071603.1\|3072661_3073009_+	hypothetical protein	A0A0P0ZGH3	Escherichia_phage	5.9e-59	100.0
WP_000080417.1\|3073072_3073894_+	YfdQ family protein	A0A2R2Z323	Escherichia_phage	2.3e-149	100.0
WP_001159714.1\|3073970_3074414_+	hypothetical protein	A0A0H4IQ60	Shigella_phage	1.9e-78	99.3
WP_001453790.1\|3074521_3075400_+	phosphoadenosine phosphosulfate reductase family protein	A0A2R2Z314	Escherichia_phage	1.0e-179	100.0
WP_000157000.1\|3075396_3075600_+	hypothetical protein	A0A2R2Z313	Escherichia_phage	4.7e-32	100.0
WP_000476216.1\|3075592_3075832_+	hypothetical protein	A0A2R2Z309	Escherichia_phage	6.7e-38	97.5
WP_000036158.1\|3075828_3076530_+	ead/Ea22-like family protein	A0A0H4ISY5	Shigella_phage	1.7e-134	100.0
WP_000628769.1\|3077043_3077997_+	DUF551 domain-containing protein	A0A1U9AJ59	Stx1_converting_phage	2.0e-80	55.0
WP_000969523.1\|3077993_3078254_+	hypothetical protein	A0A1B1W289	Salmonella_phage	9.3e-41	97.6
WP_000609351.1\|3078338_3079082_+	hypothetical protein	A0A0P0ZD96	Stx2-converting_phage	2.8e-122	99.1
WP_000203819.1\|3079405_3079693_+	phage antirepressor Ant	V5URG2	Shigella_phage	3.9e-48	97.9
WP_000211520.1\|3079942_3080572_+	phage antirepressor Ant	G9L6G1	Escherichia_phage	2.3e-117	100.0
WP_000809302.1\|3080627_3081059_+	hypothetical protein	A0A2R2Z303	Escherichia_phage	7.3e-75	100.0
WP_000163448.1\|3081055_3081682_+	adenine methylase	G9L6F9	Escherichia_phage	1.8e-122	100.0
WP_001291843.1\|3081641_3081854_+	DUF1382 family protein	A0A0P0ZGA1	Escherichia_phage	7.1e-31	100.0
WP_000994795.1\|3081889_3082279_+	DUF1627 domain-containing protein	A0A0H4J3B1	Shigella_phage	2.1e-52	100.0
WP_000453637.1\|3082357_3082540_+	helix-turn-helix domain-containing protein	A0A2R2Z2X2	Escherichia_phage	4.1e-27	100.0
WP_001218304.1\|3082523_3083693_-\|integrase	integrase family protein	G3CFG6	Escherichia_phage	3.7e-230	99.7
3083889:3083912	attR	NA	NA	NA	NA

DBSCAN-SWA_13

3315051 : 3395099

Enterobacteria_phage(45.24%)

tail,tRNA,portal,holin,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001295363.1\|3315051_3315789_-\|tRNA	tRNA (adenosine(37)-N6)-methyltransferase TrmM	NA	NA	NA	NA
WP_000219193.1\|3315920_3317255_+	ATP-dependent RNA helicase SrmB	E3T5E1	Cafeteria_roenbergensis_virus	2.9e-45	30.8
WP_025404428.1\|3317287_3318169_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_000189191.1\|3318271_3318859_+	cysteine/O-acetylserine transporter	NA	NA	NA	NA
WP_000627804.1\|3318914_3319298_-	autonomous glycyl radical cofactor GrcA	A0A088FS37	Shigella_phage	4.7e-33	70.9
WP_001262720.1\|3319602_3320292_+	uracil-DNA glycosylase	A0A077BCN4	Equid_alphaherpesvirus	3.5e-55	52.1
WP_000997403.1\|3320339_3321377_-\|tRNA	tRNA/rRNA methyltransferase	NA	NA	NA	NA
WP_001098726.1\|3321583_3322003_+	thioredoxin TrxC	A0A0K2FIM3	Achromobacter_phage	2.8e-15	38.5
WP_024221634.1\|3322071_3322770_+	DTW domain-containing protein	NA	NA	NA	NA
WP_000082991.1\|3322801_3325462_+	protein lysine acetyltransferase	NA	NA	NA	NA
WP_000949265.1\|3325575_3326931_+	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA
WP_000464869.1\|3326955_3327300_+	YfiM family lipoprotein	NA	NA	NA	NA
WP_001235102.1\|3334371_3336945_-	ATP-dependent chaperone ClpB	H6X3M6	Enterobacteria_phage	2.6e-127	35.3
WP_000040153.1\|3337074_3337806_-	polyphenol oxidase	NA	NA	NA	NA
WP_000079110.1\|3337802_3338783_-	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	NA	NA	NA	NA
WP_000197686.1\|3338917_3339655_+	outer membrane protein assembly factor BamD	NA	NA	NA	NA
WP_000178456.1\|3339925_3340267_+	ribosome-associated translation inhibitor RaiA	NA	NA	NA	NA
WP_001386991.1\|3340370_3340418_+	hypothetical protein	NA	NA	NA	NA
WP_000200122.1\|3340516_3341677_+	bifunctional chorismate mutase/prephenate dehydratase	NA	NA	NA	NA
WP_000225204.1\|3341719_3342841_-	bifunctional chorismate mutase/prephenate dehydrogenase	NA	NA	NA	NA
WP_001168045.1\|3342851_3343922_-	3-deoxy-7-phosphoheptulonate synthase AroF	A0A0F6R6T6	Escherichia_coli_O157_typing_phage	4.0e-90	51.2
WP_000976004.1\|3344131_3344497_+	DUF2799 domain-containing protein	NA	NA	NA	NA
WP_001212383.1\|3344646_3345165_+	YfiR family protein	NA	NA	NA	NA
WP_000368157.1\|3345157_3346381_+	diguanylate cyclase DgcN	NA	NA	NA	NA
WP_000589825.1\|3346396_3346879_+	OmpA family protein	NA	NA	NA	NA
WP_000065253.1\|3346955_3347303_-	50S ribosomal protein L19	NA	NA	NA	NA
WP_000264777.1\|3347344_3348112_-\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
WP_000043335.1\|3348142_3348691_-	ribosome maturation factor RimM	NA	NA	NA	NA
WP_000256450.1\|3348709_3348958_-	30S ribosomal protein S16	NA	NA	NA	NA
WP_000460035.1\|3349094_3350456_-	signal recognition particle protein	NA	NA	NA	NA
WP_001189257.1\|3350547_3351414_+	inner membrane protein YpjD	NA	NA	NA	NA
WP_032149952.1\|3351434_3352721_+	HlyC/CorC family transporter	NA	NA	NA	NA
WP_001296310.1\|3352775_3353369_-	nucleotide exchange factor GrpE	NA	NA	NA	NA
WP_001059169.1\|3353490_3354369_+	NAD(+) kinase	NA	NA	NA	NA
WP_000880920.1\|3354454_3356116_+	DNA repair protein RecN	NA	NA	NA	NA
WP_001203437.1\|3356264_3356606_+	outer membrane protein assembly factor BamE	NA	NA	NA	NA
WP_001117838.1\|3356667_3356958_-	RnfH family protein	NA	NA	NA	NA
WP_000600190.1\|3356947_3357424_-	type II toxin-antitoxin system toxin RatA	NA	NA	NA	NA
WP_000162574.1\|3357555_3358038_+	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	4.0e-29	46.8
WP_001217542.1\|3358886_3359135_+	DinI-like family protein	A5LH55	Enterobacteria_phage	3.1e-38	98.8
WP_001121225.1\|3359728_3360379_+	DUF1076 domain-containing protein	B6ETE1	Enterobacteria_phage	1.2e-121	99.1
WP_000491541.1\|3360603_3361479_-	hypothetical protein	A0A0P0ZCT1	Stx2-converting_phage	2.8e-158	97.6
WP_001023407.1\|3361619_3361889_-\|tail	phage tail protein	H6WZN0	Escherichia_phage	1.4e-44	98.9
WP_025404429.1\|3361890_3363204_-\|tail	tail fiber protein	A0A0P0ZD68	Stx2-converting_phage	1.3e-77	98.4
WP_001230514.1\|3363268_3363868_-	Ail/Lom family outer membrane beta-barrel protein	A0A0P0ZE39	Stx2-converting_phage	5.7e-110	99.0
WP_025404430.1\|3363935_3367412_-	host specificity protein J	Q687E8	Enterobacteria_phage	0.0e+00	95.4
WP_148294921.1\|3367653_3368283_-\|tail	tail assembly protein	A0A0P0ZEN7	Stx2-converting_phage	9.9e-97	91.9
WP_025404434.1\|3368981_3369680_-\|tail	phage minor tail protein L	A0A0P0ZD82	Stx2-converting_phage	8.9e-131	97.8
WP_000847298.1\|3369679_3370009_-\|tail	phage tail protein	Q687F2	Enterobacteria_phage	4.3e-59	100.0
WP_025404435.1\|3370005_3372651_-\|tail	phage tail tape measure protein	Q687F3	Enterobacteria_phage	0.0e+00	95.7
WP_000532075.1\|3372694_3373003_-\|tail	phage tail assembly protein T	S5MDP5	Escherichia_phage	3.0e-54	99.0
WP_000479061.1\|3373029_3373452_-\|tail	phage minor tail protein G	S5MQJ3	Escherichia_phage	3.7e-71	97.1
WP_025404436.1\|3373465_3374218_-\|tail	phage tail protein	Q687F6	Enterobacteria_phage	3.8e-135	99.6
WP_000682716.1\|3374225_3374624_-\|tail	tail protein	Q9EYD7	Enterobacteria_phage	5.9e-71	100.0
WP_000974966.1\|3374636_3375260_-	hypothetical protein	Q9EYD6	Enterobacteria_phage	6.6e-101	100.0
WP_001281350.1\|3375262_3375544_-	DNA breaking-rejoining protein	Q8VNN4	Enterobacteria_phage	3.9e-45	97.8
WP_001097065.1\|3375536_3375863_-	DUF2190 family protein	Q9EYD5	Enterobacteria_phage	6.1e-50	100.0
WP_001365078.1\|3375950_3377930_-\|protease	Clp protease ClpP	S5M7Q8	Escherichia_phage	0.0e+00	98.9
WP_000974567.1\|3377919_3379422_-\|portal	phage portal protein	Q8VNN6	Enterobacteria_phage	1.2e-289	99.8
WP_000102415.1\|3379421_3379634_-	hypothetical protein	S5MBY8	Escherichia_phage	3.0e-29	98.6
WP_158414418.1\|3381334_3381529_-	hypothetical protein	Q8VNN7	Enterobacteria_phage	6.3e-18	97.7
WP_113706117.1\|3381492_3381753_-	hypothetical protein	Q9EYD1	Enterobacteria_phage	1.4e-36	88.4
WP_000373407.1\|3381749_3382226_-	DUF1441 family protein	Q8VNN8	Enterobacteria_phage	3.3e-84	100.0
WP_012816804.1\|3382700_3382886_-	membrane protein	A0A1U9AJA4	Stx1_converting_phage	4.0e-22	85.2
WP_001092872.1\|3383404_3383938_-	lysozyme	Q08J98	Stx2-converting_phage	6.2e-100	96.0
WP_000909834.1\|3384068_3384701_+	hypothetical protein	NA	NA	NA	NA
WP_025404437.1\|3384921_3385245_-	YdfR family protein	A0A0P0ZD64	Stx2-converting_phage	1.0e-52	99.0
WP_000284517.1\|3385249_3385465_-\|holin	holin	A0A0P0ZC45	Stx2-converting_phage	4.5e-33	98.6
WP_025404438.1\|3385614_3387468_-	SASA family carbohydrate esterase	H6WZJ9	Escherichia_phage	0.0e+00	97.9
WP_000499458.1\|3387875_3388043_-	DUF3927 family protein	NA	NA	NA	NA
WP_001302581.1\|3388128_3388872_-	hypothetical protein	NA	NA	NA	NA
WP_001235472.1\|3389124_3389748_-	antitermination protein	K7PM87	Enterobacteria_phage	2.2e-112	98.1
WP_001028854.1\|3389744_3390410_-	serine/threonine protein phosphatase	Q5TJL8	Enterobacteria_phage	5.0e-131	99.5
WP_001108081.1\|3390992_3391559_-	HNH endonuclease	A0A1U9AJK5	Stx1_converting_phage	2.3e-108	100.0
WP_001505174.1\|3392116_3393889_+	hypothetical protein	A0A1U9AJG3	Stx1_converting_phage	0.0e+00	99.5
WP_001254222.1\|3394392_3394575_-	NinE family protein	Q8H9Z6	Enterobacteria_phage	1.9e-29	100.0
WP_000153262.1\|3394571_3395099_-	phage N-6-adenine-methyltransferase	Q8H9Z7	Enterobacteria_phage	3.6e-100	99.4

DBSCAN-SWA_14

3691525 : 3702114

Enterobacteria_phage(88.89%)

integrase

attL 3687086:3687098|attR 3705268:3705280

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3687086:3687098	attL	NA	NA	NA	NA
WP_025404448.1\|3691525_3693859_-	DNA primase	Q7M2A8	Enterobacteria_phage	0.0e+00	99.0
WP_000856729.1\|3693873_3694194_-	DUF5375 domain-containing protein	NA	NA	NA	NA
WP_000459319.1\|3694329_3694785_-	hypothetical protein	Q7M298	Enterobacteria_phage	4.7e-64	98.2
WP_001244665.1\|3694777_3695065_-	hypothetical protein	Q7M2A0	Enterobacteria_phage	8.6e-48	97.9
WP_025404449.1\|3695057_3695648_-	host cell division inhibitor Icd-like protein	Q7M2A7	Enterobacteria_phage	4.5e-67	97.0
WP_001149160.1\|3695644_3695911_-	AlpA family transcriptional regulator	Q7M299	Enterobacteria_phage	4.9e-45	100.0
WP_001283035.1\|3696462_3697197_+	hypothetical protein	Q7M2A2	Enterobacteria_phage	2.7e-130	99.2
WP_000638631.1\|3697193_3697694_+	transactivation protein	NA	NA	NA	NA
WP_000446132.1\|3697767_3698340_+	Polarity suppression protein	Q7M2A1	Enterobacteria_phage	2.2e-95	97.3
WP_000611230.1\|3698650_3699073_-	hypothetical protein	NA	NA	NA	NA
WP_000220867.1\|3699069_3700941_-	DEAD/DEAH box helicase family protein	A0A097BY72	Enterococcus_phage	5.3e-13	21.7
WP_001218984.1\|3700950_3702114_-\|integrase	tyrosine-type recombinase/integrase	Q7M297	Enterobacteria_phage	2.9e-203	88.9
3705268:3705280	attR	NA	NA	NA	NA

DBSCAN-SWA_15

4080581 : 4141886

uncultured_Mediterranean_phage(20.0%)

transposase,tRNA,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000366126.1\|4080581_4081079_-\|protease	ClpXP protease specificity-enhancing factor	A0A1S5R3H3	Pseudomonas_phage	2.5e-26	54.8
WP_000257293.1\|4081084_4081723_-	stringent starvation protein A	NA	NA	NA	NA
WP_000829818.1\|4082117_4082510_-	30S ribosomal protein S9	NA	NA	NA	NA
WP_000847559.1\|4082525_4082954_-	50S ribosomal protein L13	NA	NA	NA	NA
WP_001192336.1\|4083172_4084300_-	cell division protein ZapE	NA	NA	NA	NA
WP_001295270.1\|4084493_4084892_+	DUF1043 family protein	NA	NA	NA	NA
WP_001295271.1\|4085045_4086413_+\|protease	serine endoprotease DegQ	A0A1B1IT49	uncultured_Mediterranean_phage	2.3e-21	25.6
WP_000497723.1\|4086502_4087570_+	outer membrane-stress sensor serine endopeptidase DegS	A0A1S5Y2X3	uncultured_archaeal_virus	6.8e-05	24.2
WP_001295272.1\|4087632_4088571_-	malate dehydrogenase	NA	NA	NA	NA
WP_001257846.1\|4089005_4089476_+	transcriptional regulator ArgR	NA	NA	NA	NA
WP_000695688.1\|4089840_4090104_+	peroxide/acid stress response protein YhcN	NA	NA	NA	NA
WP_001029006.1\|4090159_4090432_-	hypothetical protein	NA	NA	NA	NA
WP_000510962.1\|4090523_4092491_-	p-hydroxybenzoic acid efflux pump subunit AaeB	NA	NA	NA	NA
WP_000854033.1\|4092496_4093429_-	p-hydroxybenzoic acid efflux pump subunit AaeA	NA	NA	NA	NA
WP_000051841.1\|4093436_4093640_-	AaeX family protein	NA	NA	NA	NA
WP_025404463.1\|4093822_4094752_+	HTH-type transcriptional activator AaeR	NA	NA	NA	NA
WP_000055909.1\|4094879_4096325_-\|protease	metalloprotease TldD	NA	NA	NA	NA
WP_001253607.1\|4096480_4100281_-	AsmA2 domain-containing protein	NA	NA	NA	NA
WP_000123197.1\|4100348_4101818_-	ribonuclease G	NA	NA	NA	NA
WP_000203108.1\|4101807_4102401_-	nucleoside triphosphate pyrophosphatase YhdE	NA	NA	NA	NA
WP_000179409.1\|4102409_4102898_-	rod shape-determining protein MreD	NA	NA	NA	NA
WP_000802515.1\|4102897_4104001_-	rod shape-determining protein MreC	NA	NA	NA	NA
WP_000913396.1\|4104066_4105110_-	rod shape-determining protein MreB	F2Y0P3	Organic_Lake_phycodnavirus	6.7e-05	22.3
WP_001241422.1\|4105414_4107355_-	RNase E specificity factor CsrD	NA	NA	NA	NA
WP_001148476.1\|4107506_4108481_+	oxidoreductase	NA	NA	NA	NA
WP_000838308.1\|4108517_4109348_+	hypothetical protein	NA	NA	NA	NA
WP_000354622.1\|4110213_4110684_+	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA
WP_000884639.1\|4110694_4112044_+	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA
WP_000381170.1\|4112152_4112395_+	YhdT family protein	NA	NA	NA	NA
WP_001175715.1\|4112384_4113836_+	sodium/pantothenate symporter	NA	NA	NA	NA
WP_001145827.1\|4113847_4114729_+	50S ribosomal protein L11 methyltransferase	NA	NA	NA	NA
WP_001219652.1\|4115057_4116023_+\|tRNA	tRNA dihydrouridine synthase DusB	NA	NA	NA	NA
WP_000462905.1\|4116048_4116345_+	DNA-binding transcriptional regulator Fis	NA	NA	NA	NA
WP_001258919.1\|4116430_4117315_+	adenine-specific DNA-methyltransferase	M4QNN5	Ostreococcus_lucimarinus_virus	4.9e-25	30.5
WP_001295275.1\|4117398_4117578_+	DUF2556 family protein	NA	NA	NA	NA
WP_001129518.1\|4117580_4118243_-	multidrug efflux transporter transcriptional repressor AcrS	NA	NA	NA	NA
WP_000160334.1\|4118641_4119799_+	multidrug efflux RND transporter periplasmic adaptor subunit AcrE	NA	NA	NA	NA
WP_113706119.1\|4119868_4121081_-\|transposase	IS3-like element IS629 family transposase	Q6H9S3	Enterobacteria_phage	2.2e-169	100.0
WP_000825639.1\|4121582_4121804_-	membrane protein	NA	NA	NA	NA
WP_032162153.1\|4122056_4125149_-	multidrug efflux RND transporter permease subunit AcrF	NA	NA	NA	NA
WP_113706120.1\|4125202_4126415_+\|transposase	IS3 family transposase	Q6H9S3	Enterobacteria_phage	9.3e-168	99.0
WP_029594386.1\|4126454_4127465_+	amino acid ABC transporter substrate-binding protein	A0A1B1IT51	uncultured_Mediterranean_phage	1.4e-71	39.7
WP_000019655.1\|4127532_4128714_+	amino acid ABC transporter permease	NA	NA	NA	NA
WP_001301413.1\|4128723_4129827_+	amino acid ABC transporter permease	NA	NA	NA	NA
WP_000078340.1\|4129834_4130593_+	amino acid ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	9.1e-20	31.2
WP_022581407.1\|4136476_4137031_+	gamma carbonic anhydrase family protein	NA	NA	NA	NA
WP_001070559.1\|4137006_4137264_-	DUF1488 domain-containing protein	NA	NA	NA	NA
WP_000451242.1\|4137260_4138079_-	shikimate dehydrogenase	NA	NA	NA	NA
WP_001301437.1\|4138083_4138656_-	L-threonylcarbamoyladenylate synthase type 1 TsaC	NA	NA	NA	NA
WP_001129723.1\|4138660_4139203_-	hypothetical protein	NA	NA	NA	NA
WP_000460670.1\|4139231_4139705_-	DUF494 domain-containing protein	NA	NA	NA	NA
WP_085947970.1\|4140672_4141886_-\|transposase	IS3 family transposase	H6WZH1	Escherichia_phage	2.9e-169	100.0

DBSCAN-SWA_16

4559028 : 4569420

Enterobacteria_phage(100.0%)

integrase

attL 4552414:4552426|attR 4564155:4564167

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
4552414:4552426	attL	NA	NA	NA	NA
WP_001218986.1\|4559028_4560204_+\|integrase	tyrosine-type recombinase/integrase	Q7M297	Enterobacteria_phage	1.3e-211	93.0
WP_000503665.1\|4560208_4561117_+	hypothetical protein	NA	NA	NA	NA
WP_000446137.1\|4562596_4563169_-	Polarity suppression protein	Q7M2A1	Enterobacteria_phage	3.8e-95	96.8
WP_000638631.1\|4563242_4563743_-	transactivation protein	NA	NA	NA	NA
WP_001283035.1\|4563739_4564474_-	hypothetical protein	Q7M2A2	Enterobacteria_phage	2.7e-130	99.2
4564155:4564167	attR	NA	NA	NA	NA
WP_001149160.1\|4565025_4565292_+	AlpA family transcriptional regulator	Q7M299	Enterobacteria_phage	4.9e-45	100.0
WP_025404478.1\|4565288_4565888_+	host cell division inhibitor Icd-like protein	Q7M2A7	Enterobacteria_phage	3.0e-58	89.1
WP_001244665.1\|4565880_4566168_+	hypothetical protein	Q7M2A0	Enterobacteria_phage	8.6e-48	97.9
WP_000459319.1\|4566160_4566616_+	hypothetical protein	Q7M298	Enterobacteria_phage	4.7e-64	98.2
WP_000856729.1\|4566751_4567072_+	DUF5375 domain-containing protein	NA	NA	NA	NA
WP_025404479.1\|4567086_4569420_+	DNA primase	Q7M2A8	Enterobacteria_phage	0.0e+00	98.7

DBSCAN-SWA_17

4838968 : 4922940

Escherichia_phage(35.56%)

tail,tRNA,head,portal,holin,protease,terminase,plate,capsid,integrase,lysis

attL 4871783:4871829|attR 4905465:4905511

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000560983.1\|4838968_4839406_+\|tRNA	D-tyrosyl-tRNA(Tyr) deacylase	NA	NA	NA	NA
WP_001343389.1\|4839450_4840392_+	fatty acid biosynthesis protein FabY	NA	NA	NA	NA
WP_001295676.1\|4843292_4843511_+	CopG family transcriptional regulator	NA	NA	NA	NA
WP_001086385.1\|4843727_4843970_+	hypothetical protein	NA	NA	NA	NA
WP_000027708.1\|4844299_4845229_-	formate dehydrogenase accessory protein FdhE	NA	NA	NA	NA
WP_025404487.1\|4845225_4845861_-	formate dehydrogenase cytochrome b556 subunit	NA	NA	NA	NA
WP_000331377.1\|4845857_4846760_-	formate dehydrogenase O subunit beta	NA	NA	NA	NA
WP_077697102.1\|4846772_4849823_-	formate dehydrogenase-N subunit alpha	A0A077SK27	Escherichia_phage	1.1e-07	23.8
WP_025404488.1\|4850016_4850850_+	formate dehydrogenase accessory sulfurtransferase FdhD	NA	NA	NA	NA
WP_001400645.1\|4851002_4852058_+	YiiG family protein	NA	NA	NA	NA
WP_000931324.1\|4852107_4853856_-	PTS transporter subunit EIIA	NA	NA	NA	NA
WP_001019458.1\|4853855_4854926_-	aminopeptidase	NA	NA	NA	NA
WP_025404489.1\|4854915_4856367_-	PTS fructose-like transporter subunit IIBC	NA	NA	NA	NA
WP_000729614.1\|4856377_4856824_-	PTS fructose transporter subunit IIA	NA	NA	NA	NA
WP_000749945.1\|4857301_4858696_+	carbohydrate porin	NA	NA	NA	NA
WP_000619508.1\|4858736_4859051_-	L-rhamnose mutarotase	NA	NA	NA	NA
WP_001179715.1\|4859060_4859885_-	rhamnulose-1-phosphate aldolase	NA	NA	NA	NA
WP_000211504.1\|4860151_4861411_-	L-rhamnose isomerase	NA	NA	NA	NA
WP_000144078.1\|4861407_4862877_-	rhamnulokinase	NA	NA	NA	NA
WP_000217141.1\|4863164_4864001_+	HTH-type transcriptional activator RhaS	NA	NA	NA	NA
WP_001362440.1\|4863984_4864923_+	HTH-type transcriptional activator RhaR	NA	NA	NA	NA
WP_000063507.1\|4864919_4865954_-	L-rhamnose/proton symporter RhaT	NA	NA	NA	NA
WP_001297064.1\|4866238_4866859_+	superoxide dismutase [Mn]	Q56AR7	Bacillus_thuringiensis_phage	4.9e-64	59.8
WP_022581810.1\|4867118_4868102_+	2-keto-3-deoxygluconate transporter	NA	NA	NA	NA
WP_001270249.1\|4868250_4868925_+	6-N-hydroxylaminopurine resistance protein	NA	NA	NA	NA
WP_000580424.1\|4869040_4870414_-	envelope stress sensor histidine kinase CpxA	W8CYF6	Bacillus_phage	3.8e-16	26.2
WP_001033722.1\|4870410_4871109_-	envelope stress response regulator transcription factor CpxR	Q6XM27	Feldmannia_irregularis_virus	5.3e-06	30.3
WP_001223800.1\|4871258_4871759_+	cell-envelope stress modulator CpxP	NA	NA	NA	NA
4871783:4871829	attL	NA	NA	NA	NA
WP_000023384.1\|4871944_4872925_-\|integrase	tyrosine-type recombinase/integrase	U5N0A8	Enterobacteria_phage	4.7e-186	100.0
WP_001192857.1\|4872994_4873288_-	helix-turn-helix domain-containing protein	Q1JS45	Enterobacteria_phage	1.0e-48	100.0
WP_000453534.1\|4873440_4873713_+	hypothetical protein	Q1JS44	Enterobacteria_phage	1.5e-46	100.0
WP_000217670.1\|4873882_4874383_+	hypothetical protein	M1SV55	Escherichia_phage	2.6e-92	100.0
WP_000557703.1\|4874446_4874671_+	DUF2732 family protein	S4TP68	Salmonella_phage	4.7e-33	100.0
WP_001277898.1\|4874670_4874970_+	DUF5405 family protein	S4TUD1	Salmonella_phage	3.2e-45	99.0
WP_001113264.1\|4874972_4875197_+	TraR/DksA family transcriptional regulator	S4TRY6	Salmonella_phage	2.9e-35	100.0
WP_000027676.1\|4875193_4875469_+	DUF5405 family protein	U5N3W1	Enterobacteria_phage	8.6e-45	98.9
WP_000268590.1\|4875458_4877765_+	replication endonuclease	Q858T4	Yersinia_virus	0.0e+00	97.4
WP_029594353.1\|4877743_4878196_+	DUF3850 domain-containing protein	Q2P9X4	Enterobacteria_phage	3.0e-79	96.0
WP_001540306.1\|4878680_4879619_+	DNA cytosine methyltransferase	Q7Y4B5	Escherichia_virus	7.2e-184	97.8
WP_000688782.1\|4879619_4880612_-	hypothetical protein	NA	NA	NA	NA
WP_000140373.1\|4880598_4881717_-	ParB N-terminal domain-containing protein	Q858T2	Yersinia_virus	5.8e-172	99.7
WP_000038178.1\|4882092_4883127_-\|portal	phage portal protein	Q858W8	Yersinia_virus	9.3e-201	99.4
WP_000156875.1\|4883126_4884899_-\|terminase	terminase ATPase subunit family protein	A0A0F7LCK3	Escherichia_phage	0.0e+00	99.8
WP_001085958.1\|4885072_4885927_+\|capsid	GPO family capsid scaffolding protein	Q94MB7	Escherichia_virus	3.4e-140	89.8
WP_001248561.1\|4885985_4887059_+\|capsid	phage major capsid protein, P2 family	Q778Y7	Enterobacteria_phage	1.5e-201	99.7
WP_000203465.1\|4887062_4887806_+\|terminase	terminase endonuclease subunit	Q858W5	Yersinia_virus	1.9e-123	97.2
WP_000988633.1\|4887905_4888415_+\|head	head completion/stabilization protein	U5N0S3	Enterobacteria_phage	1.1e-90	100.0
WP_000846409.1\|4888414_4888618_+\|tail	tail protein X	A0A0F7LCN2	Escherichia_phage	3.0e-31	100.0
WP_000123124.1\|4888621_4888903_+\|holin	holin	A0A0F7LDF8	Escherichia_phage	3.7e-43	100.0
WP_001144101.1\|4888902_4889400_+	glycoside hydrolase family 104 protein	A0A0F7LBS0	Escherichia_phage	3.1e-93	100.0
WP_000736594.1\|4889414_4889840_+	protein lysA	A0A0F7LBP4	Escherichia_phage	2.5e-59	96.5
WP_000040677.1\|4889827_4890271_+\|lysis	LysB family phage lysis regulatory protein	U5N3W5	Enterobacteria_phage	4.1e-65	95.0
WP_000917157.1\|4890360_4890828_+\|tail	phage tail protein	U5N0S7	Enterobacteria_phage	3.3e-81	97.4
WP_001001792.1\|4890820_4891273_+	phage virion morphogenesis protein	A0A0F7LDR6	Escherichia_phage	9.1e-76	98.7
WP_000255497.1\|4891344_4892130_-	hypothetical protein	NA	NA	NA	NA
WP_001093705.1\|4892213_4892849_+\|plate	phage baseplate assembly protein V	U5N3F0	Enterobacteria_phage	1.2e-113	99.5
WP_000127173.1\|4892845_4893193_+\|plate	baseplate assembly protein W	A0A0F7L9X3	Escherichia_phage	8.5e-58	99.1
WP_001121506.1\|4893197_4894106_+\|plate	baseplate assembly protein	U5N3T9	Enterobacteria_phage	4.8e-161	99.0
WP_001285314.1\|4894098_4894629_+\|tail	phage tail protein I	A0A0F7LDF3	Escherichia_phage	1.0e-102	100.0
WP_000104679.1\|4894639_4896568_+	hypothetical protein	U5N099	Enterobacteria_phage	6.6e-224	71.2
WP_000930007.1\|4896536_4897100_+\|tail	tail fiber assembly protein	Q858V3	Yersinia_virus	1.9e-86	93.6
WP_000796111.1\|4897351_4898419_-	SMEK domain-containing protein	NA	NA	NA	NA
WP_001286678.1\|4898752_4899943_+\|tail	phage tail sheath protein	A0A0F7LBW9	Escherichia_phage	2.6e-223	99.2
WP_001251408.1\|4899955_4900474_+\|tail	phage major tail tube protein	A0A0F7LDZ1	Escherichia_phage	1.4e-93	100.0
WP_001031303.1\|4900530_4900806_+\|tail	phage tail assembly protein	A0A0F7LDQ8	Escherichia_phage	5.7e-41	100.0
WP_000785970.1\|4900838_4900958_+\|tail	GpE family phage tail protein	A0A0F7LCR6	Escherichia_phage	1.0e-15	100.0
WP_000069943.1\|4900950_4903398_+\|tail	phage tail tape measure protein	Q858U7	Yersinia_virus	0.0e+00	95.2
WP_000978881.1\|4903412_4903892_+\|tail	phage tail protein	O64315	Escherichia_phage	4.3e-84	98.7
WP_000887624.1\|4903891_4905055_+	phage late control D family protein	Q858U5	Yersinia_virus	2.0e-204	98.7
WP_000468308.1\|4905135_4905354_+	prophage transcriptional regulator OgrK	A0A0F7LDQ9	Escherichia_phage	4.7e-38	100.0
WP_001076742.1\|4905589_4906492_+	CDF family cation-efflux transporter FieF	NA	NA	NA	NA
4905465:4905511	attR	NA	NA	NA	NA
WP_000591795.1\|4906672_4907635_+	6-phosphofructokinase	NA	NA	NA	NA
WP_001045689.1\|4907953_4908943_+	sulfate/thiosulfate ABC transporter substrate-binding protein Sbp	NA	NA	NA	NA
WP_000708998.1\|4909049_4909805_+	CDP-diacylglycerol diphosphatase	NA	NA	NA	NA
WP_001216325.1\|4909859_4910627_-	triose-phosphate isomerase	NA	NA	NA	NA
WP_000802226.1\|4910734_4911334_-	YiiQ family protein	NA	NA	NA	NA
WP_000155257.1\|4911434_4911875_+	DUF805 domain-containing protein	NA	NA	NA	NA
WP_000655983.1\|4912086_4912386_+	DUF406 domain-containing protein	NA	NA	NA	NA
WP_000323555.1\|4912412_4912841_+	universal stress protein UspD	NA	NA	NA	NA
WP_000796310.1\|4912845_4913592_-	ferredoxin--NADP(+) reductase	NA	NA	NA	NA
WP_001250650.1\|4913688_4914699_-	class II fructose-bisphosphatase	NA	NA	NA	NA
WP_000136788.1\|4914928_4916437_-	glycerol kinase GlpK	NA	NA	NA	NA
WP_000084268.1\|4916459_4917305_-	glycerol uptake facilitator protein GlpF	M1HWZ0	Paramecium_bursaria_Chlorella_virus	4.4e-15	28.0
WP_001296623.1\|4917730_4917976_+	septal ring assembly protein ZapB	NA	NA	NA	NA
WP_000232687.1\|4918014_4918641_-	hypothetical protein	NA	NA	NA	NA
WP_024221530.1\|4918763_4919438_-	hypothetical protein	NA	NA	NA	NA
WP_000872908.1\|4919497_4919983_-	ribonuclease E activity regulator RraA	NA	NA	NA	NA
WP_001308187.1\|4920075_4921002_-	1,4-dihydroxy-2-naphthoate polyprenyltransferase	NA	NA	NA	NA
WP_001293341.1\|4921068_4922400_-	HslU--HslV peptidase ATPase subunit	A0A191ZC11	Erwinia_phage	1.7e-45	29.9
WP_000208242.1\|4922409_4922940_-\|protease	ATP-dependent protease subunit HslV	NA	NA	NA	NA

DBSCAN-SWA_18

5073676 : 5124118

Enterobacteria_phage(35.19%)

tail,tRNA,head,holin,transposase,terminase,capsid,integrase

attL 5080412:5080426|attR 5121301:5121315

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000956557.1\|5073676_5074210_+	hypothetical protein	K7PKJ4	Enterobacteria_phage	1.1e-99	100.0
WP_001093917.1\|5074627_5074909_-	hypothetical protein	K7PGU0	Enterobacteria_phage	2.8e-43	96.8
WP_001061344.1\|5074945_5075518_-	3'-5' exoribonuclease	K7PLW7	Enterobacteria_phage	3.5e-109	98.9
WP_000145667.1\|5075821_5076310_-	class I SAM-dependent methyltransferase	H9C170	Pectobacterium_phage	1.1e-66	76.2
WP_001242734.1\|5076306_5076828_-	hypothetical protein	A0A0P0ZFU9	Escherichia_phage	3.5e-63	91.0
WP_000336726.1\|5077299_5078118_-\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	1.2e-65	45.2
WP_000088311.1\|5078153_5078456_-\|transposase	transposase	NA	NA	NA	NA
WP_000081283.1\|5078750_5079575_-	DUF2303 family protein	U5P439	Shigella_phage	3.9e-149	99.6
WP_000135681.1\|5079640_5080003_-	hypothetical protein	Q8SBF8	Shigella_phage	7.3e-60	99.2
5080412:5080426	attL	NA	NA	NA	NA
WP_000859462.1\|5080669_5081344_-	LexA family transcriptional repressor	Q8SBF6	Shigella_phage	1.2e-132	100.0
WP_000649477.1\|5081434_5081635_+	transcriptional regulator	U5P445	Shigella_phage	7.9e-32	100.0
WP_000521508.1\|5081678_5082230_+	hypothetical protein	A0A291AWW8	Escherichia_phage	4.5e-101	100.0
WP_001087342.1\|5082226_5083378_+	peptidase	K7PLX4	Enterobacteria_phage	6.9e-205	96.3
WP_000620696.1\|5083374_5083599_+	hypothetical protein	A5LH70	Enterobacteria_phage	5.7e-39	100.0
WP_000061518.1\|5083595_5084414_+	helix-turn-helix domain-containing protein	A0A291AWW0	Escherichia_phage	1.1e-122	99.3
WP_001447903.1\|5084410_5084905_+	PerC family transcriptional regulator	A0A0P0ZCF0	Stx2-converting_phage	1.3e-83	96.3
WP_001341555.1\|5084904_5085558_+	phage N-6-adenine-methyltransferase	A5LH72	Enterobacteria_phage	3.3e-127	99.1
WP_000210170.1\|5085554_5085881_+	LexA family transcriptional regulator	A0A291AWY9	Escherichia_phage	5.4e-54	100.0
WP_023277891.1\|5085877_5086267_+	RusA family crossover junction endodeoxyribonuclease	A5LH74	Enterobacteria_phage	7.8e-68	98.4
WP_025404492.1\|5086286_5087096_+	KilA-N domain-containing protein	Q8SBE6	Shigella_phage	1.3e-149	97.4
WP_001428967.1\|5087103_5088093_+	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	1.2e-192	98.8
WP_001047129.1\|5088106_5088859_+	antitermination protein	K7PGU5	Enterobacteria_phage	7.6e-136	98.8
WP_001339373.1\|5089168_5089321_+	restriction endonuclease subunit M	A0A2R2Z327	Escherichia_phage	3.4e-19	98.0
WP_025404493.1\|5090138_5091989_+	SASA family carbohydrate esterase	B6DZ89	Enterobacteria_phage	0.0e+00	97.6
WP_000411802.1\|5092434_5092641_+\|holin	holin	A0A0P0ZC45	Stx2-converting_phage	2.4e-31	100.0
WP_000075132.1\|5092640_5093138_+	lysozyme RrrD	A0A0N7KZA0	Stx2-converting_phage	2.6e-92	100.0
WP_001208681.1\|5093354_5093540_+	membrane protein	A0A1U9AJA4	Stx1_converting_phage	2.9e-20	78.7
WP_001303878.1\|5094067_5094382_+	PerC family transcriptional regulator	NA	NA	NA	NA
WP_032321890.1\|5094463_5094688_-	YlcI/YnfO family protein	A0A0K2FIR8	Escherichia_phage	7.8e-20	90.6
WP_000279796.1\|5094729_5095095_+	HNH endonuclease	B6ETE5	Enterobacteria_phage	3.1e-66	100.0
WP_025404316.1\|5095390_5095954_+\|terminase	terminase small subunit	B6DZ97	Enterobacteria_phage	1.4e-81	93.0
WP_025404494.1\|5095950_5097297_+\|terminase	terminase large subunit	H6WZK9	Escherichia_phage	2.5e-246	79.4
WP_025404495.1\|5097360_5099298_+\|capsid	phage major capsid protein	A0A0P0ZCT9	Stx2-converting_phage	0.0e+00	98.6
WP_001063027.1\|5099342_5099564_+	hypothetical protein	H6WZL1	Escherichia_phage	9.9e-36	98.6
WP_000125968.1\|5101928_5102255_+\|head,tail	phage gp6-like head-tail connector protein	B6ETF0	Enterobacteria_phage	2.7e-53	98.1
WP_001007905.1\|5102265_5102616_+\|head	phage head closure protein	A0A0P0ZB28	Stx2-converting_phage	1.6e-59	100.0
WP_000573374.1\|5102612_5103059_+	HK97 gp10 family phage protein	A0A0P0ZCD2	Stx2-converting_phage	8.1e-77	100.0
WP_000133391.1\|5103055_5103400_+	DUF3168 domain-containing protein	A0A0P0ZC17	Stx2-converting_phage	9.4e-57	99.1
WP_001275505.1\|5103458_5104175_+	hypothetical protein	A0A0P0ZD29	Stx2-converting_phage	5.2e-126	97.5
WP_001030047.1\|5104180_5104555_+\|tail	tail assembly protein	A0A0P0ZE84	Stx2-converting_phage	5.8e-60	92.7
WP_122994012.1\|5104650_5104860_+	DUF4035 domain-containing protein	A0A0P0ZED8	Stx2-converting_phage	7.4e-33	98.6
WP_025404497.1\|5104907_5108150_+\|tail	phage tail tape measure protein	A0A0P0ZCJ4	Stx2-converting_phage	0.0e+00	96.9
WP_000807964.1\|5108142_5108484_+\|tail	phage tail protein	A0A0P0ZCS8	Stx2-converting_phage	8.7e-63	100.0
WP_025404498.1\|5108483_5109182_+\|tail	phage minor tail protein L	A0A0P0ZBE3	Stx2-converting_phage	8.9e-131	98.3
WP_025404499.1\|5109187_5109931_+\|tail	phage tail protein	Q6H9T4	Enterobacteria_phage	2.1e-146	96.0
WP_064761467.1\|5109876_5110506_+\|tail	tail assembly protein	A0A0P0ZC16	Stx2-converting_phage	1.2e-102	98.6
WP_162149718.1\|5110751_5111720_+	host specificity protein J	Q6H9T2	Enterobacteria_phage	7.7e-181	97.2
WP_113706121.1\|5112252_5113737_+	host specificity protein J	Q6H9T2	Enterobacteria_phage	2.4e-266	96.8
WP_001216290.1\|5113805_5114429_+	Ail/Lom family outer membrane beta-barrel protein	A0A1U8QHD6	Enterobacteria_phage	1.1e-68	60.4
WP_025404500.1\|5114493_5115807_+\|tail	tail fiber protein	Q9EYE8	Enterobacteria_phage	6.9e-76	98.9
WP_001023407.1\|5115808_5116078_+\|tail	phage tail protein	H6WZN0	Escherichia_phage	1.4e-44	98.9
WP_001370116.1\|5116487_5117093_+	hypothetical protein	A0A0P0ZCT1	Stx2-converting_phage	1.8e-111	99.5
WP_001121225.1\|5117317_5117968_-	DUF1076 domain-containing protein	B6ETE1	Enterobacteria_phage	1.2e-121	99.1
WP_001217539.1\|5118561_5118810_-	DinI family protein	A5LH55	Enterobacteria_phage	1.1e-38	100.0
WP_000332271.1\|5118871_5119969_-\|integrase	site-specific integrase	S5MDN5	Escherichia_phage	9.5e-212	99.7
WP_025404501.1\|5120057_5121095_+\|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	NA	NA	NA	NA
WP_000891400.1\|5121228_5121471_+	envelope stress response protein PspG	NA	NA	NA	NA
5121301:5121315	attR	NA	NA	NA	NA
WP_000235513.1\|5121636_5122620_-	quinone oxidoreductase	NA	NA	NA	NA
WP_000918363.1\|5122702_5124118_+	replicative DNA helicase	O80281	Escherichia_phage	4.8e-200	78.3

DBSCAN-SWA_19

5520928 : 5553374

Enterobacteria_phage(67.86%)

tail,portal,protease,terminase,integrase

attL 5520130:5520144|attR 5533060:5533074

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
5520130:5520144	attL	NA	NA	NA	NA
WP_001218292.1\|5520928_5522152_+\|integrase	site-specific integrase	A0A291AWU1	Escherichia_phage	1.2e-234	98.5
WP_000059336.1\|5522252_5522705_+	hypothetical protein	NA	NA	NA	NA
WP_000542348.1\|5522746_5523229_+	hypothetical protein	NA	NA	NA	NA
WP_024221786.1\|5523518_5524115_-	DUF551 domain-containing protein	A5LH60	Enterobacteria_phage	6.1e-112	93.4
WP_000934114.1\|5525643_5527746_+\|terminase	phage terminase large subunit family protein	K7PH40	Enterobacteria_phage	0.0e+00	99.6
WP_001072975.1\|5527742_5527955_+	hypothetical protein	A5LH28	Enterobacteria_phage	1.1e-31	100.0
WP_000985947.1\|5527954_5529463_+\|portal	phage portal protein	K7PJP3	Enterobacteria_phage	1.6e-289	99.8
WP_001136588.1\|5529407_5531435_+\|protease	Clp protease ClpP	K7PGT6	Enterobacteria_phage	0.0e+00	99.7
WP_001097042.1\|5531521_5531845_+	DUF2190 family protein	K7PLV6	Enterobacteria_phage	3.2e-51	98.1
WP_001283153.1\|5531837_5532113_+	DNA breaking-rejoining protein	K7PH43	Enterobacteria_phage	2.3e-45	100.0
WP_000677102.1\|5532124_5532703_+\|tail	phage tail protein	A5LH33	Enterobacteria_phage	1.2e-101	99.5
WP_024221681.1\|5532699_5533101_+\|tail	tail protein	A0A291AWY2	Escherichia_phage	5.4e-72	98.5
5533060:5533074	attR	NA	NA	NA	NA
WP_000211121.1\|5533111_5533855_+\|tail	tail protein	A5LH35	Enterobacteria_phage	1.6e-133	100.0
WP_025404521.1\|5533915_5534302_+\|tail	phage minor tail protein G	A5LH36	Enterobacteria_phage	2.1e-65	99.2
WP_001161009.1\|5534310_5534640_+\|tail	phage tail assembly protein T	A5LH37	Enterobacteria_phage	7.6e-56	100.0
WP_000372002.1\|5534611_5537677_+\|tail	phage tail tape measure protein	A0A291AWX1	Escherichia_phage	0.0e+00	97.0
WP_000447248.1\|5537676_5538006_+\|tail	phage tail protein	A0A291AWW9	Escherichia_phage	1.7e-60	100.0
WP_001152362.1\|5538015_5538714_+\|tail	phage minor tail protein L	A5LH40	Enterobacteria_phage	1.6e-132	97.8
WP_038427005.1\|5538718_5539462_+\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	6.3e-151	98.8
WP_025380703.1\|5539359_5540007_+\|tail	tail assembly protein	A5LH42	Enterobacteria_phage	1.5e-111	97.2
WP_025380704.1\|5540067_5543466_+	host specificity protein J	K7PKJ2	Enterobacteria_phage	0.0e+00	90.7
WP_021530825.1\|5543532_5544132_+	Ail/Lom family outer membrane beta-barrel protein	A0A0P0ZCF6	Stx2-converting_phage	2.8e-109	98.0
WP_038427007.1\|5544196_5547550_+	short-chain fatty acid transporter	X2KTY7	Enterobacteria_phage	2.1e-12	37.3
WP_000885593.1\|5547549_5548125_+\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	5.0e-103	95.8
WP_000086527.1\|5548222_5548813_-	recombinase family protein	A0A0A7NPV4	Enterobacteria_phage	1.6e-24	38.8
WP_000836769.1\|5549191_5549425_-	cold shock protein YdfK	A0A192Y6D5	Salmonella_phage	6.4e-33	88.3
WP_001372053.1\|5549493_5549607_-	hypothetical protein	A0A1C9IHU6	Salmonella_phage	1.4e-06	77.8
WP_001217539.1\|5550033_5550282_-	DinI family protein	A5LH55	Enterobacteria_phage	1.1e-38	100.0
WP_000202563.1\|5550501_5552088_+	peptide chain release factor 3	D0R0F5	Streptococcus_phage	2.4e-30	25.2
WP_001295748.1\|5552480_5553086_+	molecular chaperone OsmY	NA	NA	NA	NA
WP_000490275.1\|5553212_5553374_+	DUF1328 domain-containing protein	A0A0N7CBR2	Salmonella_phage	1.8e-10	64.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP006028

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

7319 : 78610

Stx2-converting_phage(41.38%)

protease,transposase,integrase

attL 4431:4445|attR 85285:85299

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
4431:4445	attL	NA	NA	NA	NA
WP_012917688.1\|7319_8858_-\|transposase	IS66 family transposase	A0A0P0ZBS5	Stx2-converting_phage	1.9e-295	98.8
WP_000612591.1\|8907_9255_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	2.2e-61	100.0
WP_000091308.1\|9491_9857_+	hypothetical protein	NA	NA	NA	NA
WP_000937603.1\|9856_11044_+\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_012917687.1\|11322_12891_-\|transposase	IS66 family transposase	A0A0P0ZBS5	Stx2-converting_phage	1.0e-158	56.0
WP_000631725.1\|12894_13242_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	9.2e-44	72.9
WP_025404525.1\|13238_13913_-	IS66 family insertion sequence hypothetical protein	A0A0P0ZCV4	Stx2-converting_phage	4.7e-12	30.8
WP_001341442.1\|13966_14194_-\|transposase	transposase	B6DZU5	Stx2-converting_phage	6.2e-33	100.0
WP_000361610.1\|14356_15334_-	RepB family plasmid replication initiator protein	J9Q7H0	Salmonella_phage	1.4e-100	59.2
WP_113706123.1\|16139_17352_+\|transposase	IS3 family transposase	A0A0N7C1X7	Escherichia_phage	1.3e-166	98.3
WP_032162148.1\|17392_17590_-	hypothetical protein	Q7Y2I5	Escherichia_phage	6.4e-26	93.8
WP_001130313.1\|17583_17832_+\|transposase	IS3 family transposase	A0A0N7C035	Escherichia_phage	5.6e-27	87.9
WP_001341451.1\|17816_18041_+\|transposase	IS3 family transposase	A0A0N7C1X7	Escherichia_phage	2.7e-28	91.4
WP_000445934.1\|18105_18501_-	plasmid stabilization protein	NA	NA	NA	NA
WP_000921957.1\|18500_19460_-	plasmid stabilization protein	A0A222YXF2	Escherichia_phage	5.4e-62	40.9
WP_077249722.1\|19732_20635_+	DUF1281 domain-containing protein	NA	NA	NA	NA
WP_012680995.1\|20631_20943_+	hypothetical protein	NA	NA	NA	NA
WP_000086167.1\|21018_21702_+	DNA methylase	A0A2I7RE86	Vibrio_phage	1.3e-28	37.4
WP_001443814.1\|21701_21920_+	hypothetical protein	NA	NA	NA	NA
WP_000274418.1\|21931_22366_+	DUF1380 domain-containing protein	NA	NA	NA	NA
WP_001341455.1\|22410_22893_+	conjugation system SOS inhibitor PsiB	NA	NA	NA	NA
WP_001276261.1\|22889_23609_+	plasmid SOS inhibition protein A	NA	NA	NA	NA
WP_032313270.1\|23885_24203_+	hypothetical protein	A0A0N7KZV3	Escherichia_phage	4.5e-05	55.8
WP_000117628.1\|24664_25165_+	antirestriction protein ArdA	NA	NA	NA	NA
WP_162137195.1\|25166_25787_-	hypothetical protein	NA	NA	NA	NA
WP_000218854.1\|25892_26327_+	hypothetical protein	NA	NA	NA	NA
WP_001247865.1\|26419_26686_+	hypothetical protein	NA	NA	NA	NA
WP_000038351.1\|26750_27641_+\|transposase	Rpn family recombination-promoting nuclease/putative transposase	Q2A0A7	Sodalis_phage	4.4e-66	53.8
WP_077776889.1\|27664_27886_+	hypothetical protein	NA	NA	NA	NA
WP_000148286.1\|27916_28168_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_001341408.1\|28746_29595_+	DUF4942 domain-containing protein	NA	NA	NA	NA
WP_000157095.1\|29680_30016_-	molybdopterin-guanine dinucleotide biosynthesis protein MobC	NA	NA	NA	NA
WP_001291056.1\|30247_30580_+	hypothetical protein	NA	NA	NA	NA
WP_000991402.1\|30591_33312_+	relaxase/mobilization nuclease domain-containing protein	NA	NA	NA	NA
WP_001341409.1\|33532_33853_-	hypothetical protein	NA	NA	NA	NA
WP_000088311.1\|33891_34194_+\|transposase	transposase	Q716C1	Shigella_phage	1.1e-05	31.3
WP_113706124.1\|34620_35834_-\|transposase	IS3 family transposase	Q6H9S3	Enterobacteria_phage	1.6e-164	97.3
WP_136138333.1\|35832_36246_+	DUF1449 family protein	NA	NA	NA	NA
WP_000112000.1\|36544_36802_+	hypothetical protein	NA	NA	NA	NA
WP_001034100.1\|37049_40952_-\|protease	serine protease autotransporter EspP	Q9LA58	Enterobacterial_phage	9.5e-238	40.4
WP_136139077.1\|41889_42309_-	DUF1449 family protein	NA	NA	NA	NA
WP_001341423.1\|42239_42914_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZCV4	Stx2-converting_phage	4.7e-12	30.8
WP_000631725.1\|42910_43258_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	9.2e-44	72.9
WP_012917687.1\|43261_44830_+\|transposase	IS66 family transposase	A0A0P0ZBS5	Stx2-converting_phage	1.0e-158	56.0
WP_000091308.1\|45653_46019_+	hypothetical protein	NA	NA	NA	NA
WP_000937603.1\|46018_47206_+\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_000422675.1\|51200_51677_+	IS66 family insertion sequence hypothetical protein	Q6H9S5	Enterobacteria_phage	3.0e-45	90.7
WP_001443774.1\|54803_55034_+\|transposase	transposase	NA	NA	NA	NA
WP_000581688.1\|55148_64649_+	toxin B	NA	NA	NA	NA
WP_000907857.1\|65608_66640_-	replication initiation protein	NA	NA	NA	NA
WP_000335839.1\|67348_67990_+	transcription termination factor NusG	NA	NA	NA	NA
WP_025404528.1\|68130_68796_+	hypothetical protein	NA	NA	NA	NA
WP_012917687.1\|69455_71024_-\|transposase	IS66 family transposase	A0A0P0ZBS5	Stx2-converting_phage	1.0e-158	56.0
WP_000631725.1\|71027_71375_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	9.2e-44	72.9
WP_001341423.1\|71371_72046_-	IS66 family insertion sequence hypothetical protein	A0A0P0ZCV4	Stx2-converting_phage	4.7e-12	30.8
WP_001066949.1\|72099_72486_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_000704534.1\|72613_73474_+	alpha/beta hydrolase	A2RQC8	Archaeal_BJ1_virus	1.3e-09	23.5
WP_157776129.1\|73962_74238_+	hypothetical protein	NA	NA	NA	NA
WP_000336726.1\|74278_75097_-\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	1.2e-65	45.2
WP_000088311.1\|75132_75435_-\|transposase	transposase	Q716C1	Shigella_phage	1.1e-05	31.3
WP_001165114.1\|75502_76048_+	hypothetical protein	NA	NA	NA	NA
WP_001044768.1\|76209_76626_-	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA
WP_001261287.1\|76622_76853_-	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA
WP_000465041.1\|77412_77826_+	hypothetical protein	NA	NA	NA	NA
WP_001164205.1\|77827_78610_+\|integrase	phage integrase family protein	I3WFA4	Macacine_betaherpesvirus	1.2e-54	97.3
85285:85299	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_CP006029

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

12678 : 45830

Escherichia_phage(30.77%)

integrase,transposase

attL 6221:6240|attR 28422:28441

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
6221:6240	attL	NA	NA	NA	NA
WP_113706125.1\|12678_13892_-\|transposase	IS3 family transposase	H6WZH1	Escherichia_phage	7.1e-168	99.7
WP_000811656.1\|14290_15802_-	ATP-dependent helicase	A0A2D1GN12	Pseudoalteromonas_phage	3.6e-44	30.7
WP_000101568.1\|16088_17129_-	DNA-binding protein	NA	NA	NA	NA
WP_001097010.1\|17290_18166_-	DNA replication terminus site-binding protein	NA	NA	NA	NA
WP_162149453.1\|18315_18477_+	hypothetical protein	NA	NA	NA	NA
WP_000139717.1\|18522_19014_-	hypothetical protein	NA	NA	NA	NA
WP_012728230.1\|19010_19880_-	3'-5' exonuclease	A0A1S6L012	Salmonella_phage	3.5e-23	35.1
WP_000543934.1\|19884_20895_-\|integrase	tyrosine-type recombinase/integrase	A0A0K0N6I5	Gordonia_phage	3.1e-07	31.9
WP_000949433.1\|20897_21434_-	hypothetical protein	NA	NA	NA	NA
WP_000575657.1\|21732_22014_-	hypothetical protein	NA	NA	NA	NA
WP_001067858.1\|22611_23316_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.2e-138	99.6
WP_000268552.1\|23535_24192_-	hypothetical protein	NA	NA	NA	NA
WP_000936897.1\|24191_25619_-	DNA cytosine methyltransferase	NA	NA	NA	NA
WP_000647188.1\|25622_26123_-	hypothetical protein	I3UMJ0	Colwellia_phage	9.5e-18	38.4
WP_001447539.1\|26131_26443_-	hypothetical protein	NA	NA	NA	NA
WP_001326170.1\|26448_26880_-	hypothetical protein	NA	NA	NA	NA
WP_000344149.1\|26947_27622_-	hypothetical protein	NA	NA	NA	NA
WP_014342216.1\|27608_27728_+	hypothetical protein	NA	NA	NA	NA
WP_001125904.1\|27870_28248_-	hypothetical protein	A0A2H4P7P5	Pseudomonas_phage	1.7e-22	49.6
WP_000939033.1\|28574_28718_+	hypothetical protein	NA	NA	NA	NA
28422:28441	attR	NA	NA	NA	NA
WP_000074431.1\|28809_29445_+	N-6 DNA methylase	NA	NA	NA	NA
WP_000703827.1\|29497_29770_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_001207227.1\|29818_31000_-	ParB/RepB/Spo0J family partition protein	I3NLC2	Bifidobacterium_phage	2.4e-11	28.7
WP_001151304.1\|31003_31789_-	ParA family protein	A0A1X9IGI7	Lactococcus_phage	6.1e-11	26.4
WP_014342215.1\|31816_31948_+	hypothetical protein	NA	NA	NA	NA
WP_000338945.1\|31962_32274_-	hypothetical protein	NA	NA	NA	NA
WP_001043260.1\|32580_33396_+	sulfonamide-resistant dihydropteroate synthase Sul2	A0A0B5J4J5	Pandoravirus	5.9e-09	27.6
WP_001082319.1\|33456_34260_+	aminoglycoside O-phosphotransferase APH(3'')-Ib	NA	NA	NA	NA
WP_000480968.1\|34259_35096_+	aminoglycoside O-phosphotransferase APH(6)-Id	NA	NA	NA	NA
WP_000844627.1\|35401_35644_+\|transposase	transposase	NA	NA	NA	NA
WP_000164043.1\|35675_36326_-	tetracycline resistance transcriptional repressor TetR(A)	NA	NA	NA	NA
WP_000804063.1\|36431_37631_+	tetracycline efflux MFS transporter Tet(A)	NA	NA	NA	NA
WP_001255015.1\|37897_38203_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_012728216.1\|38230_39445_-	chloramphenicol/florfenicol efflux MFS transporter FloR	S4TR35	Salmonella_phage	5.5e-19	28.7
WP_012728215.1\|39661_40546_-	DUF3363 domain-containing protein	NA	NA	NA	NA
WP_001120888.1\|40576_42070_-\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_000743213.1\|42280_42505_-	hypothetical protein	NA	NA	NA	NA
WP_001366550.1\|42501_43239_-	recombinase family protein	NA	NA	NA	NA
WP_001044210.1\|43724_43865_-	hypothetical protein	NA	NA	NA	NA
WP_001067855.1\|43870_44575_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_001067855.1\|45125_45830_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP006027

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CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP006028

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. NZ_CP006029

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection