1. spacer 2.8|818412|36|NZ_CP006954|CRISPRCasFinder,CRT,PILER-CR matches to NC_028743 (Mannheimia phage vB_MhS_587AP2, complete genome) position: , mismatch: 1, identity: 0.972
atgtcgctggataagattaaggagctgggcggctat CRISPR spacer
atgccgctggataagattaaggagctgggcggctat Protospacer
***.********************************
2. spacer 2.21|819279|34|NZ_CP006954|CRISPRCasFinder,CRT,PILER-CR matches to NC_008201 (Mannheimia phage phiMHaA1, complete genome) position: , mismatch: 1, identity: 0.971
cacggcaaagtggaatttatgcaagggcatatta CRISPR spacer
cacggtaaagtggaatttatgcaagggcatatta Protospacer
*****.****************************
3. spacer 2.21|819279|34|NZ_CP006954|CRISPRCasFinder,CRT,PILER-CR matches to DQ426905 (Bacteriophage phi-MhaA1-BAA410, complete genome) position: , mismatch: 1, identity: 0.971
cacggcaaagtggaatttatgcaagggcatatta CRISPR spacer
cacggtaaagtggaatttatgcaagggcatatta Protospacer
*****.****************************
4. spacer 2.21|819279|34|NZ_CP006954|CRISPRCasFinder,CRT,PILER-CR matches to KP137432 (Mannheimia phage vB_MhM_535AP1, complete genome) position: , mismatch: 1, identity: 0.971
cacggcaaagtggaatttatgcaagggcatatta CRISPR spacer
cacggtaaagtggaatttatgcaagggcatatta Protospacer
*****.****************************
5. spacer 2.21|819279|34|NZ_CP006954|CRISPRCasFinder,CRT,PILER-CR matches to JN255163 (Mannheimia phage vB_MhM_1152AP, complete genome) position: , mismatch: 1, identity: 0.971
cacggcaaagtggaatttatgcaagggcatatta CRISPR spacer
cacggtaaagtggaatttatgcaagggcatatta Protospacer
*****.****************************
6. spacer 2.21|819279|34|NZ_CP006954|CRISPRCasFinder,CRT,PILER-CR matches to KP137438 (Mannheimia phage vB_MhM_2256AP1, complete genome) position: , mismatch: 1, identity: 0.971
cacggcaaagtggaatttatgcaagggcatatta CRISPR spacer
cacggtaaagtggaatttatgcaagggcatatta Protospacer
*****.****************************
7. spacer 2.21|819279|34|NZ_CP006954|CRISPRCasFinder,CRT,PILER-CR matches to NC_047750 (Mannheimia phage vB_MhM_1127AP1, complete genome) position: , mismatch: 1, identity: 0.971
cacggcaaagtggaatttatgcaagggcatatta CRISPR spacer
cacggtaaagtggaatttatgcaagggcatatta Protospacer
*****.****************************
8. spacer 2.21|819279|34|NZ_CP006954|CRISPRCasFinder,CRT,PILER-CR matches to NC_028898 (Mannheimia phage vB_MhM_587AP1, complete genome) position: , mismatch: 1, identity: 0.971
cacggcaaagtggaatttatgcaagggcatatta CRISPR spacer
cacggtaaagtggaatttatgcaagggcatatta Protospacer
*****.****************************
9. spacer 2.21|819279|34|NZ_CP006954|CRISPRCasFinder,CRT,PILER-CR matches to DQ426904 (Bacteriophage phi-MhaA1-PHL101, complete genome) position: , mismatch: 1, identity: 0.971
cacggcaaagtggaatttatgcaagggcatatta CRISPR spacer
cacggtaaagtggaatttatgcaagggcatatta Protospacer
*****.****************************
10. spacer 3.5|1425350|33|NZ_CP006954|CRT matches to NZ_CP054197 (Glaesserella parasuis strain YHP170504 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.97
ttaatggttttgcataccgttaccccctcaagt CRISPR spacer
ttaatggttttgcataccgttaccccctcaagc Protospacer
********************************.
11. spacer 4.6|1531340|30|NZ_CP006954|PILER-CR,CRISPRCasFinder,CRT matches to NC_007206 (Haemophilus influenzae biotype aegyptius plasmid pF1947, complete sequence) position: , mismatch: 2, identity: 0.933
cgttgtggttcgtggaacatctcaaagagg CRISPR spacer
cgttgtggttcgtggagcaactcaaagagg Protospacer
****************.** **********
12. spacer 3.5|1425350|33|NZ_CP006954|CRT matches to NC_021724 (Aggregatibacter actinomycetemcomitans plasmid pS23A, complete sequence) position: , mismatch: 3, identity: 0.909
ttaatggttttgcataccgttaccccctcaagt CRISPR spacer
ttaatggtttagcataccgttaccccctcattt Protospacer
********** ******************* *
13. spacer 3.5|1425350|33|NZ_CP006954|CRT matches to NC_021724 (Aggregatibacter actinomycetemcomitans plasmid pS23A, complete sequence) position: , mismatch: 3, identity: 0.909
ttaatggttttgcataccgttaccccctcaagt CRISPR spacer
ttaatggtttagcataccgttaccccctcattt Protospacer
********** ******************* *
14. spacer 3.5|1425350|33|NZ_CP006954|CRT matches to GQ866235 (Aggregatibacter actinomycetemcomitans strain D11S-1 plasmid S57, complete sequence) position: , mismatch: 3, identity: 0.909
ttaatggttttgcataccgttaccccctcaagt CRISPR spacer
ttaatggtttagcataccgttaccccctcattt Protospacer
********** ******************* *
15. spacer 3.5|1425350|33|NZ_CP006954|CRT matches to GQ866235 (Aggregatibacter actinomycetemcomitans strain D11S-1 plasmid S57, complete sequence) position: , mismatch: 3, identity: 0.909
ttaatggttttgcataccgttaccccctcaagt CRISPR spacer
ttaatggtttagcataccgttaccccctcattt Protospacer
********** ******************* *
16. spacer 3.5|1425350|33|NZ_CP006954|CRT matches to NC_002579 (Aggregatibacter actinomycetemcomitans plasmid pVT745, complete sequence) position: , mismatch: 3, identity: 0.909
ttaatggttttgcataccgttaccccctcaagt CRISPR spacer
ttaatggtttagcataccgttaccccctcattt Protospacer
********** ******************* *
17. spacer 4.5|1531274|30|NZ_CP006954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054197 (Glaesserella parasuis strain YHP170504 plasmid unnamed1, complete sequence) position: , mismatch: 3, identity: 0.9
aagcaaggcaaggttgtggtacagaaaata CRISPR spacer
aggcaagacaaggttgcggtacagaaaata Protospacer
*.*****.********.*************
18. spacer 3.5|1425350|33|NZ_CP006954|CRT matches to NZ_KX753679 (Pasteurella multocida strain RCAD0259 plasmid pRCADGH-2, complete sequence) position: , mismatch: 5, identity: 0.848
ttaatggttttgcataccgttaccccctcaagt CRISPR spacer
ttaatggtttagcataccgttacccccctcatt Protospacer
********** ****************.. * *
19. spacer 3.5|1425350|33|NZ_CP006954|CRT matches to NZ_KX753679 (Pasteurella multocida strain RCAD0259 plasmid pRCADGH-2, complete sequence) position: , mismatch: 6, identity: 0.818
ttaatggttttgcataccgttaccccctcaagt CRISPR spacer
ttaatggtttagcatactgttacccccctcatt Protospacer
********** ******.*********.. * *
20. spacer 4.8|1531472|30|NZ_CP006954|PILER-CR,CRISPRCasFinder,CRT matches to MN694671 (Marine virus AFVG_250M145, complete genome) position: , mismatch: 6, identity: 0.8
ttgaatcatcaacaatcgc--ttttgattgtg CRISPR spacer
ttgaatcattaacaatctcttttttaatgg-- Protospacer
*********.******* * ****.** *
21. spacer 4.8|1531472|30|NZ_CP006954|PILER-CR,CRISPRCasFinder,CRT matches to MN694753 (Marine virus AFVG_250M144, complete genome) position: , mismatch: 6, identity: 0.8
ttgaatcatcaacaatcgc--ttttgattgtg CRISPR spacer
ttgaatcattaacaatctcttttttaatgg-- Protospacer
*********.******* * ****.** *
22. spacer 4.8|1531472|30|NZ_CP006954|PILER-CR,CRISPRCasFinder,CRT matches to MN694231 (Marine virus AFVG_250M143, complete genome) position: , mismatch: 6, identity: 0.8
ttgaatcatcaacaatcgc--ttttgattgtg CRISPR spacer
ttgaatcattaacaatctcttttttaatgg-- Protospacer
*********.******* * ****.** *
23. spacer 4.8|1531472|30|NZ_CP006954|PILER-CR,CRISPRCasFinder,CRT matches to MN693981 (Marine virus AFVG_250M146, complete genome) position: , mismatch: 6, identity: 0.8
ttgaatcatcaacaatcgc--ttttgattgtg CRISPR spacer
ttgaatcattaacaatctcttttttaatgg-- Protospacer
*********.******* * ****.** *
24. spacer 4.10|1531604|30|NZ_CP006954|PILER-CR,CRISPRCasFinder,CRT matches to MN850621 (Escherichia phage dhabil, complete genome) position: , mismatch: 6, identity: 0.8
tttcggtataactctaaatcgtcttgggtt CRISPR spacer
tgttgtaataaatctaaatcgtcttgggat Protospacer
* *.* **** **************** *
25. spacer 4.10|1531604|30|NZ_CP006954|PILER-CR,CRISPRCasFinder,CRT matches to MN850609 (Escherichia phage dhaeg, complete genome) position: , mismatch: 6, identity: 0.8
tttcggtataactctaaatcgtcttgggtt CRISPR spacer
tgttgtaataaatctaaatcgtcttgggat Protospacer
* *.* **** **************** *
26. spacer 4.8|1531472|30|NZ_CP006954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025078 (Enterococcus faecium strain LS170308 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.767
ttgaatcatcaacaatcgcttttgattgtg CRISPR spacer
ttttatcatcaacaatcacttgtgatttgt Protospacer
** *************.*** *****
27. spacer 4.8|1531472|30|NZ_CP006954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015437 (Anoxybacillus sp. B7M1 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.767
ttgaatcatcaacaatcgcttttgattgtg CRISPR spacer
ttgaatcttcaacaagcgcttttcgctctt Protospacer
******* ******* ******* ..* *
28. spacer 4.8|1531472|30|NZ_CP006954|PILER-CR,CRISPRCasFinder,CRT matches to MG969411 (UNVERIFIED: Salmonella phage GE_vB_MG, complete genome) position: , mismatch: 7, identity: 0.767
ttgaatcatcaacaatcgcttttgattgtg CRISPR spacer
tgagcttatcaacaatcgtgtttgattgtg Protospacer
* .. *.***********. **********
29. spacer 4.12|1531736|30|NZ_CP006954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KX853854 (Enterococcus faecium strain A120 plasmid pEMA120, complete sequence) position: , mismatch: 7, identity: 0.767
gaaaagcttgagatggaatttaaaatcggc CRISPR spacer
accatacttgaaatggaatttaaaattggc Protospacer
. * .*****.**************.***
30. spacer 4.12|1531736|30|NZ_CP006954|PILER-CR,CRISPRCasFinder,CRT matches to NC_016967 (Enterococcus faecium plasmid pZB18, complete sequence) position: , mismatch: 7, identity: 0.767
gaaaagcttgagatggaatttaaaatcggc CRISPR spacer
accatacttgaaatggaatttaaaattggc Protospacer
. * .*****.**************.***
31. spacer 4.12|1531736|30|NZ_CP006954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KX976485 (Enterococcus avium strain 19081 plasmid pEA19081, complete sequence) position: , mismatch: 7, identity: 0.767
gaaaagcttgagatggaatttaaaatcggc CRISPR spacer
accatacttgaaatggaatttaaaattggc Protospacer
. * .*****.**************.***
32. spacer 4.12|1531736|30|NZ_CP006954|PILER-CR,CRISPRCasFinder,CRT matches to MG592433 (Vibrio phage 1.052.A._10N.286.46.C3, partial genome) position: , mismatch: 7, identity: 0.767
gaaaagcttgagatggaatttaaaatcggc CRISPR spacer
caaaagctttagatggaattttaaggaggg Protospacer
******** *********** **. **
33. spacer 2.9|818480|37|NZ_CP006954|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP045223 (Achromobacter xylosoxidans strain DN002 plasmid unnamed) position: , mismatch: 8, identity: 0.784
gtttagctgt---gaccgatacaccggcaagtctcggcac CRISPR spacer
---aggccgtccagaccgatacaccggcaattctcgccac Protospacer
.**.** ***************** ***** ***
34. spacer 2.23|819414|34|NZ_CP006954|CRISPRCasFinder,CRT,PILER-CR matches to MN694439 (Marine virus AFVG_250M296, complete genome) position: , mismatch: 8, identity: 0.765
gcaacgtcttttattctttctttataattgctta CRISPR spacer
tcaacatcttttattctttctttagaaattttac Protospacer
****.****************** ** * .*
35. spacer 2.23|819414|34|NZ_CP006954|CRISPRCasFinder,CRT,PILER-CR matches to MN694282 (Marine virus AFVG_250M297, complete genome) position: , mismatch: 8, identity: 0.765
gcaacgtcttttattctttctttataattgctta CRISPR spacer
tcaacatcttttattctttctttagaaattttac Protospacer
****.****************** ** * .*
36. spacer 2.23|819414|34|NZ_CP006954|CRISPRCasFinder,CRT,PILER-CR matches to GQ443085 (Clostridium phage CP26F, complete genome) position: , mismatch: 8, identity: 0.765
gcaacgtcttttattctttctttataattgctta CRISPR spacer
acaacttcttttgttctttctttataccttctct Protospacer
.**** ******.************* .* **.
37. spacer 2.23|819414|34|NZ_CP006954|CRISPRCasFinder,CRT,PILER-CR matches to JF767210 (Clostridium phage phi9O, complete genome) position: , mismatch: 8, identity: 0.765
gcaacgtcttttattctttctttataattgctta CRISPR spacer
acaacttcttttgttctttctttataccttctct Protospacer
.**** ******.************* .* **.
38. spacer 2.23|819414|34|NZ_CP006954|CRISPRCasFinder,CRT,PILER-CR matches to NC_011318 (Clostridium phage 39-O, complete genome) position: , mismatch: 8, identity: 0.765
gcaacgtcttttattctttctttataattgctta CRISPR spacer
acaacttcttttgttctttctttataccttctct Protospacer
.**** ******.************* .* **.
39. spacer 2.23|819414|34|NZ_CP006954|CRISPRCasFinder,CRT,PILER-CR matches to NC_019496 (Clostridium phage phiCP26F, complete genome) position: , mismatch: 8, identity: 0.765
gcaacgtcttttattctttctttataattgctta CRISPR spacer
acaacttcttttgttctttctttataccttctct Protospacer
.**** ******.************* .* **.
40. spacer 2.23|819414|34|NZ_CP006954|CRISPRCasFinder,CRT,PILER-CR matches to NC_015917 (Borreliella bissettii DN127 plasmid lp28-4, complete sequence) position: , mismatch: 8, identity: 0.765
gcaacgtcttttattctttctttataattgctta CRISPR spacer
ccattttatttttttctttctttataatttctaa Protospacer
** . * **** **************** ** *
41. spacer 4.1|1531010|30|NZ_CP006954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010111 (Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-5, complete sequence) position: , mismatch: 8, identity: 0.733
agaaacgattgacgtagaattagaacagca CRISPR spacer
agaaacgattgacgtagcatttatgaaaga Protospacer
***************** *** . . *. *
42. spacer 4.3|1531142|30|NZ_CP006954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022536 (Spiroplasma corruscae strain EC-1 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.733
tctcccataattcctgtgtaatatttactt CRISPR spacer
agttgaataatacctgtgtaatatttccta Protospacer
*. ***** ************** **
43. spacer 4.4|1531208|30|NZ_CP006954|PILER-CR,CRISPRCasFinder,CRT matches to MT234670 (Pseudanabaena phage PA-SR01, complete genome) position: , mismatch: 8, identity: 0.733
tgccctacataaccaatgatttttacttcg CRISPR spacer
agagctacatgaccattgatttttactgta Protospacer
* ******.**** *********** ..
44. spacer 4.8|1531472|30|NZ_CP006954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045339 (Vibrio sp. THAF190c plasmid pTHAF190c_a, complete sequence) position: , mismatch: 8, identity: 0.733
ttgaatcatcaacaatcgcttttgattgtg CRISPR spacer
tgatttcaacaccaatcgcttttgattgaa Protospacer
* . *** ** **************** .
45. spacer 4.8|1531472|30|NZ_CP006954|PILER-CR,CRISPRCasFinder,CRT matches to MK448712 (Streptococcus phage Javan237, complete genome) position: , mismatch: 8, identity: 0.733
ttgaatcatcaacaatcgcttttgattgtg CRISPR spacer
tgatggcatccacagtcgcttttgattgtt Protospacer
* . . **** ***.**************
46. spacer 4.8|1531472|30|NZ_CP006954|PILER-CR,CRISPRCasFinder,CRT matches to MK448880 (Streptococcus phage Javan238, complete genome) position: , mismatch: 8, identity: 0.733
ttgaatcatcaacaatcgcttttgattgtg CRISPR spacer
tgatggcatccacagtcgcttttgattgtt Protospacer
* . . **** ***.**************
47. spacer 4.9|1531538|30|NZ_CP006954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017591 (Pantoea stewartii subsp. stewartii DC283 plasmid pDSJ10, complete sequence) position: , mismatch: 8, identity: 0.733
cttgtgttgttacttttgaacaatgcggat CRISPR spacer
tctgtgtagttatttttgaacaatgggtcc Protospacer
..***** ****.************ * .
48. spacer 2.23|819414|34|NZ_CP006954|CRISPRCasFinder,CRT,PILER-CR matches to NC_011251 (Borrelia duttonii Ly plasmid pl41, complete sequence) position: , mismatch: 9, identity: 0.735
gcaacgtcttttattctttctttataattgctta CRISPR spacer
gcaaaatcttttattctttctttattgtataaca Protospacer
**** .******************* .* .*
49. spacer 3.2|1425285|32|NZ_CP006954|PILER-CR matches to MG592459 (Vibrio phage 1.084.O._10N.261.49.F5, partial genome) position: , mismatch: 9, identity: 0.719
gcaaaggttgggtaaatcgtgtagcaggtaat CRISPR spacer
caaaaggttgagtaaatcgtgtagcttcactt Protospacer
********.************** *
50. spacer 4.4|1531208|30|NZ_CP006954|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032532 (Bacillus megaterium NCT-2 plasmid pNCT2_4, complete sequence) position: , mismatch: 9, identity: 0.7
tgccctacataaccaatgatttttacttcg CRISPR spacer
acggtaaaataatcaatgatttttacttca Protospacer
. * ****.****************.
51. spacer 4.8|1531472|30|NZ_CP006954|PILER-CR,CRISPRCasFinder,CRT matches to MN693046 (Marine virus AFVG_25M413, complete genome) position: , mismatch: 9, identity: 0.7
ttgaatcatcaacaatcgcttttgattgtg CRISPR spacer
atgaatcatccacaatcgctttaatgaaag Protospacer
********* *********** . . *
52. spacer 4.8|1531472|30|NZ_CP006954|PILER-CR,CRISPRCasFinder,CRT matches to MN693008 (Marine virus AFVG_117M9, complete genome) position: , mismatch: 9, identity: 0.7
ttgaatcatcaacaatcgcttttgattgtg CRISPR spacer
atgaatcatccacaatcgctttaatgaaag Protospacer
********* *********** . . *
53. spacer 4.11|1531670|30|NZ_CP006954|PILER-CR,CRISPRCasFinder,CRT matches to MK250029 (Prevotella phage Lak-C1, complete genome) position: , mismatch: 9, identity: 0.7
aagattttgatacatgtcttgcaactgccc CRISPR spacer
aagattttgaaacatgtcttgaagagaata Protospacer
********** ********** *. . .
54. spacer 2.6|818278|35|NZ_CP006954|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017773 (Paenibacillus crassostreae strain LPB0068 plasmid pPC03, complete sequence) position: , mismatch: 10, identity: 0.714
tgagcaaggttttaatgcctggaaagctcagaaga CRISPR spacer
ggttcaaggttttaatgcctggaaggatctagggc Protospacer
* ********************.* ** ...*
55. spacer 2.7|818345|35|NZ_CP006954|CRISPRCasFinder,CRT,PILER-CR matches to KT588073 (Acinetobacter phage Ab105-3phi, partial genome) position: , mismatch: 10, identity: 0.714
ttttaaaaacttaaagtattattaaggcataattt CRISPR spacer
tttttaaaagttaaagtattattaaatgaaagcaa Protospacer
**** **** ***************. * *..
56. spacer 2.23|819414|34|NZ_CP006954|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024238 (Escherichia coli O15:H11 strain 90-9272 plasmid unnamed) position: , mismatch: 10, identity: 0.706
gcaacgtctttt-attctttctttataattgctta CRISPR spacer
-tattatcctttgattctttcattataattgcggt Protospacer
.* ..**.*** ******** **********
57. spacer 2.23|819414|34|NZ_CP006954|CRISPRCasFinder,CRT,PILER-CR matches to NC_013507 (Escherichia coli ETEC H10407 plasmid pEntH10407, complete sequence) position: , mismatch: 10, identity: 0.706
gcaacgtctttt-attctttctttataattgctta CRISPR spacer
-tattatcctttgattctttcattataattgcggt Protospacer
.* ..**.*** ******** **********
58. spacer 2.23|819414|34|NZ_CP006954|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024249 (Escherichia coli O182:H21 strain D181 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.706
gcaacgtctttt-attctttctttataattgctta CRISPR spacer
-tattatcctttgattctttcattataattgcggt Protospacer
.* ..**.*** ******** **********
59. spacer 2.23|819414|34|NZ_CP006954|CRISPRCasFinder,CRT,PILER-CR matches to NC_017722 (Escherichia coli ETEC H10407 plasmid p666, complete sequence) position: , mismatch: 10, identity: 0.706
gcaacgtctttt-attctttctttataattgctta CRISPR spacer
-tattatcctttgattctttcattataattgcggt Protospacer
.* ..**.*** ******** **********
60. spacer 3.2|1425285|32|NZ_CP006954|PILER-CR matches to MN036035 (Leviviridae sp. isolate H4_Bulk_46_scaffold_683 RNA-dependent RNA polymerase (H4Bulk46683_000001), hypothetical protein (H4Bulk46683_000002), and hypothetical protein (H4Bulk46683_000003) genes, complete cds) position: , mismatch: 11, identity: 0.656
gcaaaggttgggtaaatcgtgtagcaggtaat CRISPR spacer
ttgaaggttgggtaaatcgactagcaataggc Protospacer
..**************** *****. ...
61. spacer 3.2|1425285|32|NZ_CP006954|PILER-CR matches to MN032827 (Leviviridae sp. isolate H2_Bulk_35_scaffold_543 RNA-dependent RNA polymerase (H2Bulk35543_000001) gene, partial cds; and hypothetical protein (H2Bulk35543_000002) and hypothetical protein (H2Bulk35543_000003) genes, complete cds) position: , mismatch: 11, identity: 0.656
gcaaaggttgggtaaatcgtgtagcaggtaat CRISPR spacer
ttgaaggttgggtaaatcgactagcaataggc Protospacer
..**************** *****. ...