CRISPRimmunity

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP006934	Spiroplasma sabaudiense Ar-1343 chromosome, complete genome	1 crisprs	DEDDh	2	3	1	0

1. NZ_CP006934

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP006934_1

• CRISPR_ID: NZ_CP006934_1
• CRISPR_location: 851793-852452
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 14 spacers

Consensus repeat of NZ_CP006934_1

Consensus_repeat	Method
CGGCTTCTGCTTTGGCTT	CRT

spacers of NZ_CP006934_1

>1.1|851811|36|NZ_CP006934|CRT
TGGCTTTTTCAGCTTCAAGTTTTGCTTTGGCTTTGT
>1.2|851865|30|NZ_CP006934|CRT
TTTCAGCTTCAAGTTTTGCTTTGGCTTTGT
>1.3|851913|39|NZ_CP006934|CRT
TGTCGGCTTCTGCTTTGGCTTGTTCAGCCGCTAGTTTGT
>1.4|851970|24|NZ_CP006934|CRT
TTGCTTGTTCGGCTGCTAGTTTGT
>1.5|852012|39|NZ_CP006934|CRT
GTTCAGCTTCTGCTTTGGCTTTTTCAGCTGCTAGTTTGT
>1.6|852069|18|NZ_CP006934|CRT
TGTCAGCTGCTAGTTTGT
>1.7|852105|18|NZ_CP006934|CRT
GTTCAGCCGCTAGTTTGT
>1.8|852141|39|NZ_CP006934|CRT
TTTCGGCTTCTGCTTTGGCTTTTTCAGCTGCTAGTTTGT
>1.9|852198|18|NZ_CP006934|CRT
TGTCAGCTGCTAGTTTGT
>1.10|852234|18|NZ_CP006934|CRT
GTTCAGCCGCTAGTTTGT
>1.11|852270|18|NZ_CP006934|CRT
TTTCAGCTGCTAGTTTGT
>1.12|852306|39|NZ_CP006934|CRT
GTTCAGCTTCTGCTTTTGCTTGTTCAGCCGCTAGTTTGT
>1.13|852363|18|NZ_CP006934|CRT
TTTCGGCTGCTATTCTGT
>1.14|852399|36|NZ_CP006934|CRT
CTTCTGCTTTTTCAGCTTCAAAATTTGTTTGTTCTT

CRISPR arrays and Neighbor proteins around NZ_CP006934_1

CRISPR arrays

The CRISPR arrays of NZ_CP006934_1

>merge|NZ_CP006934|1|851793-852452|CRT
CAGCTTCTGCTTTGGCTTTGGCTTTTTCAGCTTCAAGTTTTGCTTTGGCTTTGTCAGCTTCTGCTTTGGCTTTTTCAGCTTCAAGTTTTGCTTTGGCTTTGTCGGCTTCTGCTTTGGCTTTGTCGGCTTCTGCTTTGGCTTGTTCAGCCGCTAGTTTGTCGGCTTCTGCTTTGGCTTTTGCTTGTTCGGCTGCTAGTTTGTCGGCTTCTGCTTTGGCTTGTTCAGCTTCTGCTTTGGCTTTTTCAGCTGCTAGTTTGTCGGCTTCTGCTTTGGCTTTGTCAGCTGCTAGTTTGTCGGCTTCTGCTTTGGCTTGTTCAGCCGCTAGTTTGTCGGCTTCTGCTTTGGCTTTTTCGGCTTCTGCTTTGGCTTTTTCAGCTGCTAGTTTGTCGGCTTCTGCTTTGGCTTTGTCAGCTGCTAGTTTGTCGGCTTCTGCTTTTGCTTGTTCAGCCGCTAGTTTGTCGGCTTCTGCTTTGGCTTTTTCAGCTGCTAGTTTGTCGGCTTCTGCTTTGGCTTGTTCAGCTTCTGCTTTTGCTTGTTCAGCCGCTAGTTTGTCGGCTTCTGCTTTGGCTTTTTCGGCTGCTATTCTGTCGGCTTCTGCTTTTTCAGCTTCTGCTTTTTCAGCTTCAAAATTTGTTTGTTCTTCGGCTTCTTCTTTAATAA

>NZ_CP006934|1|1|851793-852452|CRT
CAGCTTCTGCTTTGGCTT	TGGCTTTTTCAGCTTCAAGTTTTGCTTTGGCTTTGT
CAGCTTCTGCTTTGGCTT	TTTCAGCTTCAAGTTTTGCTTTGGCTTTGT
CGGCTTCTGCTTTGGCTT	TGTCGGCTTCTGCTTTGGCTTGTTCAGCCGCTAGTTTGT
CGGCTTCTGCTTTGGCTT	TTGCTTGTTCGGCTGCTAGTTTGT
CGGCTTCTGCTTTGGCTT	GTTCAGCTTCTGCTTTGGCTTTTTCAGCTGCTAGTTTGT
CGGCTTCTGCTTTGGCTT	TGTCAGCTGCTAGTTTGT
CGGCTTCTGCTTTGGCTT	GTTCAGCCGCTAGTTTGT
CGGCTTCTGCTTTGGCTT	TTTCGGCTTCTGCTTTGGCTTTTTCAGCTGCTAGTTTGT
CGGCTTCTGCTTTGGCTT	TGTCAGCTGCTAGTTTGT
CGGCTTCTGCTTTTGCTT	GTTCAGCCGCTAGTTTGT
CGGCTTCTGCTTTGGCTT	TTTCAGCTGCTAGTTTGT
CGGCTTCTGCTTTGGCTT	GTTCAGCTTCTGCTTTTGCTTGTTCAGCCGCTAGTTTGT
CGGCTTCTGCTTTGGCTT	TTTCGGCTGCTATTCTGT
CGGCTTCTGCTTTTTCAG	CTTCTGCTTTTTCAGCTTCAAAATTTGTTTGTTCTT
CGGCTTCTTCTTTAATAA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP006934.1|WP_025251293.1|854554_854824_-|30S-ribosomal-protein-S19	unknown	unknown	gnl|CDD|178985
NZ_CP006934.1|WP_025251288.1|850912_851170_-|30S-ribosomal-protein-S17	unknown	unknown	gnl|CDD|235532
NZ_CP006934.1|WP_038673684.1|858061_858778_-|glucosamine-6-phosphate-deaminase	unknown	unknown	gnl|CDD|238693
NZ_CP006934.1|WP_025251287.1|850505_850874_-|50S-ribosomal-protein-L14	unknown	unknown	gnl|CDD|180117
NZ_CP006934.1|WP_025251292.1|854199_854535_-|50S-ribosomal-protein-L22	unknown	unknown	gnl|CDD|234793
NZ_CP006934.1|WP_025251279.1|846872_847310_-|50S-ribosomal-protein-L15	unknown	unknown	gnl|CDD|235523
NZ_CP006934.1|WP_025251282.1|848432_848975_-|50S-ribosomal-protein-L6	unknown	unknown	gnl|CDD|235495
NZ_CP006934.1|WP_025251296.1|856009_856636_-|50S-ribosomal-protein-L4	unknown	unknown	gnl|CDD|235404
NZ_CP006934.1|WP_025251281.1|848064_848415_-|50S-ribosomal-protein-L18	unknown	unknown	gnl|CDD|235524
NZ_CP006934.1|WP_025251285.1|849606_850161_-|50S-ribosomal-protein-L5	unknown	unknown	gnl|CDD|178791
NZ_CP006934.1|WP_025251294.1|854842_855679_-|50S-ribosomal-protein-L2	unknown	unknown	gnl|CDD|236488
NZ_CP006934.1|WP_025251280.1|847329_848046_-|30S-ribosomal-protein-S5	unknown	unknown	gnl|CDD|234790
NZ_CP006934.1|WP_038673681.1|850173_850491_-|50S-ribosomal-protein-L24	unknown	unknown	gnl|CDD|234566
NZ_CP006934.1|WP_025251284.1|849408_849594_-|type-Z-30S-ribosomal-protein-S14	unknown	unknown	gnl|CDD|181216
NZ_CP006934.1|WP_025251283.1|848991_849381_-|30S-ribosomal-protein-S8	unknown	unknown	gnl|CDD|234658
NZ_CP006934.1|WP_025251295.1|855725_856010_-|50S-ribosomal-protein-L23	unknown	unknown	gnl|CDD|376308
NZ_CP006934.1|WP_025251298.1|857530_857842_-|30S-ribosomal-protein-S10	unknown	unknown	gnl|CDD|179076
NZ_CP006934.1|WP_025251290.1|853070_853484_-|50S-ribosomal-protein-L16	unknown	unknown	gnl|CDD|236411
NZ_CP006934.1|WP_025251297.1|856647_857481_-|50S-ribosomal-protein-L3	unknown	unknown	gnl|CDD|234564
NZ_CP006934.1|WP_025251291.1|853487_854186_-|30S-ribosomal-protein-S3	unknown	unknown	gnl|CDD|234722

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP006934.1|WP_025251293.1|854554_854824_-|30S-ribosomal-protein-S19	gnl|CDD|178985	PRK00357, rpsS, 30S ribosomal protein S19; Reviewed.	5.68116e-58
NZ_CP006934.1|WP_025251288.1|850912_851170_-|30S-ribosomal-protein-S17	gnl|CDD|235532	PRK05610, rpsQ, 30S ribosomal protein S17; Reviewed.	8.44945e-43
NZ_CP006934.1|WP_038673684.1|858061_858778_-|glucosamine-6-phosphate-deaminase	gnl|CDD|238693	cd01399, GlcN6P_deaminase, GlcN6P_deaminase: Glucosamine-6-phosphate (GlcN6P) deaminase subfamily; GlcN6P deaminase catalyzes the reversible conversion of GlcN6P to D-fructose-6-phosphate (Fru6P) and ammonium. The reaction is an aldo-keto isomerization coupled with an amination or deamination. It is the last step of the metabolic pathway of N-acetyl-D-glucosamine-6-phosphate (GlcNAc6P). GlcN6P deaminase is a hexameric enzyme that is allosterically activated by GlcNAc6P.	4.58545e-122
NZ_CP006934.1|WP_025251287.1|850505_850874_-|50S-ribosomal-protein-L14	gnl|CDD|180117	PRK05483, rplN, 50S ribosomal protein L14; Validated.	5.51726e-73
NZ_CP006934.1|WP_025251292.1|854199_854535_-|50S-ribosomal-protein-L22	gnl|CDD|234793	PRK00565, rplV, 50S ribosomal protein L22; Reviewed.	1.74752e-55
NZ_CP006934.1|WP_025251279.1|846872_847310_-|50S-ribosomal-protein-L15	gnl|CDD|235523	PRK05592, rplO, 50S ribosomal protein L15; Reviewed.	5.58986e-71
NZ_CP006934.1|WP_025251282.1|848432_848975_-|50S-ribosomal-protein-L6	gnl|CDD|235495	PRK05498, rplF, 50S ribosomal protein L6; Validated.	5.85267e-102
NZ_CP006934.1|WP_025251296.1|856009_856636_-|50S-ribosomal-protein-L4	gnl|CDD|235404	PRK05319, rplD, 50S ribosomal protein L4; Provisional.	1.32881e-105
NZ_CP006934.1|WP_025251281.1|848064_848415_-|50S-ribosomal-protein-L18	gnl|CDD|235524	PRK05593, rplR, 50S ribosomal protein L18; Reviewed.	1.65355e-59
NZ_CP006934.1|WP_025251285.1|849606_850161_-|50S-ribosomal-protein-L5	gnl|CDD|178791	PRK00010, rplE, 50S ribosomal protein L5; Validated.	4.8801e-118
NZ_CP006934.1|WP_025251294.1|854842_855679_-|50S-ribosomal-protein-L2	gnl|CDD|236488	PRK09374, rplB, 50S ribosomal protein L2; Validated.	0
NZ_CP006934.1|WP_025251280.1|847329_848046_-|30S-ribosomal-protein-S5	gnl|CDD|234790	PRK00550, rpsE, 30S ribosomal protein S5; Validated.	2.1548e-95
NZ_CP006934.1|WP_038673681.1|850173_850491_-|50S-ribosomal-protein-L24	gnl|CDD|234566	PRK00004, rplX, 50S ribosomal protein L24; Reviewed.	1.72432e-25
NZ_CP006934.1|WP_025251284.1|849408_849594_-|type-Z-30S-ribosomal-protein-S14	gnl|CDD|181216	PRK08061, rpsN, type Z 30S ribosomal protein S14.	1.14586e-32
NZ_CP006934.1|WP_025251283.1|848991_849381_-|30S-ribosomal-protein-S8	gnl|CDD|234658	PRK00136, rpsH, 30S ribosomal protein S8; Validated.	1.78015e-79
NZ_CP006934.1|WP_025251295.1|855725_856010_-|50S-ribosomal-protein-L23	gnl|CDD|376308	pfam00276, Ribosomal_L23, Ribosomal protein L23.	4.30124e-37
NZ_CP006934.1|WP_025251298.1|857530_857842_-|30S-ribosomal-protein-S10	gnl|CDD|179076	PRK00596, rpsJ, 30S ribosomal protein S10; Reviewed.	2.64055e-58
NZ_CP006934.1|WP_025251290.1|853070_853484_-|50S-ribosomal-protein-L16	gnl|CDD|236411	PRK09203, rplP, 50S ribosomal protein L16; Reviewed.	2.02257e-88
NZ_CP006934.1|WP_025251297.1|856647_857481_-|50S-ribosomal-protein-L3	gnl|CDD|234564	PRK00001, rplC, 50S ribosomal protein L3; Validated.	4.35595e-114
NZ_CP006934.1|WP_025251291.1|853487_854186_-|30S-ribosomal-protein-S3	gnl|CDD|234722	PRK00310, rpsC, 30S ribosomal protein S3; Reviewed.	1.61953e-115

Protein sequences

>NZ_CP006934.1|WP_025251288.1|850912_851170_-|30S-ribosomal-protein-S17
MDRNSRKTYQGRVVSDKMEKTITVLVETYKNHPVYKKRVKYSKKYKAHDENGTAKIGDKVEIMETRPLSATKNFRLVRVVEKAVA
>NZ_CP006934.1|WP_025251287.1|850505_850874_-|50S-ribosomal-protein-L14
MIQNESRLKIADNSGAKEVLVIRNLGGSVRKFTNIGDIVVVTVKSAAPGGAIKKGQVVKAVIVRTVRGLRRDDGTYIKFSENAAVIIKEDKNPRGTRIFGPIAREVKDAGFSKIASLAPEVL
>NZ_CP006934.1|WP_038673681.1|850173_850491_-|50S-ribosomal-protein-L24
MNKQKIIKGDVVKIIAGSHKGKQGPVLKMSKDKKRVTVEGVTAIKHFKPTQNDSEGGIREIPTTVDISNVAIVDPKNKNNYSKIGYQIIDDKKIRIARKSKAPLK
>NZ_CP006934.1|WP_025251285.1|849606_850161_-|50S-ribosomal-protein-L5
MASKYVSRLEKNYKDKIVPELFKEKQFKSVMEVPKLEKIVINMGIGDAVHDVKKLDDAVNELTQITGSKPLVTKAKKSLAVFKLREGMPIGTKVTLRGRKMYDFLDKLINVALPRVRDFRGVPKTSFDGFGNYTLGIKEQIIFPEIDYDKVKKVRGMDITMVTTAKNNTDAYSLLEKMGMPFVK
>NZ_CP006934.1|WP_025251284.1|849408_849594_-|type-Z-30S-ribosomal-protein-S14
MAKKSLKVKQAKKQKFSVRAYTRCGNCGRPHSVLKKFNLCRLCFRDLAYKGQIPGIKKASW
>NZ_CP006934.1|WP_025251283.1|848991_849381_-|30S-ribosomal-protein-S8
MTTDVIADMLTRIRNANQRYHKDVLIPGSKMKLQIADILKREGFIEGFTIEEDFKKNITINLKYKGKSRVIQGLKRISKPGLRVYAQALEIPQVLNGLGIAIISTSKGIMTDKEARQQKVGGEVLAFVW
>NZ_CP006934.1|WP_025251282.1|848432_848975_-|50S-ribosomal-protein-L6
MSRIGNRVLTIPNGVEVKVEAGNKVSIKGSKGELQATFAPVIEIKVENNTVSTIRANEIKHTKQLHGTTNSLIQGMLEGVSQGFVKELQIVGVGYRAALAGNKINLSLGYSHPVEYIVPEGITVEIPKPTEIKISGIDKQLVGEVAANIRAYRRPEPYKGKGIKYKDEYIIRKEGKAAGK
>NZ_CP006934.1|WP_025251281.1|848064_848415_-|50S-ribosomal-protein-L18
MKFTKAEARKRRHFRVRKKVSGTQTKPRLNVFKSNTNFYAQIIDDVAGVTLVSSSSLKMDLKNKNNIEAAKAVGKDLAEKAKSKKITEVVFDRGGYLFHGKVKAFADSAKENGMKF
>NZ_CP006934.1|WP_025251280.1|847329_848046_-|30S-ribosomal-protein-S5
MSTEDNKIVEVNSAESTKPAEKTFAPRPNNRPGSKFSNNGEKKPFNKDGRKPFDKNNRRFEKEKDPYEEKVVKINRVTKVTKGGRRFRFAAVVVIGDRKGRVGLGTGKANEVPDAIKKAVKEAKKSLIRVSLSGTTVPHETIGNYGAGKVLIKPAKKGTGVIAGGPARAVIELAGVHDVYAKSLGSNTPINMIRATIEGLKSMQTPESIARLRSNSKPDQRHTSPVEVSQNVDSQVVV
>NZ_CP006934.1|WP_025251279.1|846872_847310_-|50S-ribosomal-protein-L15
MKLHELKYTPGSKQDATRVGRGMASGKGKTSTRGHKGQNSRSGGGVRPGFEGGQTPLYRRLPKIGFTSMNRKEFVLINLDLIEKLGLQTVDHQTLIDKKIIKNDKTLVKVLGNGKITKVVNVKVNKISKSAEQAIKANGGTVEVI
>NZ_CP006934.1|WP_025251290.1|853070_853484_-|50S-ribosomal-protein-L16
MLMPKRTKYRRPHRVSYEGKAKGASFIAFGEYGLMSLDGAWITTRQIEAARIAMTRYMKRFGKVWIRIFPHMAKTKKPLEVRMGSGKGAPEDWVAVVKQGTFMFEIAGVPEETAREALRLAMHKLPVRCKIIKRGEE
>NZ_CP006934.1|WP_025251291.1|853487_854186_-|30S-ribosomal-protein-S3
MGQKVSPNALRIGIIRTWDNRWFAEKQEYVKWLHQDIKIRKNVLKKLRNAAVSKIEIERTKKEIKIIIKSARPAIVLGQEGKNIENIVLEVKKTIKDRTANIKIDVVEIKNPDVDATLVAQWIGEQISNRASFRTVQKLAIRKALRAGAKGIKTSVSGRLGGVEMARTEGYLEGSVPLSTLRSDIDYALYEAKTTYGQIGVKVWINHGEILVKEVKNKDKMIASKPDVKEAK
>NZ_CP006934.1|WP_025251292.1|854199_854535_-|50S-ribosomal-protein-L22
MEAVAKLQMIRIAPRKMRLVVDTIRNKKIADAVAILMNLDKRASEPVLKLLNSAVANAVNNNGMEADKLFVKTVFVNEGATLKRFRPRAHGRAYEILKRTSHVTIIVSDIR
>NZ_CP006934.1|WP_025251293.1|854554_854824_-|30S-ribosomal-protein-S19
MSRSLKKGPFIDDYLLKKVESLGEKKEIIKTWSRRSTIFPNFIGHTFGVYNGKEFIPVYVTEDMVGHKLGEFSPTRKFGGHGDDKKKKK
>NZ_CP006934.1|WP_025251294.1|854842_855679_-|50S-ribosomal-protein-L2
MPIKKYRPITNGRRNMTTIDYSVLTTSKPEPSLLGKINEHAGRNNHGQITTRHKGGGHKRKYRIIDFKRNKMDIPGKVATIEYDPNRNSFISLINYADGEKRYILYVKDLKVGTEIIASENADIKLGNAAPLKNIPEGTLVHNVELRPGKGGQMARSAGSKVQILGKDDDGKYVTLRLASGEVRKVLAECFATIGEVGNEEYNLVNWGKAGRNRWRGIRPTVRGSVMNPNDHPHGGGEGRAPIGRKAPLTPWGKKALGVKTRDKKKASTKLIVRRRTK
>NZ_CP006934.1|WP_025251295.1|855725_856010_-|50S-ribosomal-protein-L23
MHLTNVIKKPVLTEKSYIGHANGVYTFEVDRRSNKTQIKKTFEQIFQVKVESVRTMNYDGKEKKMGKFVGTTNNRKKAIITLKAGETLDLLNDL
>NZ_CP006934.1|WP_025251296.1|856009_856636_-|50S-ribosomal-protein-L4
MKAQVYDIKGTSVKEITLNDKVWAIEPHQQAIYDTVVSQQAALRQGTKKTKTRAEVRGGGRKPWKQKGTGRARQGSIRAPQWRGGGIAFGPTPDINYKKSVNKKVRQLAIRSALSLKAKEENLVIIDKFNFEKPSTKGMVEVMSNLKVDNQKILIITKENEEIVIKSAGNLPGVKTLDSQKMNLFDILNASKLIITEDAVLRVEEVYA
>NZ_CP006934.1|WP_025251297.1|856647_857481_-|50S-ribosomal-protein-L3
MKGILGRKLEMTQVFTENGKLLPVTVIEIQPNKVLQVKTVESDGYQALKLGVQDKRQNLVNKPSMGNFKKANSNPKRFVKEIRDMNGFEIGAEITASDLFVTGQFVDVTGISKGKGFAGAIKRHNYSRGPMGHGSGYHRGIGSMGAIINRIFKSKKMAGHMGHEQVTIQNLEVIYIDSSRNLLLVKGSIPGPKKQFVRIQENAKGLKAKEAVKLLMRSAVVAEESSPKTTSDNEAKQSEEIIETQIVEETPNVEETPNVEEANKVDETVAENDSEVE
>NZ_CP006934.1|WP_025251298.1|857530_857842_-|30S-ribosomal-protein-S10
MAQQQKIRIKLKGYDHAIVDQSIAKIIEAAESTGAKVRGPIPLPTDKQIITILRAVHKYKDSREQFEMRTHKRILEIFNPTPKTMDILTRVQLPSGVDIEIKL
>NZ_CP006934.1|WP_038673684.1|858061_858778_-|glucosamine-6-phosphate-deaminase
MKVIKVLNEKEVGKVAGDLILSAIQSNSSSILGLATGSTPESTYEYLIEDFKKNKTDWSKVKTFNLDEYVGLSPDHKKSYRYFMNDKLFHKINIDIKNTHVPDGLKIENPEDYDKLISKNGGIDLQLLGIGTNGHIGFNEPGTSFDSLTSVVDLTAETIEVNSRFFESALEVPKKAVSMGLTSIMNARKIVLIAIGKNKAEAIKQLINGNISINWPCTILQNHKDVTVIIDEEAASLI

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP006934_1	1.1|851811|36|NZ_CP006934|CRT	851811-851846	36	NZ_CP006934.1	851547-851582	0	1.0
NZ_CP006934_1	1.2|851865|30|NZ_CP006934|CRT	851865-851894	30	NZ_CP006934.1	851553-851582	0	1.0
NZ_CP006934_1	1.2|851865|30|NZ_CP006934|CRT	851865-851894	30	NZ_CP006934.1	851607-851636	0	1.0

1. spacer 1.1|851811|36|NZ_CP006934|CRT matches to position: 851547-851582, mismatch: 0, identity: 1.0

tggctttttcagcttcaagttttgctttggctttgt	CRISPR spacer
tggctttttcagcttcaagttttgctttggctttgt	Protospacer
************************************

2. spacer 1.2|851865|30|NZ_CP006934|CRT matches to position: 851553-851582, mismatch: 0, identity: 1.0

tttcagcttcaagttttgctttggctttgt	CRISPR spacer
tttcagcttcaagttttgctttggctttgt	Protospacer
******************************

3. spacer 1.2|851865|30|NZ_CP006934|CRT matches to position: 851607-851636, mismatch: 0, identity: 1.0

tttcagcttcaagttttgctttggctttgt	CRISPR spacer
tttcagcttcaagttttgctttggctttgt	Protospacer
******************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP006934_1	1.4|851970|24|NZ_CP006934|CRT	851970-851993	24	NC_010466	Leuconostoc citreum KM20 plasmid pLCK2, complete sequence	26562-26585	3	0.875
NZ_CP006934_1	1.2|851865|30|NZ_CP006934|CRT	851865-851894	30	MG945755	UNVERIFIED: Microviridae sp. isolate 3098-1801, complete genome	4462-4491	6	0.8
NZ_CP006934_1	1.2|851865|30|NZ_CP006934|CRT	851865-851894	30	MH511048	Podoviridae sp. isolate ctbh1, complete genome	29640-29669	7	0.767
NZ_CP006934_1	1.2|851865|30|NZ_CP006934|CRT	851865-851894	30	NZ_CP053970	Bacillus thuringiensis strain FDAARGOS_796 plasmid unnamed2, complete sequence	179432-179461	7	0.767
NZ_CP006934_1	1.2|851865|30|NZ_CP006934|CRT	851865-851894	30	NZ_CP053979	Bacillus thuringiensis strain FDAARGOS_795 plasmid unnamed3, complete sequence	87645-87674	7	0.767
NZ_CP006934_1	1.2|851865|30|NZ_CP006934|CRT	851865-851894	30	NZ_CP013277	Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-2-350K, complete sequence	305967-305996	7	0.767
NZ_CP006934_1	1.2|851865|30|NZ_CP006934|CRT	851865-851894	30	NZ_CP039723	Bacillus thuringiensis strain BT-59 plasmid p2, complete sequence	73368-73397	7	0.767
NZ_CP006934_1	1.2|851865|30|NZ_CP006934|CRT	851865-851894	30	NZ_CP009348	Bacillus thuringiensis HD1002 plasmid 2, complete sequence	305968-305997	7	0.767
NZ_CP006934_1	1.2|851865|30|NZ_CP006934|CRT	851865-851894	30	NZ_CP045024	Bacillus thuringiensis strain JW-1 plasmid p2, complete sequence	305580-305609	7	0.767
NZ_CP006934_1	1.2|851865|30|NZ_CP006934|CRT	851865-851894	30	NC_018516	Bacillus thuringiensis HD-789 plasmid pBTHD789-1, complete sequence	251015-251044	7	0.767
NZ_CP006934_1	1.2|851865|30|NZ_CP006934|CRT	851865-851894	30	NZ_CP009334	Bacillus thuringiensis strain HD1011 plasmid 2, complete sequence	185212-185241	7	0.767
NZ_CP006934_1	1.2|851865|30|NZ_CP006934|CRT	851865-851894	30	MN694474	Marine virus AFVG_250M581, complete genome	33665-33694	7	0.767
NZ_CP006934_1	1.2|851865|30|NZ_CP006934|CRT	851865-851894	30	NC_049431	Vibrio phage 1.097.O._10N.286.49.B3, partial genome	60500-60529	7	0.767
NZ_CP006934_1	1.2|851865|30|NZ_CP006934|CRT	851865-851894	30	KX961630	Bacillus phage QCM8, complete genome	123615-123644	7	0.767
NZ_CP006934_1	1.2|851865|30|NZ_CP006934|CRT	851865-851894	30	MH717097	Escherichia phage C1, complete genome	27363-27392	7	0.767
NZ_CP006934_1	1.2|851865|30|NZ_CP006934|CRT	851865-851894	30	MH424446	Salmonella virus VSt472, complete genome	7150-7179	8	0.733
NZ_CP006934_1	1.2|851865|30|NZ_CP006934|CRT	851865-851894	30	MN693930	Marine virus AFVG_250M489, complete genome	8611-8640	8	0.733
NZ_CP006934_1	1.2|851865|30|NZ_CP006934|CRT	851865-851894	30	MG592519	Vibrio phage 1.150.O._10N.222.46.A6, partial genome	52218-52247	8	0.733
NZ_CP006934_1	1.2|851865|30|NZ_CP006934|CRT	851865-851894	30	MG592409	Vibrio phage 1.025.O._10N.222.46.B6, partial genome	52276-52305	8	0.733
NZ_CP006934_1	1.2|851865|30|NZ_CP006934|CRT	851865-851894	30	MG592668	Vibrio phage 2.130.O._10N.222.46.C2, partial genome	52356-52385	8	0.733
NZ_CP006934_1	1.2|851865|30|NZ_CP006934|CRT	851865-851894	30	MG592521	Vibrio phage 1.152.O._10N.222.46.E1, partial genome	52353-52382	8	0.733
NZ_CP006934_1	1.2|851865|30|NZ_CP006934|CRT	851865-851894	30	MG592410	Vibrio phage 1.026.O._10N.222.49.C7, partial genome	52355-52384	8	0.733
NZ_CP006934_1	1.1|851811|36|NZ_CP006934|CRT	851811-851846	36	MN693982	Marine virus AFVG_250M834, complete genome	25658-25693	9	0.75
NZ_CP006934_1	1.1|851811|36|NZ_CP006934|CRT	851811-851846	36	MH717097	Escherichia phage C1, complete genome	27357-27392	10	0.722
NZ_CP006934_1	1.1|851811|36|NZ_CP006934|CRT	851811-851846	36	MH424446	Salmonella virus VSt472, complete genome	7150-7185	11	0.694

1. spacer 1.4|851970|24|NZ_CP006934|CRT matches to NC_010466 (Leuconostoc citreum KM20 plasmid pLCK2, complete sequence) position: , mismatch: 3, identity: 0.875

ttgcttgttcggctgctagtttgt	CRISPR spacer
atgcttgttcggcagctagttttt	Protospacer
 ************ ******** *

2. spacer 1.2|851865|30|NZ_CP006934|CRT matches to MG945755 (UNVERIFIED: Microviridae sp. isolate 3098-1801, complete genome) position: , mismatch: 6, identity: 0.8

tttcagcttcaagttttgctttggctttgt	CRISPR spacer
tatcaatgacaagtttggctttggctttgt	Protospacer
* ***..  ******* *************

3. spacer 1.2|851865|30|NZ_CP006934|CRT matches to MH511048 (Podoviridae sp. isolate ctbh1, complete genome) position: , mismatch: 7, identity: 0.767

tttcagcttcaagttttgctttggctttgt	CRISPR spacer
attcagcttcacgttttgccttggctgctg	Protospacer
 ********** *******.****** .  

4. spacer 1.2|851865|30|NZ_CP006934|CRT matches to NZ_CP053970 (Bacillus thuringiensis strain FDAARGOS_796 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.767

tttcagcttcaagttttgctttggctttgt	CRISPR spacer
tttcagcttcaacttttgcttttgaatcag	Protospacer
************ ********* *  *.. 

5. spacer 1.2|851865|30|NZ_CP006934|CRT matches to NZ_CP053979 (Bacillus thuringiensis strain FDAARGOS_795 plasmid unnamed3, complete sequence) position: , mismatch: 7, identity: 0.767

tttcagcttcaagttttgctttggctttgt	CRISPR spacer
tttcagcttcaacttttgcttttgaatcag	Protospacer
************ ********* *  *.. 

6. spacer 1.2|851865|30|NZ_CP006934|CRT matches to NZ_CP013277 (Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-2-350K, complete sequence) position: , mismatch: 7, identity: 0.767

tttcagcttcaagttttgctttggctttgt	CRISPR spacer
tttcagcttcaacttttgcttttgaatcag	Protospacer
************ ********* *  *.. 

7. spacer 1.2|851865|30|NZ_CP006934|CRT matches to NZ_CP039723 (Bacillus thuringiensis strain BT-59 plasmid p2, complete sequence) position: , mismatch: 7, identity: 0.767

tttcagcttcaagttttgctttggctttgt	CRISPR spacer
tttcagcttcaacttttgcttttgaatcag	Protospacer
************ ********* *  *.. 

8. spacer 1.2|851865|30|NZ_CP006934|CRT matches to NZ_CP009348 (Bacillus thuringiensis HD1002 plasmid 2, complete sequence) position: , mismatch: 7, identity: 0.767

tttcagcttcaagttttgctttggctttgt	CRISPR spacer
tttcagcttcaacttttgcttttgaatcag	Protospacer
************ ********* *  *.. 

9. spacer 1.2|851865|30|NZ_CP006934|CRT matches to NZ_CP045024 (Bacillus thuringiensis strain JW-1 plasmid p2, complete sequence) position: , mismatch: 7, identity: 0.767

tttcagcttcaagttttgctttggctttgt	CRISPR spacer
tttcagcttcaacttttgcttttgaatcag	Protospacer
************ ********* *  *.. 

10. spacer 1.2|851865|30|NZ_CP006934|CRT matches to NC_018516 (Bacillus thuringiensis HD-789 plasmid pBTHD789-1, complete sequence) position: , mismatch: 7, identity: 0.767

tttcagcttcaagttttgctttggctttgt	CRISPR spacer
tttcagcttcaacttttgcttttgaatcag	Protospacer
************ ********* *  *.. 

11. spacer 1.2|851865|30|NZ_CP006934|CRT matches to NZ_CP009334 (Bacillus thuringiensis strain HD1011 plasmid 2, complete sequence) position: , mismatch: 7, identity: 0.767

tttcagcttcaagttttgctttggctttgt	CRISPR spacer
tttcagcttcaacttttgcttttgaatcag	Protospacer
************ ********* *  *.. 

12. spacer 1.2|851865|30|NZ_CP006934|CRT matches to MN694474 (Marine virus AFVG_250M581, complete genome) position: , mismatch: 7, identity: 0.767

tttcagcttcaagttttgctttggctttgt	CRISPR spacer
aattagcttcatgtttagctttggctttaa	Protospacer
  *.******* **** ***********. 

13. spacer 1.2|851865|30|NZ_CP006934|CRT matches to NC_049431 (Vibrio phage 1.097.O._10N.286.49.B3, partial genome) position: , mismatch: 7, identity: 0.767

tttcagcttcaagttttgctttggctttgt	CRISPR spacer
tttcagattcaagttttgctttagatgcta	Protospacer
****** ***************.* * .  

14. spacer 1.2|851865|30|NZ_CP006934|CRT matches to KX961630 (Bacillus phage QCM8, complete genome) position: , mismatch: 7, identity: 0.767

tttcagcttcaagttttgctttggctttgt	CRISPR spacer
atttagcttcaagttttgctttttctgcat	Protospacer
 **.******************  ** ..*

15. spacer 1.2|851865|30|NZ_CP006934|CRT matches to MH717097 (Escherichia phage C1, complete genome) position: , mismatch: 7, identity: 0.767

tttcagcttcaagttttgctttggctttgt	CRISPR spacer
tttcagctttacgttttgctttgttgtcgg	Protospacer
*********.* *********** . *.* 

16. spacer 1.2|851865|30|NZ_CP006934|CRT matches to MH424446 (Salmonella virus VSt472, complete genome) position: , mismatch: 8, identity: 0.733

tttcagcttcaagttttgctttggctttgt	CRISPR spacer
tttcagctttacgttttgctttgtcgccag	Protospacer
*********.* *********** * ... 

17. spacer 1.2|851865|30|NZ_CP006934|CRT matches to MN693930 (Marine virus AFVG_250M489, complete genome) position: , mismatch: 8, identity: 0.733

tttcagcttcaagttttgctttggctttgt	CRISPR spacer
tttcagctttaagttttgcttcaagatatt	Protospacer
*********.***********...  *  *

18. spacer 1.2|851865|30|NZ_CP006934|CRT matches to MG592519 (Vibrio phage 1.150.O._10N.222.46.A6, partial genome) position: , mismatch: 8, identity: 0.733

tttcagcttcaagttttgctttggctttgt	CRISPR spacer
cttcagtttcaagttttgctttagatgcta	Protospacer
.*****.***************.* * .  

19. spacer 1.2|851865|30|NZ_CP006934|CRT matches to MG592409 (Vibrio phage 1.025.O._10N.222.46.B6, partial genome) position: , mismatch: 8, identity: 0.733

tttcagcttcaagttttgctttggctttgt	CRISPR spacer
cttcagtttcaagttttgctttagatgcta	Protospacer
.*****.***************.* * .  

20. spacer 1.2|851865|30|NZ_CP006934|CRT matches to MG592668 (Vibrio phage 2.130.O._10N.222.46.C2, partial genome) position: , mismatch: 8, identity: 0.733

tttcagcttcaagttttgctttggctttgt	CRISPR spacer
cttcagtttcaagttttgctttagatgcta	Protospacer
.*****.***************.* * .  

21. spacer 1.2|851865|30|NZ_CP006934|CRT matches to MG592521 (Vibrio phage 1.152.O._10N.222.46.E1, partial genome) position: , mismatch: 8, identity: 0.733

tttcagcttcaagttttgctttggctttgt	CRISPR spacer
cttcagtttcaagttttgctttagatgcta	Protospacer
.*****.***************.* * .  

22. spacer 1.2|851865|30|NZ_CP006934|CRT matches to MG592410 (Vibrio phage 1.026.O._10N.222.49.C7, partial genome) position: , mismatch: 8, identity: 0.733

tttcagcttcaagttttgctttggctttgt	CRISPR spacer
cttcagtttcaagttttgctttagatgcta	Protospacer
.*****.***************.* * .  

23. spacer 1.1|851811|36|NZ_CP006934|CRT matches to MN693982 (Marine virus AFVG_250M834, complete genome) position: , mismatch: 9, identity: 0.75

tggctttttcagcttcaagttttgctttggctttgt	CRISPR spacer
tggcttttttagcttcaatttttgctgttccgctaa	Protospacer
*********.******** ******* *  * .*. 

24. spacer 1.1|851811|36|NZ_CP006934|CRT matches to MH717097 (Escherichia phage C1, complete genome) position: , mismatch: 10, identity: 0.722

tggctttttcagcttcaagttttgctttggctttgt	CRISPR spacer
cctctttttcagctttacgttttgctttgttgtcgg	Protospacer
.  ************.* *********** . *.* 

25. spacer 1.1|851811|36|NZ_CP006934|CRT matches to MH424446 (Salmonella virus VSt472, complete genome) position: , mismatch: 11, identity: 0.694

tggctttttcagcttcaagttttgctttggctttgt	CRISPR spacer
cctctttttcagctttacgttttgctttgtcgccag	Protospacer
.  ************.* *********** * ... 

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site
DBSCAN-SWA_1	938215 : 946904	8	Hokovirus(16.67%)	tRNA	NA

Sequences of DBSCAN-SWA_1

Nucleotide sequences of DBSCAN-SWA_1

>NZ_CP006934|938215:946904|DBSCAN-SWA
ATTAATTGATTCTTTCAAAAATTATTTTTCGGTCGTTAATTTTTTCAAAAACCAATTTGCCACTTTCTAATTCATAAATATTTAGCAGAGGCTTATTGTAACCAATTTGATTTAACATTAATGAGTAACTTTTAGTAAGAATTGGTGATAGCAAGTGAATGATCACTGCAATGCTTTCTTGCAACACTTTTAAAACTACTGCTAGATTTTTGGTGTCTCCTGATTTTTCAAGTGCTCATGGTTTTTCATCTTCAATGAACTTGTTCAATTCTTGAGAAAACCTCATAACAATATCAACGGCTTTGTGAATTTGATAATCATTCATTTCTTTAATATAATTTGCAATCATTTGATTTTTCAAATTTGTAATTTGATGATTTGCTAAGTCGATTTCTTCTAAAATATTTCCATCAAAATATTTTACAATCATGTTGTTAGTTCTAGAAATTAGATTGCCAATGTTGTTTGCCAAGTTAGTATTATAAGATTCAATAAACAATTCTTCTGTGAAATTACCATCGCGTTCAGTTGGTAATTCTTTTGCAATATAAAACCTAAGTGCATCACTTGAAAAACCATTAATAACAGCAATTGGATCAATAACATTTCCCAAAGATTTTGACATTTTTGTATCTTTTGCCAAAATTCATCCATGAGAAATTAGCTTTGTGGGCATTGGCAAACCTAATCCTTCTAAAATTACTGGTCAATAAATCGAGTGAAATCTAGTTATTTCTTTTCCCACATATTGAACAATTTCTGTTTTTGAATTTCAAAATTTTTTTAGTAAACTATTTTCGCTTTGCCCATAGCCCAAAGCAGTTATATAATTGGATAAAGCATCAATTCAAACATAAATTACATGTTTTGGGTCTTCGTTTGTTGGAATTCCTCACTCCAAAGAAATTCTTGTAACAGAAAGATCTTCAAGACCTGGCTCAATAAAATTTTTTAGCATTTCATTTTTTCTAGACTCTGGGGTTAAAAAATTAGTGTCAAATAACTTAGTTAAAAAATCAGAAAATTGAGAAACCCTTAAAAAATAAGTTTCTTCAGCTAAAATTTCTGGTTTGGTTTGCGAAACTTTACACAAACCTTCTTCGTTGATTTGCTCAGAGGTTAAAAATTCTTCACAACTTACACAATAAAGGCCCTTGTAACTTCCCTTGTAAATTAAATCTTTTTCAACAAGTTTTGAAAAAATTTCTTGGACCGCCTTTTTGTGGTAATCATCTGTTGTTCTAATAAACTTATCATAGTCAACATCAAGAAGATTTCATAAGTTTTTAAACTTTTCAACAATCTTGTCTACATAATTTTTTGGAGAAAGATTTTCAGCCAATGCTTTTGTTGCAATTTTTTGACCATGTTCATCTGATCCTGTTAAAAAGAAAGTTTCATAACCCATAAGTTTTTTATAGCGATTCATAATATCAGCTAACACCGTGGTGTAGGTGTGGCCAATATGTAAATCCCCACTTGCGTAATAAATTGGGGTTGTTACATAAAAAGTCTTTTTCATTTCTATTCCTCTATATTTACTTTTGTAAATTTGTAAATATCTCTCAAACCACGGTAGCTATCATTGTGGGCTAAGCCATACCCTACAAAGTAATCACTTTCCACATTAAATAAAGCTTTGTAATTAAATTTGAAACTTCTTTTAGTTCTGAATTTATCCAACAATGTTAGGACTCGAATTTCTTTTGGCTTTTCTTTTTCAATTGATTCATATAAAGATTGTAAAGTGGTACCAAAATCTAAAATGTCTTCAACAATTAAAACATTTTTACCTTTTAAACTACTTGATATTCCAATATCAAATTTAGCGGCGGAACTTTTAATTTCGTTTCCAACTTCTTGACTTTGTGTTGCAACAAATTGAACTCCAACATCAACTTTTAATTGACGAATTAAATCTGATACAAAAATGAAAACCCCTGAAAGTTTTGCCACAATTACAAGCGATTGGCCCTCATAGATTTTTGATAAATTTCTAGCTTCACTAATAATTGCACTTTTTATTTCTTCTTCGGTAATAACCGTTAATAATTTAGTTACTTCTTCCATTTTTTAAAATCCCTTCGTAAACTTTTTCAACATTTCTCAAAAAATAATCAAGGTGAAACATTTTTTCAAATTCATTTTCTTTTATATATTTGTTAATATTATTTTTTACCAATTCATCTTTGAAATCGCTAGCGTTTGCTTGACATCTCAAAGTGCACTCTTGAATAAAATCATAAATTTCTTCGCGAGAATAATTAGTATTCTTAATAATATAAGTTAAGATTGGTTGACTAAAAAATATATTTTTTTGTTCTTCAATATGCTTCATCATTTGTTTTGGATTTATATATAAATCTTTTATTGTCGATGTTAGGCGATTTAAAGAGTAAATAAGAGCATGATAAATATCAGGAAACATAATTCTTTCATTGGAGCTGTGGGAAATATCTCGCTCGTGTCATAGTAAATTATTTTCTAAACTCATACTTACAAAAGTTCTTATATATCTTGCTAAACCTGAAATATTTTCAGAACTAATCGGATTTTTTTTGTGAGGCATTGAACTTGAACCTTTTTGTCCAACTGCAAAGCCTTCCATCATTTCTTGAACTTCGCTACGTTGAAAACTGCGAATTTCAATTGCGATTTTTTCTATAGTTGATGCAATATTGGCAAAAACCGAAACTAAAAAAGCATGACGGTCCCTTTGAGTTACTTGTGTAGAAATTGTGTCAGTGCCAAGATTTAATTCTTTAGCTACAAATTCCTCTAGTTCTAATTCGAGGTTAGCATAATTACCCATTGATCCCGAAACTTTTGCAACCTCAATTTGATTTCTAGCTAAGTTCAAGCGTTCCACTTGGCGATTAATTTCTTCATATCACAATAAAAATTTTAATCCCAACGAAGTTGGCTCCCCATAAATTCCGTGAGTTCTTCCCATAATCATTGTTTTTTTATTTGCAATTGCTTTTTCTTTTAATATTGCTGTTAAATTATCTAAACTTTTCATTAAAACCTTGTTGGAATTTGCTATTAAATAATTTTGAGCCGTGTCCACAACATCAGTTGAAGTCAAACCTAAATGAATTCATTTTTTTTCTTCACCCAAAGATTCTGATAACATTCTTGTAAATGCCACAACATCGTGCTTAGTTTGAATTTCAATTTCTTGCATACGTTTATAATTTACCCGGGCATTTTTAATAATTTTTTCACAGTCACTTTTAGGAATAACTTTTAGCTCACACCATCCTAGAGTAACTTTATTTTCAACTAACAACCATGTTTCCAATTTGTTGGTTTCACTTCAAATTTTTTCAATTTCATTGACTTTATAACGATCAATCATTAAAATTCAGGCTCCAATAAAATTGTTTGTTGACGATCTGGTCCAACTGAAAAACCTAAAATATCAATGTTGCACAATTCTTTTATTTTATTTAAATAATTTTGAGCGTTAATTGGTAAATCTTTGAAAGAGTGAACTTTTGTTATATCTTCATTTCAACCCGGCATTTCAATATAATTTGCTTGACAATTTTGATAATCAGCATTCAATGGTGGTATGGTTGTAATTTCTTTACCGTCTAAACTATAACTTGTACAAATTTTGACAACTGGTTCTCCTGATAGTACATCAAGTAAAGTTATAAAAATTTTGTCTAGACCCGTAGTTCTAATTGCATAATTTAGGGCAACCGCATCAAACCAACCAACTCTTCTGGGACGACCAGTGTTTGAGCCATATTCATTTCCGCGCTTACGAATTCCTTCACCAATTGAATTCGCTTGTTCTGTAGGAAAACCTCCAGTTCCAACGCGAGTACAGTAAGCTTTCACAACTCCTAACGCTGTTGTAATTAGATTATGGTTGATTCCTGAACCCAACGATGCGTTATTTGCACTTGTATTTGAGCTAGTAACAAATGGATAAGTCCCGTGATCAATATCTAAAAGTGCTCCTTGAGCTCCCTCAAATAAAACATATTCTCCTGACTTGATAGCTGTGTCAATTAAAAGCGAGGTATCAACAATCTGGTTTTTTATTTTTTCAAAGTTACTCATTAATTCTTGATAAATAGTTTCAAAATCTAAAGCCTGACCTTCATAAACTTTTGTTATTAATCGATTTTTAAACTCAATAATTTCAGCAAATCTAGCTTTAAAGTTTGGATCAAATAAATCACAAATTCTCACCCCAAGGCGGTCAACTTTATCTTGATAAGTTGGTCCAATTCCTCGTTTTGTTGTCCCTATTTTATTTTTCCCTCGCGCATTTTCTTGAAGTTCATCAATTGCGATATGATATGGTAAAACAACATGGGCGCGGTTAGATATTAATAAGTTTTTAGTTTCAACTCCGGTTTTTTTTAAAATTTCTAATTCTGAAACCAGTCTTGGTAAATTAATTACAGCTCCATTGGCAATAACGTTGGTAACTTTTGGATTTAAAATTCCTGAAGGTACAATTGTTACTTTATGGCGAACTCCTTCACTTACAATAATATGTCCGGCATTATCTCCTCCAGAAAATCTTACAACCATTTTTGCTTTTTGAGCAAAATAGTCTGTAATTTTTCCCTTTCCCTCGTCGCCTCATTGTGCTCCAACGATAACTAAACTTTTATTTTTCATAGCTTCCTCCTAATTATATTTATTCATTAAATTAATAAATTCCATTCCTTCAACTCAATCTTTTAATCAATTAATTTTATTAACGAAATTAGTAATAATAGTTTTTAATTCTGTGTCAGAAATTTTTGATAACACTCAGTCAACAATTTTTCATCCAGGTTCAGGATTACCAATACCGATTCTCAATCTTTGAAAATTTGTAGTATGAAAATGACTAATCAAACTTTTAAGACCATTATGGCCAGCTGGGCTACCAAAATTTTTAAATTGTTGTTTGGTTATTGGAAAATCCTTTTCATCATGCAAAATAACTACGTCATTTAGTGATAATTTATAAAAGCTGATAATTTTTATCACTGAATCACCTGATAAATTCATGAAAGTTAGAGGCTTTGCCATAATAACTTTTTCTCCTGCAATATTTGCTGTAAATATTTGTGCTTGAAACTTTTCACCAGAAAAGTCTGCACGATAATGTTTTATCAACTCGTCAAGTACTAAAAAACCAGCATTGTGACGCGTTTGTTGATATTGCAATCCTGGGTTTCCCAATCCCACAATTAATTTCACTTACTTTTTATCTCCTAAAAACTTTTTAATTCGGCATAAAGTTTGTGCTTGAAATTCTCCATAGACATCCGACAAAGAGTCATTTTGAACAGAGGCCTTGATCATTGTAGCTAGTAAGTTGGCAACTGAAATAATTTTTAGACCCTTAAATTTTTTTGCTTCAGGAATTTCAATTGTATTTGTAACAACGATTTCCTTGACAATTTTATTTTGGATTGCGGTTGTCATTTTGCTTGGGCCTTCCCCATTAAATAATCCATGACCCCCAAAAATATAAACTTCTTTTGCTCCGTTTTCTTTTAAAGCATTGGCCGCGGCAATAATTGTCCCACCAGTATCTATCATGTCATCAACAATAAAACATACTCTATCTTGGATATCACCCAAAACAAATTCTACATTAGCTTTATTGGGTTCTGGCCTTCTCTTTGCAATAACAGCTATTCCATTTGTTAAACCGGCTGTATATTTTGCAACCTCATGAACACGAGTTAACCCTCCGTGATCTGGGGACACTAAAATACATTTGTTATGATCCAAATTATTATCAATTATTGTATTAATAATTTCGTTTGCCATAGTTTGAGCAGAGTGAAAGTTATCAACTGGAATATCAAAAAATCCCATTGACTGAGCTGAGTGGAGGTCCACGATAATAACTCGGTCGGCTCCAGCCTTCTCAATAAGGTTGGCAACTAATTTGGCTGTGATTGGTTGACGGCCTTTGGCTTTTCTATCTTGGCGTGCATATCCAAAATATGGTATTACAACGTTGATTTTTTGGGCACTTGCTCGCTTAAACATATCCACTGCAATCAACAGCTCCATCAAGTTTTCATTAACTGGCTGGCTTGTTGACTGAATTACATAAATTTCCTTACCCCGAACAGTATCCTCAGCTTGCATTAGGATTTCTCCATCAGCAAAAACGATTTTTTTTGCTATTTTTTGAGTGATTCCCAAAATTTTGCAAATTTCATCGGTTAATTTTTGGCTCGCTGATAAACCAAAAATATTTATTTCGTTTTGTTCCCTTGGCATATAAAAGAATTCTCGCTTCCCATAATATAAATATAACCTAAAAAATGTTATATTTATCATACTATTCCCAAAAATATGAAAAAATCGCTTTTATAAAAGCGATTTATTATAAATATTTACAAGTTCTAGAGTAGTCAAGTAACTATTGGTAGGAATTGCATTCTTATCAATAAGAATAAAAGCATTTTGGTAGATAAAGTTTTTAGTATTTTTAGAATTTACGAATTGTTTACTTGTTACTTCTTCATTTGGTTTGACAGCAACTTTATTAATACTGTTAACATAATCTTTATTTGCTAATAAAATCCCAGTCAAATTTAGTTTATAAGTTTTGATATTTTCAAATAAAAACATATTTAACTCGGTTTGGTCGTCTTGTTTAAGCTTATAAATAAAAATATTTAAGTTACTAAAAATCTTTTGGTATTCTTTTAAATTAGCCTTGTTTAGACCAAAAGCCAACCCAATTCCAGCTCCCAACGCTGTAAAACCCAAGATTGTAAGTCATGTTCAATAATCGACCATTTTAAATCCCAAAAAAATCACCAACGAAATTCCTACACTTAATCCAAAAATTGCCAGTAGAGAGGTTAAAAATATAATTAAATGCAGAGAGCTGATTCTAAATAACCGAAAGAAAATTAATTGAACTTGAAACAATTCAATTAAACCTTGTTTTAGAGAGTTTTTTGAAATTTTTGTATAGTCAACTGTGTTATCTTTTGCTATTGAATTTGCACTAATGGTTGGAAATAAAAATTTTTGATAATTTGCTTTAGTCTTTGGCTTCATAATTATTTAAAACACACCCTGTCACTTTGATTTTTATGCTGCTAATAGTATATAATAATACGGTTAGATTTATAACTATTTTTTAAATTATTAGGACGGAGAAAAAAATGAGTTTAGTATATATTGAAGGTTTAACTCATGCAAATGGAGGTAAAAAACTCTATGAAAATGCCACTTTAAGAATTAATAAAGGTGAGCATATTGCACTAGTTGGGGCAAATGGTGTTGGAAAAACAACGCTTTTAAATATTATAAATAATTCAATCATTCCAGATCACGGTAATATCGAGGTTCACCCTCGTGTTACTGTTGGATATTTAGACCAACATCAAAAAGTTGATGGGGAATTAACAGTAAATGCTTATTTGGAGGGAGCCTACAAAGAACTTTTTGATATTGAGGCCCAAATTTCAAAGATTTATGAAGATATGGCAATCGAATATAAAGAAGATGAATTAGTTCGCGCATTAAAGCTTCAAGAACATTTAGATTTAAATGACTTTGAAATAATTGGTAAGAAAATTCGTAGTTTAGTTGATGGTTTAGGAATTGAACACGAACGATTAGAACAAAAAATGAGCAGTTTATCTGGTGGGCAAAGGGGTAAAGTTCTTTTAGCGAAATTATTGCTAAGTGAAAATGACTACTTGCTTCTCGATGAGCCAACCAACTTTTTGGATATTGAGCAAGTTGACTGATTAGCAAAATTCTTACAAAGTTTTGAACCTGCCTTCATTATGGTTTCTCATGATAGTGAATTTATTAATAAAACTTGCAACATTATTTATGAAATTGAGAACCTTAAAATAAATCGTTACGTTGGAAACTTTGATAAATACATTGAACAATCTGAATTACGCAAGGAGCAATATACCAAGGAATGAGCTGGACAGCAAAAAACCATTAAAAAATTAGAAACTTATGTGGCAAAAAATGCCGCTAGAGCCTCAACCGCTAAGTCAGCACAATCTCGTCAAAAACAATTAGATAAAATGGATGTTATGAAGGAGCTTTCAGAACAAGCTAAACCAAAATTCAGTTTTAAATATAAAAGACCGGCAAGTTCAGTTATTGTTAAAGCTGAAAAATTAGAAATGGGTTATGATTTTGCTTTAACTCATCCACTTAACTTCGAGCTTCGTGAAGGTGAGAAATGTATTGTTTCTGGTTATAATGGAATTGGTAAGACCACCTTTTTGAAAACTTTAGCTGGAGAAATCCCAGCAATTAGTGGAACCTGCGAGTTAGGTAACGGCGTTCAAGTCGCATATTTTAGACAAATAGAAAAAAATACAGAAATGACACCTGTTCAATATATTAAAAATATTCACGAGGATATGCCTGAGTCAACAATTAGAGCCACAATTGCTAAGTTTGGACTGAAAAGTGCATTGATGAATAATCCGATGCATATGCTATCTGGGGGAGAACAGACCAAAGTTCGCTTAGCTGAAGCGAGTTTGATTCCTTGTAGCTTACTGATTCTTGATGAGCCAACAAACCATATAGATATTCTAGCAAAAGAAGCACTATTGGAGAGCATTAAAAATTTTGAGGGAACAGTATTACTTACAACTCATGATATTAACTTCTCAACTCAGTGAGCAGATAAAATTTTAGATTTTGAAAAGTTAGTATAA

Protein sequences of DBSCAN-SWA_1

>NZ_CP006934|938215:946904|940267_941575_-|WP_025251371.1|DBSCAN-SWA
MIDRYKVNEIEKIWSETNKLETWLLVENKVTLGWCELKVIPKSDCEKIIKNARVNYKRMQEIEIQTKHDVVAFTRMLSESLGEEKKWIHLGLTSTDVVDTAQNYLIANSNKVLMKSLDNLTAILKEKAIANKKTMIMGRTHGIYGEPTSLGLKFLLWYEEINRQVERLNLARNQIEVAKVSGSMGNYANLELELEEFVAKELNLGTDTISTQVTQRDRHAFLVSVFANIASTIEKIAIEIRSFQRSEVQEMMEGFAVGQKGSSSMPHKKNPISSENISGLARYIRTFVSMSLENNLLWHERDISHSSNERIMFPDIYHALIYSLNRLTSTIKDLYINPKQMMKHIEEQKNIFFSQPILTYIIKNTNYSREEIYDFIQECTLRCQANASDFKDELVKNNINKYIKENEFEKMFHLDYFLRNVEKVYEGILKNGRSN
>NZ_CP006934|938215:946904|943431_944472_-|WP_025251374.1|DBSCAN-SWA
MPREQNEINIFGLSASQKLTDEICKILGITQKIAKKIVFADGEILMQAEDTVRGKEIYVIQSTSQPVNENLMELLIAVDMFKRASAQKINVVIPYFGYARQDRKAKGRQPITAKLVANLIEKAGADRVIIVDLHSAQSMGFFDIPVDNFHSAQTMANEIINTIIDNNLDHNKCILVSPDHGGLTRVHEVAKYTAGLTNGIAVIAKRRPEPNKANVEFVLGDIQDRVCFIVDDMIDTGGTIIAAANALKENGAKEVYIFGGHGLFNGEGPSKMTTAIQNKIVKEIVVTNTIEIPEAKKFKGLKIISVANLLATMIKASVQNDSLSDVYGEFQAQTLCRIKKFLGDKK
>NZ_CP006934|938215:946904|941574_942861_-|WP_025251372.1|DBSCAN-SWA
MKNKSLVIVGAQWGDEGKGKITDYFAQKAKMVVRFSGGDNAGHIIVSEGVRHKVTIVPSGILNPKVTNVIANGAVINLPRLVSELEILKKTGVETKNLLISNRAHVVLPYHIAIDELQENARGKNKIGTTKRGIGPTYQDKVDRLGVRICDLFDPNFKARFAEIIEFKNRLITKVYEGQALDFETIYQELMSNFEKIKNQIVDTSLLIDTAIKSGEYVLFEGAQGALLDIDHGTYPFVTSSNTSANNASLGSGINHNLITTALGVVKAYCTRVGTGGFPTEQANSIGEGIRKRGNEYGSNTGRPRRVGWFDAVALNYAIRTTGLDKIFITLLDVLSGEPVVKICTSYSLDGKEITTIPPLNADYQNCQANYIEMPGWNEDITKVHSFKDLPINAQNYLNKIKELCNIDILGFSVGPDRQQTILLEPEF
>NZ_CP006934|938215:946904|945371_946904_+|WP_025251376.1|DBSCAN-SWA
MSLVYIEGLTHANGGKKLYENATLRINKGEHIALVGANGVGKTTLLNIINNSIIPDHGNIEVHPRVTVGYLDQHQKVDGELTVNAYLEGAYKELFDIEAQISKIYEDMAIEYKEDELVRALKLQEHLDLNDFEIIGKKIRSLVDGLGIEHERLEQKMSSLSGGQRGKVLLAKLLLSENDYLLLDEPTNFLDIEQVDWLAKFLQSFEPAFIMVSHDSEFINKTCNIIYEIENLKINRYVGNFDKYIEQSELRKEQYTKEWAGQQKTIKKLETYVAKNAARASTAKSAQSRQKQLDKMDVMKELSEQAKPKFSFKYKRPASSVIVKAEKLEMGYDFALTHPLNFELREGEKCIVSGYNGIGKTTFLKTLAGEIPAISGTCELGNGVQVAYFRQIEKNTEMTPVQYIKNIHEDMPESTIRATIAKFGLKSALMNNPMHMLSGGEQTKVRLAEASLIPCSLLILDEPTNHIDILAKEALLESIKNFEGTVLLTTHDINFSTQWADKILDFEKLV
>NZ_CP006934|938215:946904|938215_939736_-|WP_025251369.1|tRNA|DBSCAN-SWA
MKKTFYVTTPIYYASGDLHIGHTYTTVLADIMNRYKKLMGYETFFLTGSDEHGQKIATKALAENLSPKNYVDKIVEKFKNLWNLLDVDYDKFIRTTDDYHKKAVQEIFSKLVEKDLIYKGSYKGLYCVSCEEFLTSEQINEEGLCKVSQTKPEILAEETYFLRVSQFSDFLTKLFDTNFLTPESRKNEMLKNFIEPGLEDLSVTRISLEWGIPTNEDPKHVIYVWIDALSNYITALGYGQSENSLLKKFWNSKTEIVQYVGKEITRFHSIYWPVILEGLGLPMPTKLISHGWILAKDTKMSKSLGNVIDPIAVINGFSSDALRFYIAKELPTERDGNFTEELFIESYNTNLANNIGNLISRTNNMIVKYFDGNILEEIDLANHQITNLKNQMIANYIKEMNDYQIHKAVDIVMRFSQELNKFIEDEKPWALEKSGDTKNLAVVLKVLQESIAVIIHLLSPILTKSYSLMLNQIGYNKPLLNIYELESGKLVFEKINDRKIIFERIN
>NZ_CP006934|938215:946904|939738_940284_-|WP_025251370.1|DBSCAN-SWA
MEEVTKLLTVITEEEIKSAIISEARNLSKIYEGQSLVIVAKLSGVFIFVSDLIRQLKVDVGVQFVATQSQEVGNEIKSSAAKFDIGISSSLKGKNVLIVEDILDFGTTLQSLYESIEKEKPKEIRVLTLLDKFRTKRSFKFNYKALFNVESDYFVGYGLAHNDSYRGLRDIYKFTKVNIEE
>NZ_CP006934|938215:946904|942870_943431_-|WP_025251373.1|tRNA|DBSCAN-SWA
MKLIVGLGNPGLQYQQTRHNAGFLVLDELIKHYRADFSGEKFQAQIFTANIAGEKVIMAKPLTFMNLSGDSVIKIISFYKLSLNDVVILHDEKDFPITKQQFKNFGSPAGHNGLKSLISHFHTTNFQRLRIGIGNPEPGWKIVDWVLSKISDTELKTIITNFVNKINWLKDWVEGMEFINLMNKYN
>NZ_CP006934|938215:946904|944562_945264_-|WP_025251375.1|DBSCAN-SWA
MKPKTKANYQKFLFPTISANSIAKDNTVDYTKISKNSLKQGLIELFQVQLIFFRLFRISSLHLIIFLTSLLAIFGLSVGISLVIFLGFKMVDYWTWLTILGFTALGAGIGLAFGLNKANLKEYQKIFSNLNIFIYKLKQDDQTELNMFLFENIKTYKLNLTGILLANKDYVNSINKVAVKPNEEVTSKQFVNSKNTKNFIYQNAFILIDKNAIPTNSYLTTLELVNIYNKSLL

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_025251369.1|938215_939736_-|tRNA	methionine--tRNA ligase	A0A1V0SEZ7	Hokovirus	1.2e-76	36.5
WP_025251370.1|939738_940284_-	hypothetical protein	A0A218MMB5	uncultured_virus	2.0e-05	25.7
WP_025251371.1|940267_941575_-	adenylosuccinate lyase	A0A1B3B081	Gordonia_phage	2.9e-21	34.2
WP_025251372.1|941574_942861_-	adenylosuccinate synthase	G5CQQ4	Megavirus	1.9e-62	35.7
WP_025251373.1|942870_943431_-|tRNA	aminoacyl-tRNA hydrolase	NA	NA	NA	NA
WP_025251374.1|943431_944472_-	ribose-phosphate pyrophosphokinase	K4F5E2	Cronobacter_phage	3.6e-19	31.2
WP_025251375.1|944562_945264_-	hypothetical protein	NA	NA	NA	NA
WP_025251376.1|945371_946904_+	ABC-F family ATP-binding cassette domain-containing protein	A0A1V0SKJ1	Klosneuvirus	4.2e-56	29.6