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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP007124 Lactobacillus paracasei N1115 plasmid unnamed, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP007122 Lactobacillus paracasei N1115 chromosome, complete genome 2 crisprs WYL,DEDDh,csa3,DinG,cas3 0 0 12 0
NZ_CP007123 Lactobacillus paracasei N1115 plasmid unnamed, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP007125 Lactobacillus paracasei N1115 plasmid unnamed, complete sequence 1 crisprs NA 0 0 1 0
NZ_CP007126 Lactobacillus paracasei N1115 plasmid unnamed, complete sequence 0 crisprs NA 0 0 0 0

Results visualization

1. NZ_CP007122
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP007122_1 420472-420580 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP007122_2 500313-500420 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 18853 : 43219 19 Clostridium_phage(50.0%) transposase NA
DBSCAN-SWA_2 189402 : 249831 59 unidentified_phage(20.0%) transposase,holin,protease NA
DBSCAN-SWA_3 331131 : 420346 73 Lactobacillus_phage(32.0%) holin,integrase,transposase,protease,capsid attL 327143:327159|attR 344316:344332
DBSCAN-SWA_4 505922 : 587021 79 Bacillus_phage(18.75%) portal,integrase,capsid,transposase,bacteriocin,tail,terminase,head attL 500383:500399|attR 553530:553546
DBSCAN-SWA_5 645326 : 715396 53 Staphylococcus_phage(18.18%) transposase,protease NA
DBSCAN-SWA_6 775905 : 873667 106 Lactobacillus_phage(77.78%) holin,portal,integrase,transposase,tail,head,terminase,protease,capsid attL 775817:775876|attR 866902:866995
DBSCAN-SWA_7 1827663 : 1837006 8 Streptococcus_phage(33.33%) NA NA
DBSCAN-SWA_8 1884983 : 1941006 69 Lactobacillus_phage(91.49%) holin,portal,integrase,tail,head,terminase,tRNA,protease,capsid attL 1876948:1876965|attR 1948574:1948591
DBSCAN-SWA_9 2132457 : 2210776 94 Lactobacillus_phage(61.22%) holin,portal,integrase,tail,terminase,tRNA,protease,capsid attL 2173175:2173190|attR 2216453:2216468
DBSCAN-SWA_10 2246911 : 2361307 108 Bacillus_phage(17.39%) transposase,bacteriocin,tRNA,protease NA
DBSCAN-SWA_11 2539274 : 2604670 56 Streptococcus_phage(22.22%) transposase,holin,tRNA,protease NA
DBSCAN-SWA_12 2744399 : 2923879 156 unidentified_phage(17.95%) holin,transposase,bacteriocin,tRNA,protease NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_CP007125
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP007125_1 12678-12821 Orphan NA
2 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 5811 : 11735 8 Lactobacillus_phage(33.33%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage