CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP007478	Ehrlichia chaffeensis str. Saint Vincent, complete genome	2 crisprs	cas3	0	0	0	0

Cas Category Instructions

Results visualization

1. NZ_CP007478

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP007478_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP007478_1

27620-27709

Orphan

Consensus_repeat	Method
TTTTTGTTTACTATAGCAAAAGCT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP007478_1

>merge|NZ_CP007478|1|27620-27709|CRISPRCasFinder
TTTTTGTTTACTATAGCAAAAGCTGTTGATAAGTTTATACTAGTTGTTGTTTTTCCTACACCACCTTTTTGATTTACTATAGCAAAAGCT

>NZ_CP007478|1|1|27620-27709|CRISPRCasFinder
TTTTTGTTTACTATAGCAAAAGCT	GTTGATAAGTTTATACTAGTTGTTGTTTTTCCTACACCACCT
TTTTGATTTACTATAGCAAAAGCT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP007478.1\|WP_006010636.1\|28315_28723_-\|EVE-domain-containing-protein	unknown	unknown	gnl\|CDD\|376640
NZ_CP007478.1\|WP_006010644.1\|31410_33999_-\|preprotein-translocase-subunit-SecA	unknown	unknown	gnl\|CDD\|237259
NZ_CP007478.1\|WP_044147496.1\|30414_30960_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007478.1\|WP_080502261.1\|24346_24736_-\|50S-ribosomal-protein-L19	unknown	unknown	gnl\|CDD\|235418
NZ_CP007478.1\|WP_011452342.1\|24716_25424_-\|tRNA-(guanosine(37)-N1)-methyltransferase-TrmD	unknown	unknown	gnl\|CDD\|234581
NZ_CP007478.1\|WP_011452348.1\|19335_20037_+\|Bax-inhibitor-1/YccA-family-protein	unknown	unknown	gnl\|CDD\|198414
NZ_CP007478.1\|WP_044147492.1\|28729_29995_-\|cell-division-protein-FtsZ	unknown	unknown	gnl\|CDD\|236468
NZ_CP007478.1\|WP_006010646.1\|34404_34833_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007478.1\|WP_011452345.1\|21355_23257_-\|threonine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234752
NZ_CP007478.1\|WP_006010630.1\|26091_26937_-\|ParB/RepB/Spo0J-family-partition-protein	unknown	unknown	gnl\|CDD\|275105
NZ_CP007478.1\|WP_006010628.1\|25407_25935_-\|16S-rRNA-processing-protein-RimM	unknown	unknown	gnl\|CDD\|173056
NZ_CP007478.1\|WP_006010634.1\|27854_28319_-\|rRNA-maturation-RNase-YbeY	unknown	unknown	gnl\|CDD\|223396
NZ_CP007478.1\|WP_011452349.1\|18247_19267_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007478.1\|WP_155265762.1\|35294_35660_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007478.1\|WP_044148288.1\|38347_39178_-\|P44/Msp2-family-outer-membrane-protein	unknown	unknown	gnl\|CDD\|366729
NZ_CP007478.1\|WP_011452346.1\|20809_21331_-\|translation-initiation-factor-IF-3	unknown	unknown	gnl\|CDD\|234582
NZ_CP007478.1\|WP_044148280.1\|23602_24088_+\|CinA-family-protein	unknown	unknown	gnl\|CDD\|334938
NZ_CP007478.1\|WP_044148120.1\|20058_20523_+\|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-ATPase-subunit-type-1-TsaE	unknown	unknown	gnl\|CDD\|376771
NZ_CP007478.1\|WP_044170816.1\|36137_36974_+\|P44/Msp2-family-outer-membrane-protein	unknown	unknown	gnl\|CDD\|366729
NZ_CP007478.1\|WP_044170819.1\|37146_37962_+\|P44/Msp2-family-outer-membrane-protein	unknown	unknown	gnl\|CDD\|366729

Protein	Function_ID	Function_description	E-value
NZ_CP007478.1\|WP_006010636.1\|28315_28723_-\|EVE-domain-containing-protein	gnl\|CDD\|376640	pfam01878, EVE, EVE domain. This domain was formerly known as DUF55. Crystal structures have shown that this domain is part of the PUA superfamily. This domain has been named EVE and is thought to be RNA-binding.	8.28312e-48
NZ_CP007478.1\|WP_006010644.1\|31410_33999_-\|preprotein-translocase-subunit-SecA	gnl\|CDD\|237259	PRK12904, PRK12904, preprotein translocase subunit SecA; Reviewed.	0
NZ_CP007478.1\|WP_080502261.1\|24346_24736_-\|50S-ribosomal-protein-L19	gnl\|CDD\|235418	PRK05338, rplS, 50S ribosomal protein L19; Provisional.	4.30977e-57
NZ_CP007478.1\|WP_011452342.1\|24716_25424_-\|tRNA-(guanosine(37)-N1)-methyltransferase-TrmD	gnl\|CDD\|234581	PRK00026, trmD, tRNA (guanine-N(1)-)-methyltransferase; Reviewed.	1.0968e-137
NZ_CP007478.1\|WP_011452348.1\|19335_20037_+\|Bax-inhibitor-1/YccA-family-protein	gnl\|CDD\|198414	cd10432, BI-1-like_bacterial, Bacterial BAX inhibitor (BI)-1/YccA-like proteins. This family is comprised of bacterial relatives of the mammalian members of the BAX inhibitor (BI)-1 like family of small transmembrane proteins, which have been shown to have an antiapoptotic effect either by stimulating the antiapoptotic function of Bcl-2, a well-characterized oncogene, or by inhibiting the proapoptotic effect of Bax, another member of the Bcl-2 family. In plants, BI-1 like proteins play a role in pathogen resistance. A characterized prokaryotic member, Escherichia coli YccA, has been shown to interact with ATP-dependent protease FtsH, which degrades abnormal membrane proteins as part of a quality control mechanism to keep the integrity of biological membranes.	1.09795e-59
NZ_CP007478.1\|WP_044147492.1\|28729_29995_-\|cell-division-protein-FtsZ	gnl\|CDD\|236468	PRK09330, PRK09330, cell division protein FtsZ; Validated.	0
NZ_CP007478.1\|WP_011452345.1\|21355_23257_-\|threonine--tRNA-ligase	gnl\|CDD\|234752	PRK00413, thrS, threonyl-tRNA synthetase; Reviewed.	0
NZ_CP007478.1\|WP_006010630.1\|26091_26937_-\|ParB/RepB/Spo0J-family-partition-protein	gnl\|CDD\|275105	TIGR04285, parB-like_partition_protein, nucleoid occlusion protein. This model describes nucleoid occlusion protein, a close homolog to ParB chromosome partitioning proteins including Spo0J in Bacillus subtilis. Its gene often is located near the gene for the Spo0J ortholog. This protein bind a specific DNA sequence and blocks cytokinesis from happening until chromosome segregation is complete.	3.19546e-71
NZ_CP007478.1\|WP_006010628.1\|25407_25935_-\|16S-rRNA-processing-protein-RimM	gnl\|CDD\|173056	PRK14592, rimM, 16S rRNA-processing protein RimM; Provisional.	8.7732e-94
NZ_CP007478.1\|WP_006010634.1\|27854_28319_-\|rRNA-maturation-RNase-YbeY	gnl\|CDD\|223396	COG0319, COG0319, Predicted metal-dependent hydrolase [General function prediction only].	7.45116e-36
NZ_CP007478.1\|WP_044148288.1\|38347_39178_-\|P44/Msp2-family-outer-membrane-protein	gnl\|CDD\|366729	pfam01617, Surface_Ag_2, Surface antigen. This family includes a number of bacterial surface antigens expressed on the surface of pathogens.	9.47638e-130
NZ_CP007478.1\|WP_011452346.1\|20809_21331_-\|translation-initiation-factor-IF-3	gnl\|CDD\|234582	PRK00028, infC, translation initiation factor IF-3; Reviewed.	1.15803e-71
NZ_CP007478.1\|WP_044148280.1\|23602_24088_+\|CinA-family-protein	gnl\|CDD\|334938	pfam02464, CinA, Competence-damaged protein. CinA is the first gene in the competence-inducible (cin) operon, and is thought to be specifically required at some stage in the process of transformation. This Pfam family consists of putative competence-damaged proteins from the cin operon. Some members of this family have nicotinamide mononucleotide (NMN) deamidase activity.	3.53183e-56
NZ_CP007478.1\|WP_044148120.1\|20058_20523_+\|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-ATPase-subunit-type-1-TsaE	gnl\|CDD\|376771	pfam02367, TsaE, Threonylcarbamoyl adenosine biosynthesis protein TsaE. This family of proteins is involved in the synthesis of threonylcarbamoyl adenosine (t(6)A).	3.08978e-43
NZ_CP007478.1\|WP_044170816.1\|36137_36974_+\|P44/Msp2-family-outer-membrane-protein	gnl\|CDD\|366729	pfam01617, Surface_Ag_2, Surface antigen. This family includes a number of bacterial surface antigens expressed on the surface of pathogens.	2.0188e-42
NZ_CP007478.1\|WP_044170819.1\|37146_37962_+\|P44/Msp2-family-outer-membrane-protein	gnl\|CDD\|366729	pfam01617, Surface_Ag_2, Surface antigen. This family includes a number of bacterial surface antigens expressed on the surface of pathogens.	1.5992e-96

>NZ_CP007478.1|WP_006010630.1|26091_26937_-|ParB/RepB/Spo0J-family-partition-protein
MTKRLGKGIFELIGNSTLEINNNISTDTHLTMPINLLNPSTSQPRKTFNQECLKELAESISKHGIIQPIIIRKNPHKKGYEIIAGERRWRASILAKLKSVPVIVKEISDSQCLELSIIENIQRQDLTPIEEAEAYSNLINTFSYTHEDLASIIGKSRSHITNMIRILSLPTSIKSMINDKLISFGHARALINIENPEAIAEKIISLNLNVRQTELLIKNLQKPHKKKSKENLTELEQSLSEILNLQIKINGLKNKGSIVIKYNNTQQLNSILEKLKKVTQT
>NZ_CP007478.1|WP_006010628.1|25407_25935_-|16S-rRNA-processing-protein-RimM
MENDLICLGVITSSHGISGHVKIKTFTENPEDFTSYGTLTDGINTYEVEIISIISQNIIIAQIKGIVSRTDADLLRNKKFFVEKNKLPNPTNDDEFYYSDLIGLNVVLENNNVYGNIKKIHNFGSCDIIEIRLSNSKKSTMLPFTKDIFPYVNVKEKYIIITLPEVIGNNSDIQR
>NZ_CP007478.1|WP_011452342.1|24716_25424_-|tRNA-(guanosine(37)-N1)-methyltransferase-TrmD
MTFNVNVLTIFPEMFPGTLSHSIIGRALNKGLWNLNVIDIRSFAKDKHKTVDDRPYGGGPGMIMKADVIGSAIDEVLSKNKNTKLIYMSPSGIKLNQDISGQLTHFSNITILCGRFEGIDKRILDFYDFHEISIGDYILSGGEVACMVLIETCVRLIPGVVSNTQSIRDESFTLDYKLEYPQYTRPAKWRGLEVPDVLLSGNHKKINLWKANQSYCITKQRRPELTGTIDGDIYE
>NZ_CP007478.1|WP_080502261.1|24346_24736_-|50S-ribosomal-protein-L19
MEIYMSDLLKEFNEQQMKLLSNKEIPKFSSGDTLRVSMKIFDGVSERLQVFEGVCIKRKNNGLHSSFTLRKISYNESIQLQVFLYSPIVESIEVIKFGRVRRAKLYYMLSLFGKSARIKERSDRTKKLS
>NZ_CP007478.1|WP_044148280.1|23602_24088_+|CinA-family-protein
MIIEQEILNKAETCVSKLIENNSKIVIAESCTAGLMSFLFSCIPGASKVLDSSFVVYSDESKAKFLNIDKDLISKYGAVSSEVSVLMAVGVLENSKANVSVSITGFAGPRVGDEQVGLVYIGYASNIERDCKKYYFSDMNRCKVQMSSASAAMDFLLHKMK
>NZ_CP007478.1|WP_011452345.1|21355_23257_-|threonine--tRNA-ligase
MINIHFSNNLCKQFHRGIKGHDIVNDLFPKLKNETIAAKVNGELYDLSREIIENCTFEVITINSEEGLEIIRHDTAHIMAQAVKEMFPDVQITIGPTIKDGFYYDFATNHNFSSDDLEIIEKKMIEIINKNESFIREVWSREEAIKFFSSIGEDYKVKIISNIPSNENITVYKQGSFTDLCRGPHAPSTKTSRAFKLTKVSGSYWQGNSNNERLQRIYGTAWRNEEELKLYLNNLIEAEKRDHRKIGRELELFHIQNEACGQIFWHTKGWTIYRIIENYIRKKLENNGYIEVKTPILLNKELWEKSGHWDKFRENMFLSEAEDKTLAIKPMNCPCHIQIFNSKIRSYRDLPIRMAEFGTCHRYEASGALHGLMRVRGFTQDDAHIFCTESQITSEALKFCNLLIEIYKDFGFTDILVKFSDRPKNRAGSDEIWDKAEAALKKSVEVANLSYVLNPGDGAFYGPKLEFTLKDAIGREWQCGTLQMDFVLPERLGAYYIGSDGKKHHPVMLHRAILGTFERFIGILIEHHSGKFPMWLAPIQLSILTISEDSINYANSLKIKAEEHNIRVELDTTNEKINYKIRNHIHKKVPVFWIVGKKEVEENSVSIRYLESNKQHVMPIDKALKTLLTCASI
>NZ_CP007478.1|WP_011452346.1|20809_21331_-|translation-initiation-factor-IF-3
MKTKKFSNKNKINEMITAKKVKLVDQNSVMIGVVDIEEALSRAKAVNLDLVEIVHDDQYPLCKIFDYSKYRYSHKKKISDSKKKQKTIIVKELKFKLNIGDNDYNVKLNMLRGFIERGDKVKISLRFIGREILHPEVGMEIIERLIRDTADIAKPENLPKKEGNIINMVLTAK
>NZ_CP007478.1|WP_044148120.1|20058_20523_+|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-ATPase-subunit-type-1-TsaE
MQFKYSSVDLVFLEKLARFIALGLKKGDSISLVGDLGVGKTTFVRFLVHALAPCEDVGSPTFSIINEYHSNKFTIYHIDLYRINSLREVYDLGIESICDDGVGIIEWPDLLNDILDFNLKINIKYSTKENLRDVEVFIKDDDKCGIFESFVSSN
>NZ_CP007478.1|WP_011452348.1|19335_20037_+|Bax-inhibitor-1/YccA-family-protein
MDNYSNVQQGAYYSAGLRNYLVKVYNYMAMALGLTGIVAFFVASSPAVISMVYNTPLHWVIVFAPMGLVFLMSYKLNVLSFQAILMIFFSFAALVGVSISYVFLVYTAASIAKVFFISSSMFGVMAWYGNVTKKDLSQFGTFLFMGVIGIAIASLVNLFLGSGPLHFALSVVAVVVFTGMTAYDAQRIKDMYYKFNDGTDSSVNKMAILGATTLYFNYINIFISLLNLQGERK
>NZ_CP007478.1|WP_011452349.1|18247_19267_+|hypothetical-protein
MSVEGRMFGEDRRQLEQYEGISRGDIQRKLYNSMLLKLDRQDLIRKKIVMVTSVLYFVVFVSFAVMQSGVLDLTQNQLTLFANFMDYLALFLCVTFLIAGLYNVLYLEREKRKVNEKLKRISQDQFDERVNPTSIKFANFCETHANKFDLAGTFCTTIMQAIAVFSLTLPAIFDVSKIPVDTAFNLQGIVDTVGNILFTIAAGMFLCSYMIKCNKNKNKDGKSTYSVAQSLVLTSLFFGTFLILAGKVLLSFETRGGAMYTGVLGPLGMDAFPMALIVRAVGMAIFCFGYGLMLYMSTQQHDKLSNEVRNGLPKGASVNSNMQDVEQICCETRHLLQDS
>NZ_CP007478.1|WP_006010634.1|27854_28319_-|rRNA-maturation-RNase-YbeY
MIEINIYYRKWYNIINKPKSFIKKIINTSLIDLNIYEYKPTISVVLANNRLLQKLNYEYRKKNKPTNVLSFPYNKLNKYCYLGEIFVSLDTLINESTDLNIPIEHHTSHMLIHGLLHILDYNHEEPLEQYIMESIEIKLLDKLGIKNPYVPRET
>NZ_CP007478.1|WP_006010636.1|28315_28723_-|EVE-domain-containing-protein
MSYWLLKTEPQDFSWDDMVRDNVTVWDNVLNYQAQNYLKTMKYNDLAFFYHSGKEKGIIGIVSIDKEFYLPNTNNKFGVVEVKTHIKLNKTVFLKDIKSNPTLKTMLILKQPRLSVSQVTEQEWNCILHLGETIL
>NZ_CP007478.1|WP_044147492.1|28729_29995_-|cell-division-protein-FtsZ
MSLNICLPDQSLLRPRITVFGVGGAGGNAVNNMIQSNLHGVNFVVANTDAQALELSLSEKKIQLGIGLTKGLGAGSLPEVGRGAAEESINEIIEEISDSNMLFITAGMGGGTGTGAAPVIARVAKENKILTIGVVTKPFHFEGAHRMRTAEFGLEELQRYVDTLIVIPNQNLFRIANEKTTFADAFKLADTVLHTGVRGITDLMVMPGLINLDFADIRAIMSEMGKAMMGTGEAEGENRAIAAAEAAISNPLLDNISMKGAKGILINITGGLDMTLFEVDAAANRIREEVDSHANIIFGSTFNKESEGKIRVSVLATGIDNEEVVIQNKSALKDKEAHNDKLSETSSKPFNPLDNEIAYYKPSNPGEDMINSINHTKKQDHNIENQKSNNKIPESAYKMQFNKNEYWDEESFNIPTFLRKK
>NZ_CP007478.1|WP_044147496.1|30414_30960_+|hypothetical-protein
MNTDYDFCQVDFLIQQNGHSNIDVYHGKLHINAQGDEYYASGDIANDVTGDKGVINIINHGTNGVYGDVYCGKCDLQITLEHHDPATDIKNVTSINKTFLISILSGFDACLLVDEHNLLLTDPSKGAGVNDEPVVSILLHNGTDANMIRDSFNKDYKVFQDEGKTYKYVYVDQERMASIEK
>NZ_CP007478.1|WP_006010644.1|31410_33999_-|preprotein-translocase-subunit-SecA
MLSIAHKIFGSTNSRIIKSFHKVVQDINAIEHEIQLLSNEALKHKTIEFKEELKNGKTLDDILVPAFAVVREASKRVLNMRHFDVQLIGGIVLHKGMISEMKTGEGKTLVATLAAYLNALEGKGVHIVTVNDYLAKRDAEWMGELYSALGITVGCILTETNDLERKNAYNCDILYSTNNNLGFDYLRDNMKFSRDEMVQRGFNYAIVDEVDSILIDEARTPLIISGQVDQDIKMYKKIDNLIYELAEEDYELEEKNRNIFLTEAGITKIENLLIQHNLISSNTSLYDIDNIIIMHYITQALRAHKMFAVDKDYIIKDGNIVIIDEFTGRMMDGRRYSDGLHQALEAKEKLNINSENQTLASTTFQNYFRMYTKLSGMTGTAETESEEFLGIYNLQVVQIPTNIPVQRIDLNDDIYCTEEEKFNSVIKFISECHKKLQPVLVGTVSIEKSEMLSKLLTKNKLKHSVLNARYHEQEAYIIAQAGIPGTITIATNMAGRGTDIQLGGNLKMLAKTALANITDKEAIEIKYKQLTEKVNRDKEIAIQAGGLCVIGTERHESRRIDNQLRGRSGRQGDPGLSKFFLSLEDDLLRIFGSDKIKGVLQKLGMKKDEAIQHTWISRSIEKAQHKVESRNYDIRKSLLKFDNVINEQRKVVFDQRNKILDSDSYDISIIYRDLNSDIVNSIIHDKYYNLDDDTYKALSSEFTRIYNITLDYSTISNFESKDKVLEHLNETVDEHFAQKIEEFTLKDQKAWDHVVKKVMIMSLDYLWRDHLAALDSLKCGINLRSIAQKDPLNEFKAEAFSMLENMMSKFYELIIQRLSHLKFDIELNDTQRIEYNIHHSKISRNEKCPCGSGKKFKHCHGA
>NZ_CP007478.1|WP_006010646.1|34404_34833_-|hypothetical-protein
MDIFGNEFDVHVNANGTEYAGKMSIDSNGDFDVNLDLQDGVGTLGHLSGHISQSDDAANYIIEYIFDQCIIYPELPVLHSFNGQIVSPAEEGSIIFDNGDNIQISLHGLQEQPEEAIPAAEVEEAVPAEAAIPAAEVTENQQ
>NZ_CP007478.1|WP_155265762.1|35294_35660_-|hypothetical-protein
MNDLDLYNETNISTETADYSHLPTSHLMNALNHDCISRFEVKLSPTSVDNEYSVDFTFEQYKNNAEQDLLKLIVGEFGVNFDPEHHKLSLIDGDTSVILEEDMINSCLSCIKVVQKDHSAE
>NZ_CP007478.1|WP_044170816.1|36137_36974_+|P44/Msp2-family-outer-membrane-protein
MRYRISVIILMLLLVPCCCFSGSLDVSDSLNSRLKPVFLGISYKLSAPLFSSFSIGETYRINGVKTDRVVGLKSDILLDADKAMKDFNNFNFSEEYVPKYDNNIFGLSFIFGYSFRNLRVELEGSYKKFDVIDTKNHLVDNNYRHIALVRSNPPTLYDYFVLKNDGVEFYSTILNICYDFAVDTNIVPFSCVGIGEDIIKIFDSIRFKPSFNSKLGINYLMSQDMLLFFDVYYHRVVGNEYNNIPVQYVSLPNPLNISAAAKLDMEYFGAEIGIKVFV
>NZ_CP007478.1|WP_044170819.1|37146_37962_+|P44/Msp2-family-outer-membrane-protein
MNYKKFVVGVALATLLSFLPDNSFSDANIPEGRKGFYVGTQYKVGVPNFSNFSAEETLPGLTKKIFALGLDKSGISSHSNFTQAYNPTYASNFAGFGGVIGYYVNDFRVEFEGAYENFEPERQWYPEGGESHKFFALSRESTVQNNKFIVLENDGVIDRSLNVNFCYDIAHGSIPLAPYMCAGVGADYVKFLGISLPKFSYQVKFGVNYPVSVNVMLFGGGYYHKVIGNRYERVEIAYHPAGLSEHPKTTSASATLDTDYFGWEVGMRFTL
>NZ_CP007478.1|WP_044148288.1|38347_39178_-|P44/Msp2-family-outer-membrane-protein
MNYKKVFITSALISLISSLPGVSFSDPTGSGINGNFYISGKYMPSASHFGVFSAKEERNTTAGVFGLKQDWDGSAIPHTHSNTPFTVSNYSFKYENNPFLGFAGAIGYSMDGPRIELEVSYETFDVKNQGNNYKNEAHRYCALSRQATIAADNTFVFLKNEGLLDISFMLNACYDVISEGIPFSPYICAGIGTDLVSMFEVTNPKISYQGKLGLSYSISPETSVFVGGHFHKVMGNEFRDIPAIIPSGSSLTGNHPAIVTLDVCHFGIELGGRFAF

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Crispr_ID: NZ_CP007478_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP007478_2

1043468-1043605

Orphan

Consensus_repeat	Method
CGTGTAAATCAGAATTAGAAGATTGTTGTAGATCACTCTCCAATTGAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP007478_2

>merge|NZ_CP007478|2|1043468-1043605|CRISPRCasFinder
CGTGTAAATCAGAATTAGAAGATTGTTGTAGATCACTCTCCAATTGAACTTCTTCTTTAGAAGGATCAAATAACTCAACAGAAAAAGACCCGTGTAAATCAGAATTAGAAGATTGTTGTAGATCACTCTCTAATTGAA

>NZ_CP007478|2|2|1043468-1043605|CRISPRCasFinder
CGTGTAAATCAGAATTAGAAGATTGTTGTAGATCACTCTCCAATTGAA	CTTCTTCTTTAGAAGGATCAAATAACTCAACAGAAAAAGACC
CGTGTAAATCAGAATTAGAAGATTGTTGTAGATCACTCTCTAATTGAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP007478.1\|WP_006010162.1\|1040822_1041155_+\|preprotein-translocase-subunit-SecG	unknown	unknown	gnl\|CDD\|377143
NZ_CP007478.1\|WP_006010146.1\|1049164_1049545_-\|MerR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|133393
NZ_CP007478.1\|WP_006010126.1\|1039598_1040528_-\|tyrosine-recombinase	unknown	unknown	gnl\|CDD\|234713
NZ_CP007478.1\|WP_006010140.1\|1045816_1046818_+\|tryptophan--tRNA-ligase	unknown	unknown	gnl\|CDD\|234866
NZ_CP007478.1\|WP_006010137.1\|1045048_1045660_+\|nucleotide-exchange-factor-GrpE	unknown	unknown	gnl\|CDD\|366423
NZ_CP007478.1\|WP_006010150.1\|1050720_1051224_+\|5-(carboxyamino)imidazole-ribonucleotide-mutase	unknown	unknown	gnl\|CDD\|376377
NZ_CP007478.1\|WP_006010152.1\|1051411_1052827_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223021
NZ_CP007478.1\|WP_044170981.1\|1047552_1048437_-\|TRP47-family-tandem-repeat-effector	unknown	unknown	gnl\|CDD\|380243
NZ_CP007478.1\|WP_011452440.1\|1035985_1038262_-\|NADP-dependent-malic-enzyme	unknown	unknown	gnl\|CDD\|235976
NZ_CP007478.1\|WP_006010529.1\|1028864_1029176_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007478.1\|WP_006010128.1\|1041160_1042759_+\|CTP-synthase	unknown	unknown	gnl\|CDD\|235437
NZ_CP007478.1\|WP_006010526.1\|1033168_1035811_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379224
NZ_CP007478.1\|WP_006010524.1\|1029454_1030930_-\|cation:proton-antiporter	unknown	unknown	gnl\|CDD\|183662
NZ_CP007478.1\|WP_006010124.1\|1038551_1039259_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213222
NZ_CP007478.1\|WP_006010148.1\|1049556_1049859_-\|integration-host-factor-subunit-alpha	unknown	unknown	gnl\|CDD\|259857
NZ_CP007478.1\|WP_006010160.1\|1050185_1050734_+\|redoxin-domain-containing-protein	unknown	unknown	gnl\|CDD\|379658
NZ_CP007478.1\|WP_006010523.1\|1028092_1028542_+\|outer-membrane-lipid-asymmetry-maintenance-protein-MlaD	unknown	unknown	gnl\|CDD\|275223
NZ_CP007478.1\|WP_011452436.1\|1052903_1054226_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007478.1\|WP_006010135.1\|1043858_1044941_-\|bifunctional-diaminohydroxyphosphoribosylaminopyrimidine-deaminase/5-amino-6-(5-phosphoribosylamino)uracil-reductase-RibD	unknown	unknown	gnl\|CDD\|273015
NZ_CP007478.1\|WP_006010525.1\|1031503_1033009_+\|apolipoprotein-N-acyltransferase	unknown	unknown	gnl\|CDD\|234721

Protein	Function_ID	Function_description	E-value
NZ_CP007478.1\|WP_006010162.1\|1040822_1041155_+\|preprotein-translocase-subunit-SecG	gnl\|CDD\|377143	pfam03840, SecG, Preprotein translocase SecG subunit.	1.97734e-14
NZ_CP007478.1\|WP_006010152.1\|1051411_1052827_-\|hypothetical-protein	gnl\|CDD\|223021	PHA03247, PHA03247, large tegument protein UL36; Provisional.	0.0002293
NZ_CP007478.1\|WP_006010126.1\|1039598_1040528_-\|tyrosine-recombinase	gnl\|CDD\|234713	PRK00283, xerD, tyrosine recombinase.	1.59539e-105
NZ_CP007478.1\|WP_006010140.1\|1045816_1046818_+\|tryptophan--tRNA-ligase	gnl\|CDD\|234866	PRK00927, PRK00927, tryptophanyl-tRNA synthetase; Reviewed.	1.67744e-177
NZ_CP007478.1\|WP_006010137.1\|1045048_1045660_+\|nucleotide-exchange-factor-GrpE	gnl\|CDD\|366423	pfam01025, GrpE, GrpE.	6.49567e-49
NZ_CP007478.1\|WP_006010150.1\|1050720_1051224_+\|5-(carboxyamino)imidazole-ribonucleotide-mutase	gnl\|CDD\|376377	pfam00731, AIRC, AIR carboxylase. Members of this family catalyze the decarboxylation of 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR). This family catalyze the sixth step of de novo purine biosynthesis. Some members of this family contain two copies of this domain.	1.29575e-82
NZ_CP007478.1\|WP_044170981.1\|1047552_1048437_-\|TRP47-family-tandem-repeat-effector	gnl\|CDD\|380243	NF033393, TRP47_fam_Nterm, TRP47 family tandem repeat effector. This HMM describes a conserved N-terminal domain of a family of proteins found, so far, only in the genus Ehrlichia. The repeat region is followed by a long repeat region with a large content of acidic and serine residues, but other than in composition, the repeats themselves may be unrelated from one lineage to another. Characterized examples, such as TRP47 from Ehrlichia chaffeensis, are glycoproteins and are immunodominant antigens.	1.24534e-60
NZ_CP007478.1\|WP_011452440.1\|1035985_1038262_-\|NADP-dependent-malic-enzyme	gnl\|CDD\|235976	PRK07232, PRK07232, bifunctional malic enzyme oxidoreductase/phosphotransacetylase; Reviewed.	0
NZ_CP007478.1\|WP_006010146.1\|1049164_1049545_-\|MerR-family-transcriptional-regulator	gnl\|CDD\|133393	cd04765, HTH_MlrA-like_sg2, Helix-Turn-Helix DNA binding domain of putative MlrA-like transcription regulators. Putative helix-turn-helix (HTH) MlrA-like transcription regulators (subgroup 2), N-terminal domain. The MlrA protein, also known as YehV, has been shown to control cell-cell aggregation by co-regulating the expression of curli and extracellular matrix production in Escherichia coli and Salmonella typhimurium. These proteins belong to the MerR superfamily of transcription regulators that promote expression of several stress regulon genes by reconfiguring the spacer between the -35 and -10 promoter elements. Their conserved N-terminal domains contain predicted HTH motifs that mediate DNA binding, while the dissimilar C-terminal domains bind specific coactivator molecules.	3.44647e-35
NZ_CP007478.1\|WP_006010128.1\|1041160_1042759_+\|CTP-synthase	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
NZ_CP007478.1\|WP_006010526.1\|1033168_1035811_-\|hypothetical-protein	gnl\|CDD\|379224	pfam13502, AsmA_2, AsmA-like C-terminal region. This family is similar to the C-terminal of the AsmA protein of E. coli.	2.20917e-06
NZ_CP007478.1\|WP_006010524.1\|1029454_1030930_-\|cation:proton-antiporter	gnl\|CDD\|183662	PRK12662, PRK12662, putative monovalent cation/H+ antiporter subunit D; Reviewed.	0
NZ_CP007478.1\|WP_006010124.1\|1038551_1039259_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|213222	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein. This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of lipoproteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyzes the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.	5.86942e-92
NZ_CP007478.1\|WP_006010148.1\|1049556_1049859_-\|integration-host-factor-subunit-alpha	gnl\|CDD\|259857	cd13835, IHF_A, Alpha subunit of integration host factor (IHFA). This subfamily consists of the alpha subunit of integration host factor (IHF) and IHF-like domains. IHF is a nucleoid-associated protein (NAP) that binds and sharply bends many DNA targets in a sequence specific manner. It is a heterodimeric protein composed of two highly homologous subunits IHFA (IHF-alpha) and IHFB (IHF-beta). It is known to act as a transcription factor at many gene regulatory regions in E. coli. IHF is an essential cofactor in phage lambda site-specific recombination, having an architectural role during assembly of specialized nucleoprotein structures (snups). IHF is also involved in formation as well as maintenance of bacterial biofilms since it is found in complex with extracellular DNA (eDNA) within the extracellular polymeric substances (EPS) matrix of many biofilms.	1.38767e-33
NZ_CP007478.1\|WP_006010160.1\|1050185_1050734_+\|redoxin-domain-containing-protein	gnl\|CDD\|379658	pfam14595, Thioredoxin_9, Thioredoxin.	8.71889e-05
NZ_CP007478.1\|WP_006010523.1\|1028092_1028542_+\|outer-membrane-lipid-asymmetry-maintenance-protein-MlaD	gnl\|CDD\|275223	TIGR04430, OM_asym_MlaD, outer membrane lipid asymmetry maintenance protein MlaD. Members of this protein family are the MlaD (maintenance of Lipid Asymmetry D) protein of an ABC transport system that seems to remove phospholipid from the outer leaflet of the Gram-negative bacterial outer membrane (OM), leaving only lipopolysaccharide in the outer leaflet. The Mla locus has long been associated with toluene tolerance, consistent with the proposed role in retrograde transport of phospholipid and therefore with maintaining the integrity of the OM as a protective barrier.	1.10754e-53
NZ_CP007478.1\|WP_006010135.1\|1043858_1044941_-\|bifunctional-diaminohydroxyphosphoribosylaminopyrimidine-deaminase/5-amino-6-(5-phosphoribosylamino)uracil-reductase-RibD	gnl\|CDD\|273015	TIGR00326, eubact_ribD, riboflavin biosynthesis protein RibD. This model describes the ribD protein as found in Escherichia coli. The N-terminal domain includes the conserved zinc-binding site region captured in the model dCMP_cyt_deam and shared by proteins such as cytosine deaminase, mammalian apolipoprotein B mRNA editing protein, blasticidin-S deaminase, and Bacillus subtilis competence protein comEB. The C-terminal domain is homologous to the full length of yeast HTP reductase, a protein required for riboflavin biosynthesis. A number of archaeal proteins believed related to riboflavin biosynthesis contain only this C-terminal domain and are not found as full-length matches to this model. [Biosynthesis of cofactors, prosthetic groups, and carriers, Riboflavin, FMN, and FAD].	2.64582e-98
NZ_CP007478.1\|WP_006010525.1\|1031503_1033009_+\|apolipoprotein-N-acyltransferase	gnl\|CDD\|234721	PRK00302, lnt, apolipoprotein N-acyltransferase; Reviewed.	4.64248e-108

>NZ_CP007478.1|WP_006010128.1|1041160_1042759_+|CTP-synthase
MNQASTRFIFVTGGVVSSLGKGLAAASIGALLQARGFKICLRKLDPYLNIDPGTMSPIQHGEVFVTDDGAETDLDLGHYERFTGVKTTKNDNITTGKVYHNLLKKERRGDYLGQTVQIIPHVTDLINSFILHDTDKLDFVICEIGGTVGDIESQPFLESIRQIGYKLSKNNTIFVHLTLVPYIDAAMELKTKPTQHSVKELSSVGIQPDIILYRSKIPLSKEQRDKIANLCNVSSTNIIPALDVKNIYELPISYHNYNLDTQILNHFNIDSPEPDLRKWENILNISHAVTKTVNVAIIGKYIKLLDAYKSLIEALEHASIHNKVKLSIKWIDSRSLDSNEINIFDKVDSILIPGGFGDDGIQGKMTAITYARLNKIPFLGICMGMQLAIIEFANNVAHLEDANSTEFNLYCKNPVIHQLPELQQNFLGGSMKLGSCPCYLESGSKIFSIYQQSIIHERRRHRYAFNLQYKDLLEQHGLIFTGKSNNNNDSLIEVIELKDHPWFIGVQFHPEFKSSPFHSHPLFISFIKASLD
>NZ_CP007478.1|WP_006010162.1|1040822_1041155_+|preprotein-translocase-subunit-SecG
MVLTVIQLVLVFFLVILILLQPPESDNLSGFGSTQSNLDSMFTTGSSSNFITKLTVIIATAFIINTVLLVGINAKSVHKESIVKKIAEMSKAHNLPPMEHNNEDSVPFNQ
>NZ_CP007478.1|WP_006010126.1|1039598_1040528_-|tyrosine-recombinase
MDNQRYVNIFLEAIVAEKHVSHNTYQSYRTDLLGLCKFIDRNDLLLTDASIHELQDYIRFLYEKGYKANTVSRKISAIKNLYGFLYRDNIIENDPTVYLDSPKLSRSLPKTLSYEEVNILLDVAALDVSPDGRRINAIVNILYSSGIRISELVYLKFREVREALDDGDTEICHMKIQGKAKKERIILLNSSAVTSIQKYMEVYEYFIPNGYKMSQWLFPGTKFDNPVTRQRVGQLLKNLAMNAGINVTHVSPHKLRHSFATHLLNNGSDIVFIQKMLGHANLATTQIYTHVASERLKSILLKFHPLRNK
>NZ_CP007478.1|WP_006010124.1|1038551_1039259_+|ABC-transporter-ATP-binding-protein
MSTVFALANIYKSFGRNKEVPVIVNATLQIKKGEIVALIGKSGSGKSTLLHIAGLLDTPSSGSILLNNIECTDKTSDKDKTYLRRHFLGFIYQFHHLLQEFSVLENVMLPQIITGKSKSIAKKNAMEILERVRLQDKLSMPISQLSGGERQRVAIARSLINCPLIVLADEPTGSLDNNTALEVFSLLQEYAKEKNIAILLATHNYSLAQKACRIVKIDSGILRSYSIDESGFNKI
>NZ_CP007478.1|WP_011452440.1|1035985_1038262_-|NADP-dependent-malic-enzyme
MVDLENNGFDEKRKEALEFHCKDLKPGKVSLLPTKPLLTQRDLSLAYSPGVAVPCLEIARNPDLVYEYTARGNYVAVISNGTAVLGLGNIGPLASKPVMEGKAVLFKRFADIDAVDIEVNTSDVDEFVNTVKYLGLSWGGINLEDIKAPECFIIEKRLSEIMDIPVFHDDQHGTAIIVAAGLINALDITGKSFKDVKIVINGAGAAGIACLEMIKLIGVPAENITLCDQNGVIYKGRQLGMNEWKEKHAIETENRSLKDALIMADVFLGLSVKDVLSKDMLLSMNRDPVIFALANPDPEINPNVAHEIRPDAIIATGRSDYNNQINNVMGFPYIFRGALDVRAKSVNNEMKIAAANAIAMLAREYVSDEVSDAYGGRKMNYGKDYIIPTPFDPRLITVVSPAVAKAAIDSGVARKNIENWDEYTKQLASRLSLTSNILSMMYSAVKCDPKRVIFSEGEEEKVIEAAVQWRNQEYGLPILVGRIDKVQEAFDRLGIKDTKGIEIANAAISQRNNEYTDYLYKKLQREGYLYRSCVRDVKTDRNVFAACMLACGDGDVLITGMTRGYYASINDVQKVIGSQGVVFGLSIIVMKERTIFVADTAIHESPTPEQIAEIAIQASVQAKKMGYEPRVSFISSSNFGSHSQEDAKKMRQAIKILDSYNVSFEYDGEMSVDTALNPELLTLYPFCKLTGEANVLVMPTLHSASISSKLLQRAAGVSVIGPILIGMEKPVQIVQMSSSVSEILNLTVLASLVNNTNF
>NZ_CP007478.1|WP_006010526.1|1033168_1035811_-|hypothetical-protein
MRLLIYSGGTILVFLLFLIISPFFINWNSYYASHVLKQIEDISGDVSVKGVGKVTGRLILPKIVINNLYIEGHGNELLNHKSTILISRLELKISLLSLLLFSPKVNAITIDGLNIPLGNLLDLFSSFQSKNFNIKTFNVFNSVVNTSYDGTSFNSKPISIKSGTIKTVSDMKVINGLLSIGKNDYNVVADISLNEEHRINANIYSQSTKVTLSGVAAGNAFDGVILTNGSDFSQFINDISETNKTSIFSFINSHEEFSLSTNIKLLDKTFELNDFKLSTDSMEGIGKVICSNYASCSANIDFSRIDVDRLYGVKHESDVYRKDSRTLDYLNTLISENLNYNIKASAKEIKYHDQVSSNLIMDLEVSKGKISINQMTIMLPGNNNVLHVEGNVGSNDLISSFHGKLKINGDDFCSFAKWLFPIQVESKSSDKFSIQSDLYVAPRVFSLSHIEVLTDSFGDVKGQLRIKYDRKGSAVVGDIEIHNIDFDQYKINEKLKIEDFMPMKWLKDIKYKINVDTNISDFIIQKQQVSNLSFLVNVMQSKFAIDKIRFNGADGSDLSGFIKAYIGSQDLKPKILVSLKGNKYNTAFIKFPSLIRYVLDGSNKVTNIKWSNEDLKFYGLEHVDGNIDINIKNFISKDNSLKDFVLSSSLKDNLMSVNKLMFKVDDGFVSASGKIGMGSNTYSLSAVLSIANIGLNNLLKHINVDGITGNVSISGSVQTQGKTLVDWINALDGKMEVVAKGVNVVGVDFNKFIISLLDVQSKSDVAALTQIGLYENNTVFNFISAGANIRRGNIISSLQFAIDNASGMASANISLLQFAVMSKIRLSFIRPNVSSPSNVDMSLNGQLWQPRINFNVNALYEEIVKGGSQSVSAHDEEFID
>NZ_CP007478.1|WP_006010525.1|1031503_1033009_+|apolipoprotein-N-acyltransferase
MIEGDFYRKYNYTLAMILGVAGAISMAPFHMFIALLIAFSGFYIVLSQVKNTRQAFFCGWWFGFGYFTASSYWVNVPLIIQSKIFWPLIPLTLILSASLSLLFAAAAAISYTLNYKKLFGLITFSLSFTIASMLLGYIVPWNLFAYSWSFSIEMLQTASLIGTYGMEFLAIFCSTAAGVSIRDKSTLPCITALLILVSMFIYGNDRLSNNQEQKYNQKIAIRIVQGNTESHWDGNEEQEYDRFQTYLRLTSKYGLNSRTHVVWGENSFPFLTDTNSRSVQNYLKFIIPGFLIAGGTRFENNKFHNTLFVINDNGQIIDFYDKLHLVPFGEFIPSILKNLIPKSIANRLNYSPGTNKEKSISLNNQSPFIPLICYESIFSNEVTSRCTKGQWIINITNDGWFGISSQPYQHLEINRVRSIENGLPTIRAANNGISAVIDSYGRIINSLPIMTEGIIDSYLPYHISEGTIYSKHLNKFITIQFAIPIMLILVLLRFILSKFTS
>NZ_CP007478.1|WP_006010524.1|1029454_1030930_-|cation:proton-antiporter
MISSLPVLQVVIPLLSAIGCALLKDARLVKIISAIVVLISSAIAVVLFFQVYHGGVIKYSIGGWIVPYGIELKVNVFNSMMLVLVGFVAMMSIVYGIYPNTKEINVRTIPSFYSVFLLCFSGFLGILVSNDVFNIYVFLEISSISSYILVAMGNNRNALIAAFDYLVIGTIGATFYLIGVGFLYAITGTLNVGNLFLIVQDKSLTTNRAIQVGLLFIMLGLFIKAALFPFHKWLIQAYNYAPTFISVFFSGVSTKVMIYLIIKVIYDVFKAELVLLTLPFNIVFMSFAALSVISASILAMLSSNMKRIFAYSSVAHLGYIIFAVGLNTYYGLVAAVTYIINHSLVKSALFMVMGSISYNCGSLELKDCTNIWKNMPKIALPFVILCISLIGMPITSGFISKWYVFDAAIKTNFWLGVIVLLIGSGLSVVYVWNIIEATCFKPSDKQVKKLFEVPNVMVLCIWVMAISSIILGLYPVPLMMISNKIAESLLY
>NZ_CP007478.1|WP_006010529.1|1028864_1029176_+|hypothetical-protein
MVMSYFDYILSYIINNPKYTALLVLVLLAGIAYLFKRKKSKSKYKKSTTSYTNNNSSSSTFTPKPHNKNYIPEHSTQHSQGSNFFVVESVSQVFESKMQGRSR
>NZ_CP007478.1|WP_006010523.1|1028092_1028542_+|outer-membrane-lipid-asymmetry-maintenance-protein-MlaD
MRRSNVIEIFAGLIVLVAAVSIGIIAFKKLPLNTTSHNCYIVKAHFPSVDGLDIGDDITLSGVKIGTVTSISLDKNYSPTVTMCIQKNILLPSDSSASLSLSNLLGRRHIDIALGSNEDVIPVEGFIEHTSSDLNLNVILTKLVNKFVK
>NZ_CP007478.1|WP_006010135.1|1043858_1044941_-|bifunctional-diaminohydroxyphosphoribosylaminopyrimidine-deaminase/5-amino-6-(5-phosphoribosylamino)uracil-reductase-RibD
MIRYDKKFMSLALRIARRGLGNVFPNPAVGCIVVNHGMVVGRGYTQVGGRPHAEVIALNNAGHLAKGSTVYVTLEPCSHYGQTGPCALKLIDAGVKRMVIAAKDPDVRVSGNGIELLRNAGIDVKCGVMYEEARELNIGFFYSKIKNRPFITVKLASTLDGKIALKDGNSRWITNELTRNWVHKQRSMYDAIMVGSNTIVQDNPMLNTRLPGLECYSPVRIVIDRFGKVCDYHNIIKTSDVIPTYILTNDVPQTKLGKASCLVVDDKDNFLRSAMKMLSVKIGITRLFVEGGGVLITELLKNQLIDRIIWCRSNKIFGNDAIPSIGDLDILTLQCGYNFRAVDTLYFKDDIVEILEHCTE
>NZ_CP007478.1|WP_006010137.1|1045048_1045660_+|nucleotide-exchange-factor-GrpE
MSDNGDNNTKSPQHNNPQPNEKSDGKVQPGQPQVNPQRKFTAGINKKKEKLNEDLSELDKLRQQLIHFQNQFRLAVADKENVKRIMQKNIDDTSIYAISNFARDLLSSCDNLETSLKNLKEGDSIHAGVLMTYKELLNTLERHNITRIDPIGEKFNPQFHKAVSQMVDAEKDDNTILHVVQPGYIIKDKLLRAASVIISKKSD
>NZ_CP007478.1|WP_006010140.1|1045816_1046818_+|tryptophan--tRNA-ligase
MSIPIVLSGIQPSGGIHLGNYLGSIRNWVSLQSSYKCFFFLADLHTLTSNNYNSAELKQNSINTLATYLACGIDPNKSVLFVQSSIHAHAELLWIFSCITSTGQLNRMTQFKEKSRNKVSTACLGLYSYPVLMAADILIYKANIVPVGIDQKQHLELTRDIAMNFNSTYNTQYFQIPEPLIMQESAKIMNLRNGKKKMSKSDSSDYTRINLYDSNDVISKKISKATTDSIVGFNFSTLDSRPEVKNLVSIYATLLNINIEQACTNIENFSTKQFKEQLTELLIDNIAPIRHKVTEFLEDKEHLHNIIVSGNNKAASIANKHILEIKEIIGCWS
>NZ_CP007478.1|WP_044170981.1|1047552_1048437_-|TRP47-family-tandem-repeat-effector
MLHLTTEINDIDFSNNLNIYSGNRFVVTSGDMQVDVGSEPDHGYHILFKNNGHVISDFHGVQAENFVFDIKNHNLRASFLVDPMAPFTELDNSQHPHFVVNMHTANECGSDCVHHNEHDHDAHGRGAASSVAEGVGSAISQILSLSDSIVVPVLEGNASEPVVSQEAAPVSESGDAANPVSSSENASEGNASEPVVNQEAAPVSESGDTANPVSSSENASEGNASEPVVSQEAAPVSESGDAANPVSSSENASEGNASEPVVSQETPATQPQSRDSLLNEEDMAAQFGNRYFYF
>NZ_CP007478.1|WP_006010146.1|1049164_1049545_-|MerR-family-transcriptional-regulator
MGEKKILHDEYSSKLKTIGEVAKDLDVEQYVLRFWEEKFPQVNPIKRRGRRLYSQVDVDTLKHIKHLLYDKGYKIKGVQQELGRKPANINKHTNDTEQSVYRKDLISLLDDMLSLRDSLLKKFNGM
>NZ_CP007478.1|WP_006010148.1|1049556_1049859_-|integration-host-factor-subunit-alpha
MTQTLTKSKIAEVINRDVGLSREDASSVVGEILDEMLNALVKDRILKISSFGTFKSYKKKARMGRNPKTSEEFVIKERYTVSFYPSILIKHSINSDDSTE
>NZ_CP007478.1|WP_006010160.1|1050185_1050734_+|redoxin-domain-containing-protein
MNNKHFIFFTCIIFLFILLTINKISSYYQIQRNMPDTLLQIKEINSDKALSEMFTIKDSKVNILVIYTSWCSSCIKKLPEINKVIANNENIHPIIISLDENKNKLLSFLSKQGTLYFTPYNVPPNHMKKLLSHLTNKGITFDHHIPYIAVLYNGMNPITNINSVSQLKSTIKDIIEKYHVNQ
>NZ_CP007478.1|WP_006010150.1|1050720_1051224_+|5-(carboxyamino)imidazole-ribonucleotide-mutase
MSTNKNIADVAVIMGSQSDFSTMNNSISILKELNITHEVMIISAHRTPERLYTFAKSAEDNGFKVIIAGAGGAAHLPGLVASLTHIPVIGVPVKSSNLNGIDSLLSIVQMPKGIPVATMSIGSSGGYNAAIMAASILSLENDEIRKNLKIWRKNLSDSVKLIPDIPL
>NZ_CP007478.1|WP_006010152.1|1051411_1052827_-|hypothetical-protein
MLIDQKFQHLSQAFNSYSTLYQRNKLKSKYNFLLGSSIYLTALVSVFSIVALYHHSGCFNSIFSGKDKLFGGNIPVVFSIALIVAIPSFILLFFLIYKICATQDITDHVVERTNGLIGSAREVCEFLKEKLHENTCQVEALVGHYGSLAAKHDDFVKKCSRCLQSLEEQQVALGALVRRSTSVVDNNISKVQALVVDLKAKISEMSVAHVKLMDASEDVREFIVKQLRLEGLGLQHRMRFLDGLQGTLSQNIDVSDAKSAMKIIIERIENEIPKVRFAFNSLNSMLWSLHSHLLKALLGLDKDSSTDGCITVCQELVNALHKFLGDMRAKIDNYNGSDKRQFVNIGLVEVPLLQIMILRLMATKRACMFEDVCASVKDFIESGTADRSSSTGTKVIPDSAASAAAPVTPTTPAASVTPTASATPATPAAGTNDGAEFATPPMGTTDAPSVEDLSALGAVGGVDPNAHTHTP
>NZ_CP007478.1|WP_011452436.1|1052903_1054226_-|hypothetical-protein
MIGGNTQTPNDYVPIRRHQLSHNSIKSLTKKLFLLNTSIGIVSVIHASFLIMLFDAMCLQKKPKHTILTLAALIAVISVVSLLLFYVRYTVSKKNKRHLESMHANAESFVSLLQDRQLLDNLSHKVHHLQHLAHELESIDEKGVFIEHASQRISASRVDVEKQLRNFVKHCEDDISKMYRELEGVTVDMSEVSGILLNPSFFKENEAGLMSLSERRKLMSQKEHEINLLMKGYCSEILAKIVCIIEMMKLHQSSSVENKKVSLFSEDDSKVKELIRILVNTKCVLEELDGEEIKYPTFEMLCNVMWNIGSFLSSMRCMAKESVYKKAENLIQEKGKQVQRFISGILSAVRKLDVVKQEQGSEATSSEHTMSEEDSIVALRLVQLQSIILKLLFIMQRNKSYDIHTETCSENSNGPIDSEENPDFAVQNLQSVSCSGIMLT

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage