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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP007451 Draconibacterium orientale strain Draconibacterium orientale type strain FH5T chromosome, complete genome 9 crisprs DEDDh,RT,csa3,cas3,PrimPol,cas9,cas1,cas2,WYL 2 3 1 0

Results visualization

1. NZ_CP007451
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP007451_1 885975-886106 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP007451_2 1033006-1033192 Orphan NA
4 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP007451_3 1761539-1761625 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP007451_4 2018736-2018903 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP007451_5 2216528-2216608 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP007451_6 2905401-2905501 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP007451_7 3906757-3906831 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP007451_8 4017666-4017964 TypeII NA
4 spacers
cas2,cas1,cas9

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP007451_9 4997634-4997731 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NZ_CP007451_2 2.3|1033111|18|NZ_CP007451|CRT 1033111-1033128 18 NZ_CP007451.1 1032988-1033005 0 1.0
NZ_CP007451_2 2.1|1033029|18|NZ_CP007451|CRT 1033029-1033046 18 NZ_CP007451.1 2253147-2253164 1 0.944

1. spacer 2.3|1033111|18|NZ_CP007451|CRT matches to position: 1032988-1033005, mismatch: 0, identity: 1.0

gttttgtggggaaaacaa	CRISPR spacer
gttttgtggggaaaacaa	Protospacer
******************

2. spacer 2.1|1033029|18|NZ_CP007451|CRT matches to position: 2253147-2253164, mismatch: 1, identity: 0.944

attttgcccgcaaaatgg	CRISPR spacer
attttgcccccaaaatgg	Protospacer
********* ********

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP007451_3 3.1|1761562|41|NZ_CP007451|CRISPRCasFinder 1761562-1761602 41 NZ_CP024285 Escherichia albertii strain 2014C-4356 plasmid unnamed3, complete sequence 46032-46072 6 0.854
NZ_CP007451_3 3.1|1761562|41|NZ_CP007451|CRISPRCasFinder 1761562-1761602 41 NZ_CP024285 Escherichia albertii strain 2014C-4356 plasmid unnamed3, complete sequence 46039-46079 6 0.854
NZ_CP007451_3 3.1|1761562|41|NZ_CP007451|CRISPRCasFinder 1761562-1761602 41 NZ_CP024285 Escherichia albertii strain 2014C-4356 plasmid unnamed3, complete sequence 46046-46086 6 0.854
NZ_CP007451_3 3.1|1761562|41|NZ_CP007451|CRISPRCasFinder 1761562-1761602 41 NZ_CP024285 Escherichia albertii strain 2014C-4356 plasmid unnamed3, complete sequence 46053-46093 6 0.854
NZ_CP007451_3 3.1|1761562|41|NZ_CP007451|CRISPRCasFinder 1761562-1761602 41 CP031286 Escherichia fergusonii strain 40A plasmid p80_40A, complete sequence 58682-58722 6 0.854
NZ_CP007451_3 3.1|1761562|41|NZ_CP007451|CRISPRCasFinder 1761562-1761602 41 CP031286 Escherichia fergusonii strain 40A plasmid p80_40A, complete sequence 58689-58729 6 0.854
NZ_CP007451_3 3.1|1761562|41|NZ_CP007451|CRISPRCasFinder 1761562-1761602 41 CP031286 Escherichia fergusonii strain 40A plasmid p80_40A, complete sequence 58696-58736 6 0.854
NZ_CP007451_3 3.1|1761562|41|NZ_CP007451|CRISPRCasFinder 1761562-1761602 41 CP031283 Escherichia fergusonii strain 40A plasmid p150_40A, complete sequence 147871-147911 6 0.854
NZ_CP007451_3 3.1|1761562|41|NZ_CP007451|CRISPRCasFinder 1761562-1761602 41 CP031283 Escherichia fergusonii strain 40A plasmid p150_40A, complete sequence 147878-147918 6 0.854
NZ_CP007451_3 3.1|1761562|41|NZ_CP007451|CRISPRCasFinder 1761562-1761602 41 NZ_CP040808 Escherichia fergusonii strain EFCF056 plasmid pEF03, complete sequence 51018-51058 6 0.854
NZ_CP007451_3 3.1|1761562|41|NZ_CP007451|CRISPRCasFinder 1761562-1761602 41 NZ_CP040808 Escherichia fergusonii strain EFCF056 plasmid pEF03, complete sequence 51025-51065 6 0.854
NZ_CP007451_3 3.1|1761562|41|NZ_CP007451|CRISPRCasFinder 1761562-1761602 41 NZ_CP040808 Escherichia fergusonii strain EFCF056 plasmid pEF03, complete sequence 51032-51072 6 0.854
NZ_CP007451_3 3.1|1761562|41|NZ_CP007451|CRISPRCasFinder 1761562-1761602 41 NZ_CP040808 Escherichia fergusonii strain EFCF056 plasmid pEF03, complete sequence 51039-51079 6 0.854
NZ_CP007451_8 8.4|4017899|30|NZ_CP007451|CRISPRCasFinder,CRT 4017899-4017928 30 NZ_CP023822 Escherichia coli strain 7/2 plasmid p7_2.2, complete sequence 37077-37106 6 0.8
NZ_CP007451_3 3.1|1761562|41|NZ_CP007451|CRISPRCasFinder 1761562-1761602 41 NZ_CP024285 Escherichia albertii strain 2014C-4356 plasmid unnamed3, complete sequence 46025-46065 7 0.829
NZ_CP007451_3 3.1|1761562|41|NZ_CP007451|CRISPRCasFinder 1761562-1761602 41 CP031286 Escherichia fergusonii strain 40A plasmid p80_40A, complete sequence 58675-58715 7 0.829
NZ_CP007451_3 3.1|1761562|41|NZ_CP007451|CRISPRCasFinder 1761562-1761602 41 CP031283 Escherichia fergusonii strain 40A plasmid p150_40A, complete sequence 147864-147904 7 0.829
NZ_CP007451_3 3.1|1761562|41|NZ_CP007451|CRISPRCasFinder 1761562-1761602 41 NZ_CP040808 Escherichia fergusonii strain EFCF056 plasmid pEF03, complete sequence 51011-51051 7 0.829
NZ_CP007451_8 8.1|4017702|30|NZ_CP007451|CRISPRCasFinder,CRT 4017702-4017731 30 MG945498 UNVERIFIED: Microviridae sp. isolate 1641-180101, complete genome 2527-2556 7 0.767
NZ_CP007451_8 8.1|4017702|30|NZ_CP007451|CRISPRCasFinder,CRT 4017702-4017731 30 NZ_CP031644 Bacillus anthracis strain MCCC 1A01412 plasmid p1, complete sequence 56698-56727 8 0.733
NZ_CP007451_8 8.1|4017702|30|NZ_CP007451|CRISPRCasFinder,CRT 4017702-4017731 30 LT614807 Cronobacter phage Pet-CM3-4 genome assembly, chromosome: I 120783-120812 8 0.733
NZ_CP007451_8 8.4|4017899|30|NZ_CP007451|CRISPRCasFinder,CRT 4017899-4017928 30 NC_015417 Clostridium botulinum BKT015925 plasmid p1BKT015925, complete sequence 112811-112840 8 0.733

1. spacer 3.1|1761562|41|NZ_CP007451|CRISPRCasFinder matches to NZ_CP024285 (Escherichia albertii strain 2014C-4356 plasmid unnamed3, complete sequence) position: , mismatch: 6, identity: 0.854

attggttattgattattggttattgattattgtatctttca-	CRISPR spacer
attgattattgattattgattattgattattg-attattgat	Protospacer
****.*************.************* **. ** * 

2. spacer 3.1|1761562|41|NZ_CP007451|CRISPRCasFinder matches to NZ_CP024285 (Escherichia albertii strain 2014C-4356 plasmid unnamed3, complete sequence) position: , mismatch: 6, identity: 0.854

attggttattgattattggttattgattattgtatctttca-	CRISPR spacer
attgattattgattattgattattgattattg-attattgat	Protospacer
****.*************.************* **. ** * 

3. spacer 3.1|1761562|41|NZ_CP007451|CRISPRCasFinder matches to NZ_CP024285 (Escherichia albertii strain 2014C-4356 plasmid unnamed3, complete sequence) position: , mismatch: 6, identity: 0.854

attggttattgattattggttattgattattgtatctttca-	CRISPR spacer
attgattattgattattgattattgattattg-attattgat	Protospacer
****.*************.************* **. ** * 

4. spacer 3.1|1761562|41|NZ_CP007451|CRISPRCasFinder matches to NZ_CP024285 (Escherichia albertii strain 2014C-4356 plasmid unnamed3, complete sequence) position: , mismatch: 6, identity: 0.854

attggttattgattattggttattgattattgtatctttca-	CRISPR spacer
attgattattgattattgattattgattattg-attattgat	Protospacer
****.*************.************* **. ** * 

5. spacer 3.1|1761562|41|NZ_CP007451|CRISPRCasFinder matches to CP031286 (Escherichia fergusonii strain 40A plasmid p80_40A, complete sequence) position: , mismatch: 6, identity: 0.854

attggttattgattattggttattgattattgtatctttca-	CRISPR spacer
attgattattgattattgattattgattattg-attattgat	Protospacer
****.*************.************* **. ** * 

6. spacer 3.1|1761562|41|NZ_CP007451|CRISPRCasFinder matches to CP031286 (Escherichia fergusonii strain 40A plasmid p80_40A, complete sequence) position: , mismatch: 6, identity: 0.854

attggttattgattattggttattgattattgtatctttca-	CRISPR spacer
attgattattgattattgattattgattattg-attattgat	Protospacer
****.*************.************* **. ** * 

7. spacer 3.1|1761562|41|NZ_CP007451|CRISPRCasFinder matches to CP031286 (Escherichia fergusonii strain 40A plasmid p80_40A, complete sequence) position: , mismatch: 6, identity: 0.854

attggttattgattattggttattgattattgtatctttca-	CRISPR spacer
attgattattgattattgattattgattattg-attattgat	Protospacer
****.*************.************* **. ** * 

8. spacer 3.1|1761562|41|NZ_CP007451|CRISPRCasFinder matches to CP031283 (Escherichia fergusonii strain 40A plasmid p150_40A, complete sequence) position: , mismatch: 6, identity: 0.854

attggttattgattattggttattgattattgtatctttca-	CRISPR spacer
attgattattgattattgattattgattattg-attattgat	Protospacer
****.*************.************* **. ** * 

9. spacer 3.1|1761562|41|NZ_CP007451|CRISPRCasFinder matches to CP031283 (Escherichia fergusonii strain 40A plasmid p150_40A, complete sequence) position: , mismatch: 6, identity: 0.854

attggttattgattattggttattgattattgtatctttca-	CRISPR spacer
attgattattgattattgattattgattattg-attattgat	Protospacer
****.*************.************* **. ** * 

10. spacer 3.1|1761562|41|NZ_CP007451|CRISPRCasFinder matches to NZ_CP040808 (Escherichia fergusonii strain EFCF056 plasmid pEF03, complete sequence) position: , mismatch: 6, identity: 0.854

attggttattgattattggttattgattattgtatctttca-	CRISPR spacer
attgattattgattattgattattgattattg-attattgat	Protospacer
****.*************.************* **. ** * 

11. spacer 3.1|1761562|41|NZ_CP007451|CRISPRCasFinder matches to NZ_CP040808 (Escherichia fergusonii strain EFCF056 plasmid pEF03, complete sequence) position: , mismatch: 6, identity: 0.854

attggttattgattattggttattgattattgtatctttca-	CRISPR spacer
attgattattgattattgattattgattattg-attattgat	Protospacer
****.*************.************* **. ** * 

12. spacer 3.1|1761562|41|NZ_CP007451|CRISPRCasFinder matches to NZ_CP040808 (Escherichia fergusonii strain EFCF056 plasmid pEF03, complete sequence) position: , mismatch: 6, identity: 0.854

attggttattgattattggttattgattattgtatctttca-	CRISPR spacer
attgattattgattattgattattgattattg-attattgat	Protospacer
****.*************.************* **. ** * 

13. spacer 3.1|1761562|41|NZ_CP007451|CRISPRCasFinder matches to NZ_CP040808 (Escherichia fergusonii strain EFCF056 plasmid pEF03, complete sequence) position: , mismatch: 6, identity: 0.854

attggttattgattattggttattgattattgtatctttca-	CRISPR spacer
attgattattgattattgattattgattattg-attattgat	Protospacer
****.*************.************* **. ** * 

14. spacer 8.4|4017899|30|NZ_CP007451|CRISPRCasFinder,CRT matches to NZ_CP023822 (Escherichia coli strain 7/2 plasmid p7_2.2, complete sequence) position: , mismatch: 6, identity: 0.8

tgaaacatcattaatatcgttatgacagaa	CRISPR spacer
agtaacagtattaatatcgttatgacaggt	Protospacer
 * **** .*******************. 

15. spacer 3.1|1761562|41|NZ_CP007451|CRISPRCasFinder matches to NZ_CP024285 (Escherichia albertii strain 2014C-4356 plasmid unnamed3, complete sequence) position: , mismatch: 7, identity: 0.829

attggttattgattattggttattgattattgtatctttca	CRISPR spacer
attgattattgattattgattattgattattgataatatca	Protospacer
****.*************.*************    * ***

16. spacer 3.1|1761562|41|NZ_CP007451|CRISPRCasFinder matches to CP031286 (Escherichia fergusonii strain 40A plasmid p80_40A, complete sequence) position: , mismatch: 7, identity: 0.829

attggttattgattattggttattgattattgtatctttca	CRISPR spacer
attgattattgattattgattattgattattgataatatca	Protospacer
****.*************.*************    * ***

17. spacer 3.1|1761562|41|NZ_CP007451|CRISPRCasFinder matches to CP031283 (Escherichia fergusonii strain 40A plasmid p150_40A, complete sequence) position: , mismatch: 7, identity: 0.829

attggttattgattattggttattgattattgtatctttca	CRISPR spacer
attgattattgattattgattattgattattgataatatca	Protospacer
****.*************.*************    * ***

18. spacer 3.1|1761562|41|NZ_CP007451|CRISPRCasFinder matches to NZ_CP040808 (Escherichia fergusonii strain EFCF056 plasmid pEF03, complete sequence) position: , mismatch: 7, identity: 0.829

attggttattgattattggttattgattattgtatctttca	CRISPR spacer
attgattattgattattgattattgattattgataatatca	Protospacer
****.*************.*************    * ***

19. spacer 8.1|4017702|30|NZ_CP007451|CRISPRCasFinder,CRT matches to MG945498 (UNVERIFIED: Microviridae sp. isolate 1641-180101, complete genome) position: , mismatch: 7, identity: 0.767

gctattgctgattatttcaatccaacttac	CRISPR spacer
aaaggtgctgattatttcaatcctatttac	Protospacer
.  . ****************** *.****

20. spacer 8.1|4017702|30|NZ_CP007451|CRISPRCasFinder,CRT matches to NZ_CP031644 (Bacillus anthracis strain MCCC 1A01412 plasmid p1, complete sequence) position: , mismatch: 8, identity: 0.733

gctattgctgattatttcaatccaacttac	CRISPR spacer
aaaattgctgattatttcaatgtaactaca	Protospacer
.  ****************** .****   

21. spacer 8.1|4017702|30|NZ_CP007451|CRISPRCasFinder,CRT matches to LT614807 (Cronobacter phage Pet-CM3-4 genome assembly, chromosome: I) position: , mismatch: 8, identity: 0.733

gctattgctgattatttcaatccaacttac	CRISPR spacer
gtcattgctgattaattcaatccatccagg	Protospacer
*..*********** ********* *. . 

22. spacer 8.4|4017899|30|NZ_CP007451|CRISPRCasFinder,CRT matches to NC_015417 (Clostridium botulinum BKT015925 plasmid p1BKT015925, complete sequence) position: , mismatch: 8, identity: 0.733

tgaaacatcattaatatcgttatgacagaa	CRISPR spacer
tgaaacatcattaatatttttatttacaag	Protospacer
*****************. ****    .*.

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 3765973 : 3822474 48 Streptococcus_phage(25.0%) integrase,transposase attL 3820079:3820097|attR 3823763:3823781
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage