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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP004369 Burkholderia pseudomallei MSHR520 chromosome 2, complete sequence 2 crisprs cas3,csa3,DinG 0 0 5 0
NZ_CP004368 Burkholderia pseudomallei MSHR520 chromosome 1, complete sequence 2 crisprs cas3,DEDDh,csa3,DinG,WYL 0 0 9 0

Results visualization

1. NZ_CP004369
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP004369_1 1716418-1716503 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP004369_2 3316197-3316361 Orphan NA
2 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 963004 : 1044071 45 Leptospira_phage(22.22%) transposase,protease,tRNA NA
DBSCAN-SWA_2 1416602 : 1487909 45 Planktothrix_phage(15.38%) transposase,plate,integrase attL 1411230:1411249|attR 1491508:1491527
DBSCAN-SWA_3 2385183 : 2394509 11 Burkholderia_virus(57.14%) transposase,integrase attL 2380113:2380129|attR 2406316:2406332
DBSCAN-SWA_4 2547193 : 2618698 53 Vibrio_phage(25.0%) plate,holin NA
DBSCAN-SWA_5 3354302 : 3361063 8 Burkholderia_virus(50.0%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_CP004368
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP004368_1 252554-252633 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP004368_2 3027127-3027268 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 181900 : 247087 58 Streptococcus_phage(12.5%) portal,transposase,protease,tRNA NA
DBSCAN-SWA_2 461631 : 472850 11 Shigella_phage(20.0%) integrase attL 459044:459061|attR 475630:475647
DBSCAN-SWA_3 717106 : 743668 30 Burkholderia_phage(44.44%) integrase,protease,plate,tail attL 717679:717725|attR 733156:733202
DBSCAN-SWA_4 1094946 : 1104191 7 Hokovirus(16.67%) NA NA
DBSCAN-SWA_5 1442944 : 1451759 8 Bacillus_phage(16.67%) NA NA
DBSCAN-SWA_6 1526920 : 1606158 82 Burkholderia_virus(30.3%) portal,protease,terminase,holin,integrase,tail,head attL 1533466:1533483|attR 1556256:1556273
DBSCAN-SWA_7 1756736 : 1849117 102 uncultured_Caudovirales_phage(22.73%) plate,portal,protease,capsid,terminase,tail,integrase,tRNA,head attL 1765508:1765526|attR 1823689:1823707
DBSCAN-SWA_8 2042275 : 2050468 12 Burkholderia_virus(50.0%) NA NA
DBSCAN-SWA_9 3475495 : 3486439 10 Agrobacterium_phage(16.67%) protease NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage