CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP006829	Thalassolituus oleivorans R6-15, complete genome	3 crisprs	cas3,csa3,DEDDh,WYL,DinG,RT	1	0	3	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP006829_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP006829_1

418993-419102

Orphan

Consensus_repeat	Method
GCGGTGACGGGTAATTCTTCTGTTGGCGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP006829_1

>merge|NZ_CP006829|1|418993-419102|CRISPRCasFinder
GCGGTGACGGGTAATTCTTCTGTTGGCGGCCTAGTTGGCTACTTCTCTAGTAGTACCATTAATAGTAGTTTCGCTACTGGTGCGGTGACGGGTAATTCTTCTGTCGGCGG

>NZ_CP006829|1|1|418993-419102|CRISPRCasFinder
GCGGTGACGGGTAATTCTTCTGTTGGCGG	CCTAGTTGGCTACTTCTCTAGTAGTACCATTAATAGTAGTTTCGCTACTGGT
GCGGTGACGGGTAATTCTTCTGTCGGCGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP006829.1\|WP_025264630.1\|426059_428165_+\|TRAP-transporter-large-permease-subunit	unknown	unknown	gnl\|CDD\|224509
NZ_CP006829.1\|WP_025264619.1\|393627_393921_-\|type-VI-secretion-protein	unknown	unknown	gnl\|CDD\|269823
NZ_CP006829.1\|WP_025264623.1\|398438_399311_+\|Stp1/IreP-family-PP2C-type-Ser/Thr-phosphatase	unknown	unknown	gnl\|CDD\|223704
NZ_CP006829.1\|WP_015485571.1\|396557_397046_-\|type-VI-secretion-system-tube-protein-Hcp	unknown	unknown	gnl\|CDD\|377536
NZ_CP006829.1\|WP_015485583.1\|430853_431246_+\|30S-ribosomal-protein-S9	unknown	unknown	gnl\|CDD\|178888
NZ_CP006829.1\|WP_025264620.1\|393923_394508_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006829.1\|WP_155990811.1\|404991_408972_+\|LysM-peptidoglycan-binding-domain-containing-protein	unknown	unknown	unknown
NZ_CP006829.1\|WP_025264621.1\|394519_396406_-\|type-VI-secretion-system-tip-protein-VgrG	unknown	unknown	gnl\|CDD\|274542
NZ_CP006829.1\|WP_015485584.1\|431466_432063_+\|ubiquinol-cytochrome-c-reductase-iron-sulfur-subunit	unknown	unknown	gnl\|CDD\|273610
NZ_CP006829.1\|WP_015485582.1\|430417_430849_+\|50S-ribosomal-protein-L13	unknown	unknown	gnl\|CDD\|181703
NZ_CP006829.1\|WP_015485581.1\|429960_430272_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006829.1\|WP_015485580.1\|428252_429842_+\|peptide-chain-release-factor-3	unknown	unknown	gnl\|CDD\|179105
NZ_CP006829.1\|WP_025264622.1\|397458_398187_-\|transposase	unknown	unknown	gnl\|CDD\|224854
NZ_CP006829.1\|WP_025264633.1\|434151_434778_+\|stringent-starvation-protein-A	unknown	unknown	gnl\|CDD\|236537
NZ_CP006829.1\|WP_025264625.1\|401869_404842_+\|filamentous-hemagglutinin-N-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|273865
NZ_CP006829.1\|WP_155990812.1\|409041_411942_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|380149
NZ_CP006829.1\|WP_025264629.1\|420249_425787_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006829.1\|WP_015485586.1\|433297_434056_+\|cytochrome-c1	unknown	unknown	gnl\|CDD\|225413
NZ_CP006829.1\|WP_025264624.1\|399720_401772_+\|ShlB/FhaC/HecB-family-hemolysin-secretion/activation-protein	unknown	unknown	gnl\|CDD\|225387
NZ_CP006829.1\|WP_144055406.1\|432086_433295_+\|cytochrome-b	unknown	unknown	gnl\|CDD\|177203

Protein	Function_ID	Function_description	E-value
NZ_CP006829.1\|WP_025264630.1\|426059_428165_+\|TRAP-transporter-large-permease-subunit	gnl\|CDD\|224509	COG1593, DctQ, TRAP-type C4-dicarboxylate transport system, large permease component [Carbohydrate transport and metabolism].	8.77212e-20
NZ_CP006829.1\|WP_025264619.1\|393627_393921_-\|type-VI-secretion-protein	gnl\|CDD\|269823	cd14738, PAAR_2, proline-alanine-alanine-arginine (PAAR) domain. This domain is found in the PAAR (proline-alanine-alanine-arginine) repeat family, where it forms a sharp conical extension on the VgrG spike, a trimeric protein complex of the bacterial type VI secretion system (T6SS). The T6SS is responsible for translocation of a wide variety of toxic effector molecules, allowing predatory cells to kill prokaryotic as well as eukaryotic prey cells. The pointed tip of the PAAR domain is stabilized by a zinc atom positioned close to the cone's vertex and is likely to be important for its integrity during penetration of the target cell envelope. VgrG proteins are orthologous to the central baseplate spikes of bacteriophages with contractile tails, and genes encoding proteins with PAAR motifs have been frequently found immediately downstream from vgrG-like genes. It has been shown that PAAR proteins are essential for T6SS-mediated secretion and target cell killing by Vibrio cholerae (encodes two PAAR proteins) and Acinetobacter baylyi (encodes three PAAR proteins); inactivation of all these PAAR genes results in inactivation of Hcp secretion as well as T6SS-dependent killing of E. coli.	2.53815e-40
NZ_CP006829.1\|WP_025264623.1\|398438_399311_+\|Stp1/IreP-family-PP2C-type-Ser/Thr-phosphatase	gnl\|CDD\|223704	COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms].	1.7354e-68
NZ_CP006829.1\|WP_015485571.1\|396557_397046_-\|type-VI-secretion-system-tube-protein-Hcp	gnl\|CDD\|377536	pfam05638, T6SS_HCP, Type VI secretion system effector, Hcp. HCP is a family of proteins which are expressed in up to 1000 copies in Gram-negative bacteria. Together these copies aggregate into a needle-like shaft or tube that will penetrate other bacteria via a puncturing protein attached to its head. Initially Hcp forms a hexameric structure with a central channel of 40 Angstroms. These hexamers pile up one on top of each other forming nanotubes resembling the gp19 tail phage tube.	3.71963e-42
NZ_CP006829.1\|WP_015485583.1\|430853_431246_+\|30S-ribosomal-protein-S9	gnl\|CDD\|178888	PRK00132, rpsI, 30S ribosomal protein S9; Reviewed.	2.65481e-82
NZ_CP006829.1\|WP_025264621.1\|394519_396406_-\|type-VI-secretion-system-tip-protein-VgrG	gnl\|CDD\|274542	TIGR03361, VI_Rhs_Vgr, type VI secretion system Vgr family protein. Members of this protein family belong to the Rhs element Vgr protein family (see TIGR01646), but furthermore all are found in genomes with type VI secretion loci. However, members of this protein family, although recognizably correlated to type VI secretion according the partial phylogenetic profiling algorithm, are often found far the type VI secretion locus.	1.49299e-161
NZ_CP006829.1\|WP_015485584.1\|431466_432063_+\|ubiquinol-cytochrome-c-reductase-iron-sulfur-subunit	gnl\|CDD\|273610	TIGR01416, Rieske_proteo, ubiquinol-cytochrome c reductase, iron-sulfur subunit. This model represents the Proteobacterial and mitochondrial type of the Rieske [2Fe-2S] iron-sulfur as found in ubiquinol-cytochrome c reductase. The model excludes the Rieske iron-sulfur protein as found in the cytochrome b6-f complex of the Cyanobacteria and chloroplasts. Most members of this family have a recognizable twin-arginine translocation (tat) signal sequence (DeltaPh-dependent translocation in chloroplast) for transport across the membrane with the 2Fe-2S group already bound. These signal sequences include a motif resembling RRxFLK before the transmembrane helix. [Energy metabolism, Electron transport].	1.47195e-78
NZ_CP006829.1\|WP_015485582.1\|430417_430849_+\|50S-ribosomal-protein-L13	gnl\|CDD\|181703	PRK09216, rplM, 50S ribosomal protein L13; Reviewed.	1.03386e-103
NZ_CP006829.1\|WP_015485580.1\|428252_429842_+\|peptide-chain-release-factor-3	gnl\|CDD\|179105	PRK00741, prfC, peptide chain release factor 3; Provisional.	0
NZ_CP006829.1\|WP_025264622.1\|397458_398187_-\|transposase	gnl\|CDD\|224854	COG1943, COG1943, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	1.38213e-13
NZ_CP006829.1\|WP_025264633.1\|434151_434778_+\|stringent-starvation-protein-A	gnl\|CDD\|236537	PRK09481, sspA, stringent starvation protein A; Provisional.	6.63824e-118
NZ_CP006829.1\|WP_025264625.1\|401869_404842_+\|filamentous-hemagglutinin-N-terminal-domain-containing-protein	gnl\|CDD\|273865	TIGR01901, Heme/hemopexin-binding_protein, filamentous hemagglutinin family N-terminal domain. This model represents a conserved domain found near the N-terminus of a number of large, repetitive bacterial proteins, including many proteins of over 2500 amino acids. Members generally have a signal sequence, then an intervening region, then the region described by this model. Following this region, proteins typically have regions rich in repeats but may show no homology between the repeats of one member and the repeats of another. A number of the members of this family have been designated adhesins, filamentous haemagglutinins, heme/hemopexin-binding protein, etc.	2.82022e-09
NZ_CP006829.1\|WP_155990812.1\|409041_411942_+\|hypothetical-protein	gnl\|CDD\|380149	NF012181, MSCRAMM_SdrD, MSCRAMM family adhesin SdrD. Features of this protein family include a YSIRK-type signal peptide at the N-terminus and a variable-length C-terminal region of Ser-Asp (SD) repeats followed by an LPXTG motif for surface immobilization by sortase.	0.00347878
NZ_CP006829.1\|WP_015485586.1\|433297_434056_+\|cytochrome-c1	gnl\|CDD\|225413	COG2857, CYT1, Cytochrome c1 [Energy production and conversion].	5.44551e-68
NZ_CP006829.1\|WP_025264624.1\|399720_401772_+\|ShlB/FhaC/HecB-family-hemolysin-secretion/activation-protein	gnl\|CDD\|225387	COG2831, FhaC, Hemolysin activation/secretion protein [Intracellular trafficking and secretion].	9.39701e-58
NZ_CP006829.1\|WP_144055406.1\|432086_433295_+\|cytochrome-b	gnl\|CDD\|177203	MTH00145, CYTB, cytochrome b; Provisional.	1.59572e-124

>NZ_CP006829.1|WP_155990812.1|409041_411942_+|hypothetical-protein
MFFNMAITPLRLLMPMILGCLIMPAAFAESGRADYDLDDDGLIEINSLADLDEIRNNLDGTSLYGNSTGCPVDGCIGFELTTTLDFDTNADGVMDTNDAYWNGGDGWMPVGSSSTPFTTIFDGNGHQIRNLYINRSSTDYIGLFGVISGESTQLRNIGLTGKLMQVLGDDYVGGLVGYANSAARIEQSYVTGAVTGDWYVGGVAGRLYSNSIMNNSFATGAVTGDYSVGGLVGSIISGSTINSSFVTGAVTGDSSVGGLVGDYNGSVITNSYWAVDTTGISSTSLSAVTLAELQCPAGADNSSCASGKILYAEWDSGVWDFGTNTQLPSLILSGTTYRDSDGDGSLDEDDDFPSNRAASIDSDSDGHPDVWNSFCDRECIGGSGLTLDRFPNNPAAWLDEDLDGFPDSWADSCDVNCQAASGLTLDSYPNDIDEDGVNDDTDTDDNGDGIIDADSDSDGLIDVSSLEQLNAMRYNLAGSGRTLVDGGDSDSSGCPATVIDGVMQLVCTGYELTTTLDFDTNADGVMDANDAYWNDGAGWEPIGSEDYFESVFDGNGYEIRNLYINRSTPIVGLFAVISGDAAALRNIGVIGKLVATADDYVGVLAGAAISGAKVSDAYAIGTVSGNKYAGGLVGFLIDASIRRSFVIGDVSGGDEVGGLVGAADGYGFISDTFTTGSVAGSSYVGGLLGRFGIELGGDVVIANSFSTGLVTATDRYVGGSVGGVYGDIAITNSHWATDTTGQLNSERESEIDNYFGATLAELQCPTSSENKDDCVISNTLYAGWDSSVWDFGTSTQLPGLIINGIVYRDEDGNGSLDENQAPTVTLTLKQDGYVVSDITAGDGDVTLEATITDPDVSDRHTLSWTYDGITVTSETDTGVTFKSDNLVAGEYTVSVVATDNRYSPLSAEAEITFTVYSAYVPEPAPAPGNTSTSSGKKGGGGALSIIWLMLCSGLVYARQRRVVFAG
>NZ_CP006829.1|WP_155990811.1|404991_408972_+|LysM-peptidoglycan-binding-domain-containing-protein
MKANDIVFEDINTTIDAGDNGTGSDKLTSDFDATLAGASKALISNGFTFQNIETADLNTKALTGSDSADTFVLATVDNTTQLKANDIVFEDINTTIDASGNTGGNDKLTSTFDASLTSENNEVSSSGYLFQGIEETVLADGTLTGTTAAETFTVAGSKAVGVYGIDFKGVTTVVAGTATDVVDTVDTNGTDAALDVANNQLIASDITFKEIEKADFAGDNGNGTLTGSADSDSFVVNADGLKANEIVVTGLKTNADGIATINALGNAAGVDKLTSTFDASLTSENNEVSSSGYLFQGIEETVLADGTLTGTAAAETFTVAGSKAVGVNGIDFKGVTTVVAGTATDVTDTVDTDGTAAALNGNNNELVVSDITFKEIESADLASTTIKGTLTGTEEAEDFVVGSSVNELVVNAINFTGVDTVVAGTKSGVIDTLDTQGNSATLSGIDNEVIASSITFQQIESVDLASDTVKGTLNGTDVSDEFEINGANALTSDNVKFTGVGSVAAGSSNDDSITSTLAVDASLSAANKALMVAGINFTAIDSANLSQGIVTGTDSSETFEISNTNNAVTVNGMSLTAVSAVNAGSSTGDVVKVATGVQATADLTAVDNQILASAITFNDVDTVNLGGGTLNGSNSENEVYVVNTTANALAVKNMQFESVNAVNGGADSIDSIATLGVAVDAQLTGADKQLLVSDITFSDISSANMSGGRLSGSDEADTIQLTSAGMAANEINFYLINSAIDSQGGDDTVIGRAGVDWTLTGTNGEINSVRYQFKNVENVDVVSEGVTGSAIAETFELGTEESQVIVNQLTLSNVSTVTADLNDTLLGTSGDDVFNVNSDTSVITNSTTFDGMENLNGGEGQDTLISNVDGLAWIINQASDGVNSLGDFLFSQFEVLNNNVGNLNLSTSLQAVFAGESVSFIGGNSSTASIQAVPSDMNLNFNGQKDVIINSTYVGKNAITGNLIAHLADINASGDIDLDTEIDILNVSTNDNRSINATFVQNGDLVLRTVDVGDSGTVILDSAVEGTGLLTTETRNEVNFVAKSVSIGTGKSDRQGAGLWEGVGSAADASQLTFDVSFNLDLEALYYVTPFFPNGAPITSQLEGIESDSLISSQQSALIVTDTVQNLAQLDPAIFESLTPYIADANSIAGADNYYASSEVPSTLDTAQLAALLSSYEPTAAGGVNYDEYKLDGESEEDDDKKKLAKKLSKAGTFVADDNSDIKVAYSESGEMLGVVKDYVFQAGDSLWSLSKRYLGNGFAWTEIAKQNPSIKNPSSIADGQIIKVVVKVSDEIGQILKSAISAGGISKEGNSATLPASLRREVALP
>NZ_CP006829.1|WP_025264625.1|401869_404842_+|filamentous-hemagglutinin-N-terminal-domain-containing-protein
MTKNTNTSKNVTTAATGFLPKLKQLAEAIRNANLIAAGIRGSLLGSLIAGQIVMPVAVLALPDVNNSYGVDITTSTTGSKTKMTIDQNQAVIKIDWNSFEVGSSETINFDQAGNSSYIAINNIFDTNGSTIYGNITADGNIVLINPYGIVFAENSSVDVGGLLASGLDVSNLDDFVSGSSDKLQFASDFSNNSLKVGSVANLGVISAESTILLGRSVTNSGDINNKVGFGSIILADVVALVGADGATVSFDDGLLGISVGASLTGLGGDTSAIVLNEGTIKGKSILLQASVAEDLLASAVNNSGVIEAGSVSVNGDQIRLVGINTFDSSSAGASVSNSGSIKAKNGASITIEADSVLLAAGTGISSTGTEATLGTDEIPAGSIKVTTNELNVSGASSDYNDFDLLVNDVSVSEANKLNINISGSSAIEVSGLSTVVASDATINGTDAVGETFAVSSTNAVGVNGIDFSGVTTVVAGTATDIIDIVNAGGDGAQLNGANNELNASDITFEEVEKADLANGTLVGKDDVNEAFSIDSDGITVSVNSMSLTSVSAIDAGTSSGDSVTFGVATSASLVAENKITDPGVEELVAIDNSLSTTHIDFSNINSADLKGGVLTGSDGADTFVVNTGGLKANEIAVTGLALNTDGFATIDAGGNASGADKLTSDFDATLTGASKALTSSGFTFQNIETADLNTNSLKGSDSADTFVLATVDNATQLKANDIVFEDINTTIDAGANGAGSDKLTSDFDATLAGAAKALISNGFTFQNIETADLNTKTLTGSDSADTFVLATVDNVTQLKANDIVFEDINTTIDAGDNGTGSDKLTSDFDATLAGASKALISNGFTFQNIETADLNTKALTGSDSADTFVLATVDNATQLKANDIVFDDISSTIDAGGNGTGSDKWTSDFDATLAGATKPVSSYGFTFQNIETADLNTKRLTGSDRADTFLLGTGDNATQLKANDIVFDDINSTIDAGANGTGSDKFNVRF
>NZ_CP006829.1|WP_025264624.1|399720_401772_+|ShlB/FhaC/HecB-family-hemolysin-secretion/activation-protein
MLKGEASLTLITSLNRMKQSLAVAISTIMLTAGALTVQAEGAAVAPPQADLNALRSIFGIDAPNSAGDVSDAYAERQKKDDLAPKLNGEIPDAAKRDAGPRIIVNQFVFDDLREYPEIGITKKSVEQEAERLRADYMKEEKRIAGGFTIDESAEVIEYLSEIGRQGDADNLTYEDMQNLVEIVRQQNRNRGLSYADLEEVTNKLTLFYRQKGLFLTRVQLPAQNIKDGIVRLSILEGRLGQVEAINNKKYTLKTLSSPFEPVMDKAVSGTRIEESLYVLNDLPGLNITGAFTAGENPGETKLKLNVRDEEALRFLVRLDNHGSAFTGDTRLFTSMEWYNPIGFGDSLKVGYLRSEDIEGKNVADNESRANLGQFSYSFPFFSLRTRVTLSADYNSYSIVDEDGGVINALELEGTSSNYALNIDHKIKRSRDFNMSTGFTLTDKETKIDSEFIPAGDHAVGGEFNFYIDGLNRSGLRMLNVANFTLQYGEHKNEVAEGRDDTFTKFGIDTNSLFFVPLPFSEEYSRLITTIKMQYSSASLPSFEQFSMGGANGVRAFRVGKFSADTSAYIANEWYFDLPRWSFIGNRTFGEVFQAGLLLDFAYGVQNGGFTTDSGGLADDEWARMSAAGIVIKAVWGNTFSSKITIATPIEGKSSLDPEGDSSVEKLNEKPDTVEVFADINFVF
>NZ_CP006829.1|WP_025264623.1|398438_399311_+|Stp1/IreP-family-PP2C-type-Ser/Thr-phosphatase
MSNTAGVRLAVNGKTDIGRVREENEDAIRWHADATLPFGYVVIADGMGGYSGGSLASRIAVETFSQVLDGLITPIFLACTPDQQNLMIHSAINNTVGKANQSIIDAKLENPQFAHMGTTLVLAVVWQDQLVVAHVGDSRAYMWSTAGIVQITKDHSVVQDMIDAGALTEEQARVSNVRNHITRALGVTEDVEPTIQSLTLNKSSLLLLCSDGLSEYFDNSELEHVLATHRPALECCYRLIDEANQCGGKDNISVGILEFTANSTVSPVVAGSVPAGSGEDTTVRRDRPSH
>NZ_CP006829.1|WP_025264622.1|397458_398187_-|transposase
MARLPRINIANIPQHVVQIGHNNLNCFFDDEDYDFYLTSLKKAADQYDVNIHAYVLLPNAVQIIATPNIPQGISSMMQSLGRRYVQYINHRYQRSGTLWAGRYKSSVIDSDAYLLTCYRYVELKPMYEGLVDSPELYAWSSFNYHTGREPSDLIADHRLFMNLGDTHDDRADEYSAMFRFRFDRMLLDYIAETIKLGQVLGGDRFTEKIEQIANHRVRPLKRGRPKKKNKDEQSSSSGTATA
>NZ_CP006829.1|WP_015485571.1|396557_397046_-|type-VI-secretion-system-tube-protein-Hcp
MAIYMNFNEKSPAGNVTAAGYEDWIEVDSMSFGVGRSISMQAGAMANREASRPSISEVTITKPLDAASGGLFKASVTGDSGVKVEIHVVQTGAEKVEKYAVYKLEDVIMSSYSVSASAGGAPQESISLSFAKIEADLTHADKTNKNTKNMKVGYDLTTAKPL
>NZ_CP006829.1|WP_025264621.1|394519_396406_-|type-VI-secretion-system-tip-protein-VgrG
MSVLSQNKRLIQVDTPVGKDAFTVSELIGDEYISDLFRYTLELFSDNHNINQKDIVGKDITVSILADGETTTRYINGYVNHLAMLDVNDEGLRRYRLEMVPGLWFTTLGSKNRIFHKKNVKDIVSEVLGEYSKVVTHQFKPTGSYLVREYCVQFDETDFDFISRLLAEEGISYYFTHDDGKHELVLADDMQDYFDAASEKIEYDGGGTQPTKHTIHSWQRSFNYHTGGFEFKDYSEFTTTKDNKQVVKTKSPLNSVSDFTTSGYGIYNYEIDGENKHKFIDAQNKSASEKAMEAHEAGFDVAQGTSDVVTLAAGGRFEIDHSITSESGKYLLTQVHIVARDGNDQDTHFSNRFVCVPNGVIVRPKHNNFAKKIHTPQIATVAEVKATGSDSSSDVLTQVKVTFPWNTAQNSCWVRVVQQFAGKGWGANFVPRVGQEVVISYINGDPDRPLVTGAVYNGTNDGPNYTATQSGWKTAIKDSKFNELRFDDKKGDEEIYMEAGKDHNWVVHNDQTGLVENDQTLTITENRTATISNGNDNLTVSKGDQTTKIDAGNHTLKIAKGTSTIDAMGAIKITSKTSIELKVGANTIKIDQSGIEIKGTMVKAKASAMGEVSAGGILTVKGALTKIN
>NZ_CP006829.1|WP_025264620.1|393923_394508_-|hypothetical-protein
MSDLIKIQALTADELLKEFELTEPEAEAVVIPDTAPQISIERLIAAGFYADAIKLLAHGLPKRESVWWACLAARKAQTVDTSEDNINALLATEAWAKKPTEENRLRCKALGEKTQYKTAASWAATAANWCTGSMTPPGEPEVQPPPFLYAHAVAGCITLAAATIDPEAIDDYYKHFLAQGINLARGGNGLIEEA
>NZ_CP006829.1|WP_025264619.1|393627_393921_-|type-VI-secretion-protein
MGKPASRITDMHVCPMSSGPVPHVGGPIVSPGAPTVLIGNLPAATAGSMCVCVGPPDTIAMGSTTVLLSNKPAARMGDSTAHGGKIVLGCPTVLIGG
>NZ_CP006829.1|WP_025264629.1|420249_425787_+|hypothetical-protein
MAITPLRLIMPMILGCLIVPSAFAESGRADYDLDDDGLIEINSLADLDEVRNNLDGTSLYGDSTGCPVDGCIGFELTTRLDFDTNADGVMDANDAYWNGGDGWMPIGSSSTPFTSTFDGNGYQIRNLYINRSSTDYVGLFGYIYGESALLRNIGLTGDMMRVVGNNYVGGLAGYVNSAASIDQSYVTGAVTGDWYVGGFAGYLSNSAINNSFAIGAVTGDYFVGGLVGYFSSSTINSSFATGAVTGNSYMGGLVGANSTSITNSYWSVDTTGIRSASVSAATLAELQCPVSADNTSCVTDKTLYAEWDSGVWDFGTNVQLPGLILSGTTYRDSDSDGLLDEDDAFPNSRAASYDSDSDGHPDVWNSFCDRDCIVGSGLTLDRFPNNSAAWLDGDLDGFPDSWADSCDVNCQAASGLTLDSYPNDIDEDGINDDEDTDDNGDGIIDADSDSDGLIDVTSLEQLNAIRYNLAGSGRTLTDGGEADSSGCPPVIIDGALQFHCSGYELTSNLDFDTNADGVMDANDAYWNDGAGWMPIGSSSAPFTTTFDGNGHQIRNLYINRSHTNYVGLFGFISGESVLLRNIGLTGKLMKVQGYRYVGGFVGYADNAARIEQSYVTGAVTGYFLVGGFAGYLYGSAINNSFVTGAVTGDGVGGLAGYLDKSSAINNSYVTGAVIGGSSVGGLTGYNNGSVITDSYWAVDTTGIISTSALAATQAELQCPVGADNKSCVLDQTLYAGWDSGLWDFGTNAQLPGLILSGTTYRDSDGDGSLDGDDAFPNNHAASWDGDNDGHPDMWTIGCDANCISNSGLTLDQFPSNPAVWQDEDLDGYPESWVDGCDANCQTSSGLTLDSYLDDTDNDGINNSDDTDDNNDGITDADADSDGLIEVSTLEQLNAIRYNLMGTGRTLIEGEETDSSGCPVVVLDGVLQLHCSGYELTNNLDFDTNTDGVMDENDAYWDDGAGWESIGTDYDTPFTSTFDGNGHQIRNLYIDRSSTDYVGLFGFISGKSAQLRNIGLTGELMRVVGYKDVGGLAGYARSAARIEQSYVTGVVTGYRYVGGVAGYLYSSVINNSYVTSAVTGYNSVGGLVGSIISGSTINSSFATGAVTGNSSVGGLSGYSSSSVITNSYWAVDTTGIRSTSLSAATLAELQCPAGADNTSCVADQTLYAEWDSGVWDFGSNTQLPGLILSGTTYRDSDGDGSLDGDDVYPNNRAASYDSDSDGHPDVWNSFCDRECIAGSGLTFDRFPNNSAAWLDGDLDGFPDSWADSCDVNCQAASGLTLDSYPNDIDEDGINDDEDTDDNNDGVTDSDADSDGLIDVTSIEQLNAIRYNLAGTGRTLIEGEETDSSGCPAVILDGVLQHHCWGYELINTLDFDTNTDGVIDENDAYWNEGDGWEPIGTSSSLSFQAIFDGNGYQIRNLYINRSSTNYVGLFGYISGESAQLRNIGLTGELMQVQGYSYVGGLAGYANNAATIEQSYVTGAVSGSSSVGGLAGRSYSNSAINNSFASGAVTGDSSVGGLVGYFSSSTINSSFATGAVTGNSSVGGLVGTLSSSDISTNFASGAVTGNSSVGGLVGYSSSSTINSSFATGAVTGNSSVGGLAGYSNSYVITNSHWATDTTGQLNSDGESEFDNYFGATLAELQCPTSSDNTDDCVISNTLYAGWDSSIWDFGTSTQLPGLIINGIVYRDEDGNGSLDENQAPTVTLTLKQDGYVVSDITAGDGDVTLEATITDPDASDRHTLSWTYEGITVTSETDTGVTFKSDNLVAGEYTVSVVATDNRYSPLSAEAEITFTVYSAYVPEPAPAPGNTSTSSGKKGGGGALGLIWLMLCGGLVYTRQRRVVFAG
>NZ_CP006829.1|WP_025264630.1|426059_428165_+|TRAP-transporter-large-permease-subunit
MDQVANLKEPSAYRWLSTMPAFLILVLVVLLDTSNAIQGQLLLLGERTWEGYYQLRLDPVAPACDPSQDIEVALQRTLQKQEANAGDEMDLFAMEPIAPEVLRESLIASQKECRFRVDRYHEILERKTSSVAMYIAVEQWVADLGEFRMRASGIMLAVLLLICGGTALFRKHHISLRPALTVLDFRVSALVQMAAFGILFYSMASFKGVALSAGVNVVPEQLALLWIWIIGFGSAIAICLYQVIKVPADAERGGHIGNAILATPLYAIFTIISGSYFLFQGHASGIGIYINQMMELAPLMLNVALYVLIGMLLKRTDMAQKVFDVFRPFNLRPEMLAVVAVAVSAIPTAYTGGSGIFVIAVGSLVYMEVRRAGARRQLALAATAMSGSLGVVLRPCLLVVIVAALNNEVTTDQLFSWGVKVFLLTTALFAFYAFISSKKVSTSGDETLSTRNHGTKVLPQFLQALKPLIPYVMLIAGTLFIYALVLAAYLDEFSAPTILPVLLIVILAYERFANQQVRQQSSTPDVEEKPSLFATLQSSTSEATVHIGALLMLMGTTMTIGGVVERAELMAHLPVEFSSVWMAMLMLVAILVVIGMIMDPYGAVLLVSVTIAGIAYKAGIDPIHFWMVTLVAFELGYLSPPVALNHLLTRQVVGEEEIRLAKLETIGDNFWYRNEKILLPLVTMATALIIVAFGPLLWAEM
>NZ_CP006829.1|WP_015485580.1|428252_429842_+|peptide-chain-release-factor-3
MSDTPFYQEVASRRTFGIISHPDAGKTTITEKLLLFGNAIQLAGTVKGRKTGRMATSDWMKMEQDRGISITTSVMQFPYKDRMVNLLDTPGHEDFSEDTYRTLTAVDSVLMVIDGAKGVEDRTIKLMDVCRLRDTPIFTFINKMDREVRDHIEVMDEIETVLKIKCAPVTWPIGMGKAFKGVYNLLTDTVHVFQPGKGSVVPDDVRIEGLHSPESVAYLTQGLIDELQDEIELVQGASHEFDLEEYLAGNLTPVFFGTALANFGIREMLDYFVEWAPMPIPRETNERAIVPTETDFTGFIFKIQANMDPKHRDRIAFMRICSGTYTKGMKMRHVRIGKDIKIADAVTFLAGDRSAVEEAVSGDIIGLHNHGTIQIGDTFTSSGDLQFTGIPHFAPELFKRVRLKDPLKMKQLQKGLQQLSEEGATQLFMPVNNNDLILGAVGVLQFDVVQQRLRDEYKVECIYEPISVNTARWVYCKDHKMLEDFKRKAGDNLAIDGGGHLTYVAPTRVNLSLTEERWPDIEFRSTREH
>NZ_CP006829.1|WP_015485581.1|429960_430272_+|hypothetical-protein
MTLFFVAGSALTLLLCAAACWLLQHRVNKQTVSAHDAKGYLLIACIIVGFGVSAGCFAVGQQLGYQQQENTSEAMGLALLLDVMVALLALIVGLVVIKEPEQY
>NZ_CP006829.1|WP_015485582.1|430417_430849_+|50S-ribosomal-protein-L13
MKTYSAKPESVKREWFVVDAAEQTLGRLATEVARHLRGKHKPEFTPHVDTGDYIVVINADKVKVTGNKSSDKMYYRHTGYPGGLKSISFEKLIDHKPEMVIETAVKGMLPKNPLGRAMFKKMKVYAGSEHPHTAQQPQELKLG
>NZ_CP006829.1|WP_015485583.1|430853_431246_+|30S-ribosomal-protein-S9
MAVSQYYGTGRRKTSTARVFLRPGTGSIVVNKKSLDVYFGRETARMVVRQPLELTENLGKFDVIVNVQGGGGSGQAGAIRHGITRALMQYDETLRPSLRAAGYVTRDAREVERKKVGLRKARKKPQFSKR
>NZ_CP006829.1|WP_015485584.1|431466_432063_+|ubiquinol-cytochrome-c-reductase-iron-sulfur-subunit
MSQDGVNKTRRTLLVGATGAVGAVGAGFLAVPFVKSWLPSEKAKAAGAPAKVDVSKIEPGAMLTAEWRGKPVYIVRRTPETLDTLGTLAGRLKDPENSNKEQQPAYADNGFRSRKPELLVLLGVCTHLGCAPKYFAEVKPEPFDSDWKGGWYCPCHGSRFDLAGRVFNGSPAATNLVVPPYSYESDNVLVIGVDEENA
>NZ_CP006829.1|WP_144055406.1|432086_433295_+|cytochrome-b
MGWIDDRLPVTQTYEKHMSKYYAPKNFNFWYFFGVLSMMMLANQILTGVWLTMNFVPSAEGAFASVEYIMRDVEWGWLIRYLHSTGATFFFIAVYLHMMRAVLYGSYQKPRELIWIFGMLIYLALMAEAFMGYVLPWGQMSYWGAQVIISLFSVIPFGIGDALTEWIRGDFLISGATLNRFFALHVVALPLVIVGLVVVHLLALHEVGSNNPDGVDIKKLKDENGKPLDGIPFHPYYTVHDLVGIVVFLMIFCTVLFFFPEGNGFALEYANFEPANGLKTPAHIAPVWYFGSFYAILRAVPDKLLGVIAMGAAIAILFVLPWLDRSPVKSWRYKGWVSKIFIVVFGFNFVLLTWLGTQPATATLTSIAQVASVIYFSFFIGMPFYTRMEKTKPVPERVTGGH
>NZ_CP006829.1|WP_015485586.1|433297_434056_+|cytochrome-c1
MKKIFALIAAVIPAFALASGGDVHLDKHLTDLTDTASLQRGAQTFANYCMGCHATSHARYNRVARDLEIPEKLMMENLVADTDKRFGDLMTIAMTTEDAKQWFGAPPPDLTLVARVRRPDWLYTYLRSFYVDSSRPWGVNNVVFKDVGMPHVLAGLQGVQMRGTAQVAVDFDTLTGQEITEEHHDVLYLAEEGTLSASEYDKLVFDLVNFLTYMAEPIAVERERLGWWVLLFLAIFFVPVYMLNKEFWRDVK
>NZ_CP006829.1|WP_025264633.1|434151_434778_+|stringent-starvation-protein-A
MGVVAKRSSMTFYSDAADHYSHRVRIVLAEKGVAVEIHDIDPDNKPEDLASLNPYNSLPTLVDRELVLYEPNVMMEYLDERFPHPPLLPVYPVARAQSRLWINRIEKDWCGLIETILSGKGKDVDKARKELSDSLMAITPIFAEMPYFMSEDFSIVDCCVAPILWRLPVFGIELPEKASKPLLQYMERLFERESFQASLSEAEREMRD

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Crispr_ID: NZ_CP006829_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP006829_2

2257529-2257678

Orphan

Consensus_repeat	Method
AGAGAGCATCGACACCGATGGCGATGGCATTGGCAATAATGCCGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP006829_2

>merge|NZ_CP006829|2|2257529-2257678|CRISPRCasFinder
AGAGAGCATCGACACCGATGGCGATGGCATTGGCAATAATGCCGACAGCGATGATGACAACGATGGCATTGCCGACACTAACGATGCCTTCCCACTTGATACCTTAGAGAGCATCGACACCGATGGCGATGGCATTGGCAATAACGCCGA

>NZ_CP006829|2|2|2257529-2257678|CRISPRCasFinder
AGAGAGCATCGACACCGATGGCGATGGCATTGGCAATAATGCCGA	CAGCGATGATGACAACGATGGCATTGCCGACACTAACGATGCCTTCCCACTTGATACCTT
AGAGAGCATCGACACCGATGGCGATGGCATTGGCAATAACGCCGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP006829.1\|WP_025265757.1\|2250975_2251689_+\|electron-transport-complex-subunit-E	unknown	unknown	gnl\|CDD\|237091
NZ_CP006829.1\|WP_015486557.1\|2250283_2250979_+\|electron-transport-complex-subunit-RsxG	unknown	unknown	gnl\|CDD\|179350
NZ_CP006829.1\|WP_025265771.1\|2265229_2265430_-\|DUF4166-domain-containing-protein	unknown	unknown	gnl\|CDD\|379359
NZ_CP006829.1\|WP_155990857.1\|2255911_2257201_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006829.1\|WP_025265759.1\|2252842_2253847_+\|rhodanese-related-sulfurtransferase	unknown	unknown	gnl\|CDD\|223982
NZ_CP006829.1\|WP_025265772.1\|2268266_2269697_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006829.1\|WP_155990858.1\|2263391_2264542_+\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP006829.1\|WP_025265765.1\|2259026_2259626_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|366102
NZ_CP006829.1\|WP_025265760.1\|2253996_2254575_+\|RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|171568
NZ_CP006829.1\|WP_025265755.1\|2247023_2249216_+\|electron-transport-complex-subunit-RsxC	unknown	unknown	gnl\|CDD\|235334
NZ_CP006829.1\|WP_025265766.1\|2259653_2260493_+\|redoxin-domain-containing-protein	unknown	unknown	gnl\|CDD\|239268
NZ_CP006829.1\|WP_025265767.1\|2260489_2260843_-\|YkgJ-family-cysteine-cluster-protein	unknown	unknown	gnl\|CDD\|308985
NZ_CP006829.1\|WP_015485608.1\|2265488_2265788_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006829.1\|WP_025265761.1\|2254567_2255299_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227648
NZ_CP006829.1\|WP_015485607.1\|2265774_2266131_+\|IS66-family-insertion-sequence-element-accessory-protein-TnpB	unknown	unknown	gnl\|CDD\|377551
NZ_CP006829.1\|WP_025265768.1\|2261114_2263235_-\|methyl-accepting-chemotaxis-protein	unknown	unknown	gnl\|CDD\|223910
NZ_CP006829.1\|WP_081758314.1\|2267689_2268190_-\|DUF4166-domain-containing-protein	unknown	unknown	gnl\|CDD\|379359
NZ_CP006829.1\|WP_025265762.1\|2255295_2255955_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|275380
NZ_CP006829.1\|WP_025265758.1\|2251774_2252503_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006829.1\|WP_015486558.1\|2249231_2250278_+\|electron-transport-complex-subunit-RsxD	unknown	unknown	gnl\|CDD\|234844

Protein	Function_ID	Function_description	E-value
NZ_CP006829.1\|WP_025265757.1\|2250975_2251689_+\|electron-transport-complex-subunit-E	gnl\|CDD\|237091	PRK12405, PRK12405, electron transport complex RsxE subunit; Provisional.	1.63882e-121
NZ_CP006829.1\|WP_015486557.1\|2250283_2250979_+\|electron-transport-complex-subunit-RsxG	gnl\|CDD\|179350	PRK01908, PRK01908, electron transport complex protein RnfG; Validated.	8.82426e-75
NZ_CP006829.1\|WP_025265771.1\|2265229_2265430_-\|DUF4166-domain-containing-protein	gnl\|CDD\|379359	pfam13761, DUF4166, Domain of unknown function (DUF4166). This domain is often found at the C-terminus of proteins containing pfam03435.	2.22081e-10
NZ_CP006829.1\|WP_025265759.1\|2252842_2253847_+\|rhodanese-related-sulfurtransferase	gnl\|CDD\|223982	COG1054, COG1054, Predicted sulfurtransferase [General function prediction only].	1.49383e-157
NZ_CP006829.1\|WP_155990858.1\|2263391_2264542_+\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	1.57974e-66
NZ_CP006829.1\|WP_025265765.1\|2259026_2259626_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|366102	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family.	5.07376e-09
NZ_CP006829.1\|WP_025265760.1\|2253996_2254575_+\|RNA-polymerase-sigma-factor	gnl\|CDD\|171568	PRK12537, PRK12537, RNA polymerase sigma factor; Provisional.	1.11889e-34
NZ_CP006829.1\|WP_025265755.1\|2247023_2249216_+\|electron-transport-complex-subunit-RsxC	gnl\|CDD\|235334	PRK05035, PRK05035, electron transport complex protein RnfC; Provisional.	0
NZ_CP006829.1\|WP_025265767.1\|2260489_2260843_-\|YkgJ-family-cysteine-cluster-protein	gnl\|CDD\|308985	pfam03692, CxxCxxCC, Putative zinc- or iron-chelating domain. This family of proteins contains 8 conserved cysteines. It has in the past been annotated as being one of the complex of proteins of the flagellar Fli complex. However this was due to a mis-annotation of the original Salmonella LT2 Genbank entry of 'fliB'. With all its conserved cysteines it is possibly a domain that chelates iron or zinc ions.	1.10948e-05
NZ_CP006829.1\|WP_081758314.1\|2267689_2268190_-\|DUF4166-domain-containing-protein	gnl\|CDD\|379359	pfam13761, DUF4166, Domain of unknown function (DUF4166). This domain is often found at the C-terminus of proteins containing pfam03435.	9.01352e-06
NZ_CP006829.1\|WP_025265761.1\|2254567_2255299_+\|hypothetical-protein	gnl\|CDD\|227648	COG5343, COG5343, Uncharacterized protein conserved in bacteria [Function unknown].	2.24893e-22
NZ_CP006829.1\|WP_015485607.1\|2265774_2266131_+\|IS66-family-insertion-sequence-element-accessory-protein-TnpB	gnl\|CDD\|377551	pfam05717, TnpB_IS66, IS66 Orf2 like protein. This protein is found in insertion sequences related to IS66. The function of these proteins is uncertain, but they are probably essential for transposition.	8.1917e-50
NZ_CP006829.1\|WP_025265768.1\|2261114_2263235_-\|methyl-accepting-chemotaxis-protein	gnl\|CDD\|223910	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms].	1.50201e-63
NZ_CP006829.1\|WP_025265762.1\|2255295_2255955_+\|hypothetical-protein	gnl\|CDD\|275380	sd00033, LRR_RI, leucine-rich repeats, ribonuclease inhibitor (RI)-like subfamily. A leucine-rich repeat (LRR) is a structural protein motif of 20-30 amino acids that is unusually rich in the hydrophobic amino acid leucine. The conserved eleven-residue sequence motif (LxxLxLxxN/CxL) within the LRRs corresponds to the beta-strand and adjacent loop regions, whereas the remaining parts of the repeats are variable. LRRs fold together to form a solenoid protein domain, termed leucine-rich repeat domain. Leucine-rich repeats are usually involved in protein-protein interactions.	1.25244e-15
NZ_CP006829.1\|WP_025265766.1\|2259653_2260493_+\|redoxin-domain-containing-protein	gnl\|CDD\|239268	cd02970, PRX_like2, Peroxiredoxin (PRX)-like 2 family; hypothetical proteins that show sequence similarity to PRXs. Members of this group contain a CXXC motif, similar to TRX. The second cysteine in the motif corresponds to the peroxidatic cysteine of PRX, however, these proteins do not contain the other two residues of the catalytic triad of PRX. PRXs confer a protective antioxidant role in cells through their peroxidase activity in which hydrogen peroxide, peroxynitrate, and organic hydroperoxides are reduced and detoxified using reducing equivalents derived from either thioredoxin, glutathione, trypanothione and AhpF. TRXs alter the redox state of target proteins by catalyzing the reduction of their disulfide bonds via the CXXC motif using reducing equivalents derived from either NADPH or ferredoxins.	1.36335e-19
NZ_CP006829.1\|WP_015486558.1\|2249231_2250278_+\|electron-transport-complex-subunit-RsxD	gnl\|CDD\|234844	PRK00816, rnfD, electron transport complex protein RnfD; Reviewed.	9.17528e-170

>NZ_CP006829.1|WP_155990857.1|2255911_2257201_+|hypothetical-protein
MMLLSSMMVMPKIGKPIFLSTILITLLAVIATTSQPVAALEYTLENHTFELGARARLARVDAEENARAASLLIRLRATSEWSQQFSTLFELDSVALGWQDEFSNGEHFNGHPVIPDVAGTDLNQALLRYSPTNTLQLTLGREALNLGNQRFVGTNGFWQNEQTLDTAGFKLEFGSASNVMYRYVDNANRINGQDAGKKLSPTDSNYAANNGIRPPQFLGDHDHNTHLVFAHFKEWDLSQIDAYYFDMEIKDAKALSNQTLGLRYEYKGRWNTLRTLAHAELALQERTDIRNDALLQFYDVGGGVGFGSNEITLNIQRLGEKNGVSFVTPLASLHDHNGWADKFLLTPSTGLRDYSLQYIWRQNPIKIDARYHRFNTDTDNSRIGEEFDIDVAYKFNRENIVLLRFADFTTSDDSYADEQRVFLMFTHNL
>NZ_CP006829.1|WP_025265762.1|2255295_2255955_+|hypothetical-protein
MMTINSPNWLSVLAIFILTGIRPVYAATFDVQDRALHACLQALAENNGWSKPEDVTEIKCHSKDIHSIAGVEQFTQLQSLSLYNNKLEQLDVDLTLLKQLKTLNLARNNLTRLNLTNLPNLSELYLFDNQLETLTLSNLVELKTLKTNNNKIEHFTYLNMSQLEKVYIFNNKLATVDIYSLPKLQYMDCRQNPMPDSLYDEMDKKNDVTFLHDGNAEDW
>NZ_CP006829.1|WP_025265761.1|2254567_2255299_+|hypothetical-protein
MINADDKNALALEYVLGTLRGEEREAFAKQLRSDDSLMQAVRYWEQSLMPAPESVPSLAPNPDTFAKIQARINNNEQSTAQEKSVTFWEKLLPWKIVTGAAFAMLLLMSGLLLNNSINQNVGLNADYVAVLVDNNDAPILTALTSSNGKTLWLKWEDWQAPQDHSLQLWAKSRRDGQIRPLLVFNNREQKEIQIDEATLRLIRDSSDLIITKEEQGGSPLDEPSDIVIAKGVCIRLAITKDSA
>NZ_CP006829.1|WP_025265760.1|2253996_2254575_+|RNA-polymerase-sigma-factor
MDNEMLMNLIARCALREQKALEALYQAAAAYLNGVAFRILGSADSSNDVLQESFVQIWNNAASYTPAQGNPTTWMTSIVRYRAIDKLRHEARHQNRPHHEAETEILLNTPTEETQEEIYSRFRLNAQLKKCLESMNDKFKQSLELAYLYGYSREELADVLDTNINTVKTWLKRGGAKLKVCMEGENGGSNND
>NZ_CP006829.1|WP_025265759.1|2252842_2253847_+|rhodanese-related-sulfurtransferase
MTEHTPFVVCAMYKFVTLNDFELLQKPLLDEMLRLDVKGTLLLANEGINGTVAGSREGIDALLDYLRRDERLADVGTKESFDDEMPFYRTKVKLKKEIVTMGVEGIDPKRVVGTYVKPKDWNALISDPDVILVDTRNDYEVGIGTFKGALDPNTKTFREFPQYVKENLDPQKHKKVAMFCTGGIRCEKSTAYLKEQGFDEVYHLEGGILKYLEEVPKEETMWEGECFVFDNRVTVDHDLQKGHFDQCHACRRPITEDDKQSEHYVQGVSCHHCIDEYDEAQRERFRQREHQMQLAKARGEDHLGNDLAAIIEKRRLEKLALKNQQRKHDGKTNA
>NZ_CP006829.1|WP_025265758.1|2251774_2252503_-|hypothetical-protein
MWISLCSITLMGFLLGVAYHRYSARWTGASGSYNGIGYQFSLFKFSLFSSSFEMLGVEAPLGYDFVIKRETRMDRLFRILGISSKSTVGNAEFDEQVYLVSDNYSMHQVLAAQPHLQQVIMNILYRQPVDGDIERIVCRHGRMWACIYGKATPAAEAVIVQRMIPALNKLGKGMEKYAGGLSPQRRDRINAMAVLFLFATSAILLNGSLSFAQPLLSSFFSDVDSVLRLSQTNLPQFAAVRG
>NZ_CP006829.1|WP_025265757.1|2250975_2251689_+|electron-transport-complex-subunit-E
MSEKSLSDISLDGLWNNNPALVQLLGLCPLLAVTGSVVNALGLGLATMMVLVGSNFSVSLIRNHVSDAVRLPAFVMIIASFVTVAELVMQAFTYELYEVLGIFIPLIVTNCAILGRADAFACKNPILPSVVDGFMMAMGFTVVLVILGAMREIIGQGVVFSNMDLLFGPSAAHWKIELISGYPDFLFAILPPGAFVAMGLLIAGKNIIDARIKRRAEAQKLPVQAGAKRARVTGKIS
>NZ_CP006829.1|WP_015486557.1|2250283_2250979_+|electron-transport-complex-subunit-RsxG
MKELFASIRKNAIGLGLFAIVTAGAIAVAQVFTADRIDHNRRAAEARALNDIVAVGSYDNDLLNDVISVDSRFNQQLLGPLPEDAQIHLARQQGEVKTVILPVIAPDGYTTEIGIIVGVNRDGTIAGVRVVSHRETPGLGDKVDIRKSKWVLDFNGKSLLNPKADSWAVKKDGGEFDQFTGATITPRAVVRAVKKALLFFNMHKELLLTSRLVEPTSAASTSLNNKERDAK
>NZ_CP006829.1|WP_015486558.1|2249231_2250278_+|electron-transport-complex-subunit-RsxD
MALLTLSSPHTHGPNRTGRLMLTVALATLPALAVMTVFFGYGTLINVVLASLVAVASEALMLTLRKRPVMFFLRDNTALVTGVLLGLALPPFAPWWITVLATAFCIIFAKHLYGGMGNNPFNPAMIGYALVLVSFPVQMTTNWALSFQMSGHDVLPFFDTLKTIFTHSGLVDGYSGATPLDDYKHLISTETANSLLQKATFNGWLNGGWEWVNLAFMAGGLFLMFKRIITWHIPVSLLIALSTCSLVFGWDADMYTPLSLHLLSGATMLGAFFIATDPVSASTTPRGKLIYGAGIGILLYVIRTWGAYPDAVAFAVLLMNFAAPFIDAYTQPRTYGHKKARRGLTAKD
>NZ_CP006829.1|WP_025265755.1|2247023_2249216_+|electron-transport-complex-subunit-RsxC
MTHQIRIFDFDGGIHPAENKAQSTQRPIRLAPIPPELVLPLHQHIGAAAKPIIAVGDKVLKGQLIAEAAGFVSVPLHAPTSGEVIAIEPRLVPHASGLSEDCIVIRPDGADRWIERQGLLEQLGVDDFTDIPAAQLVSHIRNCGIAGMGGAGFPTAVKLNIGQRNIGTLILNGAECEPYITADDMLMRERAHEVVRGAQILLHILNASQCLIGVEDNKPNAIAALNAALVDLHEEHHIDVVVIPTKYPSGGEKQLIQILTGEEVPAGGIPADLGIVCQNVGTASAIARAVDHGEPLISRIATVTGDAVHSAGNWEVLIGTPVGELLELADYTVQKRERVIMGGPMMGFALPSLDIPVVKTTNCLLAPTEKELPTNKASMACIRCGMCADACPADLLPQQLYWFSKAEEFNKAEQHNLFDCIECGACSYVCPSEIPLVQYYRYAKGAVREERAAQAKADQARERFEHRLARQEREQAEKEAKRKARAEKAAQAQSAKADAPAVTDGVVPAPSADLEKLQKQFDASQAAIAKTKEKLEAAKSDPEQADKVALFEAALVKTQDKMKDLAKQLAVAKKAAKAAPAAESDADKGDPNSPERLKKKWDMAQTRLDTAEKRLAEAREQGADTVTALETGVEKQRARVDEAKAAYEAALAAPAASTESQVATATAVDADALAKKILAQTDRLEKAKERLAMAEQEGLDTVDALTMAVNKQQDKLTQLQQQAESASENP
>NZ_CP006829.1|WP_025265765.1|2259026_2259626_+|TetR/AcrR-family-transcriptional-regulator
MARPLQFDRQKAIDAAMGVFWEQGYSASSLQQLLDAMQINRGSLYAAFSDKAGLFKEVIDNYQSRIQAIVIRLLSNELDPAKGIKDVFELTLLALTKDSLALGCLLVNTINELSPIDSDLANHAAKKLDAVEQAFITACKRAQTLNQMTTEITPESAGKMLMTSMIGLRVQSRRGVEISDLEQSISPLLNMLMPTLDKR
>NZ_CP006829.1|WP_025265766.1|2259653_2260493_+|redoxin-domain-containing-protein
MNRLKSLFLSTWITLLAIGVIRGLWVLTQETEATVWYWAVFALASPLIFFAWIFLTNVARTAMASKATFAITLFAFIGALATSISTSEPLIWILVVAVIGSALYEWWYSRFGERSSAILIVGKVLPNLELMNTEGAVIKTNELNKPLLLIFYRGNWCPLCMAQIKEVATQYRELAEKGVEIMLISPQPQGHTASLAQRFDAPMSFLVDHDNAMAKRLGIAALNGLPVGLEALGYDSDTVMPTVIMTDASGKILFADLTDNYRVRPEPDVFLNVFTAAGI
>NZ_CP006829.1|WP_025265767.1|2260489_2260843_-|YkgJ-family-cysteine-cluster-protein
MDTNRNIIARLRERIPTFECVEGCHDCCGPVTTSSEEMSRLPVKTDAEHEAAWEHLNCVHLGPNGCTVYDERPLICRLFGTTPRMPCPNGRRPEVMIDTKTEKQIHHYIANTRQVLV
>NZ_CP006829.1|WP_025265768.1|2261114_2263235_-|methyl-accepting-chemotaxis-protein
MKSLALKTKLFAITLSAILLLAVALTWRSYQGITSLSEQLQIHSEENLTNAVIAQLQTKTQAYGEQISNYINAAYRIPTTMAAVIKTAIENGDSSRAQISELMGAALKVNKDVSSIYAQFEPNGFDGRDDEFVDSGLIYNAESTGSLEIYWIRDQSGQVEQQKVDDPNEKYLADLNEFGIRQSEWYLCGRDTKASCLMEPYLYEISPGYEELMTSLTAPIVVNGAFRGIAGVDVNLPIFQKLVEELSQSLYSGQARVTVLSEMGLVVASSHYKDKLMRPLNESLPETGDTLSQLHKGEGLLTGKDNLYVARGLKIPASNSEWSLLIELPLNVALADLETLQTLVADEKTKVLGSQLLLALLLAGAALAAITVLIQSITKPLAVLNKQVEQLSSADGDLSQRLQLDTHAELISLSGGFNRFLSKLRDLVLALKGVSLEVRNESAENLSISQKTRKATDQQQSEMDNVVTATQEMSATALEVSRIASDVADRANDIHTTVTASQKNLSTAVDTVLELSENMHTASESITKVSARSDDINRILVVIRSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASKTQESTEEINSMIGSLQSEVKAAVSIIDSGSQKAGQAMESTHEAHGSLQNVVHAISDIADHIRQVASAAEEQSSVSGEITRNLTVIGDATTMLAELAQDANKSSHKVTDQLDRLDKQLSELRT
>NZ_CP006829.1|WP_155990858.1|2263391_2264542_+|IS3-family-transposase
MAGERYNEEFKIAAVKQVTEHGYSIADVAQRLGITTKSLYNWRDRYGENAQAYHEKQSSHEELRKLKAELKRVTEERDILKEAAVFFAAESKKYTFIKSRTDRYSVRTLCRTLEVHPSGFYAWLANPESTRQKVDEYLLGFIKQFWLESGCVYGYRKIHKDLKHAGEHCGKNRVHRLMQQAQIQAERGYNRKTRYDSGELSTVAPNLLNREFDVSKPNTVWVTDITYIRTYEGWLFLAVITDLFSRQVVGWSMSERINTDLVLNAITMACWRRKPKGEVIVHSDQGCQYTSYDWQSMLKANNLTVSMSRRGKCHDNACAESFFALLKRERIRRKIYRTREEGKADIFNYIELFYNSTRRHGNNNDLSPRDYEKNYFLKQMGV
>NZ_CP006829.1|WP_025265771.1|2265229_2265430_-|DUF4166-domain-containing-protein
MGLGERLLWRCLKVNFLGFSIPRWLIPKTNAYKTIENGKYCFHVEFSLPIIGTLVSYQGLLRAENT
>NZ_CP006829.1|WP_015485608.1|2265488_2265788_+|hypothetical-protein
MTKSEQWQQHLNLWHESGLSQVAFCQQHNIAVHNFQYWRKRLSPKTESTKTKALIPITLTSSAPARLRLGSQVLIELSVEALPDLLVALNDRGLLYASA
>NZ_CP006829.1|WP_015485607.1|2265774_2266131_+|IS66-family-insertion-sequence-element-accessory-protein-TnpB
MLRPSASVQVYLYAGAVDMRKSINGLSALIEQELELNPMINALFVFCNRNRDKVKLLYWERNGFVLWYKRLEKQRFKWLKPTDTASLCIDGYQLNLLLDGLDIFNNKPHETLFYSAIN
>NZ_CP006829.1|WP_081758314.1|2267689_2268190_-|DUF4166-domain-containing-protein
MPNVLVKNWFGDKFSNLHPLLQKLHTEGGRLTGDVEISYGKGLAGVIGVRLAKKMSLPSEGTHQLVVSISHDIDGLHWDRCFNNQALVKSLFKPVGHVEDGYWIETTGPLSMKLTVDINDGGWFWRVSAQATPPTNLNNRQFYIFRQQFFNIFHRFTVRQSRQYRT
>NZ_CP006829.1|WP_025265772.1|2268266_2269697_-|hypothetical-protein
MASSRKKKEVPDHVKLLGITDRYLVDLECLREMFSTVIPVLREQDDLRHKAVKEIFKRAEKVSEEETQEQESSALKDSGSDKLDSDSDSNEVNSPKKSFKISFGPKDAENLISNVRKIKRAETLFAKQSIVSFVSRFDEFLGAFLEIALAQNPDWLKSSEKTITYKQLIELKSIDTAIKGVIAKEVENLLRGSHEEHISYIDEKLKLGIRDHFPNLSCFLEVAERRNLFVHTGGQVSNQYLDRCRGFKYPVNDIKEGQELEVSDDYFEKAFNVFFEIGLRIGQAAFRRLFPDEVATADSALNKLAIKFLNYGDNELAELITNYELNIPQKLRSDDSENEYYARINRAIAQKRQGKDFEPGLDGVPWKAFHSKYKLCLHVLRDELQEAAALMSSDDVIDEVGIEGFRTWPVFQDFRSTEEFREAYKQAFDHEYTPDPERDAQTIARQEEVVEPEPDTQKYDGNDSIEINPEHDGVCG

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Crispr_ID: NZ_CP006829_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP006829_3

2508225-2508335

Orphan

Consensus_repeat	Method
GTCCGCCATCTATTTATAGATCCCCTTTTA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP006829_3

>merge|NZ_CP006829|3|2508225-2508335|CRISPRCasFinder
GTCCGCCATCTATTTATAGATCCCCTTTTATACCCTTTGTTTTTGATGATCACAGCGAGTCCCACGGGATGCCGCCCAGTCGTCCGCCATCTTTTTATAGATCCCCTTTTA

>NZ_CP006829|3|3|2508225-2508335|CRISPRCasFinder
GTCCGCCATCTATTTATAGATCCCCTTTTA	TACCCTTTGTTTTTGATGATCACAGCGAGTCCCACGGGATGCCGCCCAGTC
GTCCGCCATCTTTTTATAGATCCCCTTTTA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP006829.1\|WP_025265936.1\|2516070_2518698_-\|aminopeptidase-N	unknown	unknown	gnl\|CDD\|237585
NZ_CP006829.1\|WP_025264738.1\|2491974_2493549_-\|IS1182-family-transposase	unknown	unknown	gnl\|CDD\|372705
NZ_CP006829.1\|WP_025265928.1\|2499667_2500462_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006829.1\|WP_015486316.1\|2508621_2509674_-\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|378890
NZ_CP006829.1\|WP_025265935.1\|2514591_2515974_-\|DUF1329-domain-containing-protein	unknown	unknown	gnl\|CDD\|377764
NZ_CP006829.1\|WP_025265937.1\|2518717_2519539_-\|DUF2797-domain-containing-protein	unknown	unknown	gnl\|CDD\|378524
NZ_CP006829.1\|WP_025265938.1\|2519564_2519810_-\|DUF1315-family-protein	unknown	unknown	gnl\|CDD\|225681
NZ_CP006829.1\|WP_025265931.1\|2504212_2507317_+\|efflux-RND-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|223911
NZ_CP006829.1\|WP_025265933.1\|2510650_2513122_-\|RND-family-transporter	unknown	unknown	gnl\|CDD\|223964
NZ_CP006829.1\|WP_015486319.1\|2501010_2502924_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|236861
NZ_CP006829.1\|WP_025265932.1\|2509689_2510547_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006829.1\|WP_025265925.1\|2493729_2494248_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006829.1\|WP_025265929.1\|2500537_2501014_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006829.1\|WP_025265927.1\|2497151_2499299_-\|fatty-acid-oxidation-complex-subunit-alpha-FadB	unknown	unknown	gnl\|CDD\|183293
NZ_CP006829.1\|WP_015486308.1\|2519799_2520642_-\|rhomboid-family-intramembrane-serine-protease	unknown	unknown	gnl\|CDD\|275075
NZ_CP006829.1\|WP_025265926.1\|2494882_2495728_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006829.1\|WP_025265934.1\|2513137_2514355_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226855
NZ_CP006829.1\|WP_081758325.1\|2503037_2504216_+\|efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|273776
NZ_CP006829.1\|WP_025265939.1\|2520641_2521598_-\|serine/threonine-protein-phosphatase	unknown	unknown	gnl\|CDD\|277358
NZ_CP006829.1\|WP_015486323.1\|2495951_2497127_-\|acetyl-CoA-C-acyltransferase-FadA	unknown	unknown	gnl\|CDD\|181592

Protein	Function_ID	Function_description	E-value
NZ_CP006829.1\|WP_025265937.1\|2518717_2519539_-\|DUF2797-domain-containing-protein	gnl\|CDD\|378524	pfam10977, DUF2797, Protein of unknown function (DUF2797). This family of proteins has no known function.	2.63593e-141
NZ_CP006829.1\|WP_025264738.1\|2491974_2493549_-\|IS1182-family-transposase	gnl\|CDD\|372705	pfam13751, DDE_Tnp_1_6, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis.	2.72604e-25
NZ_CP006829.1\|WP_025265936.1\|2516070_2518698_-\|aminopeptidase-N	gnl\|CDD\|237585	PRK14015, pepN, aminopeptidase N; Provisional.	0
NZ_CP006829.1\|WP_015486316.1\|2508621_2509674_-\|AraC-family-transcriptional-regulator	gnl\|CDD\|378890	pfam12625, Arabinose_bd, Arabinose-binding domain of AraC transcription regulator, N-term. AraC is a bacterial transcriptional regulatory protein with a DNA-binding domain at the C-terminus, HTH_AraC, pfam00165, and this dimerization domain which harbours the arabinose-binding pocket at the N-terminus. AraC positively and negatively regulates expression of the proteins required for the uptake and catabolism of the sugar L-arabinose 1,2,3].	2.10891e-34
NZ_CP006829.1\|WP_025265935.1\|2514591_2515974_-\|DUF1329-domain-containing-protein	gnl\|CDD\|377764	pfam07044, DUF1329, Protein of unknown function (DUF1329). This family consists of several hypothetical bacterial proteins of around 475 residues in length. The majority of family members are from Pseudomonas species but the family also contains sequences from Shewanella oneidensis and Thauera aromatica.	0
NZ_CP006829.1\|WP_025265938.1\|2519564_2519810_-\|DUF1315-family-protein	gnl\|CDD\|225681	COG3139, COG3139, Uncharacterized protein conserved in bacteria [Function unknown].	2.22262e-22
NZ_CP006829.1\|WP_025265931.1\|2504212_2507317_+\|efflux-RND-transporter-permease-subunit	gnl\|CDD\|223911	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms].	0
NZ_CP006829.1\|WP_015486319.1\|2501010_2502924_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|236861	PRK11147, PRK11147, ABC transporter ATPase component; Reviewed.	0
NZ_CP006829.1\|WP_025265934.1\|2513137_2514355_-\|hypothetical-protein	gnl\|CDD\|226855	COG4447, COG4447, Uncharacterized protein related to plant photosystem II stability/assembly factor [General function prediction only].	4.7192e-23
NZ_CP006829.1\|WP_015486323.1\|2495951_2497127_-\|acetyl-CoA-C-acyltransferase-FadA	gnl\|CDD\|181592	PRK08947, fadA, 3-ketoacyl-CoA thiolase; Reviewed.	0
NZ_CP006829.1\|WP_025265927.1\|2497151_2499299_-\|fatty-acid-oxidation-complex-subunit-alpha-FadB	gnl\|CDD\|183293	PRK11730, fadB, fatty acid oxidation complex subunit alpha FadB.	0
NZ_CP006829.1\|WP_025265933.1\|2510650_2513122_-\|RND-family-transporter	gnl\|CDD\|223964	COG1033, COG1033, Predicted exporters of the RND superfamily [General function prediction only].	9.51027e-124
NZ_CP006829.1\|WP_025265939.1\|2520641_2521598_-\|serine/threonine-protein-phosphatase	gnl\|CDD\|277358	cd07413, MPP_PA3087, Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain. PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.	1.62257e-82
NZ_CP006829.1\|WP_081758325.1\|2503037_2504216_+\|efflux-RND-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|273776	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit. This model represents the MFP (membrane fusion protein) component of the RND family of transporters. RND refers to Resistance, Nodulation, and cell Division. It is, in part, a subfamily of pfam00529 (Pfam release 7.5) but hits substantial numbers of proteins missed by that model. The related HlyD secretion protein, for which pfam00529 is named, is outside the scope of this model. Attributed functions imply outward transport. These functions include nodulation, acriflavin resistance, heavy metal efflux, and multidrug resistance proteins. Most members of this family are found in Gram-negative bacteria. The proposed function of MFP proteins is to bring the inner and outer membranes together and enable transport to the outside of the outer membrane. Note, however, that a few members of this family are found in Gram-positive bacteria, where there is no outer membrane. [Transport and binding proteins, Unknown substrate].	3.16863e-38
NZ_CP006829.1\|WP_015486308.1\|2519799_2520642_-\|rhomboid-family-intramembrane-serine-protease	gnl\|CDD\|275075	TIGR04239, GlpG_protein, rhomboid family protease GlpG. GlpG in E. coli is a rhomboid family intramembrane serine protease that has been extensively characterized as a proxy for rhomboid family proteases in animals. It efficiently cleaves eukaryote-derived model substrates. This multiple membrane-spanning protein excludes inappropriate substrates from access to its cleavage site, and shows activity against truncated versions, but not full-length versions, of the E. coli multidrug transporter MdfA. This finding suggests a housekeeping function in removing faulty proteins. In contrast, several eukaryotic rhomboid family proteases release peptide hormones for signaling functions, and the Shewanella and Vibrio protein rhombosortase appears to be part of a protein-sorting system, cleaving a C-terminal anchoring helix domain.	1.89506e-31

>NZ_CP006829.1|WP_025265931.1|2504212_2507317_+|efflux-RND-transporter-permease-subunit
MMALIRAAVDRHRTVIMLFVLTLIAGATTLYQIPKESAPDVTIPQVYVSVVHDGISPDDADSLLYEPLETQLQGLEGLKEMTSTASFGHLSIQLDFYSNVDIDKALEDVRNKVNDAVGELPVDSKEPVIREINVALFPVMVVTLSGAVDENVLYGAADALKDKIEALPGVLEVNIQGKREQIAELIVDPARMDNYGLSLSEVGQLLSNNSLLVASEDLDSEAGRFGIKIPGRIDDIEGLMRLPVKVTDDHVALFQDIAVGRLSFKDKTSAARVNGVQAVTLDIKKRIGANIIETLDEVREITAQAQEILPEGMTIGIIQDESKQIRTMLNDLFNSVLVATLLVFILILGSLGVRSSLLVGLAIPGAFLMGIMALAAMGHTLNMVVLFALILSVGMLVDSAIVVVEYADRRLAEGASAKDAFTEAASRMAWPIIASTATTLAVFLPLLFWPGIMGGFMKFLPLTLLFTLTGSLIMALIVMPAIGKTLGQAKHHDNDSLDSIIAAEQGDFGKLKGFSGGYVRVLSKALKAPAMTTLIVLASVFGSFFIYSVLGHGSEFFPDVDADVAMVDVRARGNLSIAERETLVRDVENQIFDMAEIDAIYTSVFAHAPRGGMESSPPDLIGRIQLELIDWESRRPAVEILKEIEQRTAHIPGLIIETRKKDGGPAGGAPIQLQLSSNTEANLLPMVEKVRAMLEADPDLKDVRDDRPLQGVEWRIDIDREEAVRYGASVAEIGSLIRMVTGGQLITKFQPDYSDEELDILLRYPGSKRTIDLFTDLNIHTDKGLVPISQFVKRTPIERTGDIVRADGKRRYLITANVKDGVNANAKIAELGEQAKEIDWQAAGVEPKFRGDSEEQAETGIFLVSAFAIAIFMMVTILVTQFNSFYQAGLIMSAIVLSIAGVLMGLLIRGEPFGIVMSGVGVIALAGIVVNNNIILIDTYNQFKKTGLTAFDAALRTGAIRLRPVLLTAVTTIVGLMPMVLQWNIDLIHREFSIGAPSSQWWTQLSTAIAGGLTFATVLTLILTPALLVWRDRE
>NZ_CP006829.1|WP_081758325.1|2503037_2504216_+|efflux-RND-transporter-periplasmic-adaptor-subunit
MIEPKQPVVSGNDFFRQRLISPSAKYLSGITIMPIQINRSHVIAILIALLLVVWVVSGDAAEPDVADRPLNNQETSFKVGYEVFVPTQKASNVRISAHISANRSVDVVAEINGKVTALPLKRGALVNQGDTILEIDQRDLPAKLKQAKARLEQRQLETASVRNLYERGLTNQSAIASAEAELAEAEAIVTRARLDLEATRVKAPFSGVYDQRFVELGEYASVGQTLVRVVDNATMLIKGSVSENNINQIRKGTEAYAILPDDTRLTGTIRFIASSADAKTRTYPIEMEVTEAPAPLFDGQTATLFVPQGKVDAYFVSPSLLIITDNGGLGLKVITAEDTVAVVPVSILSAETNGIWIQGPTGEQRIITVGQGFVTVGEHVNAVLLNKEASQS
>NZ_CP006829.1|WP_015486319.1|2501010_2502924_-|ATP-binding-cassette-domain-containing-protein
MVLVRLLQVELAFGDHVLLNKVDLDIHSGERVCIVGRNGEGKSTLLKVLTREISPDDGRVQHRDMLRTATLQQELPKAEDIAVYDVVAQGLGDVGKVIAEYHEEIAKGMDTNMNRLERLQTEIEANDGWRLQQRVDAIIQKLNLPEEARFNELSGGWQRRVMLARALVTEPDVLILDEPTNHMDVPTIEWLEEQLKQFNGALVFISHDRAFVQALATRIIDLDRGHIYSWDGDYRSFIEYREKRLEEEETQNALFDKRLAEEEKWIRQGVKARRTRNEGRVLRLKEMRNERSARRNQVGTANISMSAAESSGKQVFEIDDISYAWKDIQQVNHFSSKVIRGDRIGLVGPNGVGKSTLLKLLLGNLQPQSGSIRLGTKLEVSYFDQSRHQLDGDRSIADNVSDGRDQVEVNGQSRHIIGYLGDFLFSGARARTPVKALSGGERNRVLLAKLFLKPCNLLVMDEPTNDLDVETLELLEERLLEYQGTLLLVSHDRAFLDSVVTHLWVFGENGQIEEHVGGYSDWQNWLKTQPAEEQNKAAKHAASAKPDPKKTESVSAPQAATERKKLSYKLQRELDNLPQDIAKAEAKRDELAAQSSAADFYNGDPETIQKTLAALVDAEAAIEALEERWLELEAMTE
>NZ_CP006829.1|WP_025265929.1|2500537_2501014_-|hypothetical-protein
MIWPVVILVVLVVFGSVYWMKPSPRDTRLAALRLDAIKRGLHVRQFKFKPESAKNGVRDEVWGTSFTYVRPGRQQGGELRFRVVGQAAWDSEGLPEGLAWHDKGTPAEAALLCDKIGTLNDEIIMMEVFENRATIMTAEHKAATAESYEQFLKAFLPE
>NZ_CP006829.1|WP_025265928.1|2499667_2500462_+|hypothetical-protein
MNKLVTSLFFTLAILLFSPLLRADPQTILVEMQTMRLAATNAVTSFYMFSGLDADSKYAQRIDTNFERFEASLEQVGLQAQAIGLVDEVATIEHDWAEFKQLTNNNRADMLNVGYPNERLVDDMGRKSLALVNLISSSYAKLASTSGMAPPAIVQQARNMALLMEEITSQYAARGTSVSGFMFVGAHKRSLVDMADKFQQDYLTLRKLTKNKSSLVILDSIGSKWKFMERSIRNHNENSVPFLVVSYNDRIVGHLQELDDSYHK
>NZ_CP006829.1|WP_025265927.1|2497151_2499299_-|fatty-acid-oxidation-complex-subunit-alpha-FadB
MIYEGKAITVTMIEGGIAELKFDLQGDSVNKFNRVTLEDLKASVAAIQGNSDVKGVLVTSGKDVFIVGADITEFGEAFKQSEEEIAAWGLEANQIFSAIEDLPVPTLTAINGIALGGGFEMCLSTDLRVMSDKAKVGLPEVKLGLMPGFGGTVRLPRVIGADNAIEWICMGAENKPEKALKDGAVDSVVTADKLKEVSIAMLQSAIAGEINWQARREEKTSKLKLDTLEQMMVFETAKGFVAGQTKGHYPAPIVAIKSMQKAANFGRDKALEVEAKGFAQLAKTSESNALIGLFMNDQLLKKKAKDYDKAAKPTNMAAVLGAGIMGGGIAYQSALKGTPILMKDIAEAGIELGLNEANKLLSKRVERKKMKPAQMGEALNRIRPTLTYGDFGNVDTVVEAVVENPKVKKMVLAELEDNVRPDTIITSNTSTISIDLLAADLKRPENFLGMHFFNPVNMMPLVEIIRGAKTSPEAVATVVSYAKKMGKTPIVVNDCPGFLVNRVLFPYFAGFAGLVRHGADFQTVDKVMEKFGFPMGPAYLLDVVGIDTGHHANEVMAEGFPDRMKADFKSAMDVMYEENRLGQKNGKGFYVYETDAKGKPKKTVDAGVYDLLKPVVAESREFTNEELIERMMIPMCIEIARCLEEGIVDTPAEADMGLIFGIGFPPFRGGACRYMDSLGMANFVASCDKYAELGNLYKPTDRMREMAANGESYFG
>NZ_CP006829.1|WP_015486323.1|2495951_2497127_-|acetyl-CoA-C-acyltransferase-FadA
MSYNPKDVVVVDAVRSPMGRSKGGVFRNVRAETISANVINALFERNPGVSPALVEDIIWGCVNQTLEQGFNVARQIGLMTVVPKEAGAQTVNRLCGSAMSAIHTAAQAIQTGNGDVFVVGGVEHMGHVNMQHGFDHNPEASKFSAKASNMMGLTAEMLGKMHGITRQQQDEFAARSHRLAQKATDEGKFKNEIVPMFGHDADGKEILVTQDETIRPETTAESLGKLRPAFDPKSGTVTAGTSSQITDGASAMLLMSYEKAMELGLKPRARIVAMAVAGVDAAIMGYGPVPATKKALKRAGLETTDIDYWELNEAFAAQSLPCVKDLKLKEIAEDRINIHGGAIALGHPLGCSGARISTTLINVLEQNNGKYGVSTMCIGLGQGIATVWERM
>NZ_CP006829.1|WP_025265926.1|2494882_2495728_-|hypothetical-protein
MKLPLLSCLVLLTPVSAFAELVPASDFELASATGQAGVDLTLDFDLSIGEIKYTDDDVFDGGSLSVSGVTLGGGAGRTTLFGEAVTNTSRIDNLTFAIDVDSTGALVIDGGSNGANGEQFVDFNIHVDQVALKNASNQVGAVLVDSMNIYGALGQFRTVISEQEWQFNGLPVNRTTITGDLSFGIDDLDLDLSSMLGVQIYDAVLLGGDYIDDTPGSSLASFHYSIAAFDEGVGIDFKGGSAGQNVFDLVMPTVYVGNGLIGGITLDDVSIRGVDLFIAGH
>NZ_CP006829.1|WP_025265925.1|2493729_2494248_-|hypothetical-protein
MQIQDWLMIGAVLVGPIIAVQLTRFIDNKREMRNRKLHVFKTLMATRAYAVSPKHVEALNRIDLEFSNKHKKEREVVYAWKEYLDLLGNKDMPRDQWDTKRVDLLVDLLHKMARVLDYEFDKTHIKNSAYAPIAHGDIEDQQRALRVGLIEVLDGKRIIPLHVTNFPSENED
>NZ_CP006829.1|WP_025264738.1|2491974_2493549_-|IS1182-family-transposase
MPKFKPYNYNQTSMVVINYQDQLQLGTFEHAIHYLIDQKLDLSIFNPNYKNDDGGRPAYDPAILLKIILFAYSKGITSSREIQWCCETNIIFKALSCDSVPHFTTIASFVSSYPKAIEELFEQILLICHQQGLLGNELFAIDGCKMPSNAAKEWSGTLKELEDKRDKLKRQIRRCLNEHKKFDKQDPDTVERQRRSQQTLDTLNKAFDKVDQFLKTATPRMGQGKRPKEVKSNITDNQSGKMTTSKGTIQGYNGVATVDRKHQIIIDAQAFGEGQEHHTLKPVLENIKDRYQRLGIRKDVYAGRYKVTVTADTGFANEQNMQYLHNNKIDAYIPDNQFRSRDPKFQDQKKKYGKRHQEKPKSERRNVIPATEFKFDPTAMTCYCPAGENLSFRGERLSESGQSKAFFEGRLLQCRYCDLKHECMENPEAANHRKGAGRQVSFTINDKRKPTFTDWMKHRVDSEHGKHIYSHRMSTVEPVFANIGTNKGLKRFGLRGKAKVQGQWQLYCMIHNIEKIMRYGELAR
>NZ_CP006829.1|WP_015486316.1|2508621_2509674_-|AraC-family-transcriptional-regulator
MKLGDVSVAFVELMRLAMSRLGHDATPMLQQFQLDDLKLASPDARISIPRFMRLGHACIEVSDKPWLGLEMGRQTKAPHLGLAGLLAMSAPNVRISCQALATYELLSSFNARGRSQFKLEQGCGVASFYSVSPYNAYNLFVVDSVLCGWYHFLQWVTGRTDLVKRIEFEFSAPSYVDEYQGYFQCPVHFEATRNAVVLHEWALEIPSLHACASTYEALRRSAERELEHVRLGLSYRETVARAIGPLLDGNTPTLEQVAHRLNTAPWTLRRRLSAEGHSFQEVLNTTRRDLAVSYVRDTTLTLGEIAFLLGFGSATAFQRAFKRWTGEAPGRFREEKRRSYISTASSTSSS
>NZ_CP006829.1|WP_025265932.1|2509689_2510547_-|hypothetical-protein
MKSSLGLEAKLPVFDLLKEAIVLLWAKRNIVIPMFLPVIFVLATVDFISEVYFSPVVTDDAQVVEVDPMVEAGQSMKQLGMSLIAMLFSILMATAAHRFTLLPRDQWYTNGLHGWGKNEWRYLGRAVVIGFIAGIAALVPFFIGAATGSQEGMAIGGTIGGLIAMYLFGRLSITLPEVAIGKQGDLKRAWALSEGNGTRMVIVVLLIPIAMIIPAAILYWLESHLATYFALLVVYVGSLISVTILSLSYQFLIDFYEPESLAPEVLSEELEQPAEKEGESGRFDA
>NZ_CP006829.1|WP_025265933.1|2510650_2513122_-|RND-family-transporter
MSHYSTVPEHYILSPESEPWLERFIFNNRGIVMLLLAIITMVFAYGLSKVTLDASIEKYIPLNHSYIQNYLVHKDEMKSGVANVKIAVEVTNGDVFTAEYMEKLSKISDEIFFIKGVDRSGMQSLWTPNVRWMEVTEEGFQGGPVIPSTYDGSKVSLEVVRQNVLKSGQVGRLVSNDFRSSIIDVPLIEYDPETGEKLSYGQFSHDLEEKIRSQFSDDQYKIYITGMPKKLGDLLDGAKSIGGFFLMAMIMTAILLYLYSRCPKGTVVPIVASLIAVVWQLGSLALAGFTVDLYSVLVPFLVFAIGISHGVQIINGIAIESGKGASPVQAARQAFRGLYVPGMLALLSDAIGFLTLLFIDIGVIQELAIAASVGVAMIIVTNLVLLPIVMSYIGISRSGVEHARKSDANPAAIWRGLSMFANRKVAPIPIVIAIVMAVSGYYYSQGLKIGDLDKGAPELRADSRYNLDNAFMVSNYSTSADVFVVMVETAREHCNSFKVMDAVDRFMWYMDNVEGVQSTTSLVTVSKLVTKAMNEGNLNWSALSRNQTILNTSIQRAPAGLLNPDCSMAPVIVYLNDHKAETLETAVAAVEKFKEQFDDHVDEKYFGYGMAEMDEAIANGEIDSAPVRFQLASGNAGIEAATNQVIADAQNTMLIFVYVVVFVLCFMTFRSFTAVACILIPLALTSILSQALMTYLDIGVKVATLPVIALGVGIGVDYGIYIYNRLEVMIVAGKTMQEAFFETLRSTGKAVSFTGITLAIGVATWIASPIKFQADMGILLTFMFLWNMLGSLILLPALASFILRPERMKARHKARHGDTPPAG
>NZ_CP006829.1|WP_025265934.1|2513137_2514355_-|hypothetical-protein
MFFNLVKPKGCANGDARLNGLSRVIALLTMVLAADLTQAEWKDPLDSPALQTMRAHESLLLDVTRAGNRIVSVGSYGHIVFSDDNGMSWRQSDVPVSVTLTAVHFSGDRYGWAVGHDGVILHSSDAGRSWEKQFDGFAANDAIVRAAKANLAKAEDALVAASDSGNDLRIENAEMAEEAASFAVQDAEYDQNTGSTKPFLDVWFYDANRGFAVGAYGMFFQTLDGGKNWEDVSSRLPNPDRLHLNAITNVGPTSLAIVGEMGLLLRSDDLGQTWVTQDSPYDGSLFGMVDSGDLQLLFGLRGHVFRSKDDGITWVELTTGSEQTLLGGVVGNGEALLVGNAGSVVVFNEKLMAPRSIILGGRKASSSVVETNDGHFIIVGEAGVKILDASGELMDLNISMATGEE
>NZ_CP006829.1|WP_025265935.1|2514591_2515974_-|DUF1329-domain-containing-protein
MNKKKWIAAGALALMFSTSSVFAAVSVQQAERLKEDLTPLGGERAGNGKDIPPWRGGLSLPPLGYTKAGQHHIDPFPGDKPLFTINAKNASQYRAYLSDGQMAMFDVYPDTFKIPVYKTRRTAAAPEWVYENTYKNAVRSELANNGSSLLYAYGGIPFPVIDLDDKEAGLKAIWNHITRWRGTYLQLRASEVAVQVDGNFSPTTVQQEVEFNYYRQDRTIEDLNNILFYYLSVTKAPARLAGGAVLVHESLNQADEPRQAWGYNAGQRRVRRAPNLAYDTPIAAADGLRYADDTDMFNGSPDRFDWKLLGKKELFIPYNNYRLSSNELSYNDILRPGHINPEYTRYEKHRVWVLEATQKAGVRHVYSKRRFYIDEDTWGIVLADQYDNQGDLWRVSTAYMKTYYELPVTWTTLDVFHDLKARRYHVQGLSNEEMGEIDYSSPPPGERYFTPAELRRRGRR
>NZ_CP006829.1|WP_025265936.1|2516070_2518698_-|aminopeptidase-N
MRDAQPKAIQLSDYRAPNYQVETTHLRFELFNDYTIVHSRLDLVRHQADATSLHLDGQELELISIELDGQPLTAESYVLGEESMEIHGLGERHTLAVVTRIYPAKNTALEGLYRSGGMYCTQCEAEGFRRITYYPDRPDVMSVFTTEIIADAEQFPVLLSNGNPVSETVSDGKRHAVWLDPHKKPAYLFALVAGDLKVKEDRFTTMSGRDVVLKIFVEPQNIDKTDYAIDALQRSMRWDEEVYGREYDLDIFMIVAVDDFNMGAMENKGLNVFNSSCVLANPATATDAAYQRIESIVAHEYFHNWSGNRVTCRDWFQLSLKEGFTVFRDAGFSADMNSATVKRVEDAKIMRTVQFAEDGGPMAHPVQPDAYIEISNFYTVTIYEKGCEVVGMLHKILGAEKFRKGSDLYFARHDGQAVTINEFVSAMQDASGIDLTLFKRWYKQAGTPIVSATTKYDAEAKTLSLTLRQHTPDTPKQTNKLPVWIPVQLGLLDANGNDMAIQVEPAAAWTPESQVLHFKEAEQTFVFSGVTTEPVVSLFRDFSAPVKVQFDQTPTDLLFLLKHDSDGFNRWDAGQRLMLHWIEQAAATSEFSLAPTEREALASLLADTELDAAMVAYLLTLPSEAYISEFSDVVDPLRIHTSREAVCQAIAVDLSAEFKDCYLRLCSSDEYAPIPAQMTARALKNLALSYWARVTDAGLEQAQQQFASADNMTDQMAALIVMVNSGNDAVAAPALTSFYQQWQTDPLVVNQWLSAQAGSSAMGTVEHVKYLLAHPAFDWRNPNKVRSVISIFANQSLVNFHREDGAGYALLADAVIRLNSSNPQIASRLLTPLTKWQRLVPTLSQLMKAELQRIMHQGNLSKDVYEVVSKSLGTS
>NZ_CP006829.1|WP_025265937.1|2518717_2519539_-|DUF2797-domain-containing-protein
MEITGHLDKMRVQPGEPLTYQMVLDEHLVDLNQYLGKAITITWTGAIKCCHCGRSTNKSFNQGYCYPCFTKLAQCDSCMMSPEKCHFHMGTCREPQWAEKICFNDHIVYLANSSGIKVGITRMKNMPSRWLDQGASQALPIARVANRRLSGLIEDTLRKQVADKTSWQAMLKTAAPAVDLEATRDALREQFSAELAAIELDAGPGSVSWLGSETVRQFNYPVLQYPTKVVSHNLDKTPVVSGVLLGIKGQYLMLDTGVINLRKYTSYAVTFSA
>NZ_CP006829.1|WP_025265938.1|2519564_2519810_-|DUF1315-family-protein
MTLEKLIKALTPEVYENLKNAVATGKWPDGRLLVEGQRELCMEAIMHYEVTHNVPEELRVGYMESQCKSSKDDDTQTLTLQ
>NZ_CP006829.1|WP_015486308.1|2519799_2520642_-|rhomboid-family-intramembrane-serine-protease
MEPLLILKAPLGLDLSPVTQRLWAEKIVHRVIEIEGEQCLFIADPRQFPLVKGFIDDWHNGVRVEEPKESVSVGIFAGVMSALQTPVTLALVILLPLVYLAMQFSPFWHEWVSAGQTLWPEQRYALASYVDMGLWSLWRPTLLHFSLLHLLNNTFWCWVLGRALERRGEWIALIALIAVCGLAGNILQWWYQGPAFGGISGVVYGLVGWVGLRQRRYQIAYGIPPALMTVMVVIMAVTIAAETIEPGLTGIANGGHLGGLLAGLMLGWLWPVKKRGKHDA
>NZ_CP006829.1|WP_025265939.1|2520641_2521598_-|serine/threonine-protein-phosphatase
MHQGYDLIGDIHGCGHTLIELLEQMGYTKRNGAYQHPKRKVVFVGDIVDRGPNIRLACHVVRDMVDNGHAHIVMGNHEYNVVTYCTEAPPGMRQPFLREHTKRNDFMVEQTLEQFANYPQEFNEFLDWFIDLPLFLEFDHFRVVHACWDQAMIDEYIARYGGNQLTRDMLPESINTDSFIYRFLDRMLRGTSLKLPDGRTMTAKDGMKRQFFRTKFWADQPERYNEVVFQPDPIPEDLQHALLSEDEKKQLLYYGPEEKPLFIGHYWMAGLPAPIVPNIACIDYSAVKYGRLVAYRMDTEHALQKSKFTWVRVEKSER

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP006829_1	1.1\|419022\|52\|NZ_CP006829\|CRISPRCasFinder	419022-419073	52	NZ_CP006829.1	424965-425016	2	0.962

1. spacer 1.1|419022|52|NZ_CP006829|CRISPRCasFinder matches to position: 424965-425016, mismatch: 2, identity: 0.962

cctagttggctacttctctagtagtaccattaatagtagtttcgctactggt	CRISPR spacer
cctagttggctactcatctagtagtaccattaatagtagtttcgctactggt	Protospacer
**************. ************************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

333653 : 398187

Diadromus_pulchellus_ascovirus(14.29%)

plate,transposase,tRNA

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_025264592.1\|333653_335339_+\|tRNA	arginine--tRNA ligase	NA	NA	NA	NA
WP_015485521.1\|335400_335937_+	Sporulation related protein	NA	NA	NA	NA
WP_025264593.1\|336012_338001_+	RecQ family ATP-dependent DNA helicase	F2NZ48	Diadromus_pulchellus_ascovirus	1.4e-56	38.6
WP_025264594.1\|338009_338876_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_025264595.1\|339505_341665_+	hypothetical protein	NA	NA	NA	NA
WP_025264467.1\|341758_343102_+\|transposase	IS1182 family transposase	NA	NA	NA	NA
WP_015485533.1\|344067_344334_-	oxidative damage protection protein	NA	NA	NA	NA
WP_025264596.1\|344353_345403_-	A/G-specific adenine glycosylase	NA	NA	NA	NA
WP_025264597.1\|345466_347878_-	EAL domain-containing protein	G3MA91	Bacillus_virus	1.8e-29	43.4
WP_081758244.1\|348285_348942_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_015485537.1\|349029_349449_-	acetyl-CoA sensor PanZ family protein	NA	NA	NA	NA
WP_015485538.1\|349585_350176_+	imidazoleglycerol-phosphate dehydratase HisB	NA	NA	NA	NA
WP_015485539.1\|350185_350830_+	imidazole glycerol phosphate synthase subunit HisH	NA	NA	NA	NA
WP_015485540.1\|350878_351619_+	1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase	NA	NA	NA	NA
WP_015485541.1\|351622_352387_+	imidazole glycerol phosphate synthase subunit HisF	NA	NA	NA	NA
WP_081758245.1\|352675_354283_+	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	2.8e-18	39.9
WP_025264601.1\|354532_356371_-	dihydroxy-acid dehydratase	NA	NA	NA	NA
WP_015485544.1\|356553_356961_+	DUF393 domain-containing protein	NA	NA	NA	NA
WP_015485545.1\|356975_358358_+	ribonuclease J	NA	NA	NA	NA
WP_025264602.1\|358388_358844_-	hypothetical protein	NA	NA	NA	NA
WP_015485547.1\|358847_359789_-	paraslipin	V5L2Z3	Hirudovirus	1.2e-10	27.2
WP_025264603.1\|359998_362605_-	protein kinase	NA	NA	NA	NA
WP_025264604.1\|362881_364495_+	type VI secretion system-associated FHA domain protein TagH	NA	NA	NA	NA
WP_144055316.1\|364533_365070_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_025264605.1\|365161_366496_+\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_015485552.1\|366500_367382_+	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_025264606.1\|367462_370960_+	type VI secretion system membrane subunit TssM	NA	NA	NA	NA
WP_015485554.1\|370970_371648_+	type VI secretion system-associated protein TagF	NA	NA	NA	NA
WP_025264607.1\|371785_373039_+	type VI secretion system protein TssA	NA	NA	NA	NA
WP_015485556.1\|373098_373617_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_015485557.1\|373616_375101_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_025264608.1\|375115_376687_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_015485559.1\|376688_377168_+\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_025264609.1\|377168_379001_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_015485561.1\|378964_380104_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_051482504.1\|380214_382827_+	type VI secretion system ATPase TssH	H6X3M6	Enterobacteria_phage	4.4e-82	32.9
WP_145926205.1\|382961_384590_+	hypothetical protein	NA	NA	NA	NA
WP_155990809.1\|384641_385403_-	hypothetical protein	NA	NA	NA	NA
WP_155990810.1\|385402_385573_-	hypothetical protein	NA	NA	NA	NA
WP_015485607.1\|387465_387822_-	IS66 family insertion sequence element accessory protein TnpB	S5VXZ8	Leptospira_phage	8.0e-19	40.9
WP_015485608.1\|387808_388108_-	hypothetical protein	NA	NA	NA	NA
WP_025264614.1\|388119_388554_-	hypothetical protein	NA	NA	NA	NA
WP_025264615.1\|388605_389655_-	hypothetical protein	NA	NA	NA	NA
WP_025264616.1\|389864_390923_-	hypothetical protein	NA	NA	NA	NA
WP_025264617.1\|391132_392191_-	hypothetical protein	NA	NA	NA	NA
WP_025264618.1\|392243_393557_-	hypothetical protein	NA	NA	NA	NA
WP_025264619.1\|393627_393921_-	type VI secretion protein	NA	NA	NA	NA
WP_025264620.1\|393923_394508_-	hypothetical protein	NA	NA	NA	NA
WP_025264621.1\|394519_396406_-	type VI secretion system tip protein VgrG	A0A077K8Q4	Ralstonia_phage	3.2e-21	23.9
WP_015485571.1\|396557_397046_-	type VI secretion system tube protein Hcp	NA	NA	NA	NA
WP_025264622.1\|397458_398187_-\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_2

1441878 : 1451565

Tupanvirus(33.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_025265258.1\|1441878_1443810_+\|tRNA	threonine--tRNA ligase	A0A2K9L297	Tupanvirus	1.5e-127	37.6
WP_025265259.1\|1443813_1444353_+	translation initiation factor IF-3	A0A2L0UZ54	Agrobacterium_phage	2.0e-13	35.7
WP_015487309.1\|1444521_1444716_+	50S ribosomal protein L35	NA	NA	NA	NA
WP_015487308.1\|1444739_1445093_+	50S ribosomal protein L20	NA	NA	NA	NA
WP_015487307.1\|1445215_1446220_+\|tRNA	phenylalanine--tRNA ligase subunit alpha	A0A2K9L3A8	Tupanvirus	1.7e-29	34.0
WP_025265260.1\|1446267_1448643_+\|tRNA	phenylalanine--tRNA ligase subunit beta	A0A1L3IZU3	BeAn_58058_virus	2.1e-06	27.3
WP_015487305.1\|1448644_1448950_+	integration host factor subunit alpha	A0A0H3UZA0	Geobacillus_virus	9.6e-13	42.2
WP_015487304.1\|1448927_1449287_+	MerR family transcriptional regulator	NA	NA	NA	NA
WP_025265261.1\|1450038_1450263_+	hypothetical protein	NA	NA	NA	NA
WP_025265262.1\|1450335_1450911_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_015485608.1\|1450922_1451222_+	hypothetical protein	NA	NA	NA	NA
WP_015485607.1\|1451208_1451565_+	IS66 family insertion sequence element accessory protein TnpB	S5VXZ8	Leptospira_phage	8.0e-19	40.9

DBSCAN-SWA_3

1841885 : 1850580

uncultured_Caudovirales_phage(66.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_025265504.1\|1841885_1842260_+	fluoride efflux transporter CrcB	A0A2H4J148	uncultured_Caudovirales_phage	5.1e-08	37.6
WP_025265505.1\|1842279_1843569_+\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	3.7e-90	50.8
WP_025265506.1\|1843611_1844982_+	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA
WP_025265507.1\|1845080_1846700_+	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	5.4e-30	43.2
WP_081758298.1\|1846765_1847842_-	glycosyl transferase family protein	A0A2H4JBY5	uncultured_Caudovirales_phage	2.0e-52	37.8
WP_025265509.1\|1847727_1848039_-	TusE/DsrC/DsvC family sulfur relay protein	A0A2H4J8B6	uncultured_Caudovirales_phage	1.0e-25	52.5
WP_025265510.1\|1848035_1848314_-	hypothetical protein	NA	NA	NA	NA
WP_025265511.1\|1848313_1848661_-	hypothetical protein	NA	NA	NA	NA
WP_025265512.1\|1848677_1849067_-	sulfurtransferase complex subunit TusD	NA	NA	NA	NA
WP_025265513.1\|1849647_1850580_-	histone deacetylase family protein	A0A2K9L0I3	Tupanvirus	6.5e-28	36.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP006829

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection