CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP007446	Snodgrassella alvi wkB2 chromosome, complete genome	2 crisprs	cas3,DinG,DEDDh,RT	0	3	7	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP007446_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP007446_1

255823-256007

Orphan

Consensus_repeat	Method
CGCCATTAAGAATATCATTACCG	CRISPRCasFinder

3 spacers

The CRISPR arrays of NZ_CP007446_1

>merge|NZ_CP007446|1|255823-256007|CRISPRCasFinder
CGCCATTAAGAATATCATTACCGGCACCACCATTTAATGTATCACAACCGTAGTCGCCATTAAGAATATCATCACCGTTTTCTCCGTTGAGTTCGTCATTGCCATCGCCGCCATTCAGGATATCATCACCATTTCTACCCCACAGAACATCATTACCATAACCCCCGTTCATAATATCCTTACCT

>NZ_CP007446|1|1|255823-256007|CRISPRCasFinder
CGCCATTAAGAATATCATTACCG	GCACCACCATTTAATGTATCACAACCGTAGT
CGCCATTAAGAATATCATCACCG	TTTTCTCCGTTGAGTTCGTCATTGCCATCGC
CGCCATTCAGGATATCATCACCA	TTTCTACCCCACAGAACATCATTACCATAAC
CCCCGTTCATAATATCCTTACCT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP007446.1\|WP_025329848.1\|244251_245007_+\|amino-acid-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224051
NZ_CP007446.1\|WP_025329845.1\|241747_242518_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224045
NZ_CP007446.1\|WP_025329849.1\|245106_245655_-\|nucleotide-exchange-factor-GrpE	unknown	unknown	gnl\|CDD\|237621
NZ_CP007446.1\|WP_025329853.1\|250725_251808_+\|sulfate-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213263
NZ_CP007446.1\|WP_025329860.1\|261175_261928_-\|cell-division-protein-ZapD	unknown	unknown	gnl\|CDD\|377767
NZ_CP007446.1\|WP_025329851.1\|248986_249823_+\|sulfate-ABC-transporter-permease-subunit-CysT	unknown	unknown	gnl\|CDD\|131194
NZ_CP007446.1\|WP_025329856.1\|258950_259199_-\|BolA-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|227340
NZ_CP007446.1\|WP_025329862.1\|262544_263396_-\|prepilin-peptidase	unknown	unknown	gnl\|CDD\|224900
NZ_CP007446.1\|WP_025329850.1\|245919_248622_-\|phosphoenolpyruvate-carboxylase	unknown	unknown	gnl\|CDD\|234570
NZ_CP007446.1\|WP_025329852.1\|249822_250695_+\|sulfate-ABC-transporter-permease-subunit-CysW	unknown	unknown	gnl\|CDD\|226665
NZ_CP007446.1\|WP_038648602.1\|259253_260015_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|237896
NZ_CP007446.1\|WP_025329859.1\|260978_261176_-\|DNA-gyrase-inhibitor-YacG	unknown	unknown	gnl\|CDD\|367713
NZ_CP007446.1\|WP_025329858.1\|260011_260932_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224054
NZ_CP007446.1\|WP_025329846.1\|242723_243524_+\|amino-acid-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270217
NZ_CP007446.1\|WP_025329864.1\|264683_266363_-\|type-IV-A-pilus-assembly-ATPase-PilB	unknown	unknown	gnl\|CDD\|274186
NZ_CP007446.1\|WP_025329844.1\|240736_241738_+\|iron-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|376439
NZ_CP007446.1\|WP_025329861.1\|261933_262548_-\|dephospho-CoA-kinase	unknown	unknown	gnl\|CDD\|234620
NZ_CP007446.1\|WP_025329863.1\|263402_264635_-\|type-II-secretion-system-F-family-protein	unknown	unknown	gnl\|CDD\|224376
NZ_CP007446.1\|WP_025329855.1\|257651_258911_-\|UDP-N-acetylglucosamine-1-carboxyvinyltransferase	unknown	unknown	gnl\|CDD\|236486
NZ_CP007446.1\|WP_025329847.1\|243602_244247_+\|amino-acid-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223836

Protein	Function_ID	Function_description	E-value
NZ_CP007446.1\|WP_025329848.1\|244251_245007_+\|amino-acid-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224051	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism].	7.4498e-145
NZ_CP007446.1\|WP_025329845.1\|241747_242518_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224045	COG1120, FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism].	1.52959e-71
NZ_CP007446.1\|WP_025329849.1\|245106_245655_-\|nucleotide-exchange-factor-GrpE	gnl\|CDD\|237621	PRK14139, PRK14139, heat shock protein GrpE; Provisional.	4.548e-70
NZ_CP007446.1\|WP_025329853.1\|250725_251808_+\|sulfate-ABC-transporter-ATP-binding-protein	gnl\|CDD\|213263	cd03296, ABC_CysA_sulfate_importer, ATP-binding cassette domain of the sulfate transporter. Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.	8.54501e-144
NZ_CP007446.1\|WP_025329860.1\|261175_261928_-\|cell-division-protein-ZapD	gnl\|CDD\|377767	pfam07072, ZapD, Cell division protein. Cell division protein ZapD enhances FtsZ-ring assembly. It directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity.	1.78611e-79
NZ_CP007446.1\|WP_025329851.1\|248986_249823_+\|sulfate-ABC-transporter-permease-subunit-CysT	gnl\|CDD\|131194	TIGR02139, permease_CysT, sulfate ABC transporter, permease protein CysT. This model represents CysT, one of two homologous, tandem permeases in the sulfate ABC transporter system; the other is CysW (TIGR02140). The sulfate transporter has been described in E. coli as transporting sulfate, thiosulfate, selenate, and selenite. Sulfate transporters may also transport molybdate ion if a specific molybdate transporter is not present. [Transport and binding proteins, Anions].	1.51413e-114
NZ_CP007446.1\|WP_025329856.1\|258950_259199_-\|BolA-family-transcriptional-regulator	gnl\|CDD\|227340	COG5007, COG5007, Predicted transcriptional regulator, BolA superfamily [Transcription].	3.74441e-29
NZ_CP007446.1\|WP_025329862.1\|262544_263396_-\|prepilin-peptidase	gnl\|CDD\|224900	COG1989, PulO, Type II secretory pathway, prepilin signal peptidase PulO and related peptidases [Cell motility and secretion / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion].	1.3854e-48
NZ_CP007446.1\|WP_025329850.1\|245919_248622_-\|phosphoenolpyruvate-carboxylase	gnl\|CDD\|234570	PRK00009, PRK00009, phosphoenolpyruvate carboxylase; Reviewed.	0
NZ_CP007446.1\|WP_025329852.1\|249822_250695_+\|sulfate-ABC-transporter-permease-subunit-CysW	gnl\|CDD\|226665	COG4208, CysW, ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism].	3.78661e-145
NZ_CP007446.1\|WP_038648602.1\|259253_260015_-\|ABC-transporter-permease	gnl\|CDD\|237896	PRK15066, PRK15066, inner membrane transport permease; Provisional.	1.03612e-63
NZ_CP007446.1\|WP_025329859.1\|260978_261176_-\|DNA-gyrase-inhibitor-YacG	gnl\|CDD\|367713	pfam03884, YacG, DNA gyrase inhibitor YacG. YacG inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. It acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase. YacG has been shown to bind zinc and contains the structural motifs typical of zinc-binding proteins. The conserved four cysteine motif in this protein (-C-X(2)-C-X(15)-C-X(3)-C-) is not found in other zinc-binding proteins with known structures.	2.46231e-23
NZ_CP007446.1\|WP_025329858.1\|260011_260932_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	3.03014e-93
NZ_CP007446.1\|WP_025329846.1\|242723_243524_+\|amino-acid-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270217	cd00996, PBP2_AatB_like, Polar amino acids-binding domain of ATP-binding cassette transporter-like systems that belong to the type 2 periplasmic binding fold protein superfamily. This subfamily includes periplasmic binding domain of ATP-binding cassette transporter-like systems that serve as initial receptors in the ABC transport of amino acids and their derivatives in eubacteria. After binding their ligand with high affinity, they interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically-located ATPase. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. The Abp proteins belong to the PBPI superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	3.82624e-126
NZ_CP007446.1\|WP_025329864.1\|264683_266363_-\|type-IV-A-pilus-assembly-ATPase-PilB	gnl\|CDD\|274186	TIGR02538, Type_IV_pilus_assembly_protein_PilF, type IV-A pilus assembly ATPase PilB. This model describes a protein of type IV pilus biogenesis designated PilB in Pseudomonas aeruginosa but PilF in Neisseria gonorrhoeae; the more common usage, reflected here, is PilB. This protein is an ATPase involved in protein export for pilin assembly and is closely related to GspE (TIGR02533) of type II secretion, also called the main terminal branch of the general secretion pathway. Note that type IV pilus systems are often divided into type IV-A and IV-B, with the latter group including bundle-forming pilus, mannose-sensitive hemagglutinin, etc. Members of this family are found in type IV-A systems. [Cell envelope, Surface structures, Protein fate, Protein and peptide secretion and trafficking].	0
NZ_CP007446.1\|WP_025329844.1\|240736_241738_+\|iron-ABC-transporter-permease	gnl\|CDD\|376439	pfam01032, FecCD, FecCD transport family. This is a sub-family of bacterial binding protein-dependent transport systems family. This Pfam entry contains the inner components of this multicomponent transport system.	1.60961e-69
NZ_CP007446.1\|WP_025329861.1\|261933_262548_-\|dephospho-CoA-kinase	gnl\|CDD\|234620	PRK00081, coaE, dephospho-CoA kinase; Reviewed.	2.82495e-73
NZ_CP007446.1\|WP_025329863.1\|263402_264635_-\|type-II-secretion-system-F-family-protein	gnl\|CDD\|224376	COG1459, PulF, Type II secretory pathway, component PulF [Cell motility and secretion / Intracellular trafficking and secretion].	2.26146e-151
NZ_CP007446.1\|WP_025329855.1\|257651_258911_-\|UDP-N-acetylglucosamine-1-carboxyvinyltransferase	gnl\|CDD\|236486	PRK09369, PRK09369, UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Validated.	0
NZ_CP007446.1\|WP_025329847.1\|243602_244247_+\|amino-acid-ABC-transporter-permease	gnl\|CDD\|223836	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism].	1.29412e-76

>NZ_CP007446.1|WP_025329853.1|250725_251808_+|sulfate-ABC-transporter-ATP-binding-protein
MSIRIKQLNKYYGDYQALQNINLQVPTGSLTALLGPSGCGKTTLLRIIAGLERADSGELFFADDEVSNLHVRERRVGFMFQHYALFRHMTVFDNVAFGLQVLPKRIRPNKAEIADRVHELLQLVQLDWLAKVYPQQLSGGQRQRIALARALATRPKLLLLDEPFGALDAKVRKELRQWLLEIHHQLGITSVLVTHDQEEALEMAEQIVVMNQGKVEQSGAASSLYDNPENVFVTEFLGEVNVFEDACIEHGQLCLGHYHEPITTGEKARQNVAVYIRPQEVQVLTHIQDNIIASACVEKIHAIGAQIRLWLRREDNNQRIQVWLSPAEFRTLSLQPAQTVWFRPQRLTMFRLPEMVDYVI
>NZ_CP007446.1|WP_025329852.1|249822_250695_+|sulfate-ABC-transporter-permease-subunit-CysW
MSTVKTNELLTEPRWLRYLLISITLLCLGLLLLLPLLSVFSFALAKGWQLYLAALTDEEALSAIRLSLLITVIVVPVNVILGVAMAWLLTHFSFRGKQLWTTLLDLPFAVSPVVAGLMFVLLFGSNSWFGGWMETHGIQIIFAVPGMVLATLFVTFPFVARELIPLMQAQGSSEEQAALILGASGWQMFWRVTLPNLKWALVYGIILTNARAMGEFGAVSMVSGHIRGETNTMPLLVEMMYNEYNMVGAFAVSSLLALLALCTLVLQKYLDWRQTRLFKDARREQIAVSD
>NZ_CP007446.1|WP_025329851.1|248986_249823_+|sulfate-ABC-transporter-permease-subunit-CysT
MLFLKQPSVLPGFSLSLGISVLSLSVLVLLPFTMLVWTVTDLGWHGFIQVISEPRTLAAVWLTLKMSLLAMLASVLLGTLVAWVLVRYHFWGKDLVNALVDLPFALPTAVTGVALATLYAPTGWIGALLTRFGLQIAFTPAGIWLALLLVSLPFVVRAVQPVLAELSGEYEEAAAILGASRLTIVFRVLLPEVLPALVMGAGMAFARATGEYGSVIFIAGNVPFKSEILPLIIVSKFELFDLPAAAAVALFMLIISFTILFMLNLWQWRLSRRMQGRY
>NZ_CP007446.1|WP_025329850.1|245919_248622_-|phosphoenolpyruvate-carboxylase
MPTSLLDERKDAPLSADIKFLTEALFNVLQNETTATVQTVLRQLLSGNQPQTIIQQVVPTLDLQQQQDLIRACSLFAQVLNIAEDAHHERRRQAYENDRQHPGRTSFTHVINQIQQQQISAAQLEQILQQTSISAVLTAHPTEVQRQCILCFQRHIRTILSEYDHSDHHYNEQLKQQAETILLALWQTDETRHFKISVSDEIYNSVNYFPLSFFKAVPALYRKLQQQLTSAYPQITLPDVLSIGGWVGGDRDGNPYVNADTLQEAFIFQGDTLLKHYHQCLDELHQLLPLSSRRVQIDSSVYHMAEQSPDTATAHSEEPYRRALTYIQARLNATSRQLNIAPHNQHHGLPPYKQPAELLQELNNIASSLQQNGSALLTQGKLADLIRSVSLFGFHLMSIDLRQHAAKHAEVVAELFTHAGLETFETLSEAAKQRVLLRELSTQRPLYSPYIQYSPHTMRELAIFQTAANIKNNYGESAINQCIISNAETVSDILVVALLLKETGLLSISNEKPTSRINIVPLFETIDALHNCISIMDKLFNLPWYRAFLRSRDNLQEIMLGYSDSNKDGGYVTSQWSLYQAESRLVQLFGQHHIRLRLFHGRGGSVGRGGGPSFDAIMAQPAGSVAGQIRITEQGEVITAKYADPTNAERNLEALIAATLEATVLPMHNSEPDSELMNALSASAFTHYRQLITFPGFIDYFLQTSPIQEIASLNIGSRPASRKTLAKIQDLRAIPWVFSWTQNRLMLPAWYGFGSAVAELIEQDSTNLQRLQQQVKNSPFFQTMLSNMDQVMAKADLTIAEAYVDLASDQQAARTIYTMLSEEFERSRQALLNILQRQHYLSDNRTLARSLALRIPYLNALNWLQIHLLQQLRQQPDNSEILQLIHLTINGIAQGLRNTG
>NZ_CP007446.1|WP_025329849.1|245106_245655_-|nucleotide-exchange-factor-GrpE
MQPENNTENETQVNDNTETTEPIVAPEATVEELQERISELEGQLKDEQLRSLANEQNLRRRHQDELESAHKFAGQKFASAMLPVKDYLEMALQDQSGNFDALKMGVQMTLTELQKAFDQSNIKEIDPKAGDKLDPHRHQALQSVESEQEPNTVVSVMKKGYTLSDRVLRPAMVTVAKAADTE
>NZ_CP007446.1|WP_025329848.1|244251_245007_+|amino-acid-ABC-transporter-ATP-binding-protein
MIDARGIYKAFGNTEVLKGVDIQVARSEVVAIIGSSGSGKSTLLRCLNYLEKIDAGSIAIENDFLVQNNIHNRAHYVSEGLIKKICTRMGMVFQQFNLFPHMTVLQNIIEAPITVKKMKRDEIVPLAQELLRKVGLANKQDYYPSQLSGGQKQRVAIARALAMQPQIMLFDEPTSALDPELTGEVLKTMQQLAEDRMTMVVVTHEMGFAREVADKVLFMDKGVIVEAGEASSFFANPQHTRTQEFLSSMLK
>NZ_CP007446.1|WP_025329847.1|243602_244247_+|amino-acid-ABC-transporter-permease
MNYVLNMLPELWTGAKITLSLFAITLLLSIPLGLVLALLRLSEIRALDYIVNFYIWVMRGTPLMLQIFFIYFALPAVNILLPAYTTAVVAFVLNYAAYFAEIFRAGIQGVGKGQYEAAKTLGMSYGQTMRRIVLPQMWKKILPPLSNETITLVKDTSLVYVLALQDVMRVTYQLVQREFNLMPFFVAAAFYLIMTLILTWGFQKMEKRYARYDD
>NZ_CP007446.1|WP_025329846.1|242723_243524_+|amino-acid-ABC-transporter-substrate-binding-protein
MQNAIRNFLFGSVVAVALAACGGESASGTASSSGESTGQKVVMGLDDSFPPMGFRNEKNELVGFDIDMAREAAKRAGLNVELKPIDWSAKESELNSKRVDMLWNGLTITPQRQQQLLLSKPYMDNHQIIVVRPDSGINTKADLNGKIVAVQDGSSAVDAVEADQNTAKSFKELKKYADNVTALMDVSAKRVDALVVDEVVGRYYVSKKPNEYKVLGDNFGTEQYAVAFRKDDQALEQKIQGALDSMKADGTSAKIATKWFGKDIIK
>NZ_CP007446.1|WP_025329845.1|241747_242518_+|ABC-transporter-ATP-binding-protein
MENLFTIRNVHVQPRGRCILSVPQLDLPANQHISIIGPNGAGKSTLLRALLGLHGAGVKLFGEPVDNSLKRRQIAWVGQHGQYNLPLTVVEYVQLGCSPQGGWFKKARAPAAKLQQLLDVFDLCTLAQQRIGSLSGGEQQRANVVRALLQNAPLLLLDEPCNHLDIRHQHQLMHYLHEHHDDFSVVMVLHDLTMAANHSDFIVLMNEGQIVASGTPQDVMQSALLSEVYQWPIRRIEEDGKLFFRMNHQALHSAAA
>NZ_CP007446.1|WP_025329844.1|240736_241738_+|iron-ABC-transporter-permease
MTQVQQTAGTPDHNRVKSAFWPKLVWFIAAILFSLLLSWFCLGLGMGGWQWPQSMDEITLGIRLPRVLVALIVGAALAASGAALQALFDNPLADPSLIGTSGGAALGVIAVLAGGWGAVTVPMAAFLGALLVCVLILTVHRLLGGGTLGLLVMGFVISAFCGALVSMILFMSDDMVLRSATSWLAGSLAESGFTSPWYALVVMLLGLCVLVAVGRRLDILMLGEETAISMGVAVGSTRIWAVIGSALLTGAAVSMAGIIGFLGMMVPNVVARNRGGSRRKIILLSAWLGAIFLLLVDSVSRWLSYPVDLPVGIVISLLGGPFFLWLFLQPLRR
>NZ_CP007446.1|WP_025329855.1|257651_258911_-|UDP-N-acetylglucosamine-1-carboxyvinyltransferase
MEKLKIRANGALHGEIVISGAKNAALPLLCASLLTRDTLHLANVPMLRDVKTTQKLLQGMGARVLTDNIQEFEINCNSINNTCAPYDLVKTMRASILVLGPTLAHFGEAQVSLPGGCAIGSRPVDQHLKGLEAMGAEISIEHGYVKARAKRLQGAHIVMDMVTVTGTENLLMAATLANGTTILENAAMEPEVTDLADCLVKMGANIQGIGTPTLTITGVEKLHGCSHRVVPDRIEAGTFLCAVAMTGGKVVLKHAAPKTMQAILEKLSEAGAIIEAGDDWISIDMQQRPKAIDIRTLPYPAFPTDMQAQFMVMNSIASGNSKVVETIFENRFMHVPELNRMGARISAEGNTAIVEGVEQLSGTTVMATDLRASASLVLAGLVASGETTVERIYHLDRGYENIEQKLGGVGAIIERVSDH
>NZ_CP007446.1|WP_025329856.1|258950_259199_-|BolA-family-transcriptional-regulator
MLTPEEVKTMIANLLPCEYLEVEGDGHHFFARIVSSAFNGKNRLARHRMIKDGLAQQIASNELHALSITTAATPDEWAVKQH
>NZ_CP007446.1|WP_038648602.1|259253_260015_-|ABC-transporter-permease
MNTIGCYTLFKKEVLRFWKVGFQTLSAPILTALLYQLIFAHVMQGRPDILPGVSYNVFLIPGLAMMSMLQNAFANSSSSLIQSRITGNLIFILLPPLGTIAFFCAYVGASILRGLMVGIGVIAVTAFFGLTMPHHIGWIITFALLGCAIMGMFGLLAGIVAEKFDQLAAFQNFLIMPLTFLSGVFYSINSLPEFWRSLSHFNPVFYMIDGFRFGFFGQSDSSPWLALTVVGSFAIVLCFLVCGILKSGWKLRN
>NZ_CP007446.1|WP_025329858.1|260011_260932_-|ABC-transporter-ATP-binding-protein
MTSPALCIKQAVKTYANGFTALKGVSFSVQPGEFFGLLGPNGAGKTTLISAMAGLSRLTSGQISICGHDVQLEANTTRKLLGVVPQELVFDPFFNVREALKFQSGYFGLRNNDDWIDEIIAGLGLTDKADTNTRNLSGGMKRRVMVALALVHRPPVIVLDEPTAGVDVELRQNLWQFITRLNTDGHTIILTTHYLEEAQSLCNRIAMLKHGEIVALDSTRNLLDTETELRLALTTDQTLPDNLRHYLIKEDDNNHYLLKLADYNQLTALLQILQTQRINVINLNILENDLENVFLRLTSDHAKGTK
>NZ_CP007446.1|WP_025329859.1|260978_261176_-|DNA-gyrase-inhibitor-YacG
MTEKITTVICPICGKNVDWTPSSRFRPFCSERCKMIDLGAWASENYNLPADEDQPLSEEITPSKH
>NZ_CP007446.1|WP_025329860.1|261175_261928_-|cell-division-protein-ZapD
MIHFEHPLSERVRNFLRIAHLFKHFHEVVIRSEIWAHHCALFSLFEIMEAAARAELKLDILQELERQKSLARQRGEEGKNVLVDIQTAITNLQSVQQKFGQHLRENEWLMAIKQRMFVPGGTSPYDLPSYYYWQQKKPAERELQLRQWIQSLLPTYEAIKLLLEILRQNSLSVDCLATSGSYQHNSLGQNIHLLGINVSQNATALPEVSANKYFTHIRFLQASQQQARGQVLTTDIPFTLVMCSFDPVIK
>NZ_CP007446.1|WP_025329861.1|261933_262548_-|dephospho-CoA-kinase
MTFWIGLSGGIGSGKSAVASCFTALGIPVLNADEIAHQLTAPGGLALPEIRRQCGNNLFLTGGTLDRPKLRNWVFADSQNRILLENILHPLILQSLQQAKQQIVLNQHYGIIEIPLLAEKPEFQQLVQRILIIEAPVNICIQRVRQRSNLDESTIRAIMAQQADSNSRKAIADDIIINDGNWQELNRKVIQLHHFYQALTPAKL
>NZ_CP007446.1|WP_025329862.1|262544_263396_-|prepilin-peptidase
MLTDTLFFSVIALISGCAVGSFLNVVIYRLPIMMERSWQAEARMALQLPAEHTSHFNLCVPHSACPHCQHKIRWWQNIPLVSYILLRGRCASCSASISPRYFCVELLTGIAFAAVVWRYDVTPIAAGGLILTAALIALTFIDAETQLLPDQITLPLLWLGLLFNWYCEFVPLASAVWGAALGYLSLWSLFWLFKLLTGKDGMGYGDFKLLAALGAWMGASALPLIVFMAAIVGIIASLILRVARSQPMAFGPALAIAGWIVWMTNSQINQLIHWWLRLSGFST
>NZ_CP007446.1|WP_025329863.1|263402_264635_-|type-II-secretion-system-F-family-protein
MNKPVAVSKTKSSGTSFSFEGKNLKTEQIVRGEVVAKDEADARAKLTRRQIRVIQIAKVKKQRQKKISQADITVFTRQLSTMMKSGLPMMQAFDIAAKGHSNPAMTQLLLQIRSDVEQGTSLAESFSKHPKYFDHFYCNLVHAGEAGGVLEAILDKLSVYKEKTQGIKKKVKSALTYPAVVVVVAIALVIVMMMFVLPSFGKVYESMGVPLPGLTQFMMNISNFFVHYGIFVIIALIGGVIGLFKWYQNSDDLKKRFDYMLLKMPIFGQIVRKATIARWSRTTATLFAAGVPLVEVLDSVAGASGNIRYEEATQEIRAKVNQGISLTSAMQATELFPNMVMQMASIGEESGSLDDMLNKAAEFYEEDVDTAVAQLSSLMEPIIMVVLGGIVGIILVAMYLPLFNIGNAVG
>NZ_CP007446.1|WP_025329864.1|264683_266363_-|type-IV-A-pilus-assembly-ATPase-PilB
MSLGLIRVLYKHQIIDAEKAEKLRQELEQKRPVIPALLQSGAINADKLASFLSGVFGIPYLNLEPYNQSLVPLDLINLKIMQQYICVPLFKRGNRLFLAVSDPTSIQHYQKIATDAGCVLNLVIVRDSQLRQLLENLGQESTNLLEDMDSIGDSSAVENNAMSADDEDGENGPIAKFVFKILGDALNSGASDIHFEFYEEMARVRFRVDGQLREVVRMPLNIRGQIASRIKVMAKLDISEKRIPQDGRIQVQFRKGAKPIDFRVSTLPTLFGEKIVMRILNSDAATLNIEQLGFEPFQKELLLEAIHRPYGMVLVTGPTGSGKTVSLYTCLNILNTDSVNISTAEDPAEINLPGINQVNVNDKQGLTFAAALKSFLRQDPDIIMVGEIRDLETADIAIKAAQTGHMVFSTLHTNNAPATLSRMLNMGVAPFNIASSVNLIMAQRLVRRLCTCKAPAERPPEFALKKAGFSDEDLAKEWTFYRPVGCERCKGKGYKGRAGVYEVMPVSDEMQRIIMNNGNEVDISTQALKEGLVDLRHAGLLKVMEGITSLDEILASTND

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Crispr_ID: NZ_CP007446_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP007446_2

1650638-1650751

Orphan

Consensus_repeat	Method
AAAATAAGGGTACAGGCAGTATCTCTTTAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP007446_2

>merge|NZ_CP007446|2|1650638-1650751|CRISPRCasFinder
AAAATAAGGGTACAGGCAGTATCTCTTTAACCAACAACAATATCATCGATAACAATACCTTTGGTACCTTTGACGGTTATATCGAAAATAATGGTACAGGCAGTATCTCTTTAA

>NZ_CP007446|2|2|1650638-1650751|CRISPRCasFinder
AAAATAAGGGTACAGGCAGTATCTCTTTAA	CCAACAACAATATCATCGATAACAATACCTTTGGTACCTTTGACGGTTATATCG
AAAATAATGGTACAGGCAGTATCTCTTTAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP007446.1\|WP_025331056.1\|1653963_1655514_+\|multicopper-oxidase-CueO	unknown	unknown	gnl\|CDD\|236810
NZ_CP007446.1\|WP_025331061.1\|1660024_1660474_-\|ClpXP-protease-specificity-enhancing-factor	unknown	unknown	gnl\|CDD\|236987
NZ_CP007446.1\|WP_025331054.1\|1644775_1646731_+\|RNA-polymerase-sigma-factor-RpoD	unknown	unknown	gnl\|CDD\|235549
NZ_CP007446.1\|WP_025331065.1\|1663212_1664043_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007446.1\|WP_025331062.1\|1660498_1661104_-\|glutathione-S-transferase-N-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|236537
NZ_CP007446.1\|WP_025331060.1\|1659226_1659514_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007446.1\|WP_025331049.1\|1638996_1639200_+\|DNA-directed-RNA-polymerase-subunit-omega	unknown	unknown	gnl\|CDD\|234744
NZ_CP007446.1\|WP_099048806.1\|1635906_1636284_-\|DUF3465-domain-containing-protein	unknown	unknown	gnl\|CDD\|314772
NZ_CP007446.1\|WP_025331047.1\|1636551_1638177_-\|CTP-synthase	unknown	unknown	gnl\|CDD\|235437
NZ_CP007446.1\|WP_025331051.1\|1642018_1642231_+\|30S-ribosomal-protein-S21	unknown	unknown	gnl\|CDD\|234707
NZ_CP007446.1\|WP_025331063.1\|1661262_1662015_-\|Nif3-like-dinuclear-metal-center-hexameric-protein	unknown	unknown	gnl\|CDD\|182741
NZ_CP007446.1\|WP_025331048.1\|1638334_1638946_+\|guanylate-kinase	unknown	unknown	gnl\|CDD\|234719
NZ_CP007446.1\|WP_025331050.1\|1639215_1641744_+\|bifunctional-(p)ppGpp-synthetase/guanosine-3',5'-bis(diphosphate)-3'-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|223394
NZ_CP007446.1\|WP_025331053.1\|1642930_1644715_+\|DNA-primase	unknown	unknown	gnl\|CDD\|235551
NZ_CP007446.1\|WP_025331052.1\|1642404_1642848_+\|GatB/YqeY-domain-containing-protein	unknown	unknown	gnl\|CDD\|370480
NZ_CP007446.1\|WP_025331058.1\|1657507_1658074_-\|alkyl-hydroperoxide-reductase-subunit-C	unknown	unknown	gnl\|CDD\|211789
NZ_CP007446.1\|WP_025331059.1\|1658508_1659108_+\|DUF2238-domain-containing-protein	unknown	unknown	gnl\|CDD\|378345
NZ_CP007446.1\|WP_080690457.1\|1635258_1635837_-\|HdeD-family-acid-resistance-protein	unknown	unknown	gnl\|CDD\|225786
NZ_CP007446.1\|WP_025331064.1\|1662289_1663114_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007446.1\|WP_025331057.1\|1655780_1657349_-\|alkyl-hydroperoxide-reductase-subunit-F	unknown	unknown	gnl\|CDD\|237942

Protein	Function_ID	Function_description	E-value
NZ_CP007446.1\|WP_025331056.1\|1653963_1655514_+\|multicopper-oxidase-CueO	gnl\|CDD\|236810	PRK10965, PRK10965, multicopper oxidase; Provisional.	0
NZ_CP007446.1\|WP_025331061.1\|1660024_1660474_-\|ClpXP-protease-specificity-enhancing-factor	gnl\|CDD\|236987	PRK11798, PRK11798, ClpXP protease specificity-enhancing factor; Provisional.	1.33493e-62
NZ_CP007446.1\|WP_025331054.1\|1644775_1646731_+\|RNA-polymerase-sigma-factor-RpoD	gnl\|CDD\|235549	PRK05658, PRK05658, RNA polymerase sigma factor RpoD; Validated.	0
NZ_CP007446.1\|WP_025331062.1\|1660498_1661104_-\|glutathione-S-transferase-N-terminal-domain-containing-protein	gnl\|CDD\|236537	PRK09481, sspA, stringent starvation protein A; Provisional.	1.9488e-64
NZ_CP007446.1\|WP_025331049.1\|1638996_1639200_+\|DNA-directed-RNA-polymerase-subunit-omega	gnl\|CDD\|234744	PRK00392, rpoZ, DNA-directed RNA polymerase subunit omega; Reviewed.	1.89534e-25
NZ_CP007446.1\|WP_099048806.1\|1635906_1636284_-\|DUF3465-domain-containing-protein	gnl\|CDD\|314772	pfam11948, DUF3465, Protein of unknown function (DUF3465). This family of proteins are functionally uncharacterized. This protein is found in bacteria. Proteins in this family are typically between 131 to 151 amino acids in length. This protein has a conserved HWTH sequence motif.	4.82323e-67
NZ_CP007446.1\|WP_025331047.1\|1636551_1638177_-\|CTP-synthase	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
NZ_CP007446.1\|WP_025331051.1\|1642018_1642231_+\|30S-ribosomal-protein-S21	gnl\|CDD\|234707	PRK00270, rpsU, 30S ribosomal protein S21; Reviewed.	1.15888e-16
NZ_CP007446.1\|WP_025331063.1\|1661262_1662015_-\|Nif3-like-dinuclear-metal-center-hexameric-protein	gnl\|CDD\|182741	PRK10799, PRK10799, type 2 GTP cyclohydrolase I.	2.69459e-103
NZ_CP007446.1\|WP_025331048.1\|1638334_1638946_+\|guanylate-kinase	gnl\|CDD\|234719	PRK00300, gmk, guanylate kinase; Provisional.	3.01077e-104
NZ_CP007446.1\|WP_025331050.1\|1639215_1641744_+\|bifunctional-(p)ppGpp-synthetase/guanosine-3',5'-bis(diphosphate)-3'-pyrophosphohydrolase	gnl\|CDD\|223394	COG0317, SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases [Signal transduction mechanisms / Transcription].	0
NZ_CP007446.1\|WP_025331053.1\|1642930_1644715_+\|DNA-primase	gnl\|CDD\|235551	PRK05667, dnaG, DNA primase; Validated.	0
NZ_CP007446.1\|WP_025331052.1\|1642404_1642848_+\|GatB/YqeY-domain-containing-protein	gnl\|CDD\|370480	pfam09424, YqeY, Yqey-like protein. The function of this domain found in the YqeY protein is uncertain.	1.33091e-55
NZ_CP007446.1\|WP_025331058.1\|1657507_1658074_-\|alkyl-hydroperoxide-reductase-subunit-C	gnl\|CDD\|211789	TIGR03137, AhpC, peroxiredoxin. This peroxiredoxin (AhpC, alkylhydroperoxide reductase subunit C) is one subunit of a two-subunit complex with subunit F(TIGR03140). Usually these are found as an apparent operon. The gene has been characterized in Bacteroides fragilis, where it is important in oxidative stress defense. This gene contains two invariant cysteine residues, one near the N-terminus and one near the C-terminus, each followed immediately by a proline residue. [Cellular processes, Detoxification, Cellular processes, Adaptations to atypical conditions].	1.2285e-128
NZ_CP007446.1\|WP_025331059.1\|1658508_1659108_+\|DUF2238-domain-containing-protein	gnl\|CDD\|378345	pfam09997, DUF2238, Predicted membrane protein (DUF2238). This domain, found in various hypothetical bacterial proteins, has no known function.	2.3091e-62
NZ_CP007446.1\|WP_080690457.1\|1635258_1635837_-\|HdeD-family-acid-resistance-protein	gnl\|CDD\|225786	COG3247, HdeD, Uncharacterized conserved protein [Function unknown].	2.93752e-26
NZ_CP007446.1\|WP_025331057.1\|1655780_1657349_-\|alkyl-hydroperoxide-reductase-subunit-F	gnl\|CDD\|237942	PRK15317, PRK15317, alkyl hydroperoxide reductase subunit F; Provisional.	0

>NZ_CP007446.1|WP_025331054.1|1644775_1646731_+|RNA-polymerase-sigma-factor-RpoD
MANSTPKKSTIDTSQEQDDTRPLTAEEQRARLRQLIIQGKERGYITYAEINDALPDEMSDADQIDNIVSMISGLGIQVTEEAPDAESLLMGDNTANMTDDDAVAEAEAALSNADNEFGRTTDPVRMYMREMGQVDLLTREDEIIIAKKIENALRNMIQAISACPGSVAEILALIDAVRKDEIKVDEIVEAIVDPHEELLDELGIGLDTKNEDTEITDDSDDSVDVDDEENDEESAALAASANLEELRQKTLEHFDGIQSLYDTMVATLQEKGSHHDDYLKLQQEIAEQLLQVRFATRQIESLCDNLRMRVNQVRQLEREIRDIALNRVHMERDYFIKSFTNRTTDLGWVDEELSLNRVWNEALRRFQYAIIEKQTELANLEQSAQISLDELKQINKNMVKSEQETAAAKQEMIQANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKMNRISRQYLQENGEEADSAKLAELMEMPEDKIRKIMKIAKEPISMETPIGDDDDSHLGDFIEDANNVAPADAAMYSSLREVTKDVLESLTPREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPTRSDRLKSFLDSDENKQ
>NZ_CP007446.1|WP_025331053.1|1642930_1644715_+|DNA-primase
MIPSEFIDELLNKIDVVDVIEEFVPLKKSGANYMACCPFHKEKSPSFSVSPSKQFYHCFGCGVHGSAIGFIMEYQGLSFQEAVQFLADRIGMTVPRQIGNNNSQAHKALKQQQQTLEQTTADAATFYQQQLKTSPSAQNYLQQRGLSDEIILHYGLGYAPDDWQALAKVFQPYPSNALVNSGMVITKDDRHYDRFRNRIMFPIRSTRGQIIGFGARILDSGEPKYLNSPETPLFDKGRNLYGLYEARAAIKEAQRVLVVEGYMDVVALAQFGLGYAVAALGTATTAEHVRLLMRQSDHIYFCFDGDSAGKKAAWRALENALPQLKDDKILHFLFLPAEHDPDSYVRSYGLKPFEDALLNQSLPLSAYFWQVLTENIDMDTQEGKAELIKTASPLLAQIKAPALSFLLRQELSRKVGIDEHNLAQLLGQELPRPQTIRQKSYQLPRNTFRQPPVMSLVQKQIRALLINPQWAVYIELPEYLDLHGDYACLAALAERIQASVTPLNSGAVLELMRNTEFEPVIRQIIHDYMDSPDVMQPGNEDDCTTFRQGMQKLLDNLKTQQIDALKRKLQHERLSADEKQLLLLLLSPSKMPSV
>NZ_CP007446.1|WP_025331052.1|1642404_1642848_+|GatB/YqeY-domain-containing-protein
MSLKQQLQEDMKTALRNHDSATLSTIRMALAAIKQIEVDERIEVDDTRFTAIISKMVKQRKESVRMYTEAGRTDLAEKEQSEIDLLQNYLPKMLDEAEIDAAIKEAITSTGAAQPSDMGKVMGVLKKTLAGKADMSEVSKKIKQLLN
>NZ_CP007446.1|WP_025331051.1|1642018_1642231_+|30S-ribosomal-protein-S21
MPSVRVKENEPFEVAMRRFKRSVEKTGLMTELRAREAYEKPTTERKRKKAAAVKRLQKRLRSQQLPPKFY
>NZ_CP007446.1|WP_025331050.1|1639215_1641744_+|bifunctional-(p)ppGpp-synthetase/guanosine-3',5'-bis(diphosphate)-3'-pyrophosphohydrolase
MYPPSVPYKPPVNQWRDNLFAHTEYLNKQERWELLEQACAYIYSLADKTGKTALLERSFAITTSLAQNLHRVQALAAVLIKIAFEDLGTSDSHLPSHALGQVGMKILNEINTSAYTDIASQLKCCEQQIENSYHAIITEAQNKLLHTASYLGKDDLRLLGKACEFGATAHQGQFRNSGLPYITHPIAVATQLAEWHVDIQALCAGVLHDVLEDTGTTKEEIIAVFGETIANMVDGLSKLEKLEYNSQQEAQAESFRKLIMAMTQDVRVIIVKLSDRLHNMRTLSAKKPASRRRIAQETMEIYAQLANRIGLNHVYRELQDLAFKHLYPHRYEVLAKAIQSSRRNRRDVVGKVLRAFSQRLVSANIEAQVRGREKNLYSIYEKMRRKNLHFADVMDIYAFRVIVNNIPACYTALGVLHNLYKPKPGRIKDYIAIPKNNGYQSLHTILVGPYGLPIEVQIRTHEMDTIAERGIASYWMHKDGEQNSFDQAQMRTNQWLQSILDIQAHSANAIEFFEHVKTDLFPNEVYVFTPKGKIITLPEGATPVDFAYAVHTGIGNRTVSARINHNLMPLRTRLHTGDTVEIITSSNGHPTPAWLDFAVSSHARSAIRSQIKKMNRSDAIRLGEKLLQKALSSLLPENVLLSDSLKDKYLADLQQKNTSFENILCEVGMGLLQPVSIAMHIAELAGEHFNNTIKLAPINLTGNESTHIHLAKCCHPIPGDTIKALLIKDQGIIIHRDTCNTILKTDPELQLDANWDIMQASNYQTTLCLNAIDSHGLLATIAQAISSNGGDIKSVETTSKKLEGIEGFIEFRFVLQVKDLDQLNQITRDLHSVPQIRRVNRV
>NZ_CP007446.1|WP_025331049.1|1638996_1639200_+|DNA-directed-RNA-polymerase-subunit-omega
MARITVEDCIGRIPNHFDLTMIAALRARQLANGATALVEEDHDKPTVIALREIAGGQIGTELLNQQK
>NZ_CP007446.1|WP_025331048.1|1638334_1638946_+|guanylate-kinase
MLQSGHIFIVSAASGTGKTTLVSRLSACQPDIRISISHTTRMPRDGEQNGIHYHFVSRDEFEQMIAANAFIEHANVYGNYYGTSLKAVESLSKQGYNVILEIDVQGAEQIRRLLPEATSIFILPPSMAELNERLRNRGTDSEDVIAYRLEKSREEIEQSLLFDYVIVNEEITQAENDLLAIIRSVGLRAKAQSQTIIQILSEK
>NZ_CP007446.1|WP_025331047.1|1636551_1638177_-|CTP-synthase
MTKFIFVTGGVVSSLGKGIAAASTAAILESRGLKVTMLKLDPYINVDPGTMSPFQHGEVFVTDDGAETDLDLGHYERFIDATMQKRNNFTSGQVYESVIHKERRGDYLGGTVQVIPHITDEIKRKIHEGAAGFDVAIVEIGGTVGDIESLPFLEAIRQMRSQQGRSNTLFVHLSYVPYIAAAGEIKTKPTQHSVKELREIGIQPDVLICRMDRPMPEEEKRKIALFCNVEERAVISCYDVNSIYEVPAMLHDQGIDNIICEQLQLNVQQADLTAWNKIVYLVQHPKHKVKIAMVGKYVDLTESYKSLSEALKHAGIQTETEVDIHYIDSEALETEGTACLEDMDAILVPGGFGTRGVEGKIAAVRYAREKQIPYLGICLGMQIALIEYARDVANLDGANSTEFDLKTQHPVVALISEWQDRDGQIEKRDVNTNLGGTMRLGAQEVKLADGSLARNIYGNELIRERHRHRYEVNNYYVPQLEQAGLVIGGVSTGHERLVETIELPNHPWFFACQFHPEFTSTPKNGHPLFTAFIKAALAYKK
>NZ_CP007446.1|WP_099048806.1|1635906_1636284_-|DUF3465-domain-containing-protein
MRHSFTAAPAASNPKESVSIEQAQKENLDKVQVYGEGKVIKTLPDDNKGSRHQRFILRTGTDSTVLIVHNIDIAPRLNDLQRDDTVGFSGEYISNNRGGLVHWTHHDPKHRHYDGWLLYKNKRYQ
>NZ_CP007446.1|WP_080690457.1|1635258_1635837_-|HdeD-family-acid-resistance-protein
MVNNFTFRSPLANLLSKNWWIVLLRGIAALIFGLLTWFYPFITIMVMVIFFGVYALIDGVMGVIISINGRKSHQDWWLMLIWGIVSILAGILTFFVPGITWLVLITFIAAWALISGIFQIITAIRLRKTLQGEWWMIIAGILSVLVGVILLIDPVQGGIALTWVIGVYAALFGVMNIALAFRLRRFAIHQVN
>NZ_CP007446.1|WP_025331056.1|1653963_1655514_+|multicopper-oxidase-CueO
MHRRDFLRYSAMVSAAATLPLSAYALNTLDLPVLAIPPLLDTGKDNRIQLTIQQGTSRFGKYQTQTWGYNGALLGPAIRIFRGKPVQIKLQNQLTEATTVHWHGLEVPGEADGGPQACIPAGQARVIEFTSSQPAATCWFHPHQHGQTGRQVAMGLAGLLLLEDTVSTGLPIPKNWGLDDIPLIVQDKKFNAAGQIDYQLDVMSAAIGWFGDTLLCNGQIYPQHNAPRGWLRLRLLNGCNARTLNFACSDGRPLYVIASDGGFLPQPVTVSSLSVLPGERFEVMVDTSNGKAFDLLTLPVKQMGMNLPPFDQPCPIVRVSVLSSRNDASLPDQLTSSLPVLPALSQLVHRHFQLSMDPELDSMGMQALQQLAGKSAMPMEHMSMHQSHMEMMHNMHTDKNALDLMHANRINGQTFDMNKPAFAASKGKYECWEISGLGDMMLHPFHIHGTQFRILNENGQPPAAHRSGWKDTVRVEGGVSKVLVKFNHSAPASFPYMAHCHILEHEDTGMMLGFTV
>NZ_CP007446.1|WP_025331057.1|1655780_1657349_-|alkyl-hydroperoxide-reductase-subunit-F
MLDDTLKNQLKAYLEYVTRPVEIIATLDESKGARDMLALLQEVEALSDKVSLRTDGQSERKPSFEITNPGVHTGLVFAGNPMGHEFSSLVLALLQVGGHPSKEAESLQQQIKNLQGSYHFETYYSITCHNCPDVIQALNLMSILNPNISHTAIDGALFQEEIEAKQIMGVPAVFLNGEPFGQGRMELAEIVAKLDSNAASAAVDELNAKAPFDVLIVGGGPAGAAAAVYAARKGIRTGIVAERFGGQVLDTLDIENYISVLRTDGPRFAHDLESHVRSYDVDIMNLQRVSALVPAKTTGGLIEVHTESGAVLKSRTVILSTGAHWRSMNVPGEQEYRTKGVTYCPHCDGPLFKGKDVAVIGGGNSGAEAAIDLAGVVKHVTLLEFSGKMRADEVLQQKLHSLPNVQIIMNAQTTEVTGENGKVNGLNYLDRVSNTEHHLALEGIFVQIGLLPNTGFLQGTVDLTEPMHEIVIDAFGKTSVPGVFAAGDCTNVPYKQIIIAAGEGAKAALSAFDYLIRTSAAN
>NZ_CP007446.1|WP_025331058.1|1657507_1658074_-|alkyl-hydroperoxide-reductase-subunit-C
MVANVNTEIKPFNTTAFHNGKFVDISDADVKGKWSIFFFYPADFTFVCPTELGDLADHYEELQKLGVEVYSVSTDTHFTHKAWHDASDTIAKIKYFMLGDRNATLTTNFGVLREGQGSADRATFLVDPQGIIQCVEVTAEGIGREASDLVRKVKAAQYVASHPGEVCPAKWKEGEKTLAPSLELVGKI
>NZ_CP007446.1|WP_025331059.1|1658508_1659108_+|DUF2238-domain-containing-protein
MKTHILQLIIFILVLIWSAYQPHDYPTWWLEVFPALLGLILLVFTYSRFRFSQLMYWVVLVHAIILLIGGHYTYAEEPVFNYLRGVFGWTRNNYDKLGHFFQGFSPAIIASELLWRLQIVRYRGWVIFLSGCVCMTISAIYELFEWLVAILSNQEAVTFLGTQGDVWDTQKDMLWCLIGCSTMLIYLYFSKRHLRRPSR
>NZ_CP007446.1|WP_025331060.1|1659226_1659514_-|hypothetical-protein
MNQTAEFATNSNELSVQLAHKEQKFKRVKFYFNVIFALCFLVFAVGLVWMNTMAIASSFITAMMFGMAYLGVIMIFEEDIKELKIKLEKTQSVSA
>NZ_CP007446.1|WP_025331061.1|1660024_1660474_-|ClpXP-protease-specificity-enhancing-factor
MNKLNTKPYILRALYEWALDSGYTPHIAVWVNDKTQVPLQYVKDNEIVLNIGPVAAHNLNIDNEWVSFSARFGGVSHDIWIPVGHVISLFARETGDGMGFDVEPLTENSEHPTAGEDNTVSESQPSVSESLPADDSNKSGAKKGLKIVK
>NZ_CP007446.1|WP_025331062.1|1660498_1661104_-|glutathione-S-transferase-N-terminal-domain-containing-protein
MMTLYAGITCPFSQRCSFVLYEKGMDFEIKDVDVFNKPEDLAVMNPYNQVPVLVERDLILYESNIINEYIDERFPHPQLMPADPIMRGRGRLVLYRLEKELFSHVLVLENPESSNKEMNKAREAITQGLTMLAPAFTKNKYIIGDDFSMIDVALAPLLWRLDHYDIKLPKSAAPLLKYAERIFQREAFIDALTPAEKAMRR
>NZ_CP007446.1|WP_025331063.1|1661262_1662015_-|Nif3-like-dinuclear-metal-center-hexameric-protein
MAFRKEILGWCAQELAVAQFRDYSPNGLQIEGRDEVSTIVCAVTASQAAIDFAVKQQADMLLVHHGMFWKNEAAVITGWKKRRIQTLLANNINLVGYHLPLDAHPRLGNNVQLAQRLGWQITGCGGEQNLIQYGALTYEQTAEQLAQGIELGLNHKPILLCADKQQPVRRLAWCTGGGQSFFQQAIDAGVDAFITGEISEPQYHLAQECGVVFIAAGHHATERYGIQALACALASEFGITQQFFDEPNPA
>NZ_CP007446.1|WP_025331064.1|1662289_1663114_+|hypothetical-protein
MKTLFLLLILSLCGYLNSNNDRAQDKIKKLEEQRIMTDTTEITVRIPSKVSDKKLEITLPRCFFGTNLKHQIIDGKVEEIAVSIMYQLPTFSDFPNNEEAIYQCPDFSKPITTLGIFPLFPIVGKTELEYGNYWLKQQYFRFSIKEQKNNLALYRAGIDRKLAIFANQSDRSQQDISIEFWPFDSNNKDDSYPHQTDIHSVLYEEFGLSYTIYSSRYLHGKNKPLVSQNYFADGLIQIYMHNESLLDHPEIQLGFIQNNNRILDYIHQHSKVVD
>NZ_CP007446.1|WP_025331065.1|1663212_1664043_+|hypothetical-protein
MKYWLCILLLCLTGCFNGSSEQDKIKKMEEQRIMTDTTEITVRIPSKVSGKKLEITLPRCMFGFSIKNKIIDGIVEQKAAAVIFALPTLSGFPNDEEAIHRCPDFSKPVVGLSFAPLYRNIKAEKLEYGNHWFKRENYRFRLKEKKNNQELYYIGISGKQTMFINKSETNQQDLRIDFWPFDVKDEYNAFPHQIDIYSVLDKEFSVAYTVYSSRFLHGKYKPPVSQNYFADGLIQIYKHNESLLDHPEIQLGFIQNNNRILDYIHQHSKVVTDQNH

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP007446_1	1.1\|255846\|31\|NZ_CP007446\|CRISPRCasFinder	255846-255876	31	NZ_CP020749	Bacillus mycoides strain Gnyt1 plasmid unnamed6, complete sequence	61548-61578	6	0.806
NZ_CP007446_1	1.2\|255900\|31\|NZ_CP007446\|CRISPRCasFinder	255900-255930	31	NZ_CP023071	Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence	596577-596607	7	0.774
NZ_CP007446_1	1.2\|255900\|31\|NZ_CP007446\|CRISPRCasFinder	255900-255930	31	NZ_CP025431	Paracoccus zhejiangensis strain J6 plasmid pPZ01, complete sequence	237697-237727	7	0.774
NZ_CP007446_1	1.1\|255846\|31\|NZ_CP007446\|CRISPRCasFinder	255846-255876	31	NC_021530	Synechococcus phage S-CAM8 strain S-CAM8 06008BI06, complete genome	53785-53815	8	0.742
NZ_CP007446_1	1.1\|255846\|31\|NZ_CP007446\|CRISPRCasFinder	255846-255876	31	JF974299	Synechococcus phage S-CAM8 strain 0608SB47, * SEQUENCING IN PROGRESS *, 4 unordered pieces	65752-65782	8	0.742
NZ_CP007446_1	1.2\|255900\|31\|NZ_CP007446\|CRISPRCasFinder	255900-255930	31	NZ_LR134399	Listeria monocytogenes strain NCTC7974 plasmid 2, complete sequence	320822-320852	8	0.742
NZ_CP007446_1	1.3\|255954\|31\|NZ_CP007446\|CRISPRCasFinder	255954-255984	31	KJ019086	Synechococcus phage ACG-2014f isolate Syn7803US17, complete genome	186757-186787	8	0.742
NZ_CP007446_1	1.3\|255954\|31\|NZ_CP007446\|CRISPRCasFinder	255954-255984	31	KJ019107	Synechococcus phage ACG-2014f isolate Syn7803US52, complete genome	181263-181293	8	0.742
NZ_CP007446_1	1.3\|255954\|31\|NZ_CP007446\|CRISPRCasFinder	255954-255984	31	KJ019143	Synechococcus phage ACG-2014f isolate Syn7803C12, complete genome	183927-183957	8	0.742
NZ_CP007446_1	1.3\|255954\|31\|NZ_CP007446\|CRISPRCasFinder	255954-255984	31	KJ019103	Synechococcus phage ACG-2014f isolate Syn7803US44, complete genome	185802-185832	8	0.742
NZ_CP007446_1	1.3\|255954\|31\|NZ_CP007446\|CRISPRCasFinder	255954-255984	31	KJ019102	Synechococcus phage ACG-2014f isolate Syn7803US43, complete genome	185377-185407	8	0.742
NZ_CP007446_1	1.3\|255954\|31\|NZ_CP007446\|CRISPRCasFinder	255954-255984	31	KJ019066	Synechococcus phage ACG-2014f isolate Syn7803C9, complete genome	186614-186644	8	0.742
NZ_CP007446_1	1.3\|255954\|31\|NZ_CP007446\|CRISPRCasFinder	255954-255984	31	KJ019142	Synechococcus phage ACG-2014f isolate Syn7803C11, complete genome	183224-183254	8	0.742
NZ_CP007446_1	1.3\|255954\|31\|NZ_CP007446\|CRISPRCasFinder	255954-255984	31	KJ019105	Synechococcus phage ACG-2014f isolate Syn7803US4, complete genome	182709-182739	8	0.742
NZ_CP007446_1	1.3\|255954\|31\|NZ_CP007446\|CRISPRCasFinder	255954-255984	31	KJ019098	Synechococcus phage ACG-2014f isolate Syn7803US39, complete genome	187217-187247	8	0.742
NZ_CP007446_1	1.3\|255954\|31\|NZ_CP007446\|CRISPRCasFinder	255954-255984	31	KJ019159	Synechococcus phage ACG-2014f isolate Syn7803C34, complete genome	185548-185578	8	0.742
NZ_CP007446_1	1.3\|255954\|31\|NZ_CP007446\|CRISPRCasFinder	255954-255984	31	KJ019111	Synechococcus phage ACG-2014f isolate Syn7803US57, complete genome	182527-182557	8	0.742
NZ_CP007446_1	1.3\|255954\|31\|NZ_CP007446\|CRISPRCasFinder	255954-255984	31	NC_047712	Synechococcus phage ACG-2014f isolate Syn7803C7, complete genome	183389-183419	8	0.742
NZ_CP007446_1	1.3\|255954\|31\|NZ_CP007446\|CRISPRCasFinder	255954-255984	31	KJ019090	Synechococcus phage ACG-2014f isolate Syn7803US24, complete genome	185537-185567	8	0.742
NZ_CP007446_1	1.3\|255954\|31\|NZ_CP007446\|CRISPRCasFinder	255954-255984	31	KJ019146	Synechococcus phage ACG-2014f isolate Syn7803C16, complete genome	185916-185946	8	0.742
NZ_CP007446_1	1.3\|255954\|31\|NZ_CP007446\|CRISPRCasFinder	255954-255984	31	KJ019152	Synechococcus phage ACG-2014f isolate Syn7803C25, complete genome	186526-186556	8	0.742
NZ_CP007446_1	1.3\|255954\|31\|NZ_CP007446\|CRISPRCasFinder	255954-255984	31	KJ019151	Synechococcus phage ACG-2014f isolate Syn7803C24, complete genome	184986-185016	8	0.742
NZ_CP007446_1	1.3\|255954\|31\|NZ_CP007446\|CRISPRCasFinder	255954-255984	31	KJ019150	Synechococcus phage ACG-2014f isolate Syn7803C22, complete genome	187052-187082	8	0.742
NZ_CP007446_1	1.3\|255954\|31\|NZ_CP007446\|CRISPRCasFinder	255954-255984	31	NC_026927	Synechococcus phage ACG-2014f isolate Syn7803C90, complete genome	188289-188319	8	0.742
NZ_CP007446_1	1.3\|255954\|31\|NZ_CP007446\|CRISPRCasFinder	255954-255984	31	KJ019045	Synechococcus phage ACG-2014f isolate Syn7803C6, complete genome	186138-186168	8	0.742
NZ_CP007446_1	1.3\|255954\|31\|NZ_CP007446\|CRISPRCasFinder	255954-255984	31	KJ019037	Synechococcus phage ACG-2014f isolate Syn7803C58, complete genome	185664-185694	8	0.742
NZ_CP007446_1	1.3\|255954\|31\|NZ_CP007446\|CRISPRCasFinder	255954-255984	31	KJ019099	Synechococcus phage ACG-2014f isolate Syn7803US3, complete genome	185938-185968	8	0.742
NZ_CP007446_1	1.3\|255954\|31\|NZ_CP007446\|CRISPRCasFinder	255954-255984	31	KJ019155	Synechococcus phage ACG-2014f isolate Syn7803C29, complete genome	182570-182600	8	0.742
NZ_CP007446_1	1.3\|255954\|31\|NZ_CP007446\|CRISPRCasFinder	255954-255984	31	KJ019085	Synechococcus phage ACG-2014f isolate Syn7803US13, complete genome	182330-182360	8	0.742
NZ_CP007446_1	1.3\|255954\|31\|NZ_CP007446\|CRISPRCasFinder	255954-255984	31	KJ019144	Synechococcus phage ACG-2014f isolate Syn7803C14, complete genome	182537-182567	8	0.742
NZ_CP007446_1	1.3\|255954\|31\|NZ_CP007446\|CRISPRCasFinder	255954-255984	31	KJ019145	Synechococcus phage ACG-2014f isolate Syn7803C15, complete genome	185668-185698	8	0.742
NZ_CP007446_1	1.3\|255954\|31\|NZ_CP007446\|CRISPRCasFinder	255954-255984	31	KJ019092	Synechococcus phage ACG-2014f isolate Syn7803US2, complete genome	184967-184997	8	0.742
NZ_CP007446_1	1.2\|255900\|31\|NZ_CP007446\|CRISPRCasFinder	255900-255930	31	NZ_CP017941	Phyllobacterium zundukense strain Tri-48 plasmid unnamed1, complete sequence	617147-617177	9	0.71
NZ_CP007446_1	1.2\|255900\|31\|NZ_CP007446\|CRISPRCasFinder	255900-255930	31	NZ_CP043441	Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence	807041-807071	9	0.71
NZ_CP007446_1	1.3\|255954\|31\|NZ_CP007446\|CRISPRCasFinder	255954-255984	31	MT586120	Synechococcus phage S-CAM7 isolate 0809CC03, complete genome	191770-191800	10	0.677
NZ_CP007446_1	1.3\|255954\|31\|NZ_CP007446\|CRISPRCasFinder	255954-255984	31	NC_031927	Synechococcus phage S-CAM7 isolate 0910CC49, complete genome	190452-190482	10	0.677
NZ_CP007446_1	1.3\|255954\|31\|NZ_CP007446\|CRISPRCasFinder	255954-255984	31	KU686213	Synechococcus phage S-CAM7 isolate 0910SB42, complete genome	192871-192901	10	0.677

1. spacer 1.1|255846|31|NZ_CP007446|CRISPRCasFinder matches to NZ_CP020749 (Bacillus mycoides strain Gnyt1 plasmid unnamed6, complete sequence) position: , mismatch: 6, identity: 0.806

gcaccaccatttaatgtatcacaaccgtagt	CRISPR spacer
tcattaccatttgatgtatcagaaccgtaat	Protospacer
 **..*******.******** *******.*

2. spacer 1.2|255900|31|NZ_CP007446|CRISPRCasFinder matches to NZ_CP023071 (Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence) position: , mismatch: 7, identity: 0.774

ttttctccgttgagttcgtcattgccatcgc	CRISPR spacer
aggcccccgttgagaacgtcattgccatcgc	Protospacer
   .*.********  ***************

3. spacer 1.2|255900|31|NZ_CP007446|CRISPRCasFinder matches to NZ_CP025431 (Paracoccus zhejiangensis strain J6 plasmid pPZ01, complete sequence) position: , mismatch: 7, identity: 0.774

ttttctccgttgagttcgtcattgccatcgc	CRISPR spacer
aatcccccgttgagtttgtcgttgccatcac	Protospacer
  *.*.**********.***.********.*

4. spacer 1.1|255846|31|NZ_CP007446|CRISPRCasFinder matches to NC_021530 (Synechococcus phage S-CAM8 strain S-CAM8 06008BI06, complete genome) position: , mismatch: 8, identity: 0.742

gcaccacc-----atttaatgtatcacaaccgtagt	CRISPR spacer
-----actggtggatttaatgtatcaccaccgtagg	Protospacer
     **.     ************** *******

5. spacer 1.1|255846|31|NZ_CP007446|CRISPRCasFinder matches to JF974299 (Synechococcus phage S-CAM8 strain 0608SB47, *** SEQUENCING IN PROGRESS ***, 4 unordered pieces) position: , mismatch: 8, identity: 0.742

gcaccacc-----atttaatgtatcacaaccgtagt	CRISPR spacer
-----actggtggatttaatgtatcaccaccgtagg	Protospacer
     **.     ************** *******

6. spacer 1.2|255900|31|NZ_CP007446|CRISPRCasFinder matches to NZ_LR134399 (Listeria monocytogenes strain NCTC7974 plasmid 2, complete sequence) position: , mismatch: 8, identity: 0.742

ttttctccgttgagttcgtcattgccatcgc	CRISPR spacer
ttttctccgttgtgttcgccattcaagaagc	Protospacer
************ *****.****   .  **

7. spacer 1.3|255954|31|NZ_CP007446|CRISPRCasFinder matches to KJ019086 (Synechococcus phage ACG-2014f isolate Syn7803US17, complete genome) position: , mismatch: 8, identity: 0.742

tttctaccccacagaacatcattaccataac	CRISPR spacer
cttctaccacacagaacatcactaaggcatc	Protospacer
.******* ************.**  ..* *

8. spacer 1.3|255954|31|NZ_CP007446|CRISPRCasFinder matches to KJ019107 (Synechococcus phage ACG-2014f isolate Syn7803US52, complete genome) position: , mismatch: 8, identity: 0.742

tttctaccccacagaacatcattaccataac	CRISPR spacer
cttctaccacacagaacatcactaaggcatc	Protospacer
.******* ************.**  ..* *

9. spacer 1.3|255954|31|NZ_CP007446|CRISPRCasFinder matches to KJ019143 (Synechococcus phage ACG-2014f isolate Syn7803C12, complete genome) position: , mismatch: 8, identity: 0.742

tttctaccccacagaacatcattaccataac	CRISPR spacer
cttctaccacacagaacatcactaaggcatc	Protospacer
.******* ************.**  ..* *

10. spacer 1.3|255954|31|NZ_CP007446|CRISPRCasFinder matches to KJ019103 (Synechococcus phage ACG-2014f isolate Syn7803US44, complete genome) position: , mismatch: 8, identity: 0.742

tttctaccccacagaacatcattaccataac	CRISPR spacer
cttctaccacacagaacatcactaaggcatc	Protospacer
.******* ************.**  ..* *

11. spacer 1.3|255954|31|NZ_CP007446|CRISPRCasFinder matches to KJ019102 (Synechococcus phage ACG-2014f isolate Syn7803US43, complete genome) position: , mismatch: 8, identity: 0.742

tttctaccccacagaacatcattaccataac	CRISPR spacer
cttctaccacacagaacatcactaaggcatc	Protospacer
.******* ************.**  ..* *

12. spacer 1.3|255954|31|NZ_CP007446|CRISPRCasFinder matches to KJ019066 (Synechococcus phage ACG-2014f isolate Syn7803C9, complete genome) position: , mismatch: 8, identity: 0.742

tttctaccccacagaacatcattaccataac	CRISPR spacer
cttctaccacacagaacatcactaaggcatc	Protospacer
.******* ************.**  ..* *

13. spacer 1.3|255954|31|NZ_CP007446|CRISPRCasFinder matches to KJ019142 (Synechococcus phage ACG-2014f isolate Syn7803C11, complete genome) position: , mismatch: 8, identity: 0.742

tttctaccccacagaacatcattaccataac	CRISPR spacer
cttctaccacacagaacatcactaaggcatc	Protospacer
.******* ************.**  ..* *

14. spacer 1.3|255954|31|NZ_CP007446|CRISPRCasFinder matches to KJ019105 (Synechococcus phage ACG-2014f isolate Syn7803US4, complete genome) position: , mismatch: 8, identity: 0.742

tttctaccccacagaacatcattaccataac	CRISPR spacer
cttctaccacacagaacatcactaaggcatc	Protospacer
.******* ************.**  ..* *

15. spacer 1.3|255954|31|NZ_CP007446|CRISPRCasFinder matches to KJ019098 (Synechococcus phage ACG-2014f isolate Syn7803US39, complete genome) position: , mismatch: 8, identity: 0.742

tttctaccccacagaacatcattaccataac	CRISPR spacer
cttctaccacacagaacatcactaaggcatc	Protospacer
.******* ************.**  ..* *

16. spacer 1.3|255954|31|NZ_CP007446|CRISPRCasFinder matches to KJ019159 (Synechococcus phage ACG-2014f isolate Syn7803C34, complete genome) position: , mismatch: 8, identity: 0.742

tttctaccccacagaacatcattaccataac	CRISPR spacer
cttctaccacacagaacatcactaaggcatc	Protospacer
.******* ************.**  ..* *

17. spacer 1.3|255954|31|NZ_CP007446|CRISPRCasFinder matches to KJ019111 (Synechococcus phage ACG-2014f isolate Syn7803US57, complete genome) position: , mismatch: 8, identity: 0.742

tttctaccccacagaacatcattaccataac	CRISPR spacer
cttctaccacacagaacatcactaaggcatc	Protospacer
.******* ************.**  ..* *

18. spacer 1.3|255954|31|NZ_CP007446|CRISPRCasFinder matches to NC_047712 (Synechococcus phage ACG-2014f isolate Syn7803C7, complete genome) position: , mismatch: 8, identity: 0.742

tttctaccccacagaacatcattaccataac	CRISPR spacer
cttctaccacacagaacatcactaaggcatc	Protospacer
.******* ************.**  ..* *

19. spacer 1.3|255954|31|NZ_CP007446|CRISPRCasFinder matches to KJ019090 (Synechococcus phage ACG-2014f isolate Syn7803US24, complete genome) position: , mismatch: 8, identity: 0.742

tttctaccccacagaacatcattaccataac	CRISPR spacer
cttctaccacacagaacatcactaaggcatc	Protospacer
.******* ************.**  ..* *

20. spacer 1.3|255954|31|NZ_CP007446|CRISPRCasFinder matches to KJ019146 (Synechococcus phage ACG-2014f isolate Syn7803C16, complete genome) position: , mismatch: 8, identity: 0.742

tttctaccccacagaacatcattaccataac	CRISPR spacer
cttctaccacacagaacatcactaaggcatc	Protospacer
.******* ************.**  ..* *

21. spacer 1.3|255954|31|NZ_CP007446|CRISPRCasFinder matches to KJ019152 (Synechococcus phage ACG-2014f isolate Syn7803C25, complete genome) position: , mismatch: 8, identity: 0.742

tttctaccccacagaacatcattaccataac	CRISPR spacer
cttctaccacacagaacatcactaaggcatc	Protospacer
.******* ************.**  ..* *

22. spacer 1.3|255954|31|NZ_CP007446|CRISPRCasFinder matches to KJ019151 (Synechococcus phage ACG-2014f isolate Syn7803C24, complete genome) position: , mismatch: 8, identity: 0.742

tttctaccccacagaacatcattaccataac	CRISPR spacer
cttctaccacacagaacatcactaaggcatc	Protospacer
.******* ************.**  ..* *

23. spacer 1.3|255954|31|NZ_CP007446|CRISPRCasFinder matches to KJ019150 (Synechococcus phage ACG-2014f isolate Syn7803C22, complete genome) position: , mismatch: 8, identity: 0.742

tttctaccccacagaacatcattaccataac	CRISPR spacer
cttctaccacacagaacatcactaaggcatc	Protospacer
.******* ************.**  ..* *

24. spacer 1.3|255954|31|NZ_CP007446|CRISPRCasFinder matches to NC_026927 (Synechococcus phage ACG-2014f isolate Syn7803C90, complete genome) position: , mismatch: 8, identity: 0.742

tttctaccccacagaacatcattaccataac	CRISPR spacer
cttctaccacacagaacatcactaaggcatc	Protospacer
.******* ************.**  ..* *

25. spacer 1.3|255954|31|NZ_CP007446|CRISPRCasFinder matches to KJ019045 (Synechococcus phage ACG-2014f isolate Syn7803C6, complete genome) position: , mismatch: 8, identity: 0.742

tttctaccccacagaacatcattaccataac	CRISPR spacer
cttctaccacacagaacatcactaaggcatc	Protospacer
.******* ************.**  ..* *

26. spacer 1.3|255954|31|NZ_CP007446|CRISPRCasFinder matches to KJ019037 (Synechococcus phage ACG-2014f isolate Syn7803C58, complete genome) position: , mismatch: 8, identity: 0.742

tttctaccccacagaacatcattaccataac	CRISPR spacer
cttctaccacacagaacatcactaaggcatc	Protospacer
.******* ************.**  ..* *

27. spacer 1.3|255954|31|NZ_CP007446|CRISPRCasFinder matches to KJ019099 (Synechococcus phage ACG-2014f isolate Syn7803US3, complete genome) position: , mismatch: 8, identity: 0.742

tttctaccccacagaacatcattaccataac	CRISPR spacer
cttctaccacacagaacatcactaaggcatc	Protospacer
.******* ************.**  ..* *

28. spacer 1.3|255954|31|NZ_CP007446|CRISPRCasFinder matches to KJ019155 (Synechococcus phage ACG-2014f isolate Syn7803C29, complete genome) position: , mismatch: 8, identity: 0.742

tttctaccccacagaacatcattaccataac	CRISPR spacer
cttctaccacacagaacatcactaaggcatc	Protospacer
.******* ************.**  ..* *

29. spacer 1.3|255954|31|NZ_CP007446|CRISPRCasFinder matches to KJ019085 (Synechococcus phage ACG-2014f isolate Syn7803US13, complete genome) position: , mismatch: 8, identity: 0.742

tttctaccccacagaacatcattaccataac	CRISPR spacer
cttctaccacacagaacatcactaaggcatc	Protospacer
.******* ************.**  ..* *

30. spacer 1.3|255954|31|NZ_CP007446|CRISPRCasFinder matches to KJ019144 (Synechococcus phage ACG-2014f isolate Syn7803C14, complete genome) position: , mismatch: 8, identity: 0.742

tttctaccccacagaacatcattaccataac	CRISPR spacer
cttctaccacacagaacatcactaaggcatc	Protospacer
.******* ************.**  ..* *

31. spacer 1.3|255954|31|NZ_CP007446|CRISPRCasFinder matches to KJ019145 (Synechococcus phage ACG-2014f isolate Syn7803C15, complete genome) position: , mismatch: 8, identity: 0.742

tttctaccccacagaacatcattaccataac	CRISPR spacer
cttctaccacacagaacatcactaaggcatc	Protospacer
.******* ************.**  ..* *

32. spacer 1.3|255954|31|NZ_CP007446|CRISPRCasFinder matches to KJ019092 (Synechococcus phage ACG-2014f isolate Syn7803US2, complete genome) position: , mismatch: 8, identity: 0.742

tttctaccccacagaacatcattaccataac	CRISPR spacer
cttctaccacacagaacatcactaaggcatc	Protospacer
.******* ************.**  ..* *

33. spacer 1.2|255900|31|NZ_CP007446|CRISPRCasFinder matches to NZ_CP017941 (Phyllobacterium zundukense strain Tri-48 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.71

ttttctccgttgagttcgtcattgccatcgc	CRISPR spacer
gtttctccggtgagttcggcattgaacacat	Protospacer
 ******** ******** *****    *..

34. spacer 1.2|255900|31|NZ_CP007446|CRISPRCasFinder matches to NZ_CP043441 (Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.71

ttttctccgttgagttcgtcattgccatcgc	CRISPR spacer
cgcgcgtcgtcgagttcggcattgccatcga	Protospacer
. . * .***.******* ***********

35. spacer 1.3|255954|31|NZ_CP007446|CRISPRCasFinder matches to MT586120 (Synechococcus phage S-CAM7 isolate 0809CC03, complete genome) position: , mismatch: 10, identity: 0.677

tttctaccccacagaacatcattaccataac	CRISPR spacer
tttctactccacaaaacatcattgatgcggt	Protospacer
*******.*****.*********. ......

36. spacer 1.3|255954|31|NZ_CP007446|CRISPRCasFinder matches to NC_031927 (Synechococcus phage S-CAM7 isolate 0910CC49, complete genome) position: , mismatch: 10, identity: 0.677

tttctaccccacagaacatcattaccataac	CRISPR spacer
tttctactccacaaaacatcattgatgcggt	Protospacer
*******.*****.*********. ......

37. spacer 1.3|255954|31|NZ_CP007446|CRISPRCasFinder matches to KU686213 (Synechococcus phage S-CAM7 isolate 0910SB42, complete genome) position: , mismatch: 10, identity: 0.677

tttctaccccacagaacatcattaccataac	CRISPR spacer
tttctactccacaaaacatcattgatgcggt	Protospacer
*******.*****.*********. ......

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

31428 : 39607

Lake_Baikal_phage(14.29%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_025329678.1\|31428_31686_-	glutaredoxin 3	A0A2H4N7T8	Lake_Baikal_phage	4.0e-12	46.8
WP_025329679.1\|31829_32483_+	cell division ATP-binding protein FtsE	G3M9Y6	Bacillus_virus	6.6e-19	28.3
WP_025329680.1\|32473_33391_+	FtsX-like permease family protein	NA	NA	NA	NA
WP_025329681.1\|33453_34509_-	3-deoxy-7-phosphoheptulonate synthase AroG	A0A0B6VT43	Edwardsiella_phage	1.2e-83	47.3
WP_025329682.1\|34830_35301_+	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	E7DN65	Pneumococcus_phage	3.4e-49	60.6
WP_025329683.1\|35401_36061_+	7-cyano-7-deazaguanine/7-aminomethyl-7- deazaguanine transporter	A0A2I7SAW6	Vibrio_phage	6.8e-56	55.2
WP_096766013.1\|36191_37295_+	peptide chain release factor 2	W8EDB3	Pseudomonas_phage	6.4e-06	34.6
WP_038648558.1\|37355_38177_+	glycosyltransferase family 2 protein	NA	NA	NA	NA
WP_025329685.1\|38236_39607_+	adenylosuccinate lyase	A0A2H4UUU6	Bodo_saltans_virus	3.0e-106	44.2

DBSCAN-SWA_2

55547 : 130610

Staphylococcus_phage(12.5%)

transposase,integrase,plate,tRNA,protease

attL 103402:103419|attR 140335:140352

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_025329701.1\|55547_56888_+\|protease	RIP metalloprotease RseP	NA	NA	NA	NA
WP_025329702.1\|56891_59267_+	outer membrane protein assembly factor BamA	NA	NA	NA	NA
WP_025329703.1\|59291_59789_+	OmpH family outer membrane protein	NA	NA	NA	NA
WP_025329704.1\|59799_60861_+	UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase	NA	NA	NA	NA
WP_025329705.1\|60865_61324_+	3-hydroxyacyl-ACP dehydratase FabZ	NA	NA	NA	NA
WP_025329706.1\|61395_62172_+	acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase	NA	NA	NA	NA
WP_025329707.1\|62882_63299_-	biopolymer transporter ExbD	NA	NA	NA	NA
WP_025329708.1\|63301_63967_-	MotA/TolQ/ExbB proton channel family protein	NA	NA	NA	NA
WP_025329709.1\|64050_64824_-	energy transducer TonB	NA	NA	NA	NA
WP_038649119.1\|71872_72277_+	hypothetical protein	NA	NA	NA	NA
WP_025329710.1\|72278_72548_+	HPr family phosphocarrier protein	NA	NA	NA	NA
WP_025329711.1\|72547_74305_+	phosphoenolpyruvate--protein phosphotransferase	NA	NA	NA	NA
WP_025329712.1\|74660_77300_+\|tRNA	leucine--tRNA ligase	A0A2H4PQS0	Staphylococcus_phage	5.3e-184	40.5
WP_025329713.1\|77408_79787_-	glucose/quinate/shikimate family membrane-bound PQQ-dependent dehydrogenase	NA	NA	NA	NA
WP_025329714.1\|80548_83149_+	autotransporter outer membrane beta-barrel domain-containing protein	NA	NA	NA	NA
WP_025329715.1\|83511_83853_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_025329716.1\|83941_84694_+	SDR family oxidoreductase	A0A0M4JSW6	Mollivirus	1.6e-08	26.2
WP_025329717.1\|84722_85643_-	homoserine kinase	NA	NA	NA	NA
WP_025329718.1\|86038_87427_+	L-cystine transporter	NA	NA	NA	NA
WP_025329719.1\|87655_88771_-	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_025329720.1\|89018_90557_+	murein biosynthesis integral membrane protein MurJ	NA	NA	NA	NA
WP_025329721.1\|90602_90911_-	chorismate mutase	NA	NA	NA	NA
WP_025329722.1\|91343_91700_+	NADH-quinone oxidoreductase subunit A	NA	NA	NA	NA
WP_025329723.1\|91690_92170_+	NADH-quinone oxidoreductase subunit B	NA	NA	NA	NA
WP_025329724.1\|92183_92771_+	NADH-quinone oxidoreductase subunit C	NA	NA	NA	NA
WP_025329725.1\|92763_94017_+	NADH-quinone oxidoreductase subunit D	NA	NA	NA	NA
WP_025329726.1\|94016_94490_+	NADH-quinone oxidoreductase subunit NuoE	NA	NA	NA	NA
WP_025329727.1\|94489_95785_+	NADH-quinone oxidoreductase subunit NuoF	NA	NA	NA	NA
WP_025329728.1\|95817_98070_+	NADH-quinone oxidoreductase subunit G	NA	NA	NA	NA
WP_025329729.1\|98072_99122_+	NADH-quinone oxidoreductase subunit NuoH	NA	NA	NA	NA
WP_025329730.1\|99140_99620_+	NADH-quinone oxidoreductase subunit NuoI	NA	NA	NA	NA
WP_025329731.1\|99629_100286_+	NADH-quinone oxidoreductase subunit J	NA	NA	NA	NA
WP_025329732.1\|100282_100588_+	NADH-quinone oxidoreductase subunit NuoK	NA	NA	NA	NA
WP_025329733.1\|100614_102639_+	NADH-quinone oxidoreductase subunit L	NA	NA	NA	NA
WP_025329734.1\|102676_104170_+	NADH-quinone oxidoreductase subunit M	NA	NA	NA	NA
103402:103419	attL	NA	NA	NA	NA
WP_025329735.1\|104180_105623_+	NADH-quinone oxidoreductase subunit NuoN	NA	NA	NA	NA
WP_038648569.1\|105752_106886_+	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	1.1e-58	40.5
WP_144353303.1\|107177_107525_-	hypothetical protein	NA	NA	NA	NA
WP_025329738.1\|107984_111623_-	autotransporter outer membrane beta-barrel domain-containing protein	NA	NA	NA	NA
WP_025329739.1\|112444_113131_+	phosphate regulon transcriptional regulator PhoB	W8CYM9	Bacillus_phage	1.9e-29	34.8
WP_038648572.1\|113169_114531_+	phosphate regulon sensor histidine kinase PhoR	A0A1V0SGX0	Hokovirus	8.1e-19	32.5
WP_080690475.1\|114578_115706_-\|integrase	site-specific integrase	S5FNS2	Shigella_phage	2.2e-70	41.0
WP_051506523.1\|115603_115927_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_025329742.1\|116892_117150_-	hypothetical protein	NA	NA	NA	NA
WP_080690416.1\|118152_118338_-	type II toxin-antitoxin system HicB family antitoxin	A0A0A8JBA5	Ralstonia_phage	2.6e-05	47.1
WP_025329745.1\|118660_119212_+	50S ribosomal protein L7/L12-serine acetyltransferase	NA	NA	NA	NA
WP_086327420.1\|119344_119434_-\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_157784996.1\|119842_120094_-\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_025329746.1\|120676_121576_-	DNA adenine methylase	A0A2K9R7J9	Dishui_lake_phycodnavirus	5.3e-19	25.5
WP_025329747.1\|121575_123183_-	hypothetical protein	NA	NA	NA	NA
WP_180297659.1\|123420_123975_-	hypothetical protein	NA	NA	NA	NA
WP_180297658.1\|123911_124445_-	hypothetical protein	NA	NA	NA	NA
WP_025329748.1\|124441_124711_-	plasmid mobilization relaxosome protein MobC	NA	NA	NA	NA
WP_025329749.1\|125475_125844_+	hypothetical protein	NA	NA	NA	NA
WP_051506526.1\|126581_127667_-	ImpA family type VI secretion system protein	NA	NA	NA	NA
WP_025329751.1\|127674_128727_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_025329752.1\|128726_130610_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
140335:140352	attR	NA	NA	NA	NA

DBSCAN-SWA_3

549920 : 582677

Acinetobacter_phage(52.63%)

plate,tail,terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_051506377.1\|549920_550667_+	LexA family transcriptional regulator	Q7Y5W5	Haemophilus_phage	5.2e-20	36.9
WP_025330106.1\|550728_551451_-	helix-turn-helix domain-containing protein	F1C5C2	Cronobacter_phage	5.1e-12	29.0
WP_144353316.1\|551564_551669_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_099048780.1\|551825_552392_+	hypothetical protein	A0A088FAW9	Sulfitobacter_phage	3.9e-07	52.0
WP_144353315.1\|552406_552664_+	hypothetical protein	NA	NA	NA	NA
WP_025330109.1\|552660_553176_+	hypothetical protein	A0A166Y0E3	Gordonia_phage	2.6e-26	41.1
WP_025330110.1\|553165_553519_+	hypothetical protein	NA	NA	NA	NA
WP_025330111.1\|553448_553796_+	hypothetical protein	A0A2H4J7A6	uncultured_Caudovirales_phage	1.1e-36	61.7
WP_025330112.1\|553798_554398_+	DUF1367 family protein	I3PV01	Vibrio_phage	2.6e-46	46.2
WP_025330113.1\|554400_554694_+	DUF1364 domain-containing protein	A0A220NQY2	Salmonella_phage	2.8e-30	67.0
WP_038648687.1\|554704_555205_+	hypothetical protein	NA	NA	NA	NA
WP_025330115.1\|555367_555799_-	type II toxin-antitoxin system HicB family antitoxin	A0A0R6PH90	Moraxella_phage	2.5e-35	58.1
WP_025330116.1\|555960_556134_-	type II toxin-antitoxin system HicA family toxin	A0A0M3LQ86	Mannheimia_phage	1.9e-10	56.1
WP_025330117.1\|556410_556659_-	helix-turn-helix transcriptional regulator	A0A1S5NNJ5	Burkholderia_phage	9.2e-14	58.1
WP_025330118.1\|556655_557081_-	type II toxin-antitoxin system HicB family antitoxin	Q775F5	Haemophilus_virus	3.9e-20	40.6
WP_025330119.1\|557112_557295_-	type II toxin-antitoxin system HicA family toxin	A0A0R6PJD4	Moraxella_phage	1.3e-20	71.7
WP_025330120.1\|557504_558029_+\|terminase	terminase small subunit	I6PDJ6	Cronobacter_phage	1.5e-45	62.6
WP_025330121.1\|558021_559365_+\|terminase	PBSX family phage terminase large subunit	A0A191ZDJ9	Acinetobacter_phage	1.0e-154	60.0
WP_025330122.1\|559361_560915_+	DUF1073 domain-containing protein	E2GLW8	Acinetobacter_phage	3.9e-110	48.1
WP_025330123.1\|560865_561669_+	hypothetical protein	A0A0D4DCM6	Acinetobacter_phage	4.9e-56	42.1
WP_025330124.1\|561665_562784_+	DUF2213 domain-containing protein	A0A1X9SFH3	Acinetobacter_phage	1.7e-59	50.4
WP_025330125.1\|562795_563272_+	hypothetical protein	I2GUD6	Acinetobacter_phage	3.7e-27	43.6
WP_025330126.1\|563282_564281_+	DUF2184 domain-containing protein	A0A1V0DZG0	Acinetobacter_phage	7.1e-81	50.2
WP_025330127.1\|564336_564660_+	hypothetical protein	E2GLV1	Acinetobacter_phage	1.3e-07	37.2
WP_025330128.1\|564669_565077_+	DUF4054 domain-containing protein	K4NXG6	Acinetobacter_phage	1.4e-19	42.0
WP_025330129.1\|565078_565660_+	hypothetical protein	A0A1V0DZD6	Acinetobacter_phage	5.7e-14	32.4
WP_025330130.1\|565649_566027_+	hypothetical protein	NA	NA	NA	NA
WP_038648690.1\|566014_566503_+	hypothetical protein	A0A1X9SFG2	Acinetobacter_phage	3.1e-21	39.5
WP_025330132.1\|566511_567978_+	DUF3383 domain-containing protein	E2GLU1	Acinetobacter_phage	1.3e-110	45.2
WP_051506380.1\|568045_568495_+	hypothetical protein	E2GLU0	Acinetobacter_phage	6.1e-32	44.3
WP_025330134.1\|568494_568902_+	hypothetical protein	H9C0W7	Aeromonas_phage	1.6e-18	42.2
WP_025330135.1\|568910_569111_+	hypothetical protein	NA	NA	NA	NA
WP_025330136.1\|569091_571740_+	CHAP domain-containing protein	A0A068CCM7	Acinetobacter_phage	1.2e-103	45.4
WP_025330137.1\|571736_572123_+	hypothetical protein	NA	NA	NA	NA
WP_025330138.1\|572174_573116_+	DUF1311 domain-containing protein	NA	NA	NA	NA
WP_025330139.1\|573337_573964_+	hypothetical protein	A0A1V0DZ59	Acinetobacter_phage	3.4e-49	57.1
WP_025330140.1\|573960_574239_+	hypothetical protein	A0A0D4DC33	Acinetobacter_phage	2.9e-16	44.0
WP_051506381.1\|574228_575125_+	hypothetical protein	A0A1X9SFF0	Acinetobacter_phage	1.4e-80	50.0
WP_025330142.1\|575102_575813_+	hypothetical protein	H9C0X6	Aeromonas_phage	1.6e-34	50.3
WP_025330143.1\|575809_576163_+	hypothetical protein	I2GUF7	Acinetobacter_phage	4.5e-30	53.0
WP_025330144.1\|576159_577356_+\|plate	baseplate J/gp47 family protein	A0A068C8J3	Acinetobacter_phage	1.5e-93	44.3
WP_157785035.1\|577376_577847_+	DUF2612 domain-containing protein	K4HYS2	Acinetobacter_phage	5.4e-39	55.8
WP_080690479.1\|578614_579052_+\|tail	tail fiber protein	A0A193GYM0	Enterobacter_phage	1.8e-36	56.1
WP_025330145.1\|579062_579704_+	hypothetical protein	U5P0S4	Shigella_phage	1.1e-07	32.1
WP_025330146.1\|579748_580225_+	hypothetical protein	NA	NA	NA	NA
WP_025330147.1\|580224_580557_+	hypothetical protein	NA	NA	NA	NA
WP_025330148.1\|580748_581030_+	BrnT family toxin	NA	NA	NA	NA
WP_025330149.1\|581026_581239_+	BrnA antitoxin family protein	NA	NA	NA	NA
WP_051506385.1\|581430_581769_+	hypothetical protein	A0A2H5BHE1	Acinetobacter_phage	1.9e-25	55.3
WP_025330150.1\|581978_582677_-	chromophore lyase	Q7Y5W5	Haemophilus_phage	6.6e-41	49.7

DBSCAN-SWA_4

795421 : 807586

Bacillus_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_025330339.1\|795421_797086_+	AMP-binding protein	A0A2H4PQM9	Staphylococcus_phage	1.5e-38	31.6
WP_025330340.1\|797640_798138_-	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	3.5e-20	40.4
WP_051506406.1\|798134_798833_-	hypothetical protein	NA	NA	NA	NA
WP_025330342.1\|798860_799529_-	O-methyltransferase	NA	NA	NA	NA
WP_025330343.1\|799546_799732_-	DUF3460 family protein	NA	NA	NA	NA
WP_025330344.1\|799936_801271_+	polynucleotide adenylyltransferase PcnB	G3MAR3	Bacillus_virus	1.1e-28	36.3
WP_025330345.1\|801267_801774_+	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	S4VNV0	Pandoravirus	5.1e-11	40.8
WP_025330346.1\|801793_802426_+	deoxynucleoside kinase	S5M586	Bacillus_phage	1.3e-08	23.0
WP_025330348.1\|802974_803766_+	3-methyl-2-oxobutanoate hydroxymethyltransferase	A0A0N7HVJ8	Ostreococcus_lucimarinus_virus	1.6e-35	32.7
WP_025330349.1\|803938_804763_+	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	NA	NA	NA	NA
WP_025330350.1\|804856_805516_+	uracil-DNA glycosylase	A0A0A7D988	Equid_alphaherpesvirus	6.8e-56	49.8
WP_038648748.1\|805588_807586_+	DNA helicase Rep	A7KV33	Bacillus_phage	3.7e-113	37.7

DBSCAN-SWA_5

1018511 : 1103979

Burkholderia_virus(30.77%)

plate,tail,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_158500016.1\|1018511_1020272_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_025330514.1\|1020268_1021231_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_025330515.1\|1021231_1021951_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_051506417.1\|1022079_1022487_+\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_025330517.1\|1022676_1023003_-	hypothetical protein	NA	NA	NA	NA
WP_025330518.1\|1022986_1023289_-	integration host factor subunit alpha	A0A0H3UZA0	Geobacillus_virus	6.2e-12	40.0
WP_025330519.1\|1023392_1025750_-\|tRNA	phenylalanine--tRNA ligase subunit beta	A0A1L3IZU3	BeAn_58058_virus	2.7e-06	26.4
WP_025330520.1\|1026091_1027081_-\|tRNA	phenylalanine--tRNA ligase subunit alpha	A0A2I2L4E3	Orpheovirus	1.3e-31	35.9
WP_025330521.1\|1027356_1027713_-	50S ribosomal protein L20	NA	NA	NA	NA
WP_025330522.1\|1027725_1027923_-	50S ribosomal protein L35	NA	NA	NA	NA
WP_080690443.1\|1028210_1028744_-	translation initiation factor IF-3	A0A2L0UZ54	Agrobacterium_phage	1.6e-10	32.1
WP_025330524.1\|1028751_1030659_-\|tRNA	threonine--tRNA ligase	A0A2K9L297	Tupanvirus	5.8e-124	36.8
WP_025330525.1\|1030900_1032016_+\|tRNA	tRNA guanosine(34) transglycosylase Tgt	A0A1B1IVQ4	uncultured_Mediterranean_phage	2.2e-86	45.8
WP_025330526.1\|1032139_1033522_+	argininosuccinate lyase	NA	NA	NA	NA
WP_025330527.1\|1033693_1034428_-	hypothetical protein	NA	NA	NA	NA
WP_144353285.1\|1035399_1035621_-	hypothetical protein	NA	NA	NA	NA
WP_025330529.1\|1036065_1036743_-	helix-turn-helix transcriptional regulator	H1ZZB6	Pseudomonas_virus	1.4e-19	33.2
WP_025330530.1\|1037388_1038006_-	hypothetical protein	A0A2H4J6J6	uncultured_Caudovirales_phage	1.6e-11	32.0
WP_025330531.1\|1038383_1038812_+	hypothetical protein	NA	NA	NA	NA
WP_051506419.1\|1039303_1039894_-	LexA family transcriptional regulator	Q7Y5W5	Haemophilus_phage	9.5e-17	38.5
WP_025330532.1\|1040256_1041159_+	phage antirepressor N-terminal domain-containing protein	A5VW58	Enterobacteria_phage	1.2e-26	29.2
WP_025330533.1\|1041464_1041953_+	hypothetical protein	NA	NA	NA	NA
WP_025330534.1\|1041956_1042298_+	hypothetical protein	NA	NA	NA	NA
WP_025330535.1\|1042357_1042792_+	M15 family metallopeptidase	A0A2H5BHE1	Acinetobacter_phage	4.4e-43	54.3
WP_025330536.1\|1043892_1044291_+	BPSL0067 family protein	NA	NA	NA	NA
WP_144353286.1\|1044277_1044631_+	hypothetical protein	NA	NA	NA	NA
WP_025330538.1\|1044838_1045195_+	hypothetical protein	NA	NA	NA	NA
WP_051506422.1\|1045231_1045606_+	hypothetical protein	NA	NA	NA	NA
WP_038648803.1\|1045644_1046019_+	hypothetical protein	NA	NA	NA	NA
WP_025330541.1\|1046963_1047461_+	DUF1841 family protein	NA	NA	NA	NA
WP_025330542.1\|1047572_1048028_+	DUF441 domain-containing protein	NA	NA	NA	NA
WP_025330543.1\|1048449_1048956_+	Gp37 family protein	A4JWK3	Burkholderia_virus	4.3e-18	32.6
WP_025330544.1\|1048964_1050368_+\|tail	phage tail sheath subtilisin-like domain-containing protein	A4JWK5	Burkholderia_virus	7.4e-100	45.9
WP_025330545.1\|1050377_1050893_+\|tail	phage major tail tube protein	A4JWK6	Burkholderia_virus	3.7e-41	50.6
WP_025330546.1\|1051014_1051299_+\|tail	phage tail assembly protein	NA	NA	NA	NA
WP_080690445.1\|1051240_1051447_+\|tail	GpE family phage tail protein	NA	NA	NA	NA
WP_025330547.1\|1051613_1054139_+	hypothetical protein	A4JWL0	Burkholderia_virus	1.1e-21	23.8
WP_025330548.1\|1054138_1055035_+\|tail	phage tail protein	A4JWL1	Burkholderia_virus	1.0e-22	40.0
WP_025330549.1\|1055037_1055259_+\|tail	tail protein X	Q6QIA3	Burkholderia_phage	5.0e-11	44.1
WP_025330550.1\|1055246_1056344_+	hypothetical protein	A4JWL3	Burkholderia_virus	1.4e-58	40.3
WP_025330551.1\|1056327_1056957_+\|plate	phage baseplate assembly protein V	A4JWL4	Burkholderia_virus	1.6e-22	39.3
WP_025330552.1\|1057040_1057412_+	GPW/gp25 family protein	NA	NA	NA	NA
WP_025330553.1\|1057408_1058554_+\|plate	baseplate J/gp47 family protein	A4JWL6	Burkholderia_virus	5.5e-61	40.0
WP_025330554.1\|1058546_1059125_+\|tail	phage tail protein	Q6QI98	Burkholderia_phage	4.3e-46	50.8
WP_025330555.1\|1059124_1060330_+	hypothetical protein	R9TNJ7	Vibrio_phage	1.1e-06	43.0
WP_025330556.1\|1060331_1060775_+	hypothetical protein	NA	NA	NA	NA
WP_025330557.1\|1061710_1063033_-	N-acetylmuramoyl-L-alanine amidase	A0A2H4JCM7	uncultured_Caudovirales_phage	1.6e-19	32.6
WP_025330558.1\|1063036_1063507_-\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	NA	NA	NA	NA
WP_038648809.1\|1063742_1064549_+	glutamate racemase	NA	NA	NA	NA
WP_025330560.1\|1064572_1065214_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	8.5e-27	39.0
WP_025330561.1\|1065231_1065906_+	hypothetical protein	NA	NA	NA	NA
WP_025330562.1\|1065915_1067178_+	RsmB/NOP family class I SAM-dependent RNA methyltransferase	NA	NA	NA	NA
WP_025330563.1\|1067200_1067512_+	Grx4 family monothiol glutaredoxin	NA	NA	NA	NA
WP_025330564.1\|1067587_1068220_+	uracil phosphoribosyltransferase	NA	NA	NA	NA
WP_025330565.1\|1068501_1069896_-	two-component sensor histidine kinase	W8CYF6	Bacillus_phage	3.1e-13	25.2
WP_025330566.1\|1069871_1070534_-	response regulator transcription factor	NA	NA	NA	NA
WP_025330567.1\|1070662_1070920_-	hypothetical protein	NA	NA	NA	NA
WP_025330568.1\|1071354_1072644_-	glutamate-1-semialdehyde 2,1-aminomutase	NA	NA	NA	NA
WP_025330569.1\|1073044_1073704_-	YdcF family protein	NA	NA	NA	NA
WP_025330570.1\|1073704_1074061_-	arsenate reductase (glutaredoxin)	NA	NA	NA	NA
WP_051506428.1\|1074329_1074848_+	TlpA family protein disulfide reductase	NA	NA	NA	NA
WP_025330572.1\|1074842_1076381_-	L-aspartate oxidase	NA	NA	NA	NA
WP_080690446.1\|1076352_1077576_-	quinolinate synthase NadA	NA	NA	NA	NA
WP_051506430.1\|1077793_1078753_+	hypothetical protein	NA	NA	NA	NA
WP_025330575.1\|1078968_1079841_+	carboxylating nicotinate-nucleotide diphosphorylase	NA	NA	NA	NA
WP_038648813.1\|1079933_1081331_+	FAD-binding oxidoreductase	NA	NA	NA	NA
WP_025330576.1\|1081439_1082543_-	3-phosphoserine/phosphohydroxythreonine transaminase	M1Q1P2	Streptococcus_phage	7.1e-90	49.3
WP_025330577.1\|1082858_1083674_-	competence/damage-inducible protein A	NA	NA	NA	NA
WP_025330578.1\|1083808_1084627_+	META and DUF4377 domain-containing protein	NA	NA	NA	NA
WP_025330579.1\|1084726_1085155_-	hypothetical protein	NA	NA	NA	NA
WP_025330580.1\|1085260_1085695_-	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA
WP_038649451.1\|1085725_1086061_-	DUF2288 domain-containing protein	NA	NA	NA	NA
WP_099048785.1\|1086140_1087109_-	hypothetical protein	NA	NA	NA	NA
WP_025330583.1\|1087087_1087711_-	hemolysin III family protein	NA	NA	NA	NA
WP_025330584.1\|1087890_1088808_+\|tRNA	glycine--tRNA ligase subunit alpha	NA	NA	NA	NA
WP_025330585.1\|1088831_1090895_+\|tRNA	glycine--tRNA ligase subunit beta	NA	NA	NA	NA
WP_025330586.1\|1090949_1091396_+	hypothetical protein	NA	NA	NA	NA
WP_025330587.1\|1091404_1091980_+	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	NA	NA	NA	NA
WP_025330588.1\|1091986_1092748_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA
WP_025330589.1\|1092945_1093644_+	M48 family metallopeptidase	NA	NA	NA	NA
WP_025330590.1\|1093810_1097221_-	transcription-repair coupling factor	NA	NA	NA	NA
WP_025330591.1\|1097390_1097879_-	DUF456 domain-containing protein	NA	NA	NA	NA
WP_025330592.1\|1098247_1100062_-	translational GTPase TypA	NA	NA	NA	NA
WP_025330593.1\|1100298_1100562_+	DUF1289 domain-containing protein	NA	NA	NA	NA
WP_025330594.1\|1100612_1101488_+	DMT family transporter	NA	NA	NA	NA
WP_025330595.1\|1101542_1102625_-	peptide chain release factor 1	NA	NA	NA	NA
WP_025330596.1\|1102716_1103979_-\|tRNA	glutamyl-tRNA reductase	NA	NA	NA	NA

DBSCAN-SWA_6

2065174 : 2079711

Mannheimia_phage(22.22%)

terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_025331415.1\|2065174_2065630_-	HK97 gp10 family phage protein	A0A0M3LPJ5	Mannheimia_phage	1.3e-13	34.5
WP_025331416.1\|2065626_2065983_-	hypothetical protein	A0A2H4J5T3	uncultured_Caudovirales_phage	4.1e-07	29.1
WP_025331417.1\|2065984_2066395_-	hypothetical protein	NA	NA	NA	NA
WP_025331418.1\|2066375_2066753_-	hypothetical protein	NA	NA	NA	NA
WP_025331419.1\|2066763_2067738_-	hypothetical protein	A0A0M3LQL5	Mannheimia_phage	3.3e-83	52.0
WP_025331420.1\|2067752_2068499_-	hypothetical protein	A0A0M3LQV7	Mannheimia_phage	2.2e-58	49.0
WP_025331421.1\|2068568_2069522_-	hypothetical protein	NA	NA	NA	NA
WP_025331422.1\|2069493_2070900_-	DUF4055 domain-containing protein	A0A0M3LQA1	Mannheimia_phage	8.2e-83	42.9
WP_025331423.1\|2070904_2072191_-\|terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	1.7e-151	62.6
WP_025331424.1\|2072165_2072627_-	helix-turn-helix domain-containing protein	C7U0V7	Enterobacteria_phage	4.6e-35	53.3
WP_080690463.1\|2072650_2073097_-	GNAT family N-acetyltransferase	B5SP24	Lactococcus_phage	6.1e-16	46.7
WP_025331425.1\|2073036_2073720_-	hypothetical protein	B5SP23	Lactococcus_phage	2.3e-54	56.1
WP_025331426.1\|2073698_2074259_-	ParB N-terminal domain-containing protein	A0A2I7RQE2	Vibrio_phage	1.4e-41	60.0
WP_025331427.1\|2074502_2075027_-	hypothetical protein	NA	NA	NA	NA
WP_025331428.1\|2075037_2075331_-	DUF1364 domain-containing protein	H9C174	Pectobacterium_phage	1.6e-28	65.9
WP_025331429.1\|2075333_2075933_-	DUF1367 family protein	I3PV01	Vibrio_phage	1.8e-47	46.2
WP_025331430.1\|2075935_2076283_-	hypothetical protein	A0A2H4J7A6	uncultured_Caudovirales_phage	4.9e-37	61.7
WP_025331431.1\|2076212_2076563_-	hypothetical protein	NA	NA	NA	NA
WP_144353293.1\|2076555_2076816_-	hypothetical protein	NA	NA	NA	NA
WP_025331433.1\|2076830_2077472_-	hypothetical protein	A0A1B0VMD9	Pseudomonas_phage	1.7e-14	27.8
WP_025331434.1\|2077471_2078365_-	helix-turn-helix domain-containing protein	R9TPU9	Vibrio_phage	2.7e-07	36.0
WP_051506482.1\|2078373_2078586_-	helix-turn-helix domain-containing protein	A0A088FAW9	Sulfitobacter_phage	2.0e-09	50.8
WP_025331436.1\|2078595_2078817_-	helix-turn-helix domain-containing protein	A0A1W6JTD1	Pseudomonas_phage	6.3e-06	48.0
WP_025331437.1\|2078976_2079711_+	helix-turn-helix transcriptional regulator	Q7Y5W5	Haemophilus_phage	1.6e-34	43.1

DBSCAN-SWA_7

2084426 : 2092356

Mannheimia_phage(37.5%)

integrase

attL 2088878:2088891|attR 2095281:2095294

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_025331446.1\|2084426_2085338_+	recombination-associated protein RdgC	L7TP07	Pseudomonas_virus	4.4e-45	36.6
WP_025331447.1\|2085563_2085968_+	hypothetical protein	S4TQ39	Salmonella_phage	8.5e-33	50.0
WP_025331448.1\|2085997_2086882_+	recombinase RecT	A0A0M3LNU3	Mannheimia_phage	1.3e-86	56.6
WP_025331449.1\|2086892_2087531_+	translocation protein TolB precursor	A0A0M3LP90	Mannheimia_phage	2.1e-62	57.3
WP_025331450.1\|2087541_2088012_+	single-stranded DNA-binding protein	F8TUL2	EBPR_podovirus	1.7e-32	55.9
WP_025331451.1\|2088070_2088373_+	hypothetical protein	NA	NA	NA	NA
WP_025331452.1\|2088438_2089119_+	hypothetical protein	NA	NA	NA	NA
2088878:2088891	attL	NA	NA	NA	NA
WP_025331453.1\|2089160_2090054_+	site-specific DNA-methyltransferase	E3SLV1	Prochlorococcus_phage	2.4e-72	48.5
WP_025331454.1\|2090076_2090532_+	hypothetical protein	NA	NA	NA	NA
WP_038649024.1\|2090543_2091026_+	class I SAM-dependent methyltransferase	A0A0N7IRF6	Acinetobacter_phage	2.0e-57	64.7
WP_025331456.1\|2091108_2091378_+	hypothetical protein	NA	NA	NA	NA
WP_025331457.1\|2091366_2092356_-\|integrase	site-specific integrase	Q19US1	Mannheimia_phage	2.1e-72	46.8
2095281:2095294	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP007446

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection