CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP007474	Ehrlichia sp. HF, complete genome	3 crisprs	cas3	2	1	0	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP007474_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP007474_1

682615-682713

Orphan

Consensus_repeat	Method
AGCCTCCTCTTCTTCAACATAAGCAATATCACT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP007474_1

>merge|NZ_CP007474|1|682615-682713|CRISPRCasFinder
AGCCTCCTCTTCTTCAACATAAGCAATATCACTGATCTCCCCTTCCATTGGTGGAGGTGGAAGAGGAGCCTCTTCTTCTTCAACATAAGCAATATCACT

>NZ_CP007474|1|1|682615-682713|CRISPRCasFinder
AGCCTCCTCTTCTTCAACATAAGCAATATCACT	GATCTCCCCTTCCATTGGTGGAGGTGGAAGAGG
AGCCTCTTCTTCTTCAACATAAGCAATATCACT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP007474.1\|WP_044194927.1\|671632_672478_-\|exodeoxyribonuclease-III	unknown	unknown	gnl\|CDD\|197320
NZ_CP007474.1\|WP_044194939.1\|675954_677136_+\|argininosuccinate-synthase	unknown	unknown	gnl\|CDD\|234785
NZ_CP007474.1\|WP_044194962.1\|691938_692634_-\|DUF3023-domain-containing-protein	unknown	unknown	gnl\|CDD\|288122
NZ_CP007474.1\|WP_052349291.1\|669284_670085_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007474.1\|WP_044194930.1\|672505_673771_-\|bifunctional-glutamate-N-acetyltransferase/amino-acid-acetyltransferase-ArgJ	unknown	unknown	gnl\|CDD\|235441
NZ_CP007474.1\|WP_044194926.1\|670525_671287_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007474.1\|WP_044194950.1\|684520_684982_+\|iron-sulfur-cluster-assembly-accessory-protein	unknown	unknown	gnl\|CDD\|223393
NZ_CP007474.1\|WP_044194955.1\|685711_686218_+\|NADH-quinone-oxidoreductase-subunit-NuoI	unknown	unknown	gnl\|CDD\|235637
NZ_CP007474.1\|WP_044194947.1\|683257_684451_-\|deoxyguanosinetriphosphate-triphosphohydrolase	unknown	unknown	gnl\|CDD\|234934
NZ_CP007474.1\|WP_044194922.1\|664616_667748_-\|bifunctional-proline-dehydrogenase/L-glutamate-gamma-semialdehyde-dehydrogenase-PutA	unknown	unknown	gnl\|CDD\|237017
NZ_CP007474.1\|WP_044194936.1\|675054_675756_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007474.1\|WP_084475733.1\|690789_691254_-\|DUF3023-domain-containing-protein	unknown	unknown	gnl\|CDD\|288122
NZ_CP007474.1\|WP_084475734.1\|691175_691406_-\|DUF3023-domain-containing-protein	unknown	unknown	gnl\|CDD\|288122
NZ_CP007474.1\|WP_044194923.1\|668519_669266_+\|3-oxoacyl-[acyl-carrier-protein]-reductase	unknown	unknown	gnl\|CDD\|273824
NZ_CP007474.1\|WP_052349275.1\|677776_678685_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007474.1\|WP_156928264.1\|691365_691530_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007474.1\|WP_044194934.1\|673978_674671_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007474.1\|WP_044195874.1\|686361_686640_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007474.1\|WP_044194957.1\|686838_688683_-\|translational-GTPase-TypA	unknown	unknown	gnl\|CDD\|224138
NZ_CP007474.1\|WP_044194952.1\|684996_685704_+\|signal-peptidase-I	unknown	unknown	gnl\|CDD\|274044

Protein	Function_ID	Function_description	E-value
NZ_CP007474.1\|WP_044194927.1\|671632_672478_-\|exodeoxyribonuclease-III	gnl\|CDD\|197320	cd09086, ExoIII-like_AP-endo, Escherichia coli exonuclease III (ExoIII) and Neisseria meningitides NExo-like subfamily of the ExoIII family purinic/apyrimidinic (AP) endonucleases. This subfamily includes Escherichia coli ExoIII, Neisseria meningitides NExo,and related proteins. These are ExoIII family AP endonucleases and they belong to the large EEP (exonuclease/endonuclease/phosphatase) superfamily that contains functionally diverse enzymes that share a common catalytic mechanism of cleaving phosphodiester bonds. AP endonucleases participate in the DNA base excision repair (BER) pathway. AP sites are one of the most common lesions in cellular DNA. During BER, the damaged DNA is first recognized by DNA glycosylase. AP endonucleases then catalyze the hydrolytic cleavage of the phosphodiester bond 5' to the AP site, and this is followed by the coordinated actions of DNA polymerase, deoxyribose phosphatase, and DNA ligase. If left unrepaired, AP sites block DNA replication, and have both mutagenic and cytotoxic effects. AP endonucleases can carry out a variety of excision and incision reactions on DNA, including 3'-5' exonuclease, 3'-deoxyribose phosphodiesterase, 3'-phosphatase, and occasionally, nonspecific DNase activities. Different AP endonuclease enzymes catalyze the different reactions with different efficiencies. Many organisms have two AP endonucleases, usually one is the dominant AP endonuclease, the other has weak AP endonuclease activity. For example, Neisseria meningitides Nape and NExo, and exonuclease III (ExoIII) and endonuclease IV (EndoIV) in Escherichia coli. NExo and ExoIII are found in this subfamily. NExo is the non-dominant AP endonuclease. It exhibits strong 3'-5' exonuclease and 3'-deoxyribose phosphodiesterase activities. Escherichia coli ExoIII is an active AP endonuclease, and in addition, it exhibits double strand (ds)-specific 3'-5' exonuclease, exonucleolytic RNase H, 3'-phosphomonoesterase and 3'-phosphodiesterase activities, all catalyzed by a single active site. Class II AP endonucleases have been classified into two families, designated ExoIII and EndoIV, based on their homology to the Escherichia coli enzymes ExoIII and endonuclease IV (EndoIV). This subfamily belongs to the ExoIII family; the EndoIV family belongs to a different superfamily.	8.98668e-125
NZ_CP007474.1\|WP_044194939.1\|675954_677136_+\|argininosuccinate-synthase	gnl\|CDD\|234785	PRK00509, PRK00509, argininosuccinate synthase; Provisional.	0
NZ_CP007474.1\|WP_044194930.1\|672505_673771_-\|bifunctional-glutamate-N-acetyltransferase/amino-acid-acetyltransferase-ArgJ	gnl\|CDD\|235441	PRK05388, argJ, bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ.	0
NZ_CP007474.1\|WP_044194955.1\|685711_686218_+\|NADH-quinone-oxidoreductase-subunit-NuoI	gnl\|CDD\|235637	PRK05888, PRK05888, NADH-quinone oxidoreductase subunit NuoI.	2.77329e-83
NZ_CP007474.1\|WP_044194950.1\|684520_684982_+\|iron-sulfur-cluster-assembly-accessory-protein	gnl\|CDD\|223393	COG0316, sufA, Fe-S cluster assembly scaffold protein [Posttranslational modification, protein turnover, chaperones].	2.04485e-27
NZ_CP007474.1\|WP_044194922.1\|664616_667748_-\|bifunctional-proline-dehydrogenase/L-glutamate-gamma-semialdehyde-dehydrogenase-PutA	gnl\|CDD\|237017	PRK11904, PRK11904, bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA.	0
NZ_CP007474.1\|WP_044194947.1\|683257_684451_-\|deoxyguanosinetriphosphate-triphosphohydrolase	gnl\|CDD\|234934	PRK01286, PRK01286, deoxyguanosinetriphosphate triphosphohydrolase-like protein; Provisional.	3.364e-153
NZ_CP007474.1\|WP_044194957.1\|686838_688683_-\|translational-GTPase-TypA	gnl\|CDD\|224138	COG1217, TypA, Predicted membrane GTPase involved in stress response [Signal transduction mechanisms].	0
NZ_CP007474.1\|WP_084475734.1\|691175_691406_-\|DUF3023-domain-containing-protein	gnl\|CDD\|288122	pfam11224, DUF3023, Protein of unknown function (DUF3023). This bacterial family of proteins with unknown function appear to be restricted to Alphaproteobacteria.	5.52387e-06
NZ_CP007474.1\|WP_044194923.1\|668519_669266_+\|3-oxoacyl-[acyl-carrier-protein]-reductase	gnl\|CDD\|273824	TIGR01830, 3-oxoacyl-_reductase_FabG, 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. [Fatty acid and phospholipid metabolism, Biosynthesis].	1.18629e-113
NZ_CP007474.1\|WP_044194962.1\|691938_692634_-\|DUF3023-domain-containing-protein	gnl\|CDD\|288122	pfam11224, DUF3023, Protein of unknown function (DUF3023). This bacterial family of proteins with unknown function appear to be restricted to Alphaproteobacteria.	1.61924e-26
NZ_CP007474.1\|WP_084475733.1\|690789_691254_-\|DUF3023-domain-containing-protein	gnl\|CDD\|288122	pfam11224, DUF3023, Protein of unknown function (DUF3023). This bacterial family of proteins with unknown function appear to be restricted to Alphaproteobacteria.	4.10283e-10
NZ_CP007474.1\|WP_044194952.1\|684996_685704_+\|signal-peptidase-I	gnl\|CDD\|274044	TIGR02227, Inactive_signal_peptidase_IA., signal peptidase I, bacterial type. This model represents signal peptidase I from most bacteria. Eukaryotic sequences are likely organellar. Several bacteria have multiple paralogs, but these represent isozymes of signal peptidase I. Virtually all known bacteria may be presumed to A related model finds a simlar protein in many archaea and a few bacteria, as well as a microsomal (endoplasmic reticulum) protein in eukaryotes. [Protein fate, Protein and peptide secretion and trafficking].	1.3565e-39

>NZ_CP007474.1|WP_052349275.1|677776_678685_-|hypothetical-protein
MRYSSHAKEELFSKEQIHRWQMAYIVLSVSYLILLTSAFFLILYGPSNIKFLGDYLFLTVAALSFISQFINITCHILNIINVKRELGGKLKSTKDSSVSDVKKQLIVSSGFIGESIGFCCIASILLILGAHLMPFNSIALPMRVFNILASSFSIMYGSILLMRSIQDNAVSKKSNSIGIKLHARWTVLNSIFFLSLGIYNILYETVLYELLDFYSNHNLAMLLKATVFIGYAVVLTSIFFSQVFGPHHAVATEHSNTWTTKEVLEEKAKLNEELRTCNIKPQDLGFIVQTVDNKSDLLLTDL
>NZ_CP007474.1|WP_044194939.1|675954_677136_+|argininosuccinate-synthase
MKKIVLAYSGGLDTSVILRWLQEQYNCEVVVFTADLGQNDDMSAIRQKAISLNVKEIFIEDLKEEFVKDFVFPMFRANTVYEGYYLLGTSIARPLIAKRQIEIAHLTGADAVAHGATGKGNDQIRFEFGYYSCNPNIKVIAPWRQWELTSRTSLVEYAKKHDIDVPLDKASEPPYSIDANLLHTSYEGKSLEDPYVEPDYTMLSRSVIPESASDTPEYIEISFEKGDPYAINNVPLSPANLLKQLNTIGGKHGIGIIDIVENRYVGIKSRGVYETPGGTILLHAHRAIESITLDREAAHLKDEIMPKYAKLIYNGYWWTTERQMLQALIDKSQEKVNGVVRLKLYKGSVMIVGRKSKNSLYSHDLASFDASENYNHGDAEGFIKISSLRLRNS
>NZ_CP007474.1|WP_044194936.1|675054_675756_-|hypothetical-protein
MKIILYLKIILLVLICLKCNEVIAKDIVGSSIGNFYIGGSYGYDKKILEFKIGDGYLDFDFSVNNVIGYNVELSLGYICPSASSNNFRTDLEFVYITKKKVLNEQKILNQDNEESLKKKMLYWNSNKYKIFFNLYYDVGNFFSIRDLTFFFGSGIDIHYLIDWFSKSSESLDLKNKLMIQNIVGIKYQLLRNIAMYSGYRYFIGYEKPRDGVNLKHCCILGSYGLMFGLEFIF
>NZ_CP007474.1|WP_044194934.1|673978_674671_-|hypothetical-protein
MKNYIYAIICFAVITFSFDAIANHFYLTGGYNFLGDYSDSFKSEYIDYQHLNIDISTAIGYKLNNNFFYEFKIRYANIKPAIQKLMDFEKMDLIDILQRIIGRKLYTSKIENIFEINSVTTLVNSGYDYVISNKLMAYLSCGIGIAGLLNYQGFRSNALTHYGMSVQSEVGLCYIDKKKVSLCIGYSYLRNYWKYDTNKIYDEDGNTVMYHFQDFQLNSHVVFVDFKIML
>NZ_CP007474.1|WP_044194930.1|672505_673771_-|bifunctional-glutamate-N-acetyltransferase/amino-acid-acetyltransferase-ArgJ
MVKNFSKNLSRFLLSPLAPTDFPVMPEIDGIELYSFACGIRKTLDGLDLLIVKMPINTSVGGVFTTSYTASSNVEHCRKILPYGKARILIVNSGNANVAVGIGGYKVVEEVTRLCAERFGCSTQEVYFCSTGVIGIPLPVDKIKSVILDPTWSSAKNSWEDAANSITTTDTFIKMVTKEVLICGEKVTINGICKGSGMIAPNMATMLAYVFTDANIKSDVLQKLLREYVDVSFNNITVDGDTSTSDSVLIFATNLAKHEQVCSVDDQVIDDFKIALRDMLVEMAHLIVRDGEGVEKFITINIKNAISLNSARKLGFSVANSLLVKTAIAGGDANWGRIIMAIGKAGEPFNKNEISLKIGDNVVLVDGEISSTYNKVAVNQYVKDEQNIYIEVDINTGNFDATIWTCDLTHRFVDINSKYLT
>NZ_CP007474.1|WP_044194927.1|671632_672478_-|exodeoxyribonuclease-III
MNLKIATWNVNSVRKRLDHLCSWLVEYDIDIALLQEIKCTNEQFPFSNVESLGYRCYVHGQKARNGVAIITRYPIVGELVTSIFLSDYESSLCHKLSSEGFIYNYRESRYLECVILCNNVKVCVASVYVPNGQSIDSDAFQYKLGFFDQLREHMFSLLKQEDILILGGDYNVGPYPIDVYAPEIMDGRLCFHKSEREKFRSILNLGFTDAFRILNEYEQKFTWWNYKAGAWQENKGLRIDHLLLSPQAVDKLLSCVIHDKLRGLDIPSDHAPVVCSIDLNS
>NZ_CP007474.1|WP_044194926.1|670525_671287_+|hypothetical-protein
MTQNKTLSYTKIHLIAMIIILSLWNVFFIIKLIPIIPKDVKNLIFSYTAILSISSILLYGINIIYNLNITLKNYKKKSAKKILFSYLGFIGEAASLLGLNIISTITILIFPINKPIAIAASILNILSSLFVIEYASILLDTNIKQYKELKNTNTSTKYTIWSMVNWSAALIISIANVSFTSVSYFIKHNGTDIFKILLFSVYISIITSMVLMKTMQENDPSISLNLQVEAIKSNIAEERQHLTKYQESCEYSR
>NZ_CP007474.1|WP_052349291.1|669284_670085_+|hypothetical-protein
MFFFKKATHKTKFYIALCANVIYFGVFLFAIFIQLIRFPSKLSVKDLLLINLLMVLSARIMLCLLSYYELACTHYTDDKNSLMKYKKVAHTTEAISTTIAIIIQVIAIYQVAAGNLEIVSSKKTAIHTKGAVDFACILIKLLIVSPLLIYFNYHRMNKNKHITHTKNMEYLFYLSLVSLVISFIAFAGKIINVLEQTQYFTLFDTENHSNNGPNNFPLGPIIRISCIAASIILFTIMFSIESSINSTLSDTEIQYEHKTLNNTVSG
>NZ_CP007474.1|WP_044194923.1|668519_669266_+|3-oxoacyl-[acyl-carrier-protein]-reductase
MFNLSQKRFLITGASGGIGKAITKTLSDAGATLCISGTKESVLQEIAKQSSSADSIIHTLPCDLTNNEQINGLVDNACKIMSGIDGIVCNAGITLDKLTLRTSDEDWHKVINTNLTTTFKLNRNACRSMLKNNQGRIINISSIIAFTGNPGQTSYAASKAAMIAMSKSIAKEFASKNITVNCIAPGFIATPMTDVLSEEQRNNIIANIPMKRVGTPEEVAAAVLFLASDESRYITGQTLHVNGGMLMY
>NZ_CP007474.1|WP_044194922.1|664616_667748_-|bifunctional-proline-dehydrogenase/L-glutamate-gamma-semialdehyde-dehydrogenase-PutA
MISALQAPNEIRKRMQMLYRTEENSYTRYLTEKTEISQDSKIRIYSVAKQIIERIRVDRNLGIIDAFMQEYGLSNEEGIALMCLAESLLRIPDDCTINDLIKDKIGNSMWSNHIGSSSSIFVNAATWGLVIGGKVLKDSSDSTRLFGTINNLLKTMGEPIIRKAVQQAMCILGKHFIKGRDIIEALNNRKAGELYSFDILGEAAKTRKDAERYFTEYMAAVESIGKSKIVNGTGNLIDYDEISVKISALHSRYEFSQIDEVLDEIVDKLLQICRLAKEHNIRVCIDAEEASRLEISLMILEKLRFDSSLNGWEGLGLAVQAYQKRAFSVLDFVEDISVRSHHKMMLRLVKGAYWDYEIKNAQELGLSSYPVFTRKVYTDVSYLACTSKILSKPNTFSPCFATHNAYTLAAILEMANKDHPGFEFQRLHGMGNSLYEYVTQELAANVKCRVYAPVGSYQDLLPYLIRRLLENGANSSFINQLNDSSISLEQLIEDPLEKAKEFEYLPHPNIPLPKEIFGPDRLNSMGIDITDSVTLASFNEEMKNYQTCKFRAAPIIGGEEPDGNFIEVFSPTNSEDLIGEVLFADSAQALSALDIAYDAFKDWSNIPVSTRAAILEKAANLLEENKPKLITLLIREGGKVISDAIAEVREAVDFLRYYALLGRQELEQSKKLPGPVGEDNYLYFRSRGVFMCISPWNFPLAIFIGPIAAALVTGNTVLAKPAEQTSIIAYETVKLLYDAGVPKEVLHLLLGSGKELGEVLLKNEKIGGVAFTGSTETASIINQSIAQKEGGIIPFIAETGGLNTMITDTSALIEQVTNDVITSAFKSAGQRCSALRVLFVQEEMADKQIEMICGAMESLVIGDPMLLKTDIGPVIDKASQEMLMSHESKMSQEAKLLCKVKLGEDCKKGYFFAPCAYEIQSISQLKREVFGPILHIIRYKKENLHKILNEINSTGYGLTFAVQSRVQSNIDNIIDKINVGNVYVNRNQVGAVVGVQPFGGQGLSGTGPKAGGPYYLHRFLTEKVVSINTTALGGNTTLMCLTD
>NZ_CP007474.1|WP_044194947.1|683257_684451_-|deoxyguanosinetriphosphate-triphosphohydrolase
MLDLVKYACNPTKTKGRVFHEEEDQYCSCYQRDRNRIMYSGAFRKLQYKTQVFINYENDYYRTRLTHSLEVSQIARLLSRKLRFNEDLTEAISLAHDLGHPPFGHAGEDALNEMAMHHLGFDHNIQALRILTLLEKRYIKFDGMNLTWETLEGVAKHNGPITGKNRVNSSKKIHKLMLDYDSYYKLDLENFSSAEAQIAAISDDIAYNMHDIDDGIRAKILVIEELLELPLIGGVLKKVIDDNFGLNVSDNRIIHEFLRKTVDIMIADIISQVINNIKEYDISSQDDIRKLGKALVHFSEEMNQYKIGLQNFLRTKLYNYYKVKRVKNKVKRIIRELFQVFYDDPQILPSDWAMKAMDSNLMDRSIVICDFISGMTDRFAIQEHRKIFDATYEMLAF
>NZ_CP007474.1|WP_044194950.1|684520_684982_+|iron-sulfur-cluster-assembly-accessory-protein
MSNLKSADLTLTENAVNKIKHLINQEEDAGSLLCLSVSGGGCSGFQYNFNIGNINTLLANDEDDEDDEDDDYDFLDEDDEEYDDEDELEGGSSAKFTVFDEETGKPLLLIDKASNDLLKHSTIDYIEDINGSRFIVNNPIVKSKCGCGNSFSI
>NZ_CP007474.1|WP_044194952.1|684996_685704_+|signal-peptidase-I
MKKRYSFFKLSSTIFLALVAALLLRVFLFEPFHIPSGSMKSTLLVGDYIFISKYSYGYSRHSIPFSPPIINGRIFARLPKAGDVVVFRPPKELNLHYIKRVIGVPGDKIQLIDGFLYINGQKMKYEKLGDFIDDDGKVITRYLETLYNGNAHEVLDEVPDSPLDNTPVYNVPKGHVFVLGDNRDNSRDSRFITDVGYIPLENIVGKAHVVALSFKKSDTVLPFTVRLNRIWHTIN
>NZ_CP007474.1|WP_044194955.1|685711_686218_+|NADH-quinone-oxidoreductase-subunit-NuoI
MIYKKKNPRLLIINLIRSLFINCKGMYITLRYMFKPKVTLNYPLEKGPLSTRFRGEHVLRKYKNGEERCIACKLCEAICPAQAITIEAQERDDGSRRAVRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEYATETREELMYNKSKLLHNGQVWEEAIDLRIKKNSQFY
>NZ_CP007474.1|WP_044195874.1|686361_686640_-|hypothetical-protein
MFILHDIVEIKLQILNVIGIQIEYLKQLDFSTVKDLQYIEQELVDLLDYKCNTIKSDISVILSCNNHDIIELLNNVYLNYKRALKIRNELLV
>NZ_CP007474.1|WP_044194957.1|686838_688683_-|translational-GTPase-TypA
MLSQGDYQSICNLAIIAHVDHGKTTLLDGMLKQSGTFRENQDIAERVMDNNDLERERGITILAKCTSVIWQGKKINIIDTPGHADFGGEVERVLSMADGVLLLVDASEGPMPQTKFVLSKALKAGLLPIVIINKVDRPDSRIDEVLDEVYELFINLDATNEQLDFPILYASGRNGWCVKNLSDNRESLVPLFEAIVQHVKPVSYDADAPFSMLLTLLESDKFLGRMLTGKIYTGTARVNDSVKVLNLSGEVVEYGKLTKLLAFSGLKRISIKEAKAGDIIAVAGLEKASVSDSILDNSINFPIRSTPVDPPTMAVTIGVNDSPFAGTEGVKLTSTVIKTRLIAEAETNVAITVKETEQGDAYEVGGRGELQLGVLIETMRREGFEVSVSRPRVLLKQDEKGQVLEPIEEVVIDVDEAYSGVVMEKLSFRKGDMQDLRPSGKDRVRMIFLVPSRGLIGYQGEFLTDSHGTGIINRLFHSYAPHRGHIPTRNNGVLISTDKGDAVAYAIFNLQDRGVMFIKPQDKVYCGMIVGLHNRENDIDVNVLKGKQLTNIRAAGSDEAIRLVPPKIMTLEEMIAFINDDELVECTPKSIRLRKKYLDPNERKRASRASKNII
>NZ_CP007474.1|WP_084475733.1|690789_691254_-|DUF3023-domain-containing-protein
MWGPLTRSVPFHLYFQVNAFNLPGFMSEVCSALVDDRDFFKQKGPTFFNLSHYGYFVLSSIPGGPNDQDFDAYYELANTAELDADFSVDKKKHDDSSCCQSYFPKSKKESQKDMGDDDEKEDAKLGLMTVLMDTDHDLQSAIASQLHSEESRRA
>NZ_CP007474.1|WP_084475734.1|691175_691406_-|DUF3023-domain-containing-protein
MVGCGYVLLKIKDNKWLTAPGTGDTLFLLKGYIPSEAVRRGPELRKLVGREYGGHLLVLYHSICTFKLTHSIFLDL
>NZ_CP007474.1|WP_156928264.1|691365_691530_-|hypothetical-protein
MLGSKCLERKKQYNSLLCEKLSSFNSGLKLKSACVIGSSGPNGRLRVRVAQNQG
>NZ_CP007474.1|WP_044194962.1|691938_692634_-|DUF3023-domain-containing-protein
MFGDDQLKGRIEYNNRLCQKLLEEDILHLRAVYPIGSTDSTGQMVVQTTKSHRDKQLPLPTTNGEENLFLLKCRLPADTVREDKELCDLVGGIPKALTSHYSIDIYFLTQWYTEEFLEHVSCNLSLGKIKFKGLGEYGICVLARVRGGPYCNVFCEKEDLKNVAGLDVLCLSSEDYREYTATKGQQTVSSERDDISSESGDVEQVRIDVMTQLMNLSVEHVESNIQQGPGT

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Crispr_ID: NZ_CP007474_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP007474_2

696359-696443

Orphan

Consensus_repeat	Method
GTTTTTATCACCTAACATAACCTTATTGTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP007474_2

>merge|NZ_CP007474|2|696359-696443|CRISPRCasFinder
GTTTTTATCACCTAACATAACCTTATTGTTGTAAATTAGATTCTACAAATCTTACGTTTTTATCACCTAACATAACCTTATTGTT

>NZ_CP007474|2|2|696359-696443|CRISPRCasFinder
GTTTTTATCACCTAACATAACCTTATTGTT	GTAAATTAGATTCTACAAATCTTAC
GTTTTTATCACCTAACATAACCTTATTGTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP007474.1\|WP_052349276.1\|711228_711489_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007474.1\|WP_044194952.1\|684996_685704_+\|signal-peptidase-I	unknown	unknown	gnl\|CDD\|274044
NZ_CP007474.1\|WP_044194993.1\|709496_709754_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007474.1\|WP_044194964.1\|693684_694539_-\|DUF3023-domain-containing-protein	unknown	unknown	gnl\|CDD\|288122
NZ_CP007474.1\|WP_084475735.1\|694687_695320_-\|hydroxymethylbilane-synthase	unknown	unknown	gnl\|CDD\|234612
NZ_CP007474.1\|WP_044194996.1\|710182_710764_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007474.1\|WP_044194955.1\|685711_686218_+\|NADH-quinone-oxidoreductase-subunit-NuoI	unknown	unknown	gnl\|CDD\|235637
NZ_CP007474.1\|WP_044194974.1\|700305_701769_+\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatA	unknown	unknown	gnl\|CDD\|234572
NZ_CP007474.1\|WP_156928265.1\|702868_703970_+\|peptide-chain-release-factor-2	unknown	unknown	gnl\|CDD\|234799
NZ_CP007474.1\|WP_044194982.1\|704079_704412_-\|DUF721-domain-containing-protein	unknown	unknown	gnl\|CDD\|377496
NZ_CP007474.1\|WP_084475733.1\|690789_691254_-\|DUF3023-domain-containing-protein	unknown	unknown	gnl\|CDD\|288122
NZ_CP007474.1\|WP_044194968.1\|696580_697477_-\|hydroxymethylbilane-synthase	unknown	unknown	gnl\|CDD\|234612
NZ_CP007474.1\|WP_044194986.1\|704468_705989_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007474.1\|WP_044194971.1\|698579_699875_-\|bifunctional-folylpolyglutamate-synthase/dihydrofolate-synthase	unknown	unknown	gnl\|CDD\|223362
NZ_CP007474.1\|WP_044195874.1\|686361_686640_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007474.1\|WP_044194962.1\|691938_692634_-\|DUF3023-domain-containing-protein	unknown	unknown	gnl\|CDD\|288122
NZ_CP007474.1\|WP_084475734.1\|691175_691406_-\|DUF3023-domain-containing-protein	unknown	unknown	gnl\|CDD\|288122
NZ_CP007474.1\|WP_044194977.1\|701778_702522_+\|YebC/PmpR-family-DNA-binding-transcriptional-regulator	unknown	unknown	gnl\|CDD\|234640
NZ_CP007474.1\|WP_044194957.1\|686838_688683_-\|translational-GTPase-TypA	unknown	unknown	gnl\|CDD\|224138
NZ_CP007474.1\|WP_156928264.1\|691365_691530_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP007474.1\|WP_084475733.1\|690789_691254_-\|DUF3023-domain-containing-protein	gnl\|CDD\|288122	pfam11224, DUF3023, Protein of unknown function (DUF3023). This bacterial family of proteins with unknown function appear to be restricted to Alphaproteobacteria.	4.10283e-10
NZ_CP007474.1\|WP_044194952.1\|684996_685704_+\|signal-peptidase-I	gnl\|CDD\|274044	TIGR02227, Inactive_signal_peptidase_IA., signal peptidase I, bacterial type. This model represents signal peptidase I from most bacteria. Eukaryotic sequences are likely organellar. Several bacteria have multiple paralogs, but these represent isozymes of signal peptidase I. Virtually all known bacteria may be presumed to A related model finds a simlar protein in many archaea and a few bacteria, as well as a microsomal (endoplasmic reticulum) protein in eukaryotes. [Protein fate, Protein and peptide secretion and trafficking].	1.3565e-39
NZ_CP007474.1\|WP_044194964.1\|693684_694539_-\|DUF3023-domain-containing-protein	gnl\|CDD\|288122	pfam11224, DUF3023, Protein of unknown function (DUF3023). This bacterial family of proteins with unknown function appear to be restricted to Alphaproteobacteria.	5.56482e-08
NZ_CP007474.1\|WP_084475735.1\|694687_695320_-\|hydroxymethylbilane-synthase	gnl\|CDD\|234612	PRK00072, hemC, porphobilinogen deaminase; Reviewed.	2.66873e-86
NZ_CP007474.1\|WP_044194955.1\|685711_686218_+\|NADH-quinone-oxidoreductase-subunit-NuoI	gnl\|CDD\|235637	PRK05888, PRK05888, NADH-quinone oxidoreductase subunit NuoI.	2.77329e-83
NZ_CP007474.1\|WP_044194974.1\|700305_701769_+\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatA	gnl\|CDD\|234572	PRK00012, gatA, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA.	0
NZ_CP007474.1\|WP_044194982.1\|704079_704412_-\|DUF721-domain-containing-protein	gnl\|CDD\|377496	pfam05258, DUF721, Protein of unknown function (DUF721). This family contains several actinomycete proteins of unknown function.	1.53073e-14
NZ_CP007474.1\|WP_084475734.1\|691175_691406_-\|DUF3023-domain-containing-protein	gnl\|CDD\|288122	pfam11224, DUF3023, Protein of unknown function (DUF3023). This bacterial family of proteins with unknown function appear to be restricted to Alphaproteobacteria.	5.52387e-06
NZ_CP007474.1\|WP_044194968.1\|696580_697477_-\|hydroxymethylbilane-synthase	gnl\|CDD\|234612	PRK00072, hemC, porphobilinogen deaminase; Reviewed.	1.71189e-146
NZ_CP007474.1\|WP_044194971.1\|698579_699875_-\|bifunctional-folylpolyglutamate-synthase/dihydrofolate-synthase	gnl\|CDD\|223362	COG0285, FolC, Folylpolyglutamate synthase [Coenzyme metabolism].	3.61578e-131
NZ_CP007474.1\|WP_044194977.1\|701778_702522_+\|YebC/PmpR-family-DNA-binding-transcriptional-regulator	gnl\|CDD\|234640	PRK00110, PRK00110, YebC/PmpR family DNA-binding transcriptional regulator.	1.05377e-121
NZ_CP007474.1\|WP_044194962.1\|691938_692634_-\|DUF3023-domain-containing-protein	gnl\|CDD\|288122	pfam11224, DUF3023, Protein of unknown function (DUF3023). This bacterial family of proteins with unknown function appear to be restricted to Alphaproteobacteria.	1.61924e-26
NZ_CP007474.1\|WP_156928265.1\|702868_703970_+\|peptide-chain-release-factor-2	gnl\|CDD\|234799	PRK00578, prfB, peptide chain release factor 2; Validated.	0
NZ_CP007474.1\|WP_044194957.1\|686838_688683_-\|translational-GTPase-TypA	gnl\|CDD\|224138	COG1217, TypA, Predicted membrane GTPase involved in stress response [Signal transduction mechanisms].	0

>NZ_CP007474.1|WP_084475735.1|694687_695320_-|hydroxymethylbilane-synthase
MYDCHCILKHSSPCDVFISSKYQDIKSLPLSATVDTSSVRRKVQLNYLRPDLQIVPIRGNIDTRILKSNIGECDGVVLAEAGLIRINRCDVIKEVLDPKIMLSAVGQGAIGVQCRANDYNIIEKIKVLNCHKSYVCIMAERSFLRTINGSCDTPLAALAQYVDNDTVYMSCMLSSEKNMVFSNCYFKECDAEKSGIDIGNELIDKLSKHY
>NZ_CP007474.1|WP_044194964.1|693684_694539_-|DUF3023-domain-containing-protein
MLGDKNVRFVESNLQHLREQNLKICREIRRLPYLLMRKCHLIGATRPNGDFQVKVSKTHLDVDVFSSRGLGQRDNTLSQEQMMGIFPVSESEIPNILPLVAGKSLWMVKCKLSREMLQKNSTLKDLICSSRMTDDIKITLYCFINPEHSQFFFKEVHSKSLGPEFKTIPNFLQRAQLLYVRVRGTQEDKEFCELHVLKDIVNLKADFFVRDERKVFGEKKWWVVRSMSCSDNPPLGAEGEVSRSKEKTGRQQAAIVVAGLQNLSVCLESAISKDEDLSRSSSRK
>NZ_CP007474.1|WP_044194962.1|691938_692634_-|DUF3023-domain-containing-protein
MFGDDQLKGRIEYNNRLCQKLLEEDILHLRAVYPIGSTDSTGQMVVQTTKSHRDKQLPLPTTNGEENLFLLKCRLPADTVREDKELCDLVGGIPKALTSHYSIDIYFLTQWYTEEFLEHVSCNLSLGKIKFKGLGEYGICVLARVRGGPYCNVFCEKEDLKNVAGLDVLCLSSEDYREYTATKGQQTVSSERDDISSESGDVEQVRIDVMTQLMNLSVEHVESNIQQGPGT
>NZ_CP007474.1|WP_156928264.1|691365_691530_-|hypothetical-protein
MLGSKCLERKKQYNSLLCEKLSSFNSGLKLKSACVIGSSGPNGRLRVRVAQNQG
>NZ_CP007474.1|WP_084475734.1|691175_691406_-|DUF3023-domain-containing-protein
MVGCGYVLLKIKDNKWLTAPGTGDTLFLLKGYIPSEAVRRGPELRKLVGREYGGHLLVLYHSICTFKLTHSIFLDL
>NZ_CP007474.1|WP_084475733.1|690789_691254_-|DUF3023-domain-containing-protein
MWGPLTRSVPFHLYFQVNAFNLPGFMSEVCSALVDDRDFFKQKGPTFFNLSHYGYFVLSSIPGGPNDQDFDAYYELANTAELDADFSVDKKKHDDSSCCQSYFPKSKKESQKDMGDDDEKEDAKLGLMTVLMDTDHDLQSAIASQLHSEESRRA
>NZ_CP007474.1|WP_044194957.1|686838_688683_-|translational-GTPase-TypA
MLSQGDYQSICNLAIIAHVDHGKTTLLDGMLKQSGTFRENQDIAERVMDNNDLERERGITILAKCTSVIWQGKKINIIDTPGHADFGGEVERVLSMADGVLLLVDASEGPMPQTKFVLSKALKAGLLPIVIINKVDRPDSRIDEVLDEVYELFINLDATNEQLDFPILYASGRNGWCVKNLSDNRESLVPLFEAIVQHVKPVSYDADAPFSMLLTLLESDKFLGRMLTGKIYTGTARVNDSVKVLNLSGEVVEYGKLTKLLAFSGLKRISIKEAKAGDIIAVAGLEKASVSDSILDNSINFPIRSTPVDPPTMAVTIGVNDSPFAGTEGVKLTSTVIKTRLIAEAETNVAITVKETEQGDAYEVGGRGELQLGVLIETMRREGFEVSVSRPRVLLKQDEKGQVLEPIEEVVIDVDEAYSGVVMEKLSFRKGDMQDLRPSGKDRVRMIFLVPSRGLIGYQGEFLTDSHGTGIINRLFHSYAPHRGHIPTRNNGVLISTDKGDAVAYAIFNLQDRGVMFIKPQDKVYCGMIVGLHNRENDIDVNVLKGKQLTNIRAAGSDEAIRLVPPKIMTLEEMIAFINDDELVECTPKSIRLRKKYLDPNERKRASRASKNII
>NZ_CP007474.1|WP_044195874.1|686361_686640_-|hypothetical-protein
MFILHDIVEIKLQILNVIGIQIEYLKQLDFSTVKDLQYIEQELVDLLDYKCNTIKSDISVILSCNNHDIIELLNNVYLNYKRALKIRNELLV
>NZ_CP007474.1|WP_044194955.1|685711_686218_+|NADH-quinone-oxidoreductase-subunit-NuoI
MIYKKKNPRLLIINLIRSLFINCKGMYITLRYMFKPKVTLNYPLEKGPLSTRFRGEHVLRKYKNGEERCIACKLCEAICPAQAITIEAQERDDGSRRAVRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEYATETREELMYNKSKLLHNGQVWEEAIDLRIKKNSQFY
>NZ_CP007474.1|WP_044194952.1|684996_685704_+|signal-peptidase-I
MKKRYSFFKLSSTIFLALVAALLLRVFLFEPFHIPSGSMKSTLLVGDYIFISKYSYGYSRHSIPFSPPIINGRIFARLPKAGDVVVFRPPKELNLHYIKRVIGVPGDKIQLIDGFLYINGQKMKYEKLGDFIDDDGKVITRYLETLYNGNAHEVLDEVPDSPLDNTPVYNVPKGHVFVLGDNRDNSRDSRFITDVGYIPLENIVGKAHVVALSFKKSDTVLPFTVRLNRIWHTIN
>NZ_CP007474.1|WP_044194968.1|696580_697477_-|hydroxymethylbilane-synthase
MNIRIGTRGSILAIAQTLEVKNLLNKYFPEINIQIVKIKTSGDINDKVRLNTIGGKGLFIKEIEEALLAGEVDLAVHSVKDIPAFYCEGLIISCILKRSSPCDVFISSKYQDIKSLPLNATVGTSSVRRKVQLNYLRPDLQIVPIRGNIDTRILKSNIGECDGVVLAEAGLIRINRCDVIKEVLDPKIMLSAVGQGAIGVQCRANDYNIIEKIKVLNCHKSYVCIMAERSFLRTINGSCDTPLAALAQYVDNDTVYMSCMLSSEKNMVFSNCYFKECDAEKSGIDIGNELIDKLSKHY
>NZ_CP007474.1|WP_044194971.1|698579_699875_-|bifunctional-folylpolyglutamate-synthase/dihydrofolate-synthase
MVYMPHWPKPLGFRPSDMVLDRIKQVLNNLGNPEKKLPPVVHVAGTNGKGSTIAFMRYILNAAGLKTHVYTSPHLIEFNERAIVAGKKISDKYLYEVLEICRGASVGIPLTFFEGTTAAILLAFSEVKADIVLLETGMGGRLDATNVVHPILNIITAISLEHTEVLGDTVELIAAEKAGIMKENVTCVIAPQDQGSIMKVFEYYAIKNSVPLYRGGIDWFCKKRGDNMLFKTNVNELFFPLPSLQGEHQIINAGNAIAACSILSGKFGYNIDYENIVQGIIQAYWPARLERINTGFLSTMIPQLWQLFLDGAHNPAGAEMLSHWIQNNELGDLYIIIGMTREKDSVVFLSYLKPHIKFLSSICVKSEPRAQTAEELLQTALSLGIKAVASETLVDAISKILQVGNHNKKSTILICGSLFLAGDVLLENGIK
>NZ_CP007474.1|WP_044194974.1|700305_701769_+|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatA
MKDILKLSIAEMHDKLKKREFSAVELTKFHIEAVNNEKLNAFVTKTPEIALSAAEKADYILTHQKEKLTPLTGIPVGIKDLFCTKNIRTTACSNILKNFTPQYDSTVTKQLLNNGAVMLGKLNMDEFAMGSSNSNSCFGHVKNPWIRADGVEVVPGGSSGGSSAAVAGFLCAGALGSDTGGSVRQPAAFCGIVGLKPTYGRCSRFGMIAFASSLDQAGVLTRTVEDSALMLQSICGYDTQDSTSANIPVPKFSESITYKIKGKRIGIPKEYELSGKYQEYTEISEMWSKGIQYLKDEGAEIIEISLPHTSYALPVYYIICSAEASSNLARYDGIRYGTRIPSDDINEMYDLTRGYNFGTEVKRRILIGAYVLSSGYYDAYYNKAQRIRHLVTNDFIESFKKIDYILTPTTPKEAFAINEQFDTLTMYLNDVFTVPASLAGLPAISVPIGLSKNNLPLSLQIIGNYYDEGGILNVASIIEKHTGKILK
>NZ_CP007474.1|WP_044194977.1|701778_702522_+|YebC/PmpR-family-DNA-binding-transcriptional-regulator
MAGHSQFANIKHRKGAQDAKRAQRFTKLTREIIVAAKQGLPDPEFNSRLRSAIIAAKKENLPKDKIDAAIKSATGNTQNDNYEEVVYEGYGPGNIALMIQTLTNNRNRTAAELRHALSKYNGKLGESGSVSFLFNHVGVIAYKASSIDSFDSLFDTAIELQALDVEEIIQDDTQDKMYYVICNVQDFGNVRDHLFHKFADAEFSRLFWKSSDILKIEDEEIQRKILSLMDLLENNDDVQYIDSNFTF
>NZ_CP007474.1|WP_156928265.1|702868_703970_+|peptide-chain-release-factor-2
MITKSYADEELVSLGKALQLIRGYLDIDNLTNSLADLSVQCSSTSLWNDNSLAQRILSERARISKTLNSFTELEEEYNYYHELLTIVKNDSDELLNELEVGLTKLKEKIQKKEIECLFSNEADHNDCFIEIQSGAGGTESNDWSSMLLRMYVRWAEIYHNFKTEIVYKLDGEEAGLKSAIIKVTGDNAYGWTKTESGIHRLVRISPFNSNAKRHTTFSSILVSPTTNEDTNIEILDKDLRIDTYRASGAGGQHVNKTESAVRITHMPSGIVVQCQNNRSQHQNLAEAHNLLKSRLYQVKLQEKEKKMAEEHNKRCNIGWGNQIRSYIMHPYQMVKDVRTGHETGNVNSVLDGNLDSFIISALTTKT
>NZ_CP007474.1|WP_044194982.1|704079_704412_-|DUF721-domain-containing-protein
MLFRSGPKSIGAAIEKLILNKCNKNHISRVEVLLFLNWNSIVGKEISQVAKPRKLSFLDGMNTGVLYIMVNSGGVAINIQYAIPVIIEKISVFFGFKAVHEVKIRQHYNI
>NZ_CP007474.1|WP_044194986.1|704468_705989_-|hypothetical-protein
MKKSQLLYLFVACIILIAAIVLTIFLSKIYVIPSFNIIIGVAGAALSGIILFGITCAILHCQYPTTIHDVLPFVKKNEQVMLFIPLSDDQLNKLDLESDIVEIKYDRVESGININEDKNIVLNITQKKCGLWGKRTVDVVVDSNRKCMLLEDNVYISHMNSRGIAVLVNKKMSSIGDIVHKDGFRIKYPEMKDGVLSLACSYNVICSTLKDTLDMLRYRVEDPESYDYGYSIYELILKDLLIRFPYDIPTGEKDSRTGQSNGYKLAMALLTAFSTSKVLGNSPINEELVNSVALLKSYMAESKVTSYEEFYPELFERIRYKFCQRHEKIGSYGCLHNNYYTKYGVTFKEMLISSIRGGDSVLASMLAIASCHNGRGFTKTNDFFKEILSSVGCDDLVAEANRLIADGLHRKIDLSSCEFIKWKIFGALKVILTPSNTACSLDGLIYGARRYIMRKCYSSVTTLKCVPYSLIFRSIYNPVIMTGKESEQVVGSSNIEHVGVSHAVGM
>NZ_CP007474.1|WP_044194993.1|709496_709754_-|hypothetical-protein
MLNSNQRIIGALLVRIRKVLSSTQLISYVSTVLSGIAYPFQYICMKLLSSRNPTYIDNEPVEDLASSDNELVDNFLEDEVNVYAG
>NZ_CP007474.1|WP_044194996.1|710182_710764_-|hypothetical-protein
MEVNRIIMTAGSVLVTIAAAVGLILSCVNVRHNNWTDITNVIIFTFLLIIGFVLLCANYMGVRYDRVVNILYYNTIPDYVVPPDKSETCIFSKLKKIFAREKSSQVYGLPVSPIDRSDSSSCDMADQRFHYDNCSTSLLTNQNGSDQAIYETGFMDCNDLDCESVNSCLDTADLSMAAAEKMIEENMLLTSVR
>NZ_CP007474.1|WP_052349276.1|711228_711489_-|hypothetical-protein
MIKKHDLMINYSSFISITLAVVGLILCCTNTISHNQTSIGIFTFLFMMAIVLLAANYRKGINKKYIELNNYLTTFSSESIDSLNID

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Crispr_ID: NZ_CP007474_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP007474_3

741629-741710

Orphan

Consensus_repeat	Method
TAATGCAAATGATAAATTTATACA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP007474_3

>merge|NZ_CP007474|3|741629-741710|CRISPRCasFinder
TAATGCAAATGATAAATTTATACAGTGGATAAACCATTGTACTGTTTCATAAATCCGCTAATGCAAATGATAAATTTATACA

>NZ_CP007474|3|3|741629-741710|CRISPRCasFinder
TAATGCAAATGATAAATTTATACA	GTGGATAAACCATTGTACTGTTTCATAAATCCGC
TAATGCAAATGATAAATTTATACA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP007474.1\|WP_044195043.1\|737131_737425_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|371280
NZ_CP007474.1\|WP_044195067.1\|750026_750581_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007474.1\|WP_044195035.1\|729673_730045_+\|holo-[acyl-carrier-protein]-synthase	unknown	unknown	gnl\|CDD\|237780
NZ_CP007474.1\|WP_044195052.1\|741055_741376_+\|divalent-cation-tolerance-protein-CutA	unknown	unknown	gnl\|CDD\|376987
NZ_CP007474.1\|WP_044195063.1\|746660_748427_-\|DNA-primase	unknown	unknown	gnl\|CDD\|235551
NZ_CP007474.1\|WP_044195069.1\|750586_750859_+\|DUF2610-domain-containing-protein	unknown	unknown	gnl\|CDD\|371344
NZ_CP007474.1\|WP_044195057.1\|743037_743991_+\|tRNA-dihydrouridine-synthase-DusB	unknown	unknown	gnl\|CDD\|129820
NZ_CP007474.1\|WP_156928266.1\|752555_754421_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007474.1\|WP_044195885.1\|731809_732154_+\|DUF2793-domain-containing-protein	unknown	unknown	gnl\|CDD\|371324
NZ_CP007474.1\|WP_044195076.1\|754648_756028_-\|cysteine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234705
NZ_CP007474.1\|WP_044195040.1\|735608_737000_-\|bifunctional-ADP-dependent-NAD(P)H-hydrate-dehydratase/NAD(P)H-hydrate-epimerase	unknown	unknown	gnl\|CDD\|238576
NZ_CP007474.1\|WP_044195071.1\|751354_752338_-\|ribonucleotide-diphosphate-reductase-subunit-beta	unknown	unknown	gnl\|CDD\|236591
NZ_CP007474.1\|WP_044195032.1\|728402_729677_+\|proline--tRNA-ligase	unknown	unknown	gnl\|CDD\|237059
NZ_CP007474.1\|WP_044195046.1\|737660_738320_+\|O-methyltransferase	unknown	unknown	gnl\|CDD\|226607
NZ_CP007474.1\|WP_044195882.1\|730905_731379_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226335
NZ_CP007474.1\|WP_044195049.1\|738454_740938_+\|response-regulator	unknown	unknown	gnl\|CDD\|237425
NZ_CP007474.1\|WP_044195060.1\|744240_746109_+\|RNA-polymerase-sigma-factor-RpoD	unknown	unknown	gnl\|CDD\|235549
NZ_CP007474.1\|WP_044195065.1\|748944_749955_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224481
NZ_CP007474.1\|WP_044195054.1\|741762_742611_-\|4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol-kinase	unknown	unknown	gnl\|CDD\|184766
NZ_CP007474.1\|WP_044195038.1\|732745_735208_-\|type-I-DNA-topoisomerase	unknown	unknown	gnl\|CDD\|235840

Protein	Function_ID	Function_description	E-value
NZ_CP007474.1\|WP_044195043.1\|737131_737425_-\|hypothetical-protein	gnl\|CDD\|371280	pfam10877, DUF2671, Protein of unknown function (DUF2671). This family of proteins with unknown function appears to be restricted to Rickettsia spp.	0.00033204
NZ_CP007474.1\|WP_044195035.1\|729673_730045_+\|holo-[acyl-carrier-protein]-synthase	gnl\|CDD\|237780	PRK14659, acpS, holo-[acyl-carrier-protein] synthase.	1.10096e-70
NZ_CP007474.1\|WP_044195052.1\|741055_741376_+\|divalent-cation-tolerance-protein-CutA	gnl\|CDD\|376987	pfam03091, CutA1, CutA1 divalent ion tolerance protein. Several gene loci with a possible involvement in cellular tolerance to copper have been identified. One such locus in eubacteria and archaebacteria, cutA, is thought to be involved in cellular tolerance to a wide variety of divalent cations other than copper. The cutA locus consists of two operons, of one and two genes. The CutA1 protein is a cytoplasmic protein, encoded by the single-gene operon and has been linked to divalent cation tolerance. It has no recognized structural motifs. This family also contains putative proteins from eukaryotes (human and Drosophila).	1.2444e-34
NZ_CP007474.1\|WP_044195063.1\|746660_748427_-\|DNA-primase	gnl\|CDD\|235551	PRK05667, dnaG, DNA primase; Validated.	4.67759e-136
NZ_CP007474.1\|WP_044195069.1\|750586_750859_+\|DUF2610-domain-containing-protein	gnl\|CDD\|371344	pfam11020, DUF2610, Domain of unknown function (DUF2610). This family is conserved in Proteobacteria. One member is annotated as being elongation factor P but this could not be confirmed. This domain is related to the Ribbon-helix-helix superfamily so may be a DNA-binding protein.	6.2229e-48
NZ_CP007474.1\|WP_044195057.1\|743037_743991_+\|tRNA-dihydrouridine-synthase-DusB	gnl\|CDD\|129820	TIGR00737, Probable_tRNA-dihydrouridine_synthase, putative TIM-barrel protein, nifR3 family. This model represents one branch of COG0042 (Predicted TIM-barrel enzymes, possibly dehydrogenases, nifR3 family). This branch includes NifR3 itself, from Rhodobacter capsulatus. It excludes a broadly distributed but more sparsely populated subfamily that contains sll0926 from Synechocystis PCC6803, HI0634 from Haemophilus influenzae, and BB0225 from Borrelia burgdorferi. It also excludes a shorter and more distant archaeal subfamily.The function of nifR3, a member of this family, is unknown, but it is found in an operon with nitrogen-sensing two component regulators in Rhodobacter capsulatus.Members of this family show a distant relationship to alpha/beta (TIM) barrel enzymes such as dihydroorotate dehydrogenase and glycolate oxidase. [Unknown function, General].	1.5409e-130
NZ_CP007474.1\|WP_044195885.1\|731809_732154_+\|DUF2793-domain-containing-protein	gnl\|CDD\|371324	pfam10983, DUF2793, Protein of unknown function (DUF2793). This is a bacterial family of proteins with unknown function.	7.76698e-33
NZ_CP007474.1\|WP_044195076.1\|754648_756028_-\|cysteine--tRNA-ligase	gnl\|CDD\|234705	PRK00260, cysS, cysteinyl-tRNA synthetase; Validated.	0
NZ_CP007474.1\|WP_044195040.1\|735608_737000_-\|bifunctional-ADP-dependent-NAD(P)H-hydrate-dehydratase/NAD(P)H-hydrate-epimerase	gnl\|CDD\|238576	cd01171, YXKO-related, B.subtilis YXKO protein of unknown function and related proteins. Based on the conservation of the ATP binding site, the substrate binding site and the Mg2+binding site and structural homology this group is a member of the ribokinase-like superfamily.	1.60382e-71
NZ_CP007474.1\|WP_044195071.1\|751354_752338_-\|ribonucleotide-diphosphate-reductase-subunit-beta	gnl\|CDD\|236591	PRK09614, nrdF, ribonucleotide-diphosphate reductase subunit beta; Reviewed.	2.70887e-138
NZ_CP007474.1\|WP_044195032.1\|728402_729677_+\|proline--tRNA-ligase	gnl\|CDD\|237059	PRK12325, PRK12325, prolyl-tRNA synthetase; Provisional.	0
NZ_CP007474.1\|WP_044195046.1\|737660_738320_+\|O-methyltransferase	gnl\|CDD\|226607	COG4122, COG4122, Predicted O-methyltransferase [General function prediction only].	4.6462e-42
NZ_CP007474.1\|WP_044195882.1\|730905_731379_+\|hypothetical-protein	gnl\|CDD\|226335	COG3814, COG3814, Uncharacterized protein conserved in bacteria [Function unknown].	4.85078e-30
NZ_CP007474.1\|WP_044195049.1\|738454_740938_+\|response-regulator	gnl\|CDD\|237425	PRK13557, PRK13557, histidine kinase; Provisional.	1.25612e-78
NZ_CP007474.1\|WP_044195060.1\|744240_746109_+\|RNA-polymerase-sigma-factor-RpoD	gnl\|CDD\|235549	PRK05658, PRK05658, RNA polymerase sigma factor RpoD; Validated.	0
NZ_CP007474.1\|WP_044195065.1\|748944_749955_-\|hypothetical-protein	gnl\|CDD\|224481	COG1565, COG1565, Uncharacterized conserved protein [Function unknown].	2.07769e-76
NZ_CP007474.1\|WP_044195054.1\|741762_742611_-\|4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol-kinase	gnl\|CDD\|184766	PRK14610, PRK14610, 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase.	3.19984e-177
NZ_CP007474.1\|WP_044195038.1\|732745_735208_-\|type-I-DNA-topoisomerase	gnl\|CDD\|235840	PRK06599, PRK06599, DNA topoisomerase I; Validated.	0

>NZ_CP007474.1|WP_044195052.1|741055_741376_+|divalent-cation-tolerance-protein-CutA
MQNISLIYTTAPTYEDAYHISNILLDNKLIACANIFNNVTSVYLWENEVHNNTECAIILKTTNNLVQDTANKIQEIHPYDTPAIIIIDSINANDKFIQWVNHCTVS
>NZ_CP007474.1|WP_044195049.1|738454_740938_+|response-regulator
MKKRHTDNTQDNKVDFVIRKYGLSVCKLSIFLIAPLLCISSLYLFNIYDSYINIIINFIFTSISILAISIQLRQYLYIIASIEYQNMIFANSLNHNTEFCLIIKNDGKVVYADARFYERFIKNQEKKLDLFDILKLGNISKQEIEAFKNALKNKLSVNTYFCLNTKNKISNFTLILDPVLENPEIEISYVKTTNLFFAPLARPQEYFVLKAIKITKEQVYERLIQKHCVGAYLLNHRGVILSVNDTFLKMFELNSIENGTTFANFLTKNYNKEKIIDNNTVTLSTTTGIKFKAYISQAAFYDKNNHSYIYGLLTPVNSDTLNYHLHPCFIEAPIAILQCNTDGKILKSNNTLKRLVKHSKEYIFEYILPSYNKKIKKYFQNNIVKNMSLEAQLYNNLYVKIYFNKFIHQNNMFIICYITDSEDRKNLEIQLEQSQKMQAIGQLAGGIAHDFNNILTAIIGFCDLLLIRHTATDPSFSDIMQIKQNANRATNLIKQLLAFSRKQTLQPKIFDVNNIIADLLHMIKRLINESIELKIQYEQNINLVKADLCQLEQVIINLVVNARAAMETGGQLTIKTYNTKTDALKILLKDMFSPDKEQIEDGEYVAIEVSDTGHGMEDKIMKKIFDPFFSTKETVAGIGLGLSTVYGIVKQTDGYIYVKSTVNLGTTFIILIPTVHLSSSNDIEIPYNKYSNEVSTVLPEISTSTTILLIEDEDPVRIFVTRALTKKGFKVIDISCGDQALEIIKKYPIDIVISDVVMPKISGPEIVEKILKVKPNIQIIFISGYAEEVFNKHNNINASKINFLSKPFTLKQLTEKVLEISNNHLQN
>NZ_CP007474.1|WP_044195046.1|737660_738320_+|O-methyltransferase
MRNKILSKKLQYIHDLFSITDAEVVATHQLIKDDISLMQLNLIEGQILQLLIKMNNIKSIIEIGTFVGSSAMCMAKALSENGHIYTIEKNTINAELAEDNFKKYNLSHKITVINDIGTLALQKLTNMSPFDMIFIDANKSGYCDYLDWAESNIKKNGLIVADNTLLFGNVYSNNNAIKKVSKTTIDKMLSFNERLSDKDKYLTTLLPTEEGMTIALKLF
>NZ_CP007474.1|WP_044195043.1|737131_737425_-|hypothetical-protein
MSFYTHDVMKKQVADTFNKSGNATYSVLNDPAYRDRYREKFLEAQKKGMDMVVYYDGTIALIENKIAMYQYGWHKKRREFERIKFATETKKKKSKSS
>NZ_CP007474.1|WP_044195040.1|735608_737000_-|bifunctional-ADP-dependent-NAD(P)H-hydrate-dehydratase/NAD(P)H-hydrate-epimerase
MVVLDGQQVVSFEKSCGVAIDELICKAGKVIGDTIFNMFPRQPVIVISGPGNNGRDGIVAAKMLKAHGWPVVLMLYNCTTHIDEDWVVPLTYDNIVNSQSCLIVDALFGIGLSRYIPEDLSCIFSYINNSNNKIVVAVDIPSGINCNTGQVMGCAIRADVTITFSALKIGHVLFPGSSYSGKVRVVDIGIGIDYSKVTIRKNTPTLWKNEIPKLEYITNKYTRGYTLVCSVGNKSIGASKLVAMSALRVGSGIVSIACDSNAFAFYASCLTSIMYRLYDDVINDDRITSIIIGPGCGISEITRQRTMDVLSKQNCVLDADSISVFSDSYEILFSKIKHNVIMTPHEGEFKRIFPFLTGSKIEMAQKAASLSKAVIVLKGPDTIIADPVGNVVVNNAPFSLATAGSGDVLSGIIGGLLSSGMNPFDAACCGVWIHTKCAREYGIGLIADDIILQIPQVLKKLFC
>NZ_CP007474.1|WP_044195038.1|732745_735208_-|type-I-DNA-topoisomerase
MSLIIVESPSKAKTIGKYLGSKYKVVASFGHIRDFPAKSGSVDPDRDFAMTYEIISKSEKYINKLIQTANKETQNIYLATDPDREGEAIAWHIVEVLKENNAIDNNVVINRMVFNEVTKSAILESIKHPRSINMDLVYAQQARRALDYLVGFTLSPLLWRKLPGSKSAGRVQSVALRLICDRESDIEKFVTQEYWDIEAKCCNIEGKQFSAFLSCYSGKKLEKFDIQNEKDAQKLSEEVKSRSYSVVNVEKKHTRRNPYPPFITSSLQQEASTKLGFSAKNTMIIAQKLYEGIDVGGEIIGLITYMRTDGFYIADEALEHIRSIIVSMFGKEYLPESARKYIKKVKNAQEAHEAIRPTNITITPDSLSNYLTPEQLKLYDLIWKRTVASQMSSAVIDQVVVELGSLDKVVTLRATGSSLFFDGFYKVYGHNEDDDNKNNMLPLLHVGDMCPLNEVIPHQHFTIPPARYNEASLVKKMEEIGIGRPSTYASIISVLQDRQYVVLNQKRFFPTERGRIVNIFLVNFFSRYVEYDFTADLEEKLDLISNGKINWKEVLHQFWFLFIDNVDSVKKLEFTEILKVISCAMEDYIFSSDKSESGKTCPVCNDGTLELNISKNGIFLGCSKYPECKYTKNVGGDIIDDTDNIQYPKVLGVDITTGKDIYLKKGPYGIYLQIGSDKNGKRAAIPKGMDANLLNLQMAEKILSLPIRLGIHPDTGQEIKLGLGKFGAYILYEGKYFSIKNERNFLDISVEDAINIITNNSTNGVIKSLGVVENNNEVFLCKGRYGFYLKYAKLNIALKKGIDVDQISLSDAIKLISEKL
>NZ_CP007474.1|WP_044195885.1|731809_732154_+|DUF2793-domain-containing-protein
MTTQSINLKFDLVIHNQAHKEITVNEALIKIDMLMNNCILELQCNTPIKEISSGDMYIIGPVPTIQEWKNKQNYVTYYYINQWYFIQPNTGLTLWVKSKNQLYTYSNGQWISKL
>NZ_CP007474.1|WP_044195882.1|730905_731379_+|hypothetical-protein
MSNVIEYQKLMHTAICGVIKDALTIVAQSPHSYNIHIAISFLTHYKGVILPDHVKNNYPREITIILQHQFRNLQVFNNSASVVLSFQGKEETVIIPYYSIIKYIDVHQGFALDLEQYTSNNIEELEDCSNDIDNTNEESDKKGNQDNIIFIDTFLKK
>NZ_CP007474.1|WP_044195035.1|729673_730045_+|holo-[acyl-carrier-protein]-synthase
MILGIGTDIVYVPRISNLYKKFGTKFLKRVFNEKEIEDSKKYTNFDAQVRHFAKRFAAKEAYVKALGTGFGKSIKMSDIIISNNLYGKPQITINNNSTKHKIELSISDEKDYAIAFIVLYIEL
>NZ_CP007474.1|WP_044195032.1|728402_729677_+|proline--tRNA-ligase
MRLSNYYVPTLKETSSDISVISHQYSIRAGLIRQIASGIYTWLPLGLKILKNIENIIREEMNKSGALEILMPLIQPASLWKESGRYDDYGSEMLRITDRNQRDMLFGPTHEEVITDILRTTPISHRNLPLILYQIQWKFRDELRPRYGIMRCREFLMKDAYSFDKDLNSAISSYNLMFKVYIQIFKKLGLTPIAVKADPGPVGGTLSHEFHVLANSGESTLYYDQDIIELMNSDSIDVEKIKNTYTAADDMTDPKTSPIPLDKIKISKGIEIGHIFYLGDKYSKPMNANFCDNNNNKPLQMGCYGIGVSRLVAAIIEVFHDNRGIIWPEQIAPFKFSLVNLYSSNDKCRKVSENLHIQLHDDILYDDTDDSPGIKLARTDLLGMPWQIIVGKSTVEQDLIEVRNRSTKDTFLISMEQFLKKFKK
>NZ_CP007474.1|WP_044195054.1|741762_742611_-|4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol-kinase
MSKFLVKAPAKVNLFLHITGKRDDQYHYLESLFVFVNVYDILEVDVGASKSGVYFSNFKISQYNNTVYKAIELLLKHSAIRPNVSVSIIKNILVSAGLAGGSADAAAIMRLLGNMWNIDYRLLQDLALKIGSDVPACLESKTLFAKGVGEDILLLPDLLLPKYIILVAPRGKALSTAKIFNNYQSCTYSPSICDKLPVKGDDWMELIYNSKNDLLEVALRFVPEIEEILFVLKKLKNSVIARMTGSGVTCFALFNELSHAEDAARKLQMTRPDWIVFNAKIL
>NZ_CP007474.1|WP_044195057.1|743037_743991_+|tRNA-dihydrouridine-synthase-DusB
MDISQFISDYPVILAPMSGVTDLPFRTLIKNLGAGLLVSEMIASHAMIIQTKQSLQKSQIQTNTAVQLSGCNPTIMAEAAKLNEDMGTKIIDINFGCPVKKVVNSYAGSALMKDEITAAKILESVVKAVKIPVTLKMRTGWDSNHLNSPQLAKIAEETGIKMITIHGRTRTQMFTGKADWKFISNIKKCVKIPVIANGDIKNLHDIKTSLKESQADGIMIGRGIYGKPWFINQALHFIKSGTILPDPSPSEKLQIITNHYDHMIEYYGKDIGTKISKKHIGWYSASLDNSAEFRSQINCSNDHNFIRDKITDFFSQN
>NZ_CP007474.1|WP_044195060.1|744240_746109_+|RNA-polymerase-sigma-factor-RpoD
MKDLQTDKELLRTLVSKGLKQGFVTFNDINDVFSDYVLSSDNIDETISMLQDSGINVLEQSDEDEANSIVEENRIKEDMDEDEVSDTNIKSWDFGQTDDPIRMYLCEMSSVELLSREGEIEIAKKIKSEKVNMLRSLVESPVVLRTFMSWRDDLVNEQIMLRDLIDLDANYRYEFPEKFSDTDEASVLDYDKDLIDEPDEDPDISEDEDEENVSINTSILEMENALLPKVISILDSVIASAEKILELKKQHQGKINKDIEKQYNDLHDSIWEMIYQIKLSNSAVLSITQQIYSLSKSIAAEEAKIISLAESYGIQRKDFLDAYNTNSVLKKKGISPQWDNMLLNEEGNIISMYSKIKLLSGEDNLTEFKALVTKIQKHERAANQAKQEMIKANLRLVVSIAKKYSNRGLQFLDLVQEGNIGLMKAVDKFDYKRGYKFSTYATWWVRQAITRAIADQARTIRIPVHMIETVNKINRTLRQMLHEMGREPTLEELSARLNINVDKIRKVMKIVKDPVSLESPIGDDDSSTFGDCIEDKRAVKPEDAAILADLREITTKVLSTLTPKEERILRMRFGIGKGGKDHTLEEVGKLFNVTRERIRQIEAKALRKLRHPSRARKLRGFF
>NZ_CP007474.1|WP_044195063.1|746660_748427_-|DNA-primase
MNVVDIIKSRIKLSDVVGQRVKLTGRGNSVIGLCPFHSEKTPSFTVSDEKGLYYCFGCGANGDVIQFISDINALDFRGAIDYLAEMYGIDLPQNTNKKVSLSPILDAATLWFEKQLYTNHIAIEYIKSRKIFGSTVKKFRLGYAPAYGLSKYLLSLGFNVDDIRSTGLLNSQDQDYFYNRIIFPICNFSGNVIGFGGRSIVDIQTPKYLNSKGNVFFQKRENLYASHLAIRDAKKQGKIIVVEGYMDVLMLHQIGISNVVGLLGTSMTSEHLVYLWGITSEIIVWMDGDVAGKIASIKSASLALSLVKPGCIIKFVDVFTGKDPYDICINGGIDSAITLLDNAKLLSEFIWDYELAKVSVNKNTIMPEQCVMLEAKIKRYLDQIGDNSVMKYYKKYFYSQIRNLQYSKDKSKTLDSGSSVNRANNKLKYINDEFLLEEYNQLRVVYIIMEFPELLDDPIIFDQFSNFNISNKDVYRLQQNIINIKVTLCNHVISKEILLLELKKSNLDDIADFVSKKMSTSNFMLLQNRNYNIDVSKKEVEKIMLLNHLQCIQTEILDLQLQGKRDLAEKLSNQAQEIDNRLRELWNY
>NZ_CP007474.1|WP_044195065.1|748944_749955_-|hypothetical-protein
MDSYLKKIILNCGGAISMEQFIRIALYDVHHGYYMTRIPFGAHGDFITAPEISQLFGEVIALWILLSWQKMGYPSKFVIVELGPGKGTLISDIIRVLKKFEQCHAATIVYLVEVSPVLEKLQRSVLKDEKIFWCKDIKDVPDYPVLFVANEFFDALPIRQFMYIGNSWCEVYVAVENNEFKIAYRRVDKMFKISSDIKNPVIEICDEAVSIIKCIENKILQSGGAAVIIDYGYVNCPYESTIQSIKNHRYNDLFRNIGESDITAYVNFDVLHNSLSTLRSIIMTQRDFLYSFGIKERLQVLIENATETQKQNLMTGFLRLTENMGSMFKVLLVNPR
>NZ_CP007474.1|WP_044195067.1|750026_750581_+|hypothetical-protein
MMLSIFQKQLGWQFTDYIGNGVYSLYSALTAIKDKCNPYSKVNQSDINMSFTTLHKNDVKNVMGQEYSNTVNDLSNADLLDQPTANEEILSQDNSNSHNIETQKYDNNNIMLYDEEISYEMAYSLLLNLVNNDIELLEEALLIAKTLVREGVLVAPESRIRKNITQIVLHSIRKRTVQSSGYSR
>NZ_CP007474.1|WP_044195069.1|750586_750859_+|DUF2610-domain-containing-protein
MPGIKKFIVPCDFSGQSSPFAIYIGEPKPDNHPVQHQDNWLAKERGGNIPEKVKDSLAKLHALAQKNGICFSDLCVYALTVASHKNTKNS
>NZ_CP007474.1|WP_044195071.1|751354_752338_-|ribonucleotide-diphosphate-reductase-subunit-beta
MSLLDSRPIYKPFNYPWAYDAWLCQQRIHWLPEEVPLADDVQDWKTVLSEKEKNLLVQIFRFFTQADIEVNNCYMKHYSNIFKPTEVCMMLSAFSNMETIHIAAYSYLLDTIGMPEIEYQAFLKFEVMKKKYDYMQRFEECRKNDKRHVAKTLAVFGAFTEGLQLFASFAILLNFQRFGKMKGMGQIIAWSVRDETLHTESIIRLFNTFIQENYEIWDDSLKQELYEACRIIVSLEDEFINLAFACGDVEGLSSKGVKEYIRYIANRRLLQLNLEPIYDATKNPLLWLDEILNGVEHTNFFENRVTEYARAATEGTWEEAFEDHDII
>NZ_CP007474.1|WP_156928266.1|752555_754421_+|hypothetical-protein
MRANIMLTQDQQRAAMNNITLKKYVTDTTLEKIDEALIDISNAIPLCIALTLDIQPDFASFKQETTSILQEYKEWFIANQIPKMPLIDERTSDTLWKSIQEMHTLYHKYQISVSSDASTNMLNRIAFHSSPNKKEITINNNFKYNIQYTMLTLLIDQCFDLNPKYRTTYTSEILFKTVEIRNRIMDQLKTILFQHVQKKTFFSYAKYLQNLYNMQASYAVEKDVDLLRTTKQFIGLEAIHIFNQEIFSNINLILDNGCDINIKCDVPTYTKIFLEISDIHISGTVYGSIFNKYGSIIITNAKEECSQNIISIFGTVSINGRIIKKKLPDMFTIPPNFCRDIKDKSIITKQTDLCQAEKQITSFYPWDVINQKDENGIRALNIESFHPKLQHHAVIVSIGWPINQHNTTPTKNAESLFYNIIHNANHLNIIDDISPDKRLPCTFFDHSIPMFIYNIRIEDKKLIIDNLSKSIALYLTYITHSGTNLISKFGVHEVVIYSRAVDFSILILHDTDVTIFGKFCGLLHTNKGNITIIGQVNKSHIISNTGLIKLQNNPSDSKASIAIDSAIIAQYGAVEVTGQYSNSYIDSKNITNKSPNTTNAIPPSSYLTRLSKIFHPFVSRE
>NZ_CP007474.1|WP_044195076.1|754648_756028_-|cysteine--tRNA-ligase
MIIYNTLTGIKEPFIPLNSNNVKVYVCGPTVYDFAHIGNSRSIVIYDVLFRLLKLLYPKVTYVRNITDVDDKIINIAQSSKQNIYDVTSIYTRAFHEDMKMLNCLDPTYEPRATDNVDIMINLIQKLIDLGHAYVYNGSVFFNIKSYLSYGKLSRRNISELIYGSRVDVGLGKKHPGDFVLWKPATEIDSQLMGCWSSPWGLGRPGWHIECSAMSYCYLGENFDIHGGGADLQFPHHENEIAQSCCAFPGSYYAKYWVHNGFLTVNGEKMSKSLGNILTVRQLLDNGIKGELIRYVLLSAHYRKPLDWSSKVVANAQESLNRMYTALSSINADLSLDSGVELSGNVIDCLKDDINTPKAISILHEMVTEINKTSDIMKKVCLAKTLIKTANFLGILQHSWQDWFKIDNHDQEISQLIDERKKARASNDFKKADDIRQLLLDRGIVLSDNKDGTTHWYKK

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP007474_2	2.1\|696389\|25\|NZ_CP007474\|CRISPRCasFinder	696389-696413	25	NZ_CP007474.1	694497-694521	0	1.0
NZ_CP007474_3	3.1\|741653\|34\|NZ_CP007474\|CRISPRCasFinder	741653-741686	34	NZ_CP007474.1	741349-741382	2	0.941
NZ_CP007474_3	3.1\|741653\|34\|NZ_CP007474\|CRISPRCasFinder	741653-741686	34	NZ_CP007474.1	741500-741533	2	0.941

1. spacer 2.1|696389|25|NZ_CP007474|CRISPRCasFinder matches to position: 694497-694521, mismatch: 0, identity: 1.0

gtaaattagattctacaaatcttac	CRISPR spacer
gtaaattagattctacaaatcttac	Protospacer
*************************

2. spacer 3.1|741653|34|NZ_CP007474|CRISPRCasFinder matches to position: 741349-741382, mismatch: 2, identity: 0.941

gtggataaaccattgtactgtttcataaatccgc	CRISPR spacer
gtgggtaaatcattgtactgtttcataaatccgc	Protospacer
****.****.************************

3. spacer 3.1|741653|34|NZ_CP007474|CRISPRCasFinder matches to position: 741500-741533, mismatch: 2, identity: 0.941

gtggataaaccattgtactgtttcataaatccgc	CRISPR spacer
gtgggtaaatcattgtactgtttcataaatccgc	Protospacer
****.****.************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP007474_2	2.1\|696389\|25\|NZ_CP007474\|CRISPRCasFinder	696389-696413	25	MT074137	Bacteroides phage DAC16, complete genome	137274-137298	3	0.88
NZ_CP007474_2	2.1\|696389\|25\|NZ_CP007474\|CRISPRCasFinder	696389-696413	25	MT074142	Bacteroides phage DAC23, complete genome	139305-139329	3	0.88
NZ_CP007474_2	2.1\|696389\|25\|NZ_CP007474\|CRISPRCasFinder	696389-696413	25	MT074141	Bacteroides phage DAC22, complete genome	139749-139773	3	0.88
NZ_CP007474_2	2.1\|696389\|25\|NZ_CP007474\|CRISPRCasFinder	696389-696413	25	MT074139	Bacteroides phage DAC19, complete genome	139386-139410	3	0.88
NZ_CP007474_2	2.1\|696389\|25\|NZ_CP007474\|CRISPRCasFinder	696389-696413	25	MT074140	Bacteroides phage DAC20, complete genome	139385-139409	3	0.88
NZ_CP007474_2	2.1\|696389\|25\|NZ_CP007474\|CRISPRCasFinder	696389-696413	25	AP014347	Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S38-C55, * SEQUENCING IN PROGRESS *	18242-18266	4	0.84
NZ_CP007474_2	2.1\|696389\|25\|NZ_CP007474\|CRISPRCasFinder	696389-696413	25	NC_022980	Brevibacillus phage Davies, complete genome	28495-28519	4	0.84

1. spacer 2.1|696389|25|NZ_CP007474|CRISPRCasFinder matches to MT074137 (Bacteroides phage DAC16, complete genome) position: , mismatch: 3, identity: 0.88

gtaaattagattctacaaatcttac	CRISPR spacer
ttaaattagattcttcaaaacttac	Protospacer
 ************* **** *****

2. spacer 2.1|696389|25|NZ_CP007474|CRISPRCasFinder matches to MT074142 (Bacteroides phage DAC23, complete genome) position: , mismatch: 3, identity: 0.88

gtaaattagattctacaaatcttac	CRISPR spacer
ttaaattagattcttcaaaacttac	Protospacer
 ************* **** *****

3. spacer 2.1|696389|25|NZ_CP007474|CRISPRCasFinder matches to MT074141 (Bacteroides phage DAC22, complete genome) position: , mismatch: 3, identity: 0.88

gtaaattagattctacaaatcttac	CRISPR spacer
ttaaattagattcttcaaaacttac	Protospacer
 ************* **** *****

4. spacer 2.1|696389|25|NZ_CP007474|CRISPRCasFinder matches to MT074139 (Bacteroides phage DAC19, complete genome) position: , mismatch: 3, identity: 0.88

gtaaattagattctacaaatcttac	CRISPR spacer
ttaaattagattcttcaaaacttac	Protospacer
 ************* **** *****

5. spacer 2.1|696389|25|NZ_CP007474|CRISPRCasFinder matches to MT074140 (Bacteroides phage DAC20, complete genome) position: , mismatch: 3, identity: 0.88

gtaaattagattctacaaatcttac	CRISPR spacer
ttaaattagattcttcaaaacttac	Protospacer
 ************* **** *****

6. spacer 2.1|696389|25|NZ_CP007474|CRISPRCasFinder matches to AP014347 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S38-C55, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 4, identity: 0.84

gtaaattagattctacaaatcttac	CRISPR spacer
gtaaatcagattctacaactcttgt	Protospacer
******.*********** ****..

7. spacer 2.1|696389|25|NZ_CP007474|CRISPRCasFinder matches to NC_022980 (Brevibacillus phage Davies, complete genome) position: , mismatch: 4, identity: 0.84

gtaaattagattctacaaatcttac	CRISPR spacer
caaacttagattctacaaatgttac	Protospacer
  ** *************** ****

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP007474

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection